SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    941401 9jf5:A (1.9) BS01 AG2 N/A GO:0004609 ... Q2UAM5 39321488
    941402 9jf5:B (1.9) BS01 AG2 N/A GO:0004609 ... Q2UAM5 39321488
    941403 9jf5:C (1.9) BS01 AG2 N/A GO:0004609 ... Q2UAM5 39321488
    941404 9jf5:D (1.9) BS01 AG2 N/A GO:0004609 ... Q2UAM5 39321488
    941405 9jf8:A (3.05) BS01 PO4 N/A N/A Q93ZF5 39838070
    941406 9jff:A (2.15) BS01 33P N/A GO:0009236 ... A0A499W357 39366178
    941407 9jfn:A (2.15) BS01 AG2 N/A GO:0004609 ... Q2UAM5 39321488
    941408 9jfn:B (2.15) BS01 AG2 N/A GO:0004609 ... Q2UAM5 39321488
    941409 9jfn:C (2.15) BS01 AG2 N/A GO:0004609 ... Q2UAM5 39321488
    941410 9jfn:D (2.15) BS01 AG2 N/A GO:0004609 ... Q2UAM5 39321488
    941411 9jha:A (1.7) BS01 A1EB6 N/A N/A P0A3G3 N/A
    941412 9jhe:A (2.55) BS01 NAD N/A GO:0006635 ... C7H5K9 39409040
    941413 9jhe:B (2.55) BS01 NAD N/A GO:0006635 ... C7H5K9 39409040
    941414 9jhe:C (2.55) BS01 NAD N/A GO:0006635 ... C7H5K9 39409040
    941415 9jhe:D (2.55) BS01 NAD N/A GO:0006635 ... C7H5K9 39409040
    941416 9jhe:E (2.55) BS01 NAD N/A GO:0006635 ... C7H5K9 39409040
    941417 9jhe:F (2.55) BS01 NAD N/A GO:0006635 ... C7H5K9 39409040
    941418 9jhv:A (1.65) BS01 MTA N/A GO:0003824 ... Q9YAQ8 N/A
    941419 9jhx:A (2.86) BS01 DST N/A N/A N/A 39747040
    941420 9jhx:B (2.86) BS01 DST N/A N/A N/A 39747040
    941421 9jhx:C (2.86) BS01 DST N/A N/A N/A 39747040
    941422 9jhx:D (2.86) BS01 DST N/A N/A N/A 39747040
    941423 9jhy:B (1.9) BS01 CAA N/A GO:0006635 ... C7H5K9 39409040
    941424 9jhz:B (2.2) BS01 CAA N/A GO:0006635 ... C7H5K9 39409040
    941425 9jhz:B (2.2) BS02 NAD N/A GO:0006635 ... C7H5K9 39409040
    941426 9jiq:A (1.78) BS01 A1L36 N/A N/A P02766 39761163
    941427 9jiq:A (1.78) BS02 A1L36 N/A N/A P02766 39761163
    941428 9jiq:B (1.78) BS01 A1L36 N/A N/A P02766 39761163
    941429 9jiq:B (1.78) BS02 A1L36 N/A N/A P02766 39761163
    941430 9jir:A (1.3) BS01 A1L37 N/A N/A P02766 39761163
    941431 9jir:A (1.3) BS02 A1L37 N/A N/A P02766 39761163
    941432 9jir:B (1.3) BS01 A1L37 N/A N/A P02766 39761163
    941433 9jis:A (1.41) BS01 A1L38 N/A N/A P02766 39761163
    941434 9jis:B (1.41) BS01 A1L38 N/A N/A P02766 39761163
    941435 9jj7:A (1.8) BS01 peptide N/A N/A P0DTD1 N/A
    941436 9jje:A (2.52) BS01 CA N/A GO:0005262 ... A7T1N0 39514307
    941437 9jje:A (2.52) BS02 A2R N/A GO:0005262 ... A7T1N0 39514307
    941438 9jje:B (2.52) BS01 CA N/A GO:0005262 ... A7T1N0 39514307
    941439 9jje:B (2.52) BS02 A2R N/A GO:0005262 ... A7T1N0 39514307
    941440 9jje:C (2.52) BS01 CA N/A GO:0005262 ... A7T1N0 39514307
    941441 9jje:C (2.52) BS02 A2R N/A GO:0005262 ... A7T1N0 39514307
    941442 9jje:D (2.52) BS01 CA N/A GO:0005262 ... A7T1N0 39514307
    941443 9jje:D (2.52) BS02 A2R N/A GO:0005262 ... A7T1N0 39514307
    941444 9jjf:A (2.65) BS01 CA N/A GO:0005262 ... A7T1N0 39514307
    941445 9jjf:A (2.65) BS02 A2R N/A GO:0005262 ... A7T1N0 39514307
    941446 9jkb:A (3.93) BS01 peptide N/A GO:0000082 ... Q13616 39406020
    941447 9jkp:B (2.76) BS01 GDP N/A GO:0000028 ... Q2FY06 39432921
    941448 9jkq:R (2.66) BS01 B40 N/A GO:0001594 ... P0ABE7
    Q96RJ0
    39358311
    941449 9jm0:A (2.7) BS01 dna N/A GO:0003720 ... P23070 39395169
    941450 9jm0:A (2.7) BS02 rna N/A GO:0003720 ... P23070 39395169
    941451 9jm0:A (2.7) BS03 rna N/A GO:0003720 ... P23070 39395169
    941452 9jm0:A (2.7) BS04 dna N/A GO:0003720 ... P23070 39395169
    941453 9jm0:B (2.7) BS01 dna N/A GO:0003720 ... P23070 39395169
    941454 9jm0:B (2.7) BS02 dna N/A GO:0003720 ... P23070 39395169
    941455 9jm0:B (2.7) BS03 rna N/A GO:0003720 ... P23070 39395169
    941456 9jm0:B (2.7) BS04 rna N/A GO:0003720 ... P23070 39395169
    941457 9jm0:C (2.7) BS01 dna N/A GO:0051607 ... P0DV88 39395169
    941458 9jm0:C (2.7) BS02 rna N/A GO:0051607 ... P0DV88 39395169
    941459 9jm0:J (2.7) BS01 dna N/A GO:0051607 ... P0DV88 39395169
    941460 9jm0:J (2.7) BS02 rna N/A GO:0051607 ... P0DV88 39395169
    941461 9jm0:J (2.7) BS03 NCA N/A GO:0051607 ... P0DV88 39395169
    941462 9jm0:J (2.7) BS04 AR6 N/A GO:0051607 ... P0DV88 39395169
    941463 9jm0:K (2.7) BS01 dna N/A GO:0003720 ... P23070 39395169
    941464 9jm0:K (2.7) BS02 rna N/A GO:0003720 ... P23070 39395169
    941465 9jm0:K (2.7) BS03 dna N/A GO:0003720 ... P23070 39395169
    941466 9jm0:L (2.7) BS01 dna N/A GO:0051607 ... P0DV88 39395169
    941467 9jm0:L (2.7) BS02 rna N/A GO:0051607 ... P0DV88 39395169
    941468 9jm0:P (2.7) BS01 dna N/A GO:0003720 ... P23070 39395169
    941469 9jm0:P (2.7) BS02 dna N/A GO:0003720 ... P23070 39395169
    941470 9jm0:P (2.7) BS03 rna N/A GO:0003720 ... P23070 39395169
    941471 9jm0:T (2.7) BS01 rna N/A GO:0051607 ... P0DV88 39395169
    941472 9jm0:T (2.7) BS02 dna N/A GO:0051607 ... P0DV88 39395169
    941473 9jm0:T (2.7) BS03 rna N/A GO:0051607 ... P0DV88 39395169
    941474 9jm0:T (2.7) BS04 AR6 N/A GO:0051607 ... P0DV88 39395169
    941475 9jma:A (2.2) BS01 UDP N/A N/A A0A1D2IE05 N/A
    941476 9jma:B (2.2) BS01 UDP N/A N/A A0A1D2IE05 N/A
    941477 9jmz:A (2.91) BS01 SIA N/A N/A N/A 39848246
    941478 9jmz:B (2.91) BS01 SIA N/A N/A N/A 39848246
    941479 9jmz:C (2.91) BS01 SIA N/A N/A N/A 39848246
    941480 9jn0:A (2.84) BS01 SIA N/A N/A N/A 39848246
    941481 9jn0:B (2.84) BS01 SIA N/A N/A N/A 39848246
    941482 9jn0:C (2.84) BS01 SIA N/A N/A N/A 39848246
    941483 9jn3:A (2.4) BS01 UPG N/A N/A A0A1D2IE05 N/A
    941484 9jn3:A (2.4) BS02 RAB N/A N/A A0A1D2IE05 N/A
    941485 9jn3:B (2.4) BS01 UPG N/A N/A A0A1D2IE05 N/A
    941486 9jn3:B (2.4) BS02 RAB N/A N/A A0A1D2IE05 N/A
    941487 9jn4:A (1.81) BS01 HEM N/A N/A A8CF72 N/A
    941488 9jn4:B (1.81) BS01 HEM N/A N/A A8CF72 N/A
    941489 9jn4:C (1.81) BS01 HEM N/A N/A A8CF72 N/A
    941490 9jn4:D (1.81) BS01 HEM N/A N/A A8CF72 N/A
    941491 9jn5:A (2.0) BS01 HEM N/A N/A A8CF72 N/A
    941492 9jn5:A (2.0) BS02 HEM N/A N/A A8CF72 N/A
    941493 9jn5:B (2.0) BS01 HEM N/A N/A A8CF72 N/A
    941494 9jn5:C (2.0) BS01 HEM N/A N/A A8CF72 N/A
    941495 9jn5:D (2.0) BS01 HEM N/A N/A A8CF72 N/A
    941496 9jn6:A (1.72) BS01 HEM N/A N/A A8CF72 N/A
    941497 9jn6:A (1.72) BS02 A1ECN N/A N/A A8CF72 N/A
    941498 9jn6:B (1.72) BS01 HEM N/A N/A A8CF72 N/A
    941499 9jn6:B (1.72) BS02 A1ECN N/A N/A A8CF72 N/A
    941500 9jn6:B (1.72) BS03 HEM N/A N/A A8CF72 N/A
    941501 9jn6:C (1.72) BS01 HEM N/A N/A A8CF72 N/A
    941502 9jn6:D (1.72) BS01 HEM N/A N/A A8CF72 N/A
    941503 9jn6:D (1.72) BS02 A1ECN N/A N/A A8CF72 N/A
    941504 9jn6:D (1.72) BS03 HEM N/A N/A A8CF72 N/A
    941505 9jn8:A (2.12) BS01 FES N/A N/A O30786 39924633
    941506 9jn8:B (2.12) BS01 FES N/A N/A O30786 39924633
    941507 9jn8:C (2.12) BS01 FES N/A N/A O30786 39924633
    941508 9jnn:B (5.4) BS01 7RC N/A N/A Q00960 39855198
    941509 9jnn:D (5.4) BS01 7RC N/A N/A Q00960 39855198
    941510 9joa:A (1.5) BS01 MN N/A N/A O96693 38647213
    941511 9joa:A (1.5) BS02 UW0 N/A N/A O96693 38647213
    941512 9joa:B (1.5) BS01 MN N/A N/A O96693 38647213
    941513 9joa:B (1.5) BS02 UW0 N/A N/A O96693 38647213
    941514 9joa:B (1.5) BS03 CA N/A N/A O96693 38647213
    941515 9joa:B (1.5) BS04 CA N/A N/A O96693 38647213
    941516 9job:A (1.39) BS01 NDP N/A N/A O96693 38647213
    941517 9job:A (1.39) BS02 MN N/A N/A O96693 38647213
    941518 9job:A (1.39) BS03 UW0 N/A N/A O96693 38647213
    941519 9job:B (1.39) BS01 NDP N/A N/A O96693 38647213
    941520 9job:B (1.39) BS02 MN N/A N/A O96693 38647213
    941521 9job:B (1.39) BS03 UW0 N/A N/A O96693 38647213
    941522 9job:B (1.39) BS04 CA N/A N/A O96693 38647213
    941523 9job:B (1.39) BS05 CA N/A N/A O96693 38647213
    941524 9jof:A (1.5) BS01 X6Y N/A N/A A0A1B1Y6G8 N/A
    941525 9jof:A (1.5) BS02 X2Y N/A N/A A0A1B1Y6G8 N/A
    941526 9jof:A (1.5) BS03 FUC N/A N/A A0A1B1Y6G8 N/A
    941527 9jof:B (1.5) BS01 X6Y N/A N/A A0A1B1Y6G8 N/A
    941528 9jof:B (1.5) BS02 X2Y N/A N/A A0A1B1Y6G8 N/A
    941529 9jof:B (1.5) BS03 FUC N/A N/A A0A1B1Y6G8 N/A
    941530 9jog:A (1.4) BS01 X6Y N/A N/A A0A1B1Y6G8 N/A
    941531 9jog:A (1.4) BS02 X6Y N/A N/A A0A1B1Y6G8 N/A
    941532 9jog:A (1.4) BS03 FUC N/A N/A A0A1B1Y6G8 N/A
    941533 9jog:A (1.4) BS04 X2Y N/A N/A A0A1B1Y6G8 N/A
    941534 9jog:B (1.4) BS01 X6Y N/A N/A A0A1B1Y6G8 N/A
    941535 9jog:B (1.4) BS02 X6Y N/A N/A A0A1B1Y6G8 N/A
    941536 9jog:B (1.4) BS03 FUC N/A N/A A0A1B1Y6G8 N/A
    941537 9joh:A (1.36) BS01 X6Y N/A N/A A0A1B1Y6G8 N/A
    941538 9joh:A (1.36) BS02 X6Y N/A N/A A0A1B1Y6G8 N/A
    941539 9joh:A (1.36) BS03 X2Y N/A N/A A0A1B1Y6G8 N/A
    941540 9joh:A (1.36) BS04 FUC N/A N/A A0A1B1Y6G8 N/A
    941541 9joh:B (1.36) BS01 X6Y N/A N/A A0A1B1Y6G8 N/A
    941542 9joh:B (1.36) BS02 X2Y N/A N/A A0A1B1Y6G8 N/A
    941543 9joh:B (1.36) BS03 FUC N/A N/A A0A1B1Y6G8 N/A
    941544 9joo:A (1.97) BS01 X6Y N/A N/A A0A1B1Y6K9 N/A
    941545 9joo:A (1.97) BS02 X2Y N/A N/A A0A1B1Y6K9 N/A
    941546 9joo:A (1.97) BS03 X6Y N/A N/A A0A1B1Y6K9 N/A
    941547 9jp2:A (2.02) BS01 X6Y N/A N/A A0A5C6D8T6 N/A
    941548 9jp3:A (1.4) BS01 X6Y N/A N/A A0A5C6D8T6 N/A
    941549 9jp3:A (1.4) BS02 X2Y N/A N/A A0A5C6D8T6 N/A
    941550 9jp3:A (1.4) BS03 FUC N/A N/A A0A5C6D8T6 N/A
    941551 9jp5:A (2.88) BS01 FES N/A GO:0004497 ... Q0RWD5 N/A
    941552 9jp5:A (2.88) BS02 FE2 N/A GO:0004497 ... Q0RWD5 N/A
    941553 9jp5:C (2.88) BS01 FES N/A GO:0004497 ... Q0RWD5 N/A
    941554 9jp5:C (2.88) BS02 FE2 N/A GO:0004497 ... Q0RWD5 N/A
    941555 9jp5:E (2.88) BS01 FES N/A GO:0004497 ... Q0RWD5 N/A
    941556 9jp5:E (2.88) BS02 FE2 N/A GO:0004497 ... Q0RWD5 N/A
    941557 9jp5:G (2.88) BS01 FES N/A GO:0004497 ... Q0RWD5 N/A
    941558 9jp5:G (2.88) BS02 FE2 N/A GO:0004497 ... Q0RWD5 N/A
    941559 9jpi:A (2.0) BS01 MG N/A GO:0004160 ... Q9LIR4 39494391
    941560 9jpi:A (2.0) BS02 K0O N/A GO:0004160 ... Q9LIR4 39494391
    941561 9jpi:A (2.0) BS03 K0O N/A GO:0004160 ... Q9LIR4 39494391
    941562 9jpi:A (2.0) BS04 FES N/A GO:0004160 ... Q9LIR4 39494391
    941563 9jpj:C (3.72) BS01 dna N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941564 9jpj:C (3.72) BS02 dna N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941565 9jpj:D (3.72) BS01 dna N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941566 9jpj:D (3.72) BS02 dna N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941567 9jpj:D (3.72) BS03 ZN N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941568 9jpj:E (3.72) BS01 dna N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941569 9jpj:E (3.72) BS02 dna N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941570 9jpj:E (3.72) BS03 ZN N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941571 9jpj:F (3.72) BS01 dna N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941572 9jpj:F (3.72) BS02 dna N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941573 9jpj:F (3.72) BS03 ZN N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941574 9jpj:I (3.72) BS01 dna N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941575 9jpj:I (3.72) BS02 dna N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941576 9jpj:J (3.72) BS01 dna N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941577 9jpj:J (3.72) BS02 dna N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941578 9jpj:J (3.72) BS03 ZN N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941579 9jpj:K (3.72) BS01 dna N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941580 9jpj:K (3.72) BS02 dna N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941581 9jpj:K (3.72) BS03 ZN N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941582 9jpj:L (3.72) BS01 dna N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941583 9jpj:L (3.72) BS02 dna N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941584 9jpj:L (3.72) BS03 ZN N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941585 9jpk:A (2.28) BS01 ZN N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941586 9jpk:B (2.28) BS01 ZN N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941587 9jpl:A (2.01) BS01 2HG N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941588 9jpl:A (2.01) BS02 2HG N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941589 9jpl:A (2.01) BS03 ZN N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941590 9jpl:B (2.01) BS01 2HG N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941591 9jpl:B (2.01) BS02 ZN N/A GO:0003677 ... A0A6N0JVZ6 N/A
    941592 9jqc:A (1.73) BS01 CU N/A GO:0004322 ... P02794 39499210
    941593 9jqc:B (1.73) BS01 CU N/A GO:0004322 ... P02794 39499210
    941594 9jqc:C (1.73) BS01 CU N/A GO:0004322 ... P02794 39499210
    941595 9jqc:D (1.73) BS01 CU N/A GO:0004322 ... P02794 39499210
    941596 9jqc:E (1.73) BS01 CU N/A GO:0004322 ... P02794 39499210
    941597 9jqc:F (1.73) BS01 CU N/A GO:0004322 ... P02794 39499210
    941598 9jqc:G (1.73) BS01 CU N/A GO:0004322 ... P02794 39499210
    941599 9jqc:H (1.73) BS01 CU N/A GO:0004322 ... P02794 39499210
    941600 9jqc:I (1.73) BS01 CU N/A GO:0004322 ... P02794 39499210

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).