SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    94001 2jo9:A (-1.00) BS01 peptide 2.3.2.26 N/A Q8C863 17437719
    94002 2joa:A (-1.00) BS01 peptide 3.4.21.- N/A Q92743 17962403
    94003 2jog:A (-1.00) BS01 peptide 3.1.3.16 GO:0016787 ... Q08209 17502104
    94004 2jox:A (-1.00) BS01 ZN ? GO:0005515 ... Q8WUH1 17610897
    94005 2jox:A (-1.00) BS02 ZN ? GO:0005515 ... Q8WUH1 17610897
    94006 2jox:A (-1.00) BS03 ZN ? GO:0005515 ... Q8WUH1 17610897
    94007 2jp9:A (-1.00) BS01 dna ? N/A P19544 17716689
    94008 2jp9:A (-1.00) BS02 dna ? N/A P19544 17716689
    94009 2jp9:A (-1.00) BS03 ZN ? N/A P19544 17716689
    94010 2jp9:A (-1.00) BS04 ZN ? N/A P19544 17716689
    94011 2jp9:A (-1.00) BS05 ZN ? N/A P19544 17716689
    94012 2jp9:A (-1.00) BS06 ZN ? N/A P19544 17716689
    94013 2jpa:A (-1.00) BS01 dna ? N/A P19544 17716689
    94014 2jpa:A (-1.00) BS02 dna ? N/A P19544 17716689
    94015 2jpa:A (-1.00) BS03 ZN ? N/A P19544 17716689
    94016 2jpa:A (-1.00) BS04 ZN ? N/A P19544 17716689
    94017 2jpa:A (-1.00) BS05 ZN ? N/A P19544 17716689
    94018 2jpa:A (-1.00) BS06 ZN ? N/A P19544 17716689
    94019 2jpp:A (-1.00) BS01 rna ? GO:0003723 ... P0DPC3 17704818
    94020 2jpp:A (-1.00) BS02 rna ? GO:0003723 ... P0DPC3 17704818
    94021 2jpp:B (-1.00) BS01 rna ? GO:0003723 ... P0DPC3 17704818
    94022 2jpp:B (-1.00) BS02 rna ? GO:0003723 ... P0DPC3 17704818
    94023 2jpr:A (-1.00) BS01 JPR 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0016032 ... P12497 17826792
    94024 2jq5:A (-1.00) BS01 ZN ? N/A Q6N568 N/A
    94025 2jq6:A (-1.00) BS01 CA ? GO:0005509 ... Q9H4M9 17899392
    94026 2jq7:A (-1.00) BS01 rna ? GO:0003735 ... P29395 17169991
    94027 2jq9:A (-1.00) BS01 peptide 3.6.4.6 N/A Q9UN37 17928862
    94028 2jqi:A (-1.00) BS01 peptide 2.7.12.1 N/A P22216 18570878
    94029 2jqk:A (-1.00) BS01 peptide 3.6.4.6 N/A O75351 17928862
    94030 2jql:A (-1.00) BS01 peptide 2.7.11.1 N/A P39009 18570878
    94031 2jqr:A (-1.00) BS01 HEC ? GO:0005515 ... P00044 18439013
    94032 2jqr:B (-1.00) BS01 FES ? GO:0051536 ... P00257 18439013
    94033 2jr7:A (-1.00) BS01 ZN ? GO:0002926 ... Q96FX2 18214955
    94034 2jrj:A (-1.00) BS01 ZN 2.3.2.27 N/A Q96PM5 19043414
    94035 2jrj:A (-1.00) BS02 ZN 2.3.2.27 N/A Q96PM5 19043414
    94036 2jrp:A (-1.00) BS01 ZN ? N/A Q8ZN54 N/A
    94037 2jrp:A (-1.00) BS02 ZN ? N/A Q8ZN54 N/A
    94038 2jsc:A (-1.00) BS01 CD ? GO:0003677 ... P9WMI9 17599915
    94039 2jsc:B (-1.00) BS01 CD ? GO:0003677 ... P9WMI9 17599915
    94040 2jsd:A (-1.00) BS01 CA 3.4.24.- GO:0004222 ... O60882 17869250
    94041 2jsd:A (-1.00) BS02 CA 3.4.24.- GO:0004222 ... O60882 17869250
    94042 2jsd:A (-1.00) BS03 ZN 3.4.24.- GO:0004222 ... O60882 17869250
    94043 2jsd:A (-1.00) BS04 ZN 3.4.24.- GO:0004222 ... O60882 17869250
    94044 2jsd:A (-1.00) BS05 NGH 3.4.24.- GO:0004222 ... O60882 17869250
    94045 2jst:B (-1.00) BS01 HLT N/A N/A N/A 18310239
    94046 2jt2:A (-1.00) BS01 ZN 3.5.1.108 GO:0005737 ... O67648 18025458
    94047 2jt2:A (-1.00) BS02 C90 3.5.1.108 GO:0005737 ... O67648 18025458
    94048 2jt5:A (-1.00) BS01 ZN 3.4.24.17 GO:0004222 ... P08254 17710450
    94049 2jt5:A (-1.00) BS02 ZN 3.4.24.17 GO:0004222 ... P08254 17710450
    94050 2jt5:A (-1.00) BS03 CA 3.4.24.17 GO:0004222 ... P08254 17710450
    94051 2jt5:A (-1.00) BS04 CA 3.4.24.17 GO:0004222 ... P08254 17710450
    94052 2jt5:A (-1.00) BS05 JT5 3.4.24.17 GO:0004222 ... P08254 17710450
    94053 2jt6:A (-1.00) BS01 ZN 3.4.24.17 GO:0004222 ... P08254 17710450
    94054 2jt6:A (-1.00) BS02 ZN 3.4.24.17 GO:0004222 ... P08254 17710450
    94055 2jt6:A (-1.00) BS03 CA 3.4.24.17 GO:0004222 ... P08254 17710450
    94056 2jt6:A (-1.00) BS04 CA 3.4.24.17 GO:0004222 ... P08254 17710450
    94057 2jt6:A (-1.00) BS05 JT6 3.4.24.17 GO:0004222 ... P08254 17710450 BindingDB: Kd=110nM, IC50=47nM
    94058 2jtg:A (-1.00) BS01 ZN ? GO:0043565 ... Q9NVV9 18073205
    94059 2jti:A (-1.00) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 20672804
    94060 2jti:B (-1.00) BS01 HEC ? GO:0005515 ... P00044 20672804
    94061 2jtn:A (-1.00) BS01 ZN ? GO:0008270 ... P70662 18583962
    94062 2jtn:A (-1.00) BS02 ZN ? GO:0008270 ... P70662 18583962
    94063 2jtn:A (-1.00) BS03 ZN ? GO:0008270 ... P70662 18583962
    94064 2jtn:A (-1.00) BS04 ZN ? GO:0008270 ... P70662 18583962
    94065 2ju0:A (-1.00) BS01 CA ? GO:0000139 ... Q06389 17720810
    94066 2ju0:A (-1.00) BS02 CA ? GO:0000139 ... Q06389 17720810
    94067 2ju0:A (-1.00) BS03 CA ? GO:0000139 ... Q06389 17720810
    94068 2ju4:A (-1.00) BS01 RCY 3.1.4.35 GO:0001750 ... P04972 18230733
    94069 2ju4:A (-1.00) BS02 RCY 3.1.4.35 GO:0001750 ... P04972 18230733
    94070 2ju4:A (-1.00) BS03 RCY 3.1.4.35 GO:0001750 ... P04972 18230733
    94071 2ju4:A (-1.00) BS04 RCY 3.1.4.35 GO:0001750 ... P04972 18230733
    94072 2ju4:A (-1.00) BS05 RCY 3.1.4.35 GO:0001750 ... P04972 18230733
    94073 2ju4:A (-1.00) BS06 RCY 3.1.4.35 GO:0001750 ... P04972 18230733
    94074 2ju4:A (-1.00) BS07 RCY 3.1.4.35 GO:0001750 ... P04972 18230733
    94075 2ju4:A (-1.00) BS08 RCY 3.1.4.35 GO:0001750 ... P04972 18230733
    94076 2ju4:A (-1.00) BS09 RCY 3.1.4.35 GO:0001750 ... P04972 18230733
    94077 2jul:A (-1.00) BS01 CA ? GO:0000122 ... Q9QXT8 18201103
    94078 2jul:A (-1.00) BS02 CA ? GO:0000122 ... Q9QXT8 18201103
    94079 2jum:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 17884811
    94080 2jun:A (-1.00) BS01 ZN 2.3.2.27 GO:0008270 ... O15344 18220417
    94081 2jun:A (-1.00) BS02 ZN 2.3.2.27 GO:0008270 ... O15344 18220417
    94082 2jun:A (-1.00) BS03 ZN 2.3.2.27 GO:0008270 ... O15344 18220417
    94083 2jun:A (-1.00) BS04 ZN 2.3.2.27 GO:0008270 ... O15344 18220417
    94084 2jup:W (-1.00) BS01 peptide ? GO:0070063 ... Q8CGF7 17915251
    94085 2juu:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 17884811
    94086 2juv:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 17884811
    94087 2jv1:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 18040865
    94088 2jvn:A (-1.00) BS01 ZN 2.4.2.-
    2.4.2.30
    GO:0008270 ... P09874 18452307
    94089 2jw1:A (-1.00) BS01 peptide ? GO:0005515 ... P0A1X2 18940609
    94090 2jw6:A (-1.00) BS01 ZN ? N/A O75398 18286714
    94091 2jw6:A (-1.00) BS02 ZN ? N/A O75398 18286714
    94092 2jwo:A (-1.00) BS01 ZN ? GO:0003677 ... P21784 15964836
    94093 2jwo:A (-1.00) BS02 ZN ? GO:0003677 ... P21784 15964836
    94094 2jx1:A (-1.00) BS01 dna ? GO:0005634 ... Q8CFC2 N/A
    94095 2jx1:A (-1.00) BS02 dna ? GO:0005634 ... Q8CFC2 N/A
    94096 2jxa:A (-1.00) BS01 RAM ? GO:0030246 ... Q80TR1 N/A
    94097 2jxc:A (-1.00) BS01 CA ? GO:0005509 ... P42566 18200045
    94098 2jxi:A (-1.00) BS01 dna 1.2.1.88
    1.5.5.2
    GO:0006355 ... Q88D80 18767154
    94099 2jxi:A (-1.00) BS02 dna 1.2.1.88
    1.5.5.2
    GO:0006355 ... Q88D80 18767154
    94100 2jxi:B (-1.00) BS01 dna 1.2.1.88
    1.5.5.2
    GO:0006355 ... Q88D80 18767154
    94101 2jxi:B (-1.00) BS02 dna 1.2.1.88
    1.5.5.2
    GO:0006355 ... Q88D80 18767154
    94102 2jxl:A (-1.00) BS01 CA ? GO:0005509 ... P63316 18092822
    94103 2jxm:A (-1.00) BS01 CU ? GO:0005507 ... P50057 18201089
    94104 2jxm:A (-1.00) BS02 HEC ? GO:0005507 ... P50057 18201089
    94105 2jxm:B (-1.00) BS01 HEC ? GO:0005506 ... Q8RN59 18201089
    94106 2jxr:A (2.4) BS01 BMA 3.4.23.25 GO:0000324 ... P07267 9135120
    94107 2jxr:A (2.4) BS02 2Z3 3.4.23.25 GO:0000324 ... P07267 9135120 MOAD: Ki=90nM
    94108 2jxy:A (-1.00) BS01 CA 3.4.24.65 N/A P39900 18465858
    94109 2jyd:A (-1.00) BS01 ZN ? GO:0005634 ... Q8CFC2 18073212
    94110 2jyi:A (-1.00) BS01 ZN 2.1.1.-
    2.1.1.364
    GO:0003677 ... Q03164 N/A
    94111 2jyi:A (-1.00) BS02 ZN 2.1.1.-
    2.1.1.364
    GO:0003677 ... Q03164 N/A
    94112 2jyw:A (-1.00) BS01 ZN 3.5.4.38 GO:0008270 ... Q9HC16 18288108
    94113 2jz3:C (-1.00) BS01 peptide ? GO:0006511 ... P83940 18590740
    94114 2jz8:A (-1.00) BS01 ZN ? N/A A0A0H3M3K8 N/A
    94115 2jzi:A (-1.00) BS01 peptide ? GO:0000922 ... P0DP23 N/A
    94116 2jzi:A (-1.00) BS02 CA ? GO:0000922 ... P0DP23 N/A
    94117 2jzi:A (-1.00) BS03 CA ? GO:0000922 ... P0DP23 N/A
    94118 2jzi:A (-1.00) BS04 CA ? GO:0000922 ... P0DP23 N/A
    94119 2jzi:A (-1.00) BS05 CA ? GO:0000922 ... P0DP23 N/A
    94120 2jzw:A (-1.00) BS01 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 18773912
    94121 2jzw:A (-1.00) BS02 ZN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 18773912
    94122 2jzw:A (-1.00) BS03 ZN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 18773912
    94123 2k00:A (-1.00) BS01 peptide ? N/A P54939 18638481
    94124 2k0a:A (-1.00) BS01 ZN ? GO:0000245 ... Q06835 18621724
    94125 2k0a:A (-1.00) BS02 ZN ? GO:0000245 ... Q06835 18621724
    94126 2k0a:A (-1.00) BS03 ZN ? GO:0000245 ... Q06835 18621724
    94127 2k0c:A (-1.00) BS01 ZN ? N/A P49791 18611384
    94128 2k0e:A (-1.00) BS01 CA ? GO:0000922 ... P0DP23 18462678
    94129 2k0e:A (-1.00) BS02 CA ? GO:0000922 ... P0DP23 18462678
    94130 2k0e:A (-1.00) BS03 CA ? GO:0000922 ... P0DP23 18462678
    94131 2k0e:A (-1.00) BS04 CA ? GO:0000922 ... P0DP23 18462678
    94132 2k0f:A (-1.00) BS01 peptide ? GO:0000922 ... P0DP23 18462678
    94133 2k0f:A (-1.00) BS02 CA ? GO:0000922 ... P0DP23 18462678
    94134 2k0f:A (-1.00) BS03 CA ? GO:0000922 ... P0DP23 18462678
    94135 2k0f:A (-1.00) BS04 CA ? GO:0000922 ... P0DP23 18462678
    94136 2k0f:A (-1.00) BS05 CA ? GO:0000922 ... P0DP23 18462678
    94137 2k0g:A (-1.00) BS01 CMP ? GO:0005221 ... Q98GN8 19465888
    94138 2k0j:A (-1.00) BS01 CA ? GO:0000922 ... P0DP23 19317469
    94139 2k0j:A (-1.00) BS02 CA ? GO:0000922 ... P0DP23 19317469
    94140 2k0j:A (-1.00) BS03 CA ? GO:0000922 ... P0DP23 19317469
    94141 2k0x:A (-1.00) BS01 PNS ? GO:0000035 ... Q02054 18770515
    94142 2k16:A (-1.00) BS01 ZN ? N/A Q5HZG4 N/A
    94143 2k16:A (-1.00) BS02 ZN ? N/A Q5HZG4 N/A
    94144 2k17:A (-1.00) BS01 peptide ? N/A Q5HZG4 N/A
    94145 2k17:A (-1.00) BS02 ZN ? N/A Q5HZG4 N/A
    94146 2k17:A (-1.00) BS03 ZN ? N/A Q5HZG4 N/A
    94147 2k1j:A (-1.00) BS01 ZN ? N/A Q9UNL4 17157298
    94148 2k1j:A (-1.00) BS02 ZN ? N/A Q9UNL4 17157298
    94149 2k1n:A (-1.00) BS01 dna ? GO:0003677 ... P08874 19000822
    94150 2k1n:A (-1.00) BS02 dna ? GO:0003677 ... P08874 19000822
    94151 2k1n:B (-1.00) BS01 dna ? GO:0003677 ... P08874 19000822
    94152 2k1n:B (-1.00) BS02 dna ? GO:0003677 ... P08874 19000822
    94153 2k1n:C (-1.00) BS01 dna ? GO:0003677 ... P08874 19000822
    94154 2k1n:C (-1.00) BS02 dna ? GO:0003677 ... P08874 19000822
    94155 2k1n:D (-1.00) BS01 dna ? GO:0003677 ... P08874 19000822
    94156 2k1p:A (-1.00) BS01 ZN ? N/A O95218 N/A
    94157 2k1q:A (-1.00) BS01 peptide 3.4.21.98
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P90191 19061898
    94158 2k1q:A (-1.00) BS02 ZN 3.4.21.98
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P90191 19061898
    94159 2k1r:A (-1.00) BS01 CU 7.2.2.8 GO:0005507 ... Q04656 N/A
    94160 2k1w:A (-1.00) BS01 CA ? N/A Q8TMX3 19138688
    94161 2k1w:A (-1.00) BS02 CA ? N/A Q8TMX3 19138688
    94162 2k20:A (-1.00) BS01 peptide ? N/A Q9Z340 N/A
    94163 2k2c:A (-1.00) BS01 ZN 2.3.2.27 GO:0008270 ... Q96PM5 19043414
    94164 2k2c:A (-1.00) BS02 ZN 2.3.2.27 GO:0008270 ... Q96PM5 19043414
    94165 2k2c:A (-1.00) BS03 ZN 2.3.2.27 GO:0008270 ... Q96PM5 19043414
    94166 2k2c:A (-1.00) BS04 ZN 2.3.2.27 GO:0008270 ... Q96PM5 19043414
    94167 2k2c:A (-1.00) BS05 ZN 2.3.2.27 GO:0008270 ... Q96PM5 19043414
    94168 2k2c:A (-1.00) BS06 ZN 2.3.2.27 GO:0008270 ... Q96PM5 19043414
    94169 2k2d:A (-1.00) BS01 ZN 2.3.2.27 N/A Q96PM5 19043414
    94170 2k2f:A (-1.00) BS01 peptide ? GO:0000122 ... P35467 18650434
    94171 2k2f:A (-1.00) BS02 CA ? GO:0000122 ... P35467 18650434
    94172 2k2f:A (-1.00) BS03 CA ? GO:0000122 ... P35467 18650434
    94173 2k2f:B (-1.00) BS01 peptide ? GO:0000122 ... P35467 18650434
    94174 2k2f:B (-1.00) BS02 CA ? GO:0000122 ... P35467 18650434
    94175 2k2f:B (-1.00) BS03 CA ? GO:0000122 ... P35467 18650434
    94176 2k2g:A (-1.00) BS01 ZN 3.4.24.65 GO:0004222 ... P39900 18425585
    94177 2k2g:A (-1.00) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 18425585
    94178 2k2g:A (-1.00) BS03 DSV 3.4.24.65 GO:0004222 ... P39900 18425585
    94179 2k2i:A (-1.00) BS01 peptide ? GO:0005509 ... P41208 19857500
    94180 2k2n:A (-1.00) BS01 CYC 2.7.13.3 GO:0006355 ... A0ACD6B871 18762196
    94181 2k2r:A (-1.00) BS01 peptide ? GO:0003779 ... Q9NVD7 18508764
    94182 2k2v:A (-1.00) BS01 CA ? N/A Q8YY42 N/A
    94183 2k2v:A (-1.00) BS02 CA ? N/A Q8YY42 N/A
    94184 2k31:A (-1.00) BS01 35G 3.1.4.35 N/A Q8CG03 18534985
    94185 2k33:A (-1.00) BS01 B6D ? N/A Q8RTE5 19154179
    94186 2k3h:A (-1.00) BS01 CA ? GO:0016020 ... P47708 18945677
    94187 2k3h:A (-1.00) BS02 CA ? GO:0016020 ... P47708 18945677
    94188 2k3m:A (-1.00) BS01 MTN ? N/A O06796 19177358
    94189 2k3m:A (-1.00) BS02 MTN ? N/A O06796 19177358
    94190 2k3r:A (-1.00) BS01 ZN 3.1.26.5 GO:0001682 ... Q8U0H6 18922021
    94191 2k3u:A (-1.00) BS01 peptide ? N/A A6QIG7 19251703
    94192 2k3v:A (-1.00) BS01 HEC ? GO:0042597 ... O33731 18950243
    94193 2k3v:A (-1.00) BS02 HEC ? GO:0042597 ... O33731 18950243
    94194 2k3v:A (-1.00) BS03 HEC ? GO:0042597 ... O33731 18950243
    94195 2k3v:A (-1.00) BS04 HEC ? GO:0042597 ... O33731 18950243
    94196 2k3w:A (-1.00) BS01 peptide 3.6.4.6 N/A Q9UN37 18606141
    94197 2k4d:A (-1.00) BS01 ZN 2.3.2.27 GO:0004842 ... P22681 18996392
    94198 2k4d:A (-1.00) BS02 ZN 2.3.2.27 GO:0004842 ... P22681 18996392
    94199 2k4i:A (-1.00) BS01 PBU 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.47
    GO:0005198 ... P04584 18657545
    94200 2k4w:A (-1.00) BS01 CU1 1.15.1.1 GO:0004784 ... Q704S6 19006322

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).