SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    943601 9brd:f (3.5) BS01 LP3 N/A GO:0004521 ... D3ZIM6 38900912
    943602 9brd:h (3.5) BS01 CLR N/A GO:0000220 ... P63081 38900912
    943603 9brd:i (3.5) BS01 CLR N/A GO:0000220 ... P63081 38900912
    943604 9brd:i (3.5) BS02 CLR N/A GO:0000220 ... P63081 38900912
    943605 9brd:i (3.5) BS03 CLR N/A GO:0000220 ... P63081 38900912
    943606 9brd:j (3.5) BS01 CLR N/A GO:0000220 ... P63081 38900912
    943607 9brd:j (3.5) BS02 CLR N/A GO:0000220 ... P63081 38900912
    943608 9brd:k (3.5) BS01 CLR N/A GO:0000220 ... P63081 38900912
    943609 9brd:k (3.5) BS02 CLR N/A GO:0000220 ... P63081 38900912
    943610 9brd:l (3.5) BS01 CLR N/A GO:0000220 ... P63081 38900912
    943611 9brd:l (3.5) BS02 CLR N/A GO:0000220 ... P63081 38900912
    943612 9brd:l (3.5) BS03 CLR N/A GO:0000220 ... P63081 38900912
    943613 9brd:m (3.5) BS01 CLR N/A GO:0000220 ... P63081 38900912
    943614 9brd:m (3.5) BS02 CLR N/A GO:0000220 ... P63081 38900912
    943615 9brd:m (3.5) BS03 CLR N/A GO:0000220 ... P63081 38900912
    943616 9brd:n (3.5) BS01 CLR N/A GO:0000220 ... P63081 38900912
    943617 9brd:n (3.5) BS02 CLR N/A GO:0000220 ... P63081 38900912
    943618 9brd:n (3.5) BS03 CLR N/A GO:0000220 ... P63081 38900912
    943619 9brd:n (3.5) BS04 CLR N/A GO:0000220 ... P63081 38900912
    943620 9brd:o (3.5) BS01 CLR N/A GO:0000220 ... P63081 38900912
    943621 9brd:o (3.5) BS02 CLR N/A GO:0000220 ... P63081 38900912
    943622 9brd:o (3.5) BS03 CLR N/A GO:0000220 ... P63081 38900912
    943623 9brd:o (3.5) BS04 CLR N/A GO:0000220 ... P63081 38900912
    943624 9bre:A (2.8) BS01 W3F N/A GO:0004672 ... P34947 39549325
    943625 9brf:A (2.84) BS01 A1AQ5 N/A GO:0004672 ... P34947 N/A
    943626 9brg:A (2.7) BS01 A1AQ6 N/A GO:0004672 ... P34947 39549325
    943627 9brh:A (3.69) BS01 A1AQ7 N/A GO:0004672 ... P34947 39549325
    943628 9bri:A (2.9) BS01 A1AQ8 N/A GO:0004672 ... P34947 39549325
    943629 9brj:A (2.8) BS01 A1AQ9 N/A GO:0004672 ... P34947 39549325
    943630 9brk:A (2.7) BS01 A1ARA N/A GO:0004672 ... P34947 N/A
    943631 9brl:A (2.73) BS01 A1ARB N/A GO:0004672 ... P34947 N/A
    943632 9brm:A (2.73) BS01 A1ARC N/A GO:0004672 ... P34947 N/A
    943633 9brn:A (2.9) BS01 A1ARD N/A GO:0004672 ... P34947 N/A
    943634 9bro:A (2.8) BS01 A1ARE N/A GO:0004672 ... P34947 N/A
    943635 9brp:A (2.8) BS01 A1ARF N/A GO:0004672 ... P34947 N/A
    943636 9brv:A (2.6) BS01 A1ASK N/A GO:0006508 ... P0DTD1 39140055
    943637 9brv:A (2.6) BS02 ZN N/A GO:0006508 ... P0DTD1 39140055
    943638 9brv:A (2.6) BS03 A1ASK N/A GO:0006508 ... P0DTD1 39140055
    943639 9brv:B (2.6) BS01 A1ASK N/A GO:0006508 ... P0DTD1 39140055
    943640 9brv:B (2.6) BS02 A1ASK N/A GO:0006508 ... P0DTD1 39140055
    943641 9brv:B (2.6) BS03 ZN N/A GO:0006508 ... P0DTD1 39140055
    943642 9brw:A (2.5) BS01 A1ARL N/A GO:0006508 ... P0DTD1 39140055
    943643 9brw:A (2.5) BS02 ZN N/A GO:0006508 ... P0DTD1 39140055
    943644 9brw:B (2.5) BS01 A1ARL N/A GO:0006508 ... P0DTD1 39140055
    943645 9brw:B (2.5) BS02 ZN N/A GO:0006508 ... P0DTD1 39140055
    943646 9brw:C (2.5) BS01 A1ARL N/A GO:0006508 ... P0DTD1 39140055
    943647 9brw:C (2.5) BS02 ZN N/A GO:0006508 ... P0DTD1 39140055
    943648 9brw:D (2.5) BS01 A1ARL N/A GO:0006508 ... P0DTD1 39140055
    943649 9brw:D (2.5) BS02 ZN N/A GO:0006508 ... P0DTD1 39140055
    943650 9brx:AA (1.8) BS01 A1ASL N/A GO:0006508 ... P0DTD1 39140055
    943651 9brx:AA (1.8) BS02 ZN N/A GO:0006508 ... P0DTD1 39140055
    943652 9bry:c (3.6) BS01 BMA N/A N/A Q9R1Q9 38838737
    943653 9bs0:C (3.3) BS01 rna N/A GO:0002181 ... P42919 39658043
    943654 9bs0:D (3.3) BS01 rna N/A GO:0003735 ... P42920 39658043
    943655 9bs0:E (3.3) BS01 rna N/A GO:0003735 ... P42921 39658043
    943656 9bs0:F (3.3) BS01 rna N/A GO:0002181 ... P46898 39658043
    943657 9bs0:G (3.3) BS01 rna N/A GO:0003729 ... P70974 39658043
    943658 9bs0:H (3.3) BS01 rna N/A GO:0003735 ... P12875 39658043
    943659 9bs0:I (3.3) BS01 rna N/A GO:0003735 ... P19946 39658043
    943660 9bs0:J (3.3) BS01 rna N/A GO:0003735 ... P20277 39658043
    943661 9bs0:K (3.3) BS01 rna N/A GO:0003735 ... O31742 39658043
    943662 9bs0:L (3.3) BS01 rna N/A GO:0000027 ... P55873 39658043
    943663 9bs0:M (3.3) BS01 rna N/A GO:0003723 ... P26908 39658043
    943664 9bs0:N (3.3) BS01 rna N/A GO:0003735 ... P42060 39658043
    943665 9bs0:O (3.3) BS01 rna N/A GO:0003735 ... P42924 39658043
    943666 9bs0:P (3.3) BS01 rna N/A GO:0003723 ... P0CI78 39658043
    943667 9bs0:Q (3.3) BS01 rna N/A GO:0003735 ... P05657 39658043
    943668 9bs0:R (3.3) BS01 rna N/A GO:0003735 ... P12873 39658043
    943669 9bs0:S (3.3) BS01 rna N/A GO:0003735 ... P19947 39658043
    943670 9bs0:T (3.3) BS01 rna N/A GO:0003735 ... O34687 39658043
    943671 9bs0:U (3.3) BS01 rna N/A GO:0003735 ... P05647 39658043
    943672 9bs0:V (3.3) BS01 rna N/A GO:0003735 ... P46899 39658043
    943673 9bs0:V (3.3) BS02 rna N/A GO:0003735 ... P46899 39658043
    943674 9bs0:W (3.3) BS01 rna N/A GO:0005525 ... P50743 39658043
    943675 9bs0:W (3.3) BS02 GNP N/A GO:0005525 ... P50743 39658043
    943676 9bs0:W (3.3) BS03 GNP N/A GO:0005525 ... P50743 39658043
    943677 9bs0:Y (3.3) BS01 rna N/A GO:0003723 ... Q06797 39658043
    943678 9bs0:Z (3.3) BS01 rna N/A GO:0003735 ... P56849 39658043
    943679 9bs1:A (3.71) BS01 BEF N/A GO:0000139 ... P40527 40646185
    943680 9bs1:A (3.71) BS02 A1ARJ N/A GO:0000139 ... P40527 40646185
    943681 9bs2:A (1.51) BS01 dna N/A GO:0000701 ... P83847 40234396
    943682 9bs2:A (1.51) BS02 dna N/A GO:0000701 ... P83847 40234396
    943683 9bs2:A (1.51) BS03 SF4 N/A GO:0000701 ... P83847 40234396
    943684 9bs2:A (1.51) BS04 CA N/A GO:0000701 ... P83847 40234396
    943685 9bs2:A (1.51) BS05 CA N/A GO:0000701 ... P83847 40234396
    943686 9bs2:A (1.51) BS06 CA N/A GO:0000701 ... P83847 40234396
    943687 9bs3:A (2.69) BS01 dna N/A GO:0003677 ... P18858 39159820
    943688 9bs3:A (2.69) BS02 dna N/A GO:0003677 ... P18858 39159820
    943689 9bs3:A (2.69) BS03 dna N/A GO:0003677 ... P18858 39159820
    943690 9bs3:A (2.69) BS04 AMP N/A GO:0003677 ... P18858 39159820
    943691 9bs3:E (2.69) BS01 dna N/A GO:0003677 ... P18858 39159820
    943692 9bs3:E (2.69) BS02 dna N/A GO:0003677 ... P18858 39159820
    943693 9bs3:E (2.69) BS03 dna N/A GO:0003677 ... P18858 39159820
    943694 9bs3:E (2.69) BS04 AMP N/A GO:0003677 ... P18858 39159820
    943695 9bs4:A (2.4) BS01 dna N/A GO:0003677 ... P18858 39159820
    943696 9bs4:A (2.4) BS02 dna N/A GO:0003677 ... P18858 39159820
    943697 9bs4:A (2.4) BS03 dna N/A GO:0003677 ... P18858 39159820
    943698 9bs4:A (2.4) BS04 AMP N/A GO:0003677 ... P18858 39159820
    943699 9bs4:E (2.4) BS01 dna N/A GO:0003677 ... P18858 39159820
    943700 9bs4:E (2.4) BS02 dna N/A GO:0003677 ... P18858 39159820
    943701 9bs4:E (2.4) BS03 dna N/A GO:0003677 ... P18858 39159820
    943702 9bs4:E (2.4) BS04 AMP N/A GO:0003677 ... P18858 39159820
    943703 9bs5:A (1.46) BS01 GLC N/A GO:0030246 ... A0AAN3A6N4 39565129
    943704 9bs5:A (1.46) BS02 AC1 N/A GO:0030246 ... A0AAN3A6N4 39565129
    943705 9bs5:A (1.46) BS03 CA N/A GO:0030246 ... A0AAN3A6N4 39565129
    943706 9bs5:B (1.46) BS01 GLC N/A GO:0030246 ... A0AAN3A6N4 39565129
    943707 9bs5:B (1.46) BS02 AC1 N/A GO:0030246 ... A0AAN3A6N4 39565129
    943708 9bs5:B (1.46) BS03 CA N/A GO:0030246 ... A0AAN3A6N4 39565129
    943709 9bs6:A (2.6) BS01 dna N/A GO:0003676 ... A0A4R1QIZ8 N/A
    943710 9bs6:A (2.6) BS02 dna N/A GO:0003676 ... A0A4R1QIZ8 N/A
    943711 9bs6:A (2.6) BS03 dna N/A GO:0003676 ... A0A4R1QIZ8 N/A
    943712 9bs6:A (2.6) BS04 rna N/A GO:0003676 ... A0A4R1QIZ8 N/A
    943713 9bs6:A (2.6) BS05 MG N/A GO:0003676 ... A0A4R1QIZ8 N/A
    943714 9bs7:A (1.85) BS01 A1AR3 N/A GO:0008233 ... P0DTD1 N/A
    943715 9bs8:A (1.7) BS01 A1AR4 N/A GO:0008233 ... P0DTD1 N/A
    943716 9bs9:R (2.28) BS01 7LD N/A GO:0000139 ... P14416 40683247
    943717 9bsa:A (1.7) BS01 A1AR5 N/A GO:0008233 ... P0DTD1 N/A
    943718 9bsb:R (2.32) BS01 7LD N/A GO:0000139 ... P14416 40683247
    943719 9bse:A (1.85) BS01 A1AR6 N/A GO:0008233 ... P0DTD1 N/A
    943720 9bsf:A (1.75) BS01 A1AR7 N/A GO:0008233 ... P0DTD1 N/A
    943721 9bsg:A (1.75) BS01 A1AR8 N/A GO:0008233 ... P0DTD1 N/A
    943722 9bsi:A (1.7) BS01 A1AR9 N/A GO:0008233 ... P0DTD1 N/A
    943723 9bsl:C (3.1) BS01 rna N/A GO:0002181 ... P42919 39658043
    943724 9bsl:D (3.1) BS01 rna N/A GO:0003735 ... P42920 39658043
    943725 9bsl:E (3.1) BS01 rna N/A GO:0003735 ... P42921 39658043
    943726 9bsl:F (3.1) BS01 rna N/A GO:0002181 ... P46898 39658043
    943727 9bsl:G (3.1) BS01 rna N/A GO:0003729 ... P70974 39658043
    943728 9bsl:H (3.1) BS01 rna N/A GO:0003735 ... P12875 39658043
    943729 9bsl:I (3.1) BS01 rna N/A GO:0003735 ... P19946 39658043
    943730 9bsl:J (3.1) BS01 rna N/A GO:0003735 ... P20277 39658043
    943731 9bsl:K (3.1) BS01 rna N/A GO:0003735 ... O31742 39658043
    943732 9bsl:L (3.1) BS01 rna N/A GO:0000027 ... P55873 39658043
    943733 9bsl:M (3.1) BS01 rna N/A GO:0003723 ... P26908 39658043
    943734 9bsl:N (3.1) BS01 rna N/A GO:0003735 ... P42060 39658043
    943735 9bsl:O (3.1) BS01 rna N/A GO:0003735 ... P42924 39658043
    943736 9bsl:P (3.1) BS01 rna N/A GO:0003723 ... P0CI78 39658043
    943737 9bsl:R (3.1) BS01 rna N/A GO:0003735 ... P12873 39658043
    943738 9bsl:S (3.1) BS01 rna N/A GO:0003735 ... P19947 39658043
    943739 9bsl:T (3.1) BS01 rna N/A GO:0003735 ... O34687 39658043
    943740 9bsl:U (3.1) BS01 rna N/A GO:0003735 ... P05647 39658043
    943741 9bsl:V (3.1) BS01 rna N/A GO:0003924 ... O31743 39658043
    943742 9bsl:V (3.1) BS02 GNP N/A GO:0003924 ... O31743 39658043
    943743 9bsl:W (3.1) BS01 rna N/A GO:0005525 ... P50743 39658043
    943744 9bsl:W (3.1) BS02 GNP N/A GO:0005525 ... P50743 39658043
    943745 9bsl:W (3.1) BS03 GNP N/A GO:0005525 ... P50743 39658043
    943746 9bsl:Y (3.1) BS01 rna N/A GO:0003723 ... Q06797 39658043
    943747 9bsn:A (2.7) BS01 EIC N/A GO:0005267 ... Q9HB14 40011746
    943748 9bsn:A (2.7) BS02 K N/A GO:0005267 ... Q9HB14 40011746
    943749 9bsn:A (2.7) BS03 K N/A GO:0005267 ... Q9HB14 40011746
    943750 9bsn:A (2.7) BS04 K N/A GO:0005267 ... Q9HB14 40011746
    943751 9bsn:A (2.7) BS05 K N/A GO:0005267 ... Q9HB14 40011746
    943752 9bsn:U (2.7) BS01 EIC N/A GO:0005267 ... Q9HB14 40011746
    943753 9bsn:U (2.7) BS02 K N/A GO:0005267 ... Q9HB14 40011746
    943754 9bsn:U (2.7) BS03 K N/A GO:0005267 ... Q9HB14 40011746
    943755 9bsn:U (2.7) BS04 K N/A GO:0005267 ... Q9HB14 40011746
    943756 9bsn:U (2.7) BS05 K N/A GO:0005267 ... Q9HB14 40011746
    943757 9bso:A (1.7) BS01 A1ARW N/A GO:0008233 ... P0DTD1 N/A
    943758 9bsp:A (1.6) BS01 A1ARX N/A GO:0008233 ... P0DTD1 N/A
    943759 9bsq:A (1.8) BS01 A1ARY N/A GO:0008233 ... P0DTD1 N/A
    943760 9bsr:A (1.9) BS01 A1ASA N/A GO:0008233 ... P0DTD1 N/A
    943761 9bss:C (3.1) BS01 rna N/A GO:0002181 ... P42919 39658043
    943762 9bss:D (3.1) BS01 rna N/A GO:0003735 ... P42920 39658043
    943763 9bss:E (3.1) BS01 rna N/A GO:0003735 ... P42921 39658043
    943764 9bss:F (3.1) BS01 rna N/A GO:0002181 ... P46898 39658043
    943765 9bss:G (3.1) BS01 rna N/A GO:0003729 ... P70974 39658043
    943766 9bss:H (3.1) BS01 rna N/A GO:0003735 ... P12875 39658043
    943767 9bss:I (3.1) BS01 rna N/A GO:0003735 ... P19946 39658043
    943768 9bss:J (3.1) BS01 rna N/A GO:0003735 ... P20277 39658043
    943769 9bss:K (3.1) BS01 rna N/A GO:0003735 ... O31742 39658043
    943770 9bss:L (3.1) BS01 rna N/A GO:0000027 ... P55873 39658043
    943771 9bss:M (3.1) BS01 rna N/A GO:0003723 ... P26908 39658043
    943772 9bss:N (3.1) BS01 rna N/A GO:0003735 ... P42060 39658043
    943773 9bss:O (3.1) BS01 rna N/A GO:0003735 ... P42924 39658043
    943774 9bss:P (3.1) BS01 rna N/A GO:0003723 ... P0CI78 39658043
    943775 9bss:Q (3.1) BS01 rna N/A GO:0003735 ... P05657 39658043
    943776 9bss:R (3.1) BS01 rna N/A GO:0003735 ... P12873 39658043
    943777 9bss:S (3.1) BS01 rna N/A GO:0003735 ... P19947 39658043
    943778 9bss:T (3.1) BS01 rna N/A GO:0003735 ... O34687 39658043
    943779 9bss:U (3.1) BS01 rna N/A GO:0003735 ... P05647 39658043
    943780 9bss:V (3.1) BS01 rna N/A GO:0003924 ... O31743 39658043
    943781 9bss:V (3.1) BS02 GNP N/A GO:0003924 ... O31743 39658043
    943782 9bss:W (3.1) BS01 rna N/A GO:0005525 ... P50743 39658043
    943783 9bss:W (3.1) BS02 GNP N/A GO:0005525 ... P50743 39658043
    943784 9bss:W (3.1) BS03 GNP N/A GO:0005525 ... P50743 39658043
    943785 9bss:Y (3.1) BS01 rna N/A GO:0003723 ... Q06797 39658043
    943786 9bst:A (1.6) BS01 A5Z N/A GO:0008233 ... P0DTD1 N/A
    943787 9bsv:D (3.1) BS01 MAN N/A N/A N/A 39715280
    943788 9bsv:F (3.1) BS01 MAN N/A N/A N/A 39715280
    943789 9bsx:A (2.37) BS01 BMA N/A GO:0016020 ... Q5MQD0 40324974
    943790 9bsx:A (2.37) BS02 A1AR1 N/A GO:0016020 ... Q5MQD0 40324974
    943791 9bsx:B (2.37) BS01 A1AR1 N/A GO:0016020 ... Q5MQD0 40324974
    943792 9bsx:C (2.37) BS01 A1AR1 N/A GO:0016020 ... Q5MQD0 40324974
    943793 9bsy:A (2.58) BS01 A1AR1 N/A GO:0016020 ... Q5MQD0 40324974
    943794 9bsy:B (2.58) BS01 A1AR1 N/A GO:0016020 ... Q5MQD0 40324974
    943795 9bsy:C (2.58) BS01 A1AR1 N/A GO:0016020 ... Q5MQD0 40324974
    943796 9bsz:A (2.49) BS01 A1AR2 N/A GO:0016020 ... Q5MQD0 40324974
    943797 9bsz:B (2.49) BS01 A1AR2 N/A GO:0016020 ... Q5MQD0 40324974
    943798 9bsz:C (2.49) BS01 A1AR2 N/A GO:0016020 ... Q5MQD0 40324974
    943799 9bt1:A (2.22) BS01 A1AR1 N/A GO:0016020 ... Q5MQD0 40324974
    943800 9bt1:B (2.22) BS01 A1AR1 N/A GO:0016020 ... Q5MQD0 40324974

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).