SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    943801 9bt1:C (2.22) BS01 A1AR1 N/A GO:0016020 ... Q5MQD0 40324974
    943802 9bt3:A (2.5) BS01 peptide N/A GO:0004106 ... P9WIB9 39903128
    943803 9bt3:B (2.5) BS01 peptide N/A GO:0004106 ... P9WIB9 39903128
    943804 9bt3:C (2.5) BS01 peptide N/A GO:0004106 ... P9WIB9 39903128
    943805 9bt3:D (2.5) BS01 peptide N/A GO:0004106 ... P9WIB9 39903128
    943806 9bt3:E (2.5) BS01 peptide N/A GO:0004106 ... P9WIB9 39903128
    943807 9bt3:F (2.5) BS01 peptide N/A GO:0004106 ... P9WIB9 39903128
    943808 9bt3:F (2.5) BS02 peptide N/A GO:0004106 ... P9WIB9 39903128
    943809 9bt3:G (2.5) BS01 peptide N/A GO:0004106 ... P9WIB9 39903128
    943810 9bt3:G (2.5) BS02 peptide N/A GO:0004106 ... P9WIB9 39903128
    943811 9bt3:H (2.5) BS01 peptide N/A GO:0004106 ... P9WIB9 39903128
    943812 9bt4:A (1.92) BS01 TPP N/A GO:0006086 ... Q8TUN4 39265575
    943813 9bt4:B (1.92) BS01 TPP N/A GO:0006086 ... Q8TUN4 39265575
    943814 9bt4:C (1.92) BS01 SF4 N/A GO:0003824 ... Q8TUN5 39265575
    943815 9bt4:C (1.92) BS02 TPP N/A GO:0003824 ... Q8TUN5 39265575
    943816 9bt4:C (1.92) BS03 MG N/A GO:0003824 ... Q8TUN5 39265575
    943817 9bt4:D (1.92) BS01 SF4 N/A GO:0003824 ... Q8TUN5 39265575
    943818 9bt4:D (1.92) BS02 TPP N/A GO:0003824 ... Q8TUN5 39265575
    943819 9bt4:D (1.92) BS03 MG N/A GO:0003824 ... Q8TUN5 39265575
    943820 9bt4:G (1.92) BS01 SF4 N/A GO:0016491 ... Q8TUN3 39265575
    943821 9bt4:G (1.92) BS02 SF4 N/A GO:0016491 ... Q8TUN3 39265575
    943822 9bt4:H (1.92) BS01 SF4 N/A GO:0016491 ... Q8TUN3 39265575
    943823 9bt4:H (1.92) BS02 SF4 N/A GO:0016491 ... Q8TUN3 39265575
    943824 9bt5:A (2.5) BS01 SIA N/A GO:0019031 ... R4NN21 40471690
    943825 9bt5:B (2.5) BS01 SIA N/A GO:0019031 ... R4NN21 40471690
    943826 9bt6:A (2.8) BS01 peptide N/A GO:0004106 ... P9WIB9 39903128
    943827 9bt6:B (2.8) BS01 peptide N/A GO:0004106 ... P9WIB9 39903128
    943828 9bt6:C (2.8) BS01 peptide N/A GO:0004106 ... P9WIB9 39903128
    943829 9bt6:C (2.8) BS02 peptide N/A GO:0004106 ... P9WIB9 39903128
    943830 9bt6:D (2.8) BS01 peptide N/A GO:0004106 ... P9WIB9 39903128
    943831 9bt6:E (2.8) BS01 peptide N/A GO:0004106 ... P9WIB9 39903128
    943832 9bt6:F (2.8) BS01 peptide N/A GO:0004106 ... P9WIB9 39903128
    943833 9bt6:F (2.8) BS02 peptide N/A GO:0004106 ... P9WIB9 39903128
    943834 9bt6:G (2.8) BS01 peptide N/A GO:0004106 ... P9WIB9 39903128
    943835 9bt6:H (2.8) BS01 peptide N/A GO:0004106 ... P9WIB9 39903128
    943836 9bt7:A (1.8) BS01 peptide N/A GO:0004106 ... P9WIB9 39903128
    943837 9bt7:A (1.8) BS02 peptide N/A GO:0004106 ... P9WIB9 39903128
    943838 9bt7:B (1.8) BS01 peptide N/A GO:0004106 ... P9WIB9 39903128
    943839 9bt7:B (1.8) BS02 peptide N/A GO:0004106 ... P9WIB9 39903128
    943840 9bt8:A (3.34) BS01 peptide N/A N/A N/A 41720803
    943841 9bt8:B (3.34) BS01 peptide N/A GO:0001664 ... P29066 41720803
    943842 9bta:A (2.39) BS01 A1AR1 N/A GO:0016020 ... Q5MQD0 40324974
    943843 9btb:A (2.33) BS01 A1AR1 N/A GO:0016020 ... Q5MQD0 40324974
    943844 9btc:A (2.41) BS01 A1AR1 N/A GO:0016020 ... Q5MQD0 40324974
    943845 9btd:A (2.43) BS01 A1AR1 N/A GO:0016020 ... Q5MQD0 40324974
    943846 9btd:B (2.43) BS01 A1AR1 N/A GO:0016020 ... Q5MQD0 40324974
    943847 9btd:C (2.43) BS01 A1AR1 N/A GO:0016020 ... Q5MQD0 40324974
    943848 9bte:A (1.6) BS01 A1ASF N/A GO:0008233 ... P0DTD1 N/A
    943849 9btf:A (1.8) BS01 A1ASH N/A GO:0008233 ... P0DTD1 N/A
    943850 9bth:H (4.2) BS01 MAN N/A N/A N/A 40824240
    943851 9bth:H (4.2) BS02 MAN N/A N/A N/A 40824240
    943852 9bth:L (4.2) BS01 MAN N/A N/A N/A 40824240
    943853 9bti:E (4.14) BS01 MAN N/A N/A N/A 40824240
    943854 9btj:A (4.22) BS01 MAN N/A GO:0019031 ... C6G0D7 40824240
    943855 9btj:A (4.22) BS02 MAN N/A GO:0019031 ... C6G0D7 40824240
    943856 9btj:A (4.22) BS03 MAN N/A GO:0019031 ... C6G0D7 40824240
    943857 9btk:A (1.79) BS01 A1ASG N/A GO:0008233 ... P0DTD1 N/A
    943858 9btl:L (2.96) BS01 MAN N/A N/A N/A 40824240
    943859 9btm:A (2.73) BS01 GTP N/A GO:0003924 ... P01111 40335703
    943860 9btm:A (2.73) BS02 MG N/A GO:0003924 ... P01111 40335703
    943861 9btn:A (2.04) BS01 peptide N/A N/A Q9UQ13 40335703
    943862 9btp:A (2.37) BS01 A1ATZ N/A N/A Q9UQ13 40335703
    943863 9btr:A (1.9) BS01 A1ASI N/A GO:0008233 ... P0DTD1 N/A
    943864 9bts:A (1.85) BS01 HEM N/A GO:0004322 ... A0A1E3M9R5 39107474
    943865 9bts:B (1.85) BS01 HEM N/A GO:0004322 ... A0A1E3M9R5 39107474
    943866 9bts:C (1.85) BS01 HEM N/A GO:0004322 ... A0A1E3M9R5 39107474
    943867 9bts:D (1.85) BS01 HEM N/A GO:0004322 ... A0A1E3M9R5 39107474
    943868 9bts:E (1.85) BS01 HEM N/A GO:0004322 ... A0A1E3M9R5 39107474
    943869 9bts:F (1.85) BS01 HEM N/A GO:0004322 ... A0A1E3M9R5 39107474
    943870 9bts:G (1.85) BS01 HEM N/A GO:0004322 ... A0A1E3M9R5 39107474
    943871 9bts:H (1.85) BS01 HEM N/A GO:0004322 ... A0A1E3M9R5 39107474
    943872 9bts:a (1.85) BS01 HEM N/A GO:0004322 ... T2HRY3 39107474
    943873 9bts:b (1.85) BS01 HEM N/A GO:0004322 ... T2HRY3 39107474
    943874 9bts:c (1.85) BS01 HEM N/A GO:0004322 ... T2HRY3 39107474
    943875 9bts:d (1.85) BS01 HEM N/A GO:0004322 ... T2HRY3 39107474
    943876 9bts:e (1.85) BS01 HEM N/A GO:0004322 ... T2HRY3 39107474
    943877 9bts:f (1.85) BS01 HEM N/A GO:0004322 ... T2HRY3 39107474
    943878 9bts:g (1.85) BS01 HEM N/A GO:0004322 ... T2HRY3 39107474
    943879 9bts:h (1.85) BS01 HEM N/A GO:0004322 ... T2HRY3 39107474
    943880 9btt:A (1.8) BS01 A1ASJ N/A GO:0008233 ... P0DTD1 N/A
    943881 9btv:C (3.48) BS01 MAN N/A GO:0019031 ... O55774 40824240
    943882 9btv:C (3.48) BS02 MAN N/A GO:0019031 ... O55774 40824240
    943883 9btv:E (3.48) BS01 MAN N/A GO:0019031 ... O55774 40824240
    943884 9btv:L (3.48) BS01 MAN N/A N/A N/A 40824240
    943885 9btx:A (2.05) BS01 H6N N/A N/A Q95460 39820322
    943886 9btx:C (2.05) BS01 H6N N/A N/A Q95460 39820322
    943887 9bty:A (2.85) BS01 XIK N/A N/A Q95460 39820322
    943888 9bty:C (2.85) BS01 XIK N/A N/A Q95460 39820322
    943889 9btz:A (3.0) BS01 XIE N/A N/A Q95460 39820322
    943890 9btz:C (3.0) BS01 XIE N/A N/A Q95460 39820322
    943891 9bu0:A (2.89) BS01 NK N/A N/A Q95460 39820322
    943892 9bu0:C (2.89) BS01 NK N/A N/A Q95460 39820322
    943893 9bu1:A (1.75) BS01 A1ASN N/A N/A P03372 39825366
    943894 9bu1:B (1.75) BS01 A1ASN N/A N/A P03372 39825366
    943895 9bu2:A (2.87) BS01 GLY N/A GO:0004888 ... O75311 39693447
    943896 9bu2:B (2.87) BS01 GLY N/A GO:0004888 ... O75311 39693447
    943897 9bu2:C (2.87) BS01 GLY N/A GO:0004888 ... O75311 39693447
    943898 9bu2:D (2.87) BS01 GLY N/A GO:0004888 ... O75311 39693447
    943899 9bu2:E (2.87) BS01 GLY N/A GO:0004888 ... O75311 39693447
    943900 9bu4:A (2.9) BS01 CJA N/A GO:0006470 ... Q9Y6W6 40745179
    943901 9bu4:B (2.9) BS01 CJA N/A GO:0006470 ... Q9Y6W6 40745179
    943902 9bu4:B (2.9) BS02 CJA N/A GO:0006470 ... Q9Y6W6 40745179
    943903 9bu4:C (2.9) BS01 CJA N/A GO:0006470 ... Q9Y6W6 40745179
    943904 9bu4:C (2.9) BS02 CJA N/A GO:0006470 ... Q9Y6W6 40745179
    943905 9bu4:D (2.9) BS01 CJA N/A GO:0006470 ... Q9Y6W6 40745179
    943906 9bu4:E (2.9) BS01 CJA N/A GO:0006470 ... Q9Y6W6 40745179
    943907 9bu4:F (2.9) BS01 CJA N/A GO:0006470 ... Q9Y6W6 40745179
    943908 9bu4:G (2.9) BS01 CJA N/A GO:0006470 ... Q9Y6W6 40745179
    943909 9bu4:H (2.9) BS01 CJA N/A GO:0006470 ... Q9Y6W6 40745179
    943910 9bu4:I (2.9) BS01 CJA N/A GO:0006470 ... Q9Y6W6 40745179
    943911 9bu4:J (2.9) BS01 CJA N/A GO:0006470 ... Q9Y6W6 40745179
    943912 9bu4:K (2.9) BS01 CJA N/A GO:0006470 ... Q9Y6W6 40745179
    943913 9bu4:L (2.9) BS01 CJA N/A GO:0006470 ... Q9Y6W6 40745179
    943914 9bu7:E (3.64) BS01 dna N/A GO:0000166 ... P03132 39883011
    943915 9bu7:E (3.64) BS02 AGS N/A GO:0000166 ... P03132 39883011
    943916 9bu7:E (3.64) BS03 MG N/A GO:0000166 ... P03132 39883011
    943917 9bu7:F (3.64) BS01 dna N/A GO:0000166 ... P03132 39883011
    943918 9bu7:F (3.64) BS02 AGS N/A GO:0000166 ... P03132 39883011
    943919 9bu7:F (3.64) BS03 MG N/A GO:0000166 ... P03132 39883011
    943920 9bu7:G (3.64) BS01 dna N/A GO:0000166 ... P03132 39883011
    943921 9bu7:G (3.64) BS02 AGS N/A GO:0000166 ... P03132 39883011
    943922 9bu9:A (1.39) BS01 MN N/A GO:0005737 ... A0A540VG95 39741465
    943923 9bu9:A (1.39) BS02 MN N/A GO:0005737 ... A0A540VG95 39741465
    943924 9bu9:B (1.39) BS01 MN N/A GO:0005737 ... A0A540VG95 39741465
    943925 9bu9:B (1.39) BS02 MN N/A GO:0005737 ... A0A540VG95 39741465
    943926 9bu9:C (1.39) BS01 MN N/A GO:0005737 ... A0A540VG95 39741465
    943927 9bu9:C (1.39) BS02 MN N/A GO:0005737 ... A0A540VG95 39741465
    943928 9bu9:D (1.39) BS01 MN N/A GO:0005737 ... A0A540VG95 39741465
    943929 9bu9:D (1.39) BS02 MN N/A GO:0005737 ... A0A540VG95 39741465
    943930 9bua:A (1.38) BS01 MN N/A GO:0005737 ... A0A540VG95 39741465
    943931 9bua:A (1.38) BS02 MN N/A GO:0005737 ... A0A540VG95 39741465
    943932 9bua:B (1.38) BS01 MN N/A GO:0005737 ... A0A540VG95 39741465
    943933 9bua:B (1.38) BS02 MN N/A GO:0005737 ... A0A540VG95 39741465
    943934 9bua:C (1.38) BS01 MN N/A GO:0005737 ... A0A540VG95 39741465
    943935 9bua:C (1.38) BS02 MN N/A GO:0005737 ... A0A540VG95 39741465
    943936 9bua:D (1.38) BS01 MN N/A GO:0005737 ... A0A540VG95 39741465
    943937 9bua:D (1.38) BS02 MN N/A GO:0005737 ... A0A540VG95 39741465
    943938 9bub:R (2.3) BS01 P42 N/A GO:0001540 ... P30988 40204768
    943939 9buh:2 (2.8) BS01 FES N/A GO:0005739 ... F1RNZ1 N/A
    943940 9buh:4 (2.8) BS01 FES N/A GO:0005739 ... F1RNZ1 N/A
    943941 9buh:7 (2.8) BS01 HEM N/A GO:0005739 ... Q1HBG9 N/A
    943942 9buh:7 (2.8) BS02 HEM N/A GO:0005739 ... Q1HBG9 N/A
    943943 9buh:8 (2.8) BS01 HEC N/A GO:0005739 ... A0A287AZF9 N/A
    943944 9buh:Ak (2.8) BS01 HEA N/A GO:0004129 ... O79876 N/A
    943945 9buh:Ak (2.8) BS02 HEA N/A GO:0004129 ... O79876 N/A
    943946 9buh:B (2.8) BS01 FMN N/A GO:0005743 ... A0A4X1SZP7 N/A
    943947 9buh:B (2.8) BS02 SF4 N/A GO:0005743 ... A0A4X1SZP7 N/A
    943948 9buh:C (2.8) BS01 SF4 N/A GO:0005743 ... A0A480XQH6 N/A
    943949 9buh:E (2.8) BS01 FES N/A GO:0005739 ... A0A4X1VRV3 N/A
    943950 9buh:G (2.8) BS01 SF4 N/A GO:0005743 ... A0A287ARY3 N/A
    943951 9buh:G (2.8) BS02 SF4 N/A GO:0005743 ... A0A287ARY3 N/A
    943952 9buh:G (2.8) BS03 FES N/A GO:0005743 ... A0A287ARY3 N/A
    943953 9buh:H (2.8) BS01 SF4 N/A GO:0016020 ... A0A286ZUN9 N/A
    943954 9buh:H (2.8) BS02 SF4 N/A GO:0016020 ... A0A286ZUN9 N/A
    943955 9buh:I (2.8) BS01 SF4 N/A GO:0008137 ... A0A4X1VVS8 N/A
    943956 9buh:L (2.8) BS01 NDP N/A N/A F1SL07 N/A
    943957 9buh:Q (2.8) BS01 ZMP N/A GO:0005743 ... A0A8D0Z0K9 N/A
    943958 9buh:w (2.8) BS01 HEM N/A GO:0005739 ... Q1HBG9 N/A
    943959 9buh:w (2.8) BS02 HEM N/A GO:0005739 ... Q1HBG9 N/A
    943960 9buh:x (2.8) BS01 HEC N/A GO:0005739 ... A0A287AZF9 N/A
    943961 9bui:A (3.9) BS01 ATP N/A GO:0000502 ... P35998 40532701
    943962 9bui:A (3.9) BS02 ATP N/A GO:0000502 ... P35998 40532701
    943963 9bui:B (3.9) BS01 ADP N/A GO:0000502 ... P62191 40532701
    943964 9bui:B (3.9) BS02 MG N/A GO:0000502 ... P62191 40532701
    943965 9bui:D (3.9) BS01 ATP N/A GO:0000502 ... P43686 40532701
    943966 9bui:E (3.9) BS01 ATP N/A GO:0000502 ... P62333 40532701
    943967 9bui:F (3.9) BS01 ATP N/A GO:0000502 ... P17980 40532701
    943968 9buj:A (2.19) BS01 CA N/A N/A N/A 38935515
    943969 9buk:A (3.4) BS01 ATP N/A GO:0005515 ... Q92887 39779684
    943970 9buk:A (3.4) BS02 ATP N/A GO:0005515 ... Q92887 39779684
    943971 9buk:A (3.4) BS03 MG N/A GO:0005515 ... Q92887 39779684
    943972 9buk:A (3.4) BS04 MG N/A GO:0005515 ... Q92887 39779684
    943973 9buk:A (3.4) BS05 CLR N/A GO:0005515 ... Q92887 39779684
    943974 9buk:A (3.4) BS06 CLR N/A GO:0005515 ... Q92887 39779684
    943975 9bul:A () BS01 FE2 N/A N/A N/A N/A
    943976 9bul:A () BS02 NIO N/A N/A N/A N/A
    943977 9bul:A () BS03 PRO N/A N/A N/A N/A
    943978 9bum:A (3.63) BS01 CLR N/A GO:0005788 ... P38435 39880952
    943979 9buo:A (3.68) BS01 SF4 N/A GO:0005524 ... B9KK24 40274796
    943980 9buo:A (3.68) BS02 PMR N/A GO:0005524 ... B9KK24 40274796
    943981 9buo:B (3.68) BS01 SF4 N/A GO:0005524 ... Q9Z5D9 40274796
    943982 9buo:B (3.68) BS02 PMR N/A GO:0005524 ... Q9Z5D9 40274796
    943983 9buo:C (3.68) BS01 SF4 N/A GO:0005524 ... B9KK24 40274796
    943984 9buo:C (3.68) BS02 PMR N/A GO:0005524 ... B9KK24 40274796
    943985 9buo:D (3.68) BS01 PMR N/A GO:0005524 ... Q9Z5D9 40274796
    943986 9buo:D (3.68) BS02 SF4 N/A GO:0005524 ... Q9Z5D9 40274796
    943987 9buo:D (3.68) BS03 PMR N/A GO:0005524 ... Q9Z5D9 40274796
    943988 9buo:E (3.68) BS01 SF4 N/A GO:0005524 ... Q9RFD6 40274796
    943989 9buo:F (3.68) BS01 SF4 N/A GO:0005524 ... Q9RFD6 40274796
    943990 9buo:G (3.68) BS01 SF4 N/A GO:0005524 ... Q9RFD6 40274796
    943991 9buo:H (3.68) BS01 SF4 N/A GO:0005524 ... Q9RFD6 40274796
    943992 9bup:A0 (2.7) BS01 rna N/A GO:0002181 ... Q8IEM3 40825879
    943993 9bup:A1 (2.7) BS01 rna N/A GO:0003735 ... Q8IKM5 40825879
    943994 9bup:A2 (2.7) BS01 rna N/A GO:0022625 ... Q8IHU0 40825879
    943995 9bup:A3 (2.7) BS01 rna N/A GO:0000463 ... Q8IIB4 40825879
    943996 9bup:A3 (2.7) BS02 rna N/A GO:0000463 ... Q8IIB4 40825879
    943997 9bup:A4 (2.7) BS01 rna N/A GO:0002181 ... C6S3J6 40825879
    943998 9bup:A5 (2.7) BS01 rna N/A GO:0000463 ... O97250 40825879
    943999 9bup:A5 (2.7) BS02 rna N/A GO:0000463 ... O97250 40825879
    944000 9bup:A6 (2.7) BS01 rna N/A GO:0003723 ... Q8IJK8 40825879

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).