SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    944601 9bw2:A (2.5) BS01 MN N/A GO:0000303 ... P04179 39987263
    944602 9bw2:B (2.5) BS01 MN N/A GO:0000303 ... P04179 39987263
    944603 9bw3:A (2.42) BS01 peptide N/A GO:0004748 ... P50620 40075098
    944604 9bw3:A (2.42) BS02 TTP N/A GO:0004748 ... P50620 40075098
    944605 9bw3:A (2.42) BS03 ATP N/A GO:0004748 ... P50620 40075098
    944606 9bw3:A (2.42) BS04 TTP N/A GO:0004748 ... P50620 40075098
    944607 9bw3:B (2.42) BS01 peptide N/A GO:0004748 ... P50620 40075098
    944608 9bw3:B (2.42) BS02 TTP N/A GO:0004748 ... P50620 40075098
    944609 9bw3:B (2.42) BS03 TTP N/A GO:0004748 ... P50620 40075098
    944610 9bw3:B (2.42) BS04 ATP N/A GO:0004748 ... P50620 40075098
    944611 9bw4:A (3.3) BS01 ATP N/A GO:0000502 ... P35998 40770113
    944612 9bw4:B (3.3) BS01 ATP N/A GO:0000502 ... P62191 40770113
    944613 9bw4:B (3.3) BS02 ATP N/A GO:0000502 ... P62191 40770113
    944614 9bw4:C (3.3) BS01 ATP N/A GO:0000502 ... P62195 40770113
    944615 9bw4:C (3.3) BS02 ATP N/A GO:0000502 ... P62195 40770113
    944616 9bw4:D (3.3) BS01 ADP N/A GO:0000502 ... P43686 40770113
    944617 9bw4:D (3.3) BS02 MG N/A GO:0000502 ... P43686 40770113
    944618 9bw4:E (3.3) BS01 ADP N/A GO:0000502 ... P62333 40770113
    944619 9bw4:E (3.3) BS02 MG N/A GO:0000502 ... P62333 40770113
    944620 9bw4:F (3.3) BS01 ADP N/A GO:0000502 ... P17980 40770113
    944621 9bw4:c (3.3) BS01 ZN N/A GO:0000502 ... O00487 40770113
    944622 9bw7:A (2.9) BS01 NAD N/A GO:0005515 ... Q14764 40691181
    944623 9bw7:C (2.9) BS01 NAD N/A GO:0005515 ... Q14764 40691181
    944624 9bw8:A (1.86) BS01 TFA N/A GO:0004497 ... A0ACD6BAH8 39512132
    944625 9bw8:A (1.86) BS02 TFA N/A GO:0004497 ... A0ACD6BAH8 39512132
    944626 9bw8:A (1.86) BS03 HEM N/A GO:0004497 ... A0ACD6BAH8 39512132
    944627 9bw8:B (1.86) BS01 TFA N/A GO:0004497 ... A0ACD6BAH8 39512132
    944628 9bw8:B (1.86) BS02 TFA N/A GO:0004497 ... A0ACD6BAH8 39512132
    944629 9bw8:B (1.86) BS03 HEM N/A GO:0004497 ... A0ACD6BAH8 39512132
    944630 9bw8:C (1.86) BS01 peptide N/A GO:0004497 ... A0ACD6BAH8 39512132
    944631 9bw8:C (1.86) BS02 TFA N/A GO:0004497 ... A0ACD6BAH8 39512132
    944632 9bw8:C (1.86) BS03 HEM N/A GO:0004497 ... A0ACD6BAH8 39512132
    944633 9bwb:A (2.21) BS01 GLY N/A GO:0004888 ... O75311 39693447
    944634 9bwb:A (2.21) BS02 GLY N/A GO:0004888 ... O75311 39693447
    944635 9bwb:B (2.21) BS01 GLY N/A GO:0004888 ... O75311 39693447
    944636 9bwb:B (2.21) BS02 GLY N/A GO:0004888 ... O75311 39693447
    944637 9bwb:C (2.21) BS01 GLY N/A GO:0004888 ... O75311 39693447
    944638 9bwb:C (2.21) BS02 GLY N/A GO:0004888 ... O75311 39693447
    944639 9bwb:D (2.21) BS01 GLY N/A GO:0004888 ... O75311 39693447
    944640 9bwb:D (2.21) BS02 GLY N/A GO:0004888 ... O75311 39693447
    944641 9bwb:E (2.21) BS01 GLY N/A GO:0004888 ... O75311 39693447
    944642 9bwb:E (2.21) BS02 GLY N/A GO:0004888 ... O75311 39693447
    944643 9bwd:B (2.88) BS01 FMN N/A GO:0005743 ... A0A4X1SZP7 N/A
    944644 9bwd:B (2.88) BS02 SF4 N/A GO:0005743 ... A0A4X1SZP7 N/A
    944645 9bwd:C (2.88) BS01 SF4 N/A GO:0005743 ... A0A480XQH6 N/A
    944646 9bwd:E (2.88) BS01 FES N/A GO:0005739 ... A0A4X1VRV3 N/A
    944647 9bwd:G (2.88) BS01 SF4 N/A GO:0005743 ... A0A287ARY3 N/A
    944648 9bwd:G (2.88) BS02 SF4 N/A GO:0005743 ... A0A287ARY3 N/A
    944649 9bwd:G (2.88) BS03 FES N/A GO:0005743 ... A0A287ARY3 N/A
    944650 9bwd:H (2.88) BS01 SF4 N/A GO:0016020 ... A0A286ZUN9 N/A
    944651 9bwd:H (2.88) BS02 SF4 N/A GO:0016020 ... A0A286ZUN9 N/A
    944652 9bwd:I (2.88) BS01 SF4 N/A GO:0008137 ... A0A4X1VVS8 N/A
    944653 9bwd:L (2.88) BS01 NDP N/A N/A F1SL07 N/A
    944654 9bwd:Q (2.88) BS01 ZMP N/A GO:0005743 ... A0A8D0Z0K9 N/A
    944655 9bwe:A (3.07) BS01 GLY N/A GO:0004888 ... O75311 39693447
    944656 9bwe:B (3.07) BS01 GLY N/A GO:0004888 ... O75311 39693447
    944657 9bwe:C (3.07) BS01 GLY N/A GO:0004888 ... O75311 39693447
    944658 9bwe:D (3.07) BS01 GLY N/A GO:0004888 ... O75311 39693447
    944659 9bwe:E (3.07) BS01 GLY N/A GO:0004888 ... O75311 39693447
    944660 9bwf:A (2.2) BS01 CU N/A N/A N/A 39939775
    944661 9bwf:B (2.2) BS01 CU N/A N/A N/A 39939775
    944662 9bwg:A (2.59) BS01 GLY N/A GO:0004888 ... O75311 39693447
    944663 9bwg:A (2.59) BS02 ZN N/A GO:0004888 ... O75311 39693447
    944664 9bwg:B (2.59) BS01 GLY N/A GO:0004888 ... O75311 39693447
    944665 9bwg:B (2.59) BS02 GLY N/A GO:0004888 ... O75311 39693447
    944666 9bwg:B (2.59) BS03 ZN N/A GO:0004888 ... O75311 39693447
    944667 9bwg:C (2.59) BS01 GLY N/A GO:0004888 ... O75311 39693447
    944668 9bwg:C (2.59) BS02 ZN N/A GO:0004888 ... O75311 39693447
    944669 9bwg:D (2.59) BS01 GLY N/A GO:0004888 ... O75311 39693447
    944670 9bwg:D (2.59) BS02 ZN N/A GO:0004888 ... O75311 39693447
    944671 9bwg:E (2.59) BS01 GLY N/A GO:0004888 ... O75311 39693447
    944672 9bwg:E (2.59) BS02 ZN N/A GO:0004888 ... O75311 39693447
    944673 9bwh:A (1.65) BS01 CU N/A N/A N/A 39939775
    944674 9bwh:B (1.65) BS01 CU N/A N/A N/A 39939775
    944675 9bwi:A (2.3) BS01 CU N/A N/A N/A 39939775
    944676 9bwi:B (2.3) BS01 CU N/A N/A N/A 39939775
    944677 9bwj:A (2.21) BS01 ZN N/A GO:0004888 ... O75311 39693447
    944678 9bwj:B (2.21) BS01 ZN N/A GO:0004888 ... O75311 39693447
    944679 9bwj:C (2.21) BS01 ZN N/A GO:0004888 ... O75311 39693447
    944680 9bwj:D (2.21) BS01 ZN N/A GO:0004888 ... O75311 39693447
    944681 9bwj:E (2.21) BS01 ZN N/A GO:0004888 ... O75311 39693447
    944682 9bwl:A (2.1) BS01 COA N/A GO:0016746 ... N/A 41365852
    944683 9bwl:B (2.1) BS01 COA N/A GO:0016746 ... N/A 41365852
    944684 9bwm:A (2.28) BS01 MN N/A GO:0000303 ... P04179 39987263
    944685 9bwm:B (2.28) BS01 MN N/A GO:0000303 ... P04179 39987263
    944686 9bwo:A (2.23) BS01 COA N/A GO:0016746 ... N/A 41365852
    944687 9bwo:B (2.23) BS01 COA N/A GO:0016746 ... N/A 41365852
    944688 9bwp:A (2.45) BS01 COA N/A GO:0016746 ... N/A 41365852
    944689 9bwp:A (2.45) BS02 A1BNQ N/A GO:0016746 ... N/A 41365852
    944690 9bwp:B (2.45) BS01 COA N/A GO:0016746 ... N/A 41365852
    944691 9bwp:B (2.45) BS02 A1BNQ N/A GO:0016746 ... N/A 41365852
    944692 9bwq:A (1.4) BS01 MN N/A GO:0000303 ... P04179 39987263
    944693 9bwq:A (1.4) BS02 PEO N/A GO:0000303 ... P04179 39987263
    944694 9bwq:B (1.4) BS01 MN N/A GO:0000303 ... P04179 39987263
    944695 9bwr:A (1.5) BS01 MN N/A GO:0000303 ... P04179 39987263
    944696 9bwr:B (1.5) BS01 MN N/A GO:0000303 ... P04179 39987263
    944697 9bws:A (2.39) BS01 K N/A GO:0005267 ... Q9HB14 40011746
    944698 9bws:A (2.39) BS02 EIC N/A GO:0005267 ... Q9HB14 40011746
    944699 9bws:A (2.39) BS03 K N/A GO:0005267 ... Q9HB14 40011746
    944700 9bws:A (2.39) BS04 K N/A GO:0005267 ... Q9HB14 40011746
    944701 9bws:A (2.39) BS05 K N/A GO:0005267 ... Q9HB14 40011746
    944702 9bws:U (2.39) BS01 EIC N/A GO:0005267 ... Q9HB14 40011746
    944703 9bws:U (2.39) BS02 K N/A GO:0005267 ... Q9HB14 40011746
    944704 9bws:U (2.39) BS03 K N/A GO:0005267 ... Q9HB14 40011746
    944705 9bws:U (2.39) BS04 K N/A GO:0005267 ... Q9HB14 40011746
    944706 9bws:U (2.39) BS05 K N/A GO:0005267 ... Q9HB14 40011746
    944707 9bwt:A (2.5) BS01 ATP N/A GO:0006811 ... J3QSS1 39143061
    944708 9bwt:A (2.5) BS02 HCZ N/A GO:0006811 ... J3QSS1 39143061
    944709 9bwt:B (2.5) BS01 ATP N/A GO:0006811 ... J3QSS1 39143061
    944710 9bwu:A (2.2) BS01 FE2 N/A GO:0005506 ... P76621 N/A
    944711 9bwv:A (5.1) BS01 rna N/A GO:0003723 ... A0A3G5CVQ1 40373132
    944712 9bwv:C (5.1) BS01 rna N/A GO:0003723 ... A0A3G5CVQ1 40373132
    944713 9bwv:E (5.1) BS01 rna N/A GO:0003723 ... A0A3G5CVQ1 40373132
    944714 9bwv:H (5.1) BS01 rna N/A GO:0003723 ... A0A3G5CVQ1 40373132
    944715 9bwx:A (2.91) BS01 TTP N/A GO:0004748 ... P50620 40075098
    944716 9bwx:A (2.91) BS02 ATP N/A GO:0004748 ... P50620 40075098
    944717 9bwx:A (2.91) BS03 TTP N/A GO:0004748 ... P50620 40075098
    944718 9bwx:B (2.91) BS01 TTP N/A GO:0004748 ... P50620 40075098
    944719 9bwx:B (2.91) BS02 TTP N/A GO:0004748 ... P50620 40075098
    944720 9bwx:B (2.91) BS03 ATP N/A GO:0004748 ... P50620 40075098
    944721 9bwx:C (2.91) BS01 MN N/A GO:0004748 ... P50621 40075098
    944722 9bwx:C (2.91) BS02 MN N/A GO:0004748 ... P50621 40075098
    944723 9bwx:D (2.91) BS01 MN N/A GO:0004748 ... P50621 40075098
    944724 9bwx:D (2.91) BS02 MN N/A GO:0004748 ... P50621 40075098
    944725 9bwz:A (9.2) BS01 rna N/A GO:0003723 ... P15682 40373132
    944726 9bwz:B (9.2) BS01 rna N/A GO:0003723 ... P15682 40373132
    944727 9bwz:C (9.2) BS01 rna N/A GO:0003723 ... P15682 40373132
    944728 9bwz:D (9.2) BS01 rna N/A GO:0003723 ... P15682 40373132
    944729 9bx0:A (9.2) BS01 rna N/A GO:0003723 ... P15682 40373132
    944730 9bx0:B (9.2) BS01 rna N/A GO:0003723 ... P15682 40373132
    944731 9bx0:C (9.2) BS01 rna N/A GO:0003723 ... P15682 40373132
    944732 9bx0:D (9.2) BS01 rna N/A GO:0003723 ... P15682 40373132
    944733 9bx1:A (8.0) BS01 rna N/A GO:0003723 ... P15682 40373132
    944734 9bx1:B (8.0) BS01 rna N/A GO:0003723 ... P15682 40373132
    944735 9bx1:C (8.0) BS01 rna N/A GO:0003723 ... P15682 40373132
    944736 9bx1:D (8.0) BS01 rna N/A GO:0003723 ... P15682 40373132
    944737 9bx2:A (3.79) BS01 TTP N/A GO:0004748 ... P50620 40075098
    944738 9bx2:A (3.79) BS02 ATP N/A GO:0004748 ... P50620 40075098
    944739 9bx2:A (3.79) BS03 TTP N/A GO:0004748 ... P50620 40075098
    944740 9bx2:B (3.79) BS01 TTP N/A GO:0004748 ... P50620 40075098
    944741 9bx2:B (3.79) BS02 TTP N/A GO:0004748 ... P50620 40075098
    944742 9bx2:B (3.79) BS03 ATP N/A GO:0004748 ... P50620 40075098
    944743 9bx2:C (3.79) BS01 MN N/A GO:0004748 ... P50621 40075098
    944744 9bx2:C (3.79) BS02 MN N/A GO:0004748 ... P50621 40075098
    944745 9bx2:D (3.79) BS01 MN N/A GO:0004748 ... P50621 40075098
    944746 9bx2:D (3.79) BS02 MN N/A GO:0004748 ... P50621 40075098
    944747 9bx3:A (3.9) BS01 TTP N/A GO:0004748 ... P50620 40075098
    944748 9bx3:A (3.9) BS02 ATP N/A GO:0004748 ... P50620 40075098
    944749 9bx3:A (3.9) BS03 TTP N/A GO:0004748 ... P50620 40075098
    944750 9bx3:B (3.9) BS01 TTP N/A GO:0004748 ... P50620 40075098
    944751 9bx3:B (3.9) BS02 TTP N/A GO:0004748 ... P50620 40075098
    944752 9bx3:B (3.9) BS03 ATP N/A GO:0004748 ... P50620 40075098
    944753 9bx3:C (3.9) BS01 MN N/A GO:0004748 ... P50621 40075098
    944754 9bx3:C (3.9) BS02 MN N/A GO:0004748 ... P50621 40075098
    944755 9bx3:D (3.9) BS01 MN N/A GO:0004748 ... P50621 40075098
    944756 9bx3:D (3.9) BS02 MN N/A GO:0004748 ... P50621 40075098
    944757 9bx4:A (9.2) BS01 rna N/A GO:0003723 ... P15682 40373132
    944758 9bx4:B (9.2) BS01 rna N/A GO:0003723 ... P15682 40373132
    944759 9bx4:C (9.2) BS01 rna N/A GO:0003723 ... P15682 40373132
    944760 9bx4:D (9.2) BS01 rna N/A GO:0003723 ... P15682 40373132
    944761 9bx5:H (1.57) BS01 peptide N/A N/A N/A N/A
    944762 9bx5:L (1.57) BS01 peptide N/A N/A N/A N/A
    944763 9bx6:A (3.44) BS01 TTP N/A GO:0004748 ... P50620 40075098
    944764 9bx6:A (3.44) BS02 ATP N/A GO:0004748 ... P50620 40075098
    944765 9bx6:A (3.44) BS03 TTP N/A GO:0004748 ... P50620 40075098
    944766 9bx6:B (3.44) BS01 TTP N/A GO:0004748 ... P50620 40075098
    944767 9bx6:B (3.44) BS02 TTP N/A GO:0004748 ... P50620 40075098
    944768 9bx6:B (3.44) BS03 ATP N/A GO:0004748 ... P50620 40075098
    944769 9bx6:C (3.44) BS01 MN N/A GO:0004748 ... P50621 40075098
    944770 9bx6:C (3.44) BS02 MN N/A GO:0004748 ... P50621 40075098
    944771 9bx6:D (3.44) BS01 MN N/A GO:0004748 ... P50621 40075098
    944772 9bx6:D (3.44) BS02 MN N/A GO:0004748 ... P50621 40075098
    944773 9bx7:H (1.7) BS01 peptide N/A N/A N/A N/A
    944774 9bx7:L (1.7) BS01 peptide N/A N/A N/A N/A
    944775 9bx8:A (3.59) BS01 TTP N/A GO:0004748 ... P50620 40075098
    944776 9bx8:A (3.59) BS02 ATP N/A GO:0004748 ... P50620 40075098
    944777 9bx8:A (3.59) BS03 TTP N/A GO:0004748 ... P50620 40075098
    944778 9bx8:B (3.59) BS01 TTP N/A GO:0004748 ... P50620 40075098
    944779 9bx8:B (3.59) BS02 TTP N/A GO:0004748 ... P50620 40075098
    944780 9bx8:B (3.59) BS03 ATP N/A GO:0004748 ... P50620 40075098
    944781 9bx8:C (3.59) BS01 MN N/A GO:0004748 ... P50621 40075098
    944782 9bx8:C (3.59) BS02 MN N/A GO:0004748 ... P50621 40075098
    944783 9bx8:D (3.59) BS01 MN N/A GO:0004748 ... P50621 40075098
    944784 9bx8:D (3.59) BS02 MN N/A GO:0004748 ... P50621 40075098
    944785 9bx9:A (3.79) BS01 TTP N/A GO:0004748 ... P50620 40075098
    944786 9bx9:A (3.79) BS02 ATP N/A GO:0004748 ... P50620 40075098
    944787 9bx9:A (3.79) BS03 TTP N/A GO:0004748 ... P50620 40075098
    944788 9bx9:B (3.79) BS01 TTP N/A GO:0004748 ... P50620 40075098
    944789 9bx9:B (3.79) BS02 TTP N/A GO:0004748 ... P50620 40075098
    944790 9bx9:B (3.79) BS03 ATP N/A GO:0004748 ... P50620 40075098
    944791 9bx9:C (3.79) BS01 MN N/A GO:0004748 ... P50621 40075098
    944792 9bx9:C (3.79) BS02 MN N/A GO:0004748 ... P50621 40075098
    944793 9bx9:D (3.79) BS01 MN N/A GO:0004748 ... P50621 40075098
    944794 9bx9:D (3.79) BS02 MN N/A GO:0004748 ... P50621 40075098
    944795 9bxb:A (2.5) BS01 A1AS5 N/A GO:0019031 ... A0A0M3KKW9 39563795
    944796 9bxc:A (2.76) BS01 peptide N/A GO:0004748 ... P50620 40075098
    944797 9bxc:A (2.76) BS02 TTP N/A GO:0004748 ... P50620 40075098
    944798 9bxc:A (2.76) BS03 ATP N/A GO:0004748 ... P50620 40075098
    944799 9bxc:A (2.76) BS04 GDP N/A GO:0004748 ... P50620 40075098
    944800 9bxc:A (2.76) BS05 TTP N/A GO:0004748 ... P50620 40075098

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).