SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    945001 9byc:B (3.94) BS04 DGI N/A GO:0004748 ... P50620 40075098
    945002 9byc:C (3.94) BS01 MN N/A GO:0004748 ... P50621 40075098
    945003 9byc:C (3.94) BS02 MN N/A GO:0004748 ... P50621 40075098
    945004 9byc:D (3.94) BS01 MN N/A GO:0004748 ... P50621 40075098
    945005 9byc:D (3.94) BS02 MN N/A GO:0004748 ... P50621 40075098
    945006 9byd:A (4.2) BS01 TTP N/A GO:0004748 ... P50620 40075098
    945007 9byd:A (4.2) BS02 ATP N/A GO:0004748 ... P50620 40075098
    945008 9byd:A (4.2) BS03 DGI N/A GO:0004748 ... P50620 40075098
    945009 9byd:A (4.2) BS04 TTP N/A GO:0004748 ... P50620 40075098
    945010 9byd:B (4.2) BS01 TTP N/A GO:0004748 ... P50620 40075098
    945011 9byd:B (4.2) BS02 TTP N/A GO:0004748 ... P50620 40075098
    945012 9byd:B (4.2) BS03 ATP N/A GO:0004748 ... P50620 40075098
    945013 9byd:B (4.2) BS04 DGI N/A GO:0004748 ... P50620 40075098
    945014 9byd:C (4.2) BS01 MN N/A GO:0004748 ... P50621 40075098
    945015 9byd:C (4.2) BS02 MN N/A GO:0004748 ... P50621 40075098
    945016 9byd:D (4.2) BS01 MN N/A GO:0004748 ... P50621 40075098
    945017 9byd:D (4.2) BS02 MN N/A GO:0004748 ... P50621 40075098
    945018 9byg:A (3.77) BS01 TTP N/A GO:0004748 ... P50620 40075098
    945019 9byg:A (3.77) BS02 ATP N/A GO:0004748 ... P50620 40075098
    945020 9byg:A (3.77) BS03 DGI N/A GO:0004748 ... P50620 40075098
    945021 9byg:A (3.77) BS04 TTP N/A GO:0004748 ... P50620 40075098
    945022 9byg:B (3.77) BS01 TTP N/A GO:0004748 ... P50620 40075098
    945023 9byg:B (3.77) BS02 TTP N/A GO:0004748 ... P50620 40075098
    945024 9byg:B (3.77) BS03 ATP N/A GO:0004748 ... P50620 40075098
    945025 9byg:B (3.77) BS04 DGI N/A GO:0004748 ... P50620 40075098
    945026 9byg:C (3.77) BS01 MN N/A GO:0004748 ... P50621 40075098
    945027 9byg:C (3.77) BS02 MN N/A GO:0004748 ... P50621 40075098
    945028 9byg:D (3.77) BS01 MN N/A GO:0004748 ... P50621 40075098
    945029 9byg:D (3.77) BS02 MN N/A GO:0004748 ... P50621 40075098
    945030 9byh:A (2.53) BS01 peptide N/A GO:0004748 ... P50620 40075098
    945031 9byh:A (2.53) BS02 ATP N/A GO:0004748 ... P50620 40075098
    945032 9byh:A (2.53) BS03 GDP N/A GO:0004748 ... P50620 40075098
    945033 9byh:A (2.53) BS04 TTP N/A GO:0004748 ... P50620 40075098
    945034 9byh:A (2.53) BS05 TTP N/A GO:0004748 ... P50620 40075098
    945035 9byh:B (2.53) BS01 peptide N/A GO:0004748 ... P50620 40075098
    945036 9byh:B (2.53) BS02 TTP N/A GO:0004748 ... P50620 40075098
    945037 9byh:B (2.53) BS03 TTP N/A GO:0004748 ... P50620 40075098
    945038 9byh:B (2.53) BS04 ATP N/A GO:0004748 ... P50620 40075098
    945039 9byh:B (2.53) BS05 GDP N/A GO:0004748 ... P50620 40075098
    945040 9byi:A (2.95) BS01 EIC N/A GO:0005267 ... Q9HB14 40011746
    945041 9byi:A (2.95) BS02 K N/A GO:0005267 ... Q9HB14 40011746
    945042 9byi:A (2.95) BS03 K N/A GO:0005267 ... Q9HB14 40011746
    945043 9byi:A (2.95) BS04 K N/A GO:0005267 ... Q9HB14 40011746
    945044 9byi:U (2.95) BS01 K N/A GO:0005267 ... Q9HB14 40011746
    945045 9byi:U (2.95) BS02 K N/A GO:0005267 ... Q9HB14 40011746
    945046 9byi:U (2.95) BS03 K N/A GO:0005267 ... Q9HB14 40011746
    945047 9byj:A (1.8) BS01 VSE N/A GO:0004672 ... P08631 39315638
    945048 9byk:A (3.03) BS01 ATP N/A GO:0005524 ... A0A8D1XYK3 N/A
    945049 9byk:B (3.03) BS01 ATP N/A GO:0005524 ... A0A8D1XYK3 N/A
    945050 9byk:C (3.03) BS01 ATP N/A GO:0005524 ... A0A8D1XYK3 N/A
    945051 9byk:D (3.03) BS01 ATP N/A GO:0005524 ... A0A8D1JU29 N/A
    945052 9byk:D (3.03) BS02 ADP N/A GO:0005524 ... A0A8D1JU29 N/A
    945053 9byk:E (3.03) BS01 ATP N/A GO:0005524 ... A0A8D1JU29 N/A
    945054 9byk:F (3.03) BS01 ADP N/A GO:0005524 ... A0A8D1JU29 N/A
    945055 9byk:a (3.03) BS01 peptide N/A GO:0005743 ... Q35915 N/A
    945056 9byk:i (3.03) BS01 peptide N/A GO:0005739 ... A0A4X1TQQ5 N/A
    945057 9byl:A (2.99) BS01 ATP N/A GO:0004748 ... P50620 40075098
    945058 9byl:A (2.99) BS02 GDP N/A GO:0004748 ... P50620 40075098
    945059 9byl:A (2.99) BS03 TTP N/A GO:0004748 ... P50620 40075098
    945060 9byl:A (2.99) BS04 TTP N/A GO:0004748 ... P50620 40075098
    945061 9byl:B (2.99) BS01 TTP N/A GO:0004748 ... P50620 40075098
    945062 9byl:B (2.99) BS02 TTP N/A GO:0004748 ... P50620 40075098
    945063 9byl:B (2.99) BS03 ATP N/A GO:0004748 ... P50620 40075098
    945064 9byl:B (2.99) BS04 GDP N/A GO:0004748 ... P50620 40075098
    945065 9byl:C (2.99) BS01 MN N/A GO:0004748 ... P50621 40075098
    945066 9byl:C (2.99) BS02 MN N/A GO:0004748 ... P50621 40075098
    945067 9byl:D (2.99) BS01 MN N/A GO:0004748 ... P50621 40075098
    945068 9byl:D (2.99) BS02 MN N/A GO:0004748 ... P50621 40075098
    945069 9bym:A (3.11) BS01 ATP N/A GO:0005524 ... A0A8D1XYK3 N/A
    945070 9bym:B (3.11) BS01 ATP N/A GO:0005524 ... A0A8D1XYK3 N/A
    945071 9bym:C (3.11) BS01 ATP N/A GO:0005524 ... A0A8D1XYK3 N/A
    945072 9bym:D (3.11) BS01 ATP N/A GO:0005524 ... A0A8D1JU29 N/A
    945073 9bym:D (3.11) BS02 ADP N/A GO:0005524 ... A0A8D1JU29 N/A
    945074 9bym:E (3.11) BS01 ATP N/A GO:0005524 ... A0A8D1JU29 N/A
    945075 9bym:F (3.11) BS01 ADP N/A GO:0005524 ... A0A8D1JU29 N/A
    945076 9byp:A (2.2) BS01 dna N/A GO:0003677 ... P03227 N/A
    945077 9byp:A (2.2) BS02 ZN N/A GO:0003677 ... P03227 N/A
    945078 9byq:A (2.2) BS01 dna N/A GO:0003677 ... P03227 N/A
    945079 9byq:A (2.2) BS02 dna N/A GO:0003677 ... P03227 N/A
    945080 9byq:A (2.2) BS03 ZN N/A GO:0003677 ... P03227 N/A
    945081 9byq:D (2.2) BS01 dna N/A GO:0003677 ... P03227 N/A
    945082 9byq:D (2.2) BS02 dna N/A GO:0003677 ... P03227 N/A
    945083 9byq:D (2.2) BS03 ZN N/A GO:0003677 ... P03227 N/A
    945084 9byr:B (7.75) BS01 dna N/A GO:0003677 ... P03227 N/A
    945085 9byr:B (7.75) BS02 dna N/A GO:0003677 ... P03227 N/A
    945086 9byr:B (7.75) BS03 ZN N/A GO:0003677 ... P03227 N/A
    945087 9byr:C (7.75) BS01 dna N/A GO:0003677 ... P03227 N/A
    945088 9byr:C (7.75) BS02 dna N/A GO:0003677 ... P03227 N/A
    945089 9byr:C (7.75) BS03 ZN N/A GO:0003677 ... P03227 N/A
    945090 9byr:D (7.75) BS01 dna N/A GO:0003677 ... P03227 N/A
    945091 9byr:D (7.75) BS02 dna N/A GO:0003677 ... P03227 N/A
    945092 9byr:D (7.75) BS03 ZN N/A GO:0003677 ... P03227 N/A
    945093 9byr:E (7.75) BS01 dna N/A GO:0003677 ... P03227 N/A
    945094 9byr:E (7.75) BS02 dna N/A GO:0003677 ... P03227 N/A
    945095 9byr:E (7.75) BS03 ZN N/A GO:0003677 ... P03227 N/A
    945096 9byr:F (7.75) BS01 dna N/A GO:0003677 ... P03227 N/A
    945097 9byr:F (7.75) BS02 dna N/A GO:0003677 ... P03227 N/A
    945098 9byr:F (7.75) BS03 ZN N/A GO:0003677 ... P03227 N/A
    945099 9byr:G (7.75) BS01 dna N/A GO:0003677 ... P03227 N/A
    945100 9byr:G (7.75) BS02 dna N/A GO:0003677 ... P03227 N/A
    945101 9byr:G (7.75) BS03 ZN N/A GO:0003677 ... P03227 N/A
    945102 9byr:H (7.75) BS01 dna N/A GO:0003677 ... P03227 N/A
    945103 9byr:H (7.75) BS02 dna N/A GO:0003677 ... P03227 N/A
    945104 9byr:H (7.75) BS03 ZN N/A GO:0003677 ... P03227 N/A
    945105 9byr:I (7.75) BS01 dna N/A GO:0003677 ... P03227 N/A
    945106 9byr:I (7.75) BS02 dna N/A GO:0003677 ... P03227 N/A
    945107 9byr:I (7.75) BS03 ZN N/A GO:0003677 ... P03227 N/A
    945108 9byr:J (7.75) BS01 dna N/A GO:0003677 ... P03227 N/A
    945109 9byr:J (7.75) BS02 dna N/A GO:0003677 ... P03227 N/A
    945110 9byr:J (7.75) BS03 ZN N/A GO:0003677 ... P03227 N/A
    945111 9byr:K (7.75) BS01 dna N/A GO:0003677 ... P03227 N/A
    945112 9byr:K (7.75) BS02 dna N/A GO:0003677 ... P03227 N/A
    945113 9byr:K (7.75) BS03 ZN N/A GO:0003677 ... P03227 N/A
    945114 9byr:L (7.75) BS01 dna N/A GO:0003677 ... P03227 N/A
    945115 9byr:L (7.75) BS02 dna N/A GO:0003677 ... P03227 N/A
    945116 9byr:L (7.75) BS03 ZN N/A GO:0003677 ... P03227 N/A
    945117 9byr:N (7.75) BS01 dna N/A GO:0003677 ... P03227 N/A
    945118 9byr:N (7.75) BS02 dna N/A GO:0003677 ... P03227 N/A
    945119 9byr:N (7.75) BS03 ZN N/A GO:0003677 ... P03227 N/A
    945120 9byr:O (7.75) BS01 dna N/A GO:0003677 ... P03227 N/A
    945121 9byr:O (7.75) BS02 dna N/A GO:0003677 ... P03227 N/A
    945122 9byr:O (7.75) BS03 ZN N/A GO:0003677 ... P03227 N/A
    945123 9byr:P (7.75) BS01 dna N/A GO:0003677 ... P03227 N/A
    945124 9byr:P (7.75) BS02 dna N/A GO:0003677 ... P03227 N/A
    945125 9byr:P (7.75) BS03 ZN N/A GO:0003677 ... P03227 N/A
    945126 9byr:Q (7.75) BS01 dna N/A GO:0003677 ... P03227 N/A
    945127 9byr:Q (7.75) BS02 dna N/A GO:0003677 ... P03227 N/A
    945128 9byr:Q (7.75) BS03 ZN N/A GO:0003677 ... P03227 N/A
    945129 9byr:R (7.75) BS01 dna N/A GO:0003677 ... P03227 N/A
    945130 9byr:R (7.75) BS02 dna N/A GO:0003677 ... P03227 N/A
    945131 9byr:R (7.75) BS03 ZN N/A GO:0003677 ... P03227 N/A
    945132 9byr:S (7.75) BS01 dna N/A GO:0003677 ... P03227 N/A
    945133 9byr:S (7.75) BS02 dna N/A GO:0003677 ... P03227 N/A
    945134 9byr:S (7.75) BS03 ZN N/A GO:0003677 ... P03227 N/A
    945135 9byr:T (7.75) BS01 dna N/A GO:0003677 ... P03227 N/A
    945136 9byr:T (7.75) BS02 dna N/A GO:0003677 ... P03227 N/A
    945137 9byr:T (7.75) BS03 ZN N/A GO:0003677 ... P03227 N/A
    945138 9byr:U (7.75) BS01 dna N/A GO:0003677 ... P03227 N/A
    945139 9byr:U (7.75) BS02 dna N/A GO:0003677 ... P03227 N/A
    945140 9byr:U (7.75) BS03 ZN N/A GO:0003677 ... P03227 N/A
    945141 9byr:V (7.75) BS01 dna N/A GO:0003677 ... P03227 N/A
    945142 9byr:V (7.75) BS02 dna N/A GO:0003677 ... P03227 N/A
    945143 9byr:V (7.75) BS03 ZN N/A GO:0003677 ... P03227 N/A
    945144 9byr:W (7.75) BS01 dna N/A GO:0003677 ... P03227 N/A
    945145 9byr:W (7.75) BS02 dna N/A GO:0003677 ... P03227 N/A
    945146 9byr:W (7.75) BS03 ZN N/A GO:0003677 ... P03227 N/A
    945147 9byr:X (7.75) BS01 dna N/A GO:0003677 ... P03227 N/A
    945148 9byr:X (7.75) BS02 dna N/A GO:0003677 ... P03227 N/A
    945149 9byr:X (7.75) BS03 ZN N/A GO:0003677 ... P03227 N/A
    945150 9bys:A (3.1) BS01 Q87 N/A N/A Q95460 40570962
    945151 9byt:A (3.52) BS01 ATP N/A GO:0004748 ... P50620 40075098
    945152 9byt:A (3.52) BS02 GDP N/A GO:0004748 ... P50620 40075098
    945153 9byt:A (3.52) BS03 TTP N/A GO:0004748 ... P50620 40075098
    945154 9byt:A (3.52) BS04 TTP N/A GO:0004748 ... P50620 40075098
    945155 9byt:B (3.52) BS01 TTP N/A GO:0004748 ... P50620 40075098
    945156 9byt:B (3.52) BS02 TTP N/A GO:0004748 ... P50620 40075098
    945157 9byt:B (3.52) BS03 ATP N/A GO:0004748 ... P50620 40075098
    945158 9byt:B (3.52) BS04 GDP N/A GO:0004748 ... P50620 40075098
    945159 9byt:C (3.52) BS01 MN N/A GO:0004748 ... P50621 40075098
    945160 9byt:C (3.52) BS02 MN N/A GO:0004748 ... P50621 40075098
    945161 9byt:D (3.52) BS01 MN N/A GO:0004748 ... P50621 40075098
    945162 9byt:D (3.52) BS02 MN N/A GO:0004748 ... P50621 40075098
    945163 9byu:A (1.75) BS01 MG N/A GO:0005576 ... A0A1H8IKU3 39441250
    945164 9byv:A (3.83) BS01 ATP N/A GO:0004748 ... P50620 40075098
    945165 9byv:A (3.83) BS02 GDP N/A GO:0004748 ... P50620 40075098
    945166 9byv:A (3.83) BS03 TTP N/A GO:0004748 ... P50620 40075098
    945167 9byv:A (3.83) BS04 TTP N/A GO:0004748 ... P50620 40075098
    945168 9byv:B (3.83) BS01 TTP N/A GO:0004748 ... P50620 40075098
    945169 9byv:B (3.83) BS02 TTP N/A GO:0004748 ... P50620 40075098
    945170 9byv:B (3.83) BS03 ATP N/A GO:0004748 ... P50620 40075098
    945171 9byv:B (3.83) BS04 GDP N/A GO:0004748 ... P50620 40075098
    945172 9byv:C (3.83) BS01 MN N/A GO:0004748 ... P50621 40075098
    945173 9byv:C (3.83) BS02 MN N/A GO:0004748 ... P50621 40075098
    945174 9byv:D (3.83) BS01 MN N/A GO:0004748 ... P50621 40075098
    945175 9byv:D (3.83) BS02 MN N/A GO:0004748 ... P50621 40075098
    945176 9byw:A (4.64) BS01 ATP N/A GO:0004748 ... P50620 40075098
    945177 9byw:A (4.64) BS02 GDP N/A GO:0004748 ... P50620 40075098
    945178 9byw:A (4.64) BS03 TTP N/A GO:0004748 ... P50620 40075098
    945179 9byw:A (4.64) BS04 TTP N/A GO:0004748 ... P50620 40075098
    945180 9byw:B (4.64) BS01 TTP N/A GO:0004748 ... P50620 40075098
    945181 9byw:B (4.64) BS02 TTP N/A GO:0004748 ... P50620 40075098
    945182 9byw:B (4.64) BS03 ATP N/A GO:0004748 ... P50620 40075098
    945183 9byw:B (4.64) BS04 GDP N/A GO:0004748 ... P50620 40075098
    945184 9byw:C (4.64) BS01 MN N/A GO:0004748 ... P50621 40075098
    945185 9byw:C (4.64) BS02 MN N/A GO:0004748 ... P50621 40075098
    945186 9byw:D (4.64) BS01 MN N/A GO:0004748 ... P50621 40075098
    945187 9byw:D (4.64) BS02 MN N/A GO:0004748 ... P50621 40075098
    945188 9byx:A (3.94) BS01 ATP N/A GO:0004748 ... P50620 40075098
    945189 9byx:A (3.94) BS02 GDP N/A GO:0004748 ... P50620 40075098
    945190 9byx:A (3.94) BS03 TTP N/A GO:0004748 ... P50620 40075098
    945191 9byx:A (3.94) BS04 TTP N/A GO:0004748 ... P50620 40075098
    945192 9byx:B (3.94) BS01 TTP N/A GO:0004748 ... P50620 40075098
    945193 9byx:B (3.94) BS02 TTP N/A GO:0004748 ... P50620 40075098
    945194 9byx:B (3.94) BS03 ATP N/A GO:0004748 ... P50620 40075098
    945195 9byx:B (3.94) BS04 GDP N/A GO:0004748 ... P50620 40075098
    945196 9byx:C (3.94) BS01 MN N/A GO:0004748 ... P50621 40075098
    945197 9byx:C (3.94) BS02 MN N/A GO:0004748 ... P50621 40075098
    945198 9byx:D (3.94) BS01 MN N/A GO:0004748 ... P50621 40075098
    945199 9byx:D (3.94) BS02 MN N/A GO:0004748 ... P50621 40075098
    945200 9byy:A (4.07) BS01 ATP N/A GO:0004748 ... P50620 40075098

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).