SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    94401 2kmn:A (-1.00) BS01 ZN 3.5.1.88 GO:0042586 ... P0A6K3 N/A
    94402 2kmn:A (-1.00) BS02 BB2 3.5.1.88 GO:0042586 ... P0A6K3 N/A
    94403 2kmx:A (-1.00) BS01 ATP 7.2.2.8 GO:0000166 ... Q04656 19917612
    94404 2kmy:A (-1.00) BS01 HEC ? GO:0009055 ... B8J2Z0 20886839
    94405 2kmy:A (-1.00) BS02 HEC ? GO:0009055 ... B8J2Z0 20886839
    94406 2kmy:A (-1.00) BS03 HEC ? GO:0009055 ... B8J2Z0 20886839
    94407 2kmy:A (-1.00) BS04 HEC ? GO:0009055 ... B8J2Z0 20886839
    94408 2kn2:A (-1.00) BS01 CA ? GO:0005509 ... Q39890 19667066
    94409 2kn2:A (-1.00) BS02 CA ? GO:0005509 ... Q39890 19667066
    94410 2kn7:A (-1.00) BS01 dna 3.1.-.- N/A Q92889 22483113
    94411 2kn7:D (-1.00) BS01 dna 3.1.-.- N/A Q92889 22483113
    94412 2kn9:A (-1.00) BS01 ZN ? GO:0005506 ... O05893 21904065
    94413 2kne:A (-1.00) BS01 peptide ? GO:0000922 ... P0DP23 19996092
    94414 2kne:A (-1.00) BS02 CA ? GO:0000922 ... P0DP23 19996092
    94415 2kne:A (-1.00) BS03 CA ? GO:0000922 ... P0DP23 19996092
    94416 2kne:A (-1.00) BS04 CA ? GO:0000922 ... P0DP23 19996092
    94417 2kne:A (-1.00) BS05 CA ? GO:0000922 ... P0DP23 19996092
    94418 2knh:A (-1.00) BS01 peptide ? GO:0003714 ... Q06455 19204326
    94419 2knt:A (1.2) BS01 PO4 ? GO:0004867 ... P12111 9761897
    94420 2knx:A (-1.00) BS01 CA ? N/A Q07954 20303980
    94421 2kny:A (-1.00) BS01 CA ? N/A P02649
    Q07954
    20303980
    94422 2ko0:A (-1.00) BS01 dna ? GO:0043565 ... Q9NVV9 20144952
    94423 2ko0:A (-1.00) BS02 dna ? GO:0043565 ... Q9NVV9 20144952
    94424 2ko0:A (-1.00) BS03 ZN ? GO:0043565 ... Q9NVV9 20144952
    94425 2ko7:A (-1.00) BS01 JZF 5.2.1.8 GO:0003755 ... Q63J95 21574961
    94426 2ko8:A () BS01 ZN ? N/A N/A N/A
    94427 2ko8:B () BS01 ZN ? N/A N/A N/A
    94428 2ko8:C () BS01 ZN ? N/A N/A N/A
    94429 2koh:A (-1.00) BS01 peptide ? N/A Q99NH2 20047332
    94430 2koo:A (-1.00) BS01 SXH ? GO:0000035 ... P72393 20659690
    94431 2kop:A (-1.00) BS01 SYO ? GO:0000035 ... P72393 20659690
    94432 2koq:A (-1.00) BS01 SHW ? GO:0000035 ... P72393 20659690
    94433 2kor:A (-1.00) BS01 SOO ? GO:0000035 ... P72393 20659690
    94434 2kos:A (-1.00) BS01 SXO ? GO:0000035 ... P72393 20659690
    94435 2kot:A (-1.00) BS01 ANW ? GO:0001819 ... Q99584 20178375
    94436 2kot:B (-1.00) BS01 ANW ? GO:0001819 ... Q99584 20178375
    94437 2kp8:A (-1.00) BS01 XIG N/A N/A N/A 20004576
    94438 2kp8:B (-1.00) BS01 XIG N/A N/A N/A 20004576
    94439 2kpi:A (-1.00) BS01 ZN ? N/A Q9KZL7 N/A
    94440 2kpl:A (-1.00) BS01 peptide ? N/A Q96QZ7 21238461
    94441 2kpn:A (-1.00) BS01 CA 3.4.24.28 GO:0005509 ... Q81D73 N/A
    94442 2kpz:A (-1.00) BS01 peptide 2.3.2.26 N/A P46934 N/A
    94443 2kq0:A (-1.00) BS01 peptide 2.3.2.26 N/A P46934 N/A
    94444 2kq9:A (-1.00) BS01 ZN ? GO:0008270 ... Q8UGY0 N/A
    94445 2kqb:A (-1.00) BS01 ZN 3.1.-.- GO:0003906 ... Q8IW19 20098424
    94446 2kqc:A (-1.00) BS01 ZN 3.1.-.- GO:0003906 ... Q8IW19 20098424
    94447 2kqd:A (-1.00) BS01 ZN 3.1.-.- GO:0003906 ... Q8IW19 20098424
    94448 2kqd:A (-1.00) BS02 ADN 3.1.-.- GO:0003906 ... Q8IW19 20098424
    94449 2kqd:A (-1.00) BS03 RIB 3.1.-.- GO:0003906 ... Q8IW19 20098424
    94450 2kqe:A (-1.00) BS01 ZN 3.1.-.- GO:0003906 ... Q8IW19 20098424
    94451 2kqe:A (-1.00) BS02 ADN 3.1.-.- GO:0003906 ... Q8IW19 20098424
    94452 2kqe:A (-1.00) BS03 RIB 3.1.-.- GO:0003906 ... Q8IW19 20098424
    94453 2kqf:A (-1.00) BS01 peptide 2.7.11.1 N/A Q6P0Q8 N/A
    94454 2kqq:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 N/A
    94455 2kqs:A (-1.00) BS01 peptide ? GO:0000122 ... P63165 21474068
    94456 2kr1:A (-1.00) BS01 ZN 2.3.2.26 N/A Q05086 21947926
    94457 2kr2:A (-1.00) BS01 GLC ? GO:0030246 ... Q6INX3 20466650
    94458 2kr5:A (-1.00) BS01 PNS 2.3.1.221 GO:0031177 ... Q12053 20136099
    94459 2krb:A (-1.00) BS01 peptide ? GO:0003676 ... P55884 N/A
    94460 2krd:C (-1.00) BS01 peptide ? GO:0005509 ... P63316 20116385
    94461 2krd:C (-1.00) BS02 CA ? GO:0005509 ... P63316 20116385
    94462 2krd:C (-1.00) BS03 WW7 ? GO:0005509 ... P63316 20116385
    94463 2kri:B (-1.00) BS01 CA ? N/A P01130 20223219
    94464 2krj:A (-1.00) BS01 CO 3.4.24.65 GO:0004222 ... P39900 20041641
    94465 2ks9:A (-1.00) BS01 peptide ? GO:0004930 ... P25103 20937248
    94466 2ksa:A (-1.00) BS01 peptide ? GO:0004930 ... P25103 20937248
    94467 2ksb:A (-1.00) BS01 peptide ? GO:0004930 ... P25103 20937248
    94468 2ksc:A (-1.00) BS01 HEB ? GO:0005344 ... Q8RT58 20669934
    94469 2ksp:A (-1.00) BS01 peptide ? GO:0005509 ... Q9H4M9 20106972
    94470 2ksp:A (-1.00) BS02 CA ? GO:0005509 ... Q9H4M9 20106972
    94471 2ksq:A (-1.00) BS01 MTN 3.6.5.2 GO:0003924 ... P11076 20601958
    94472 2ksq:A (-1.00) BS02 MTN 3.6.5.2 GO:0003924 ... P11076 20601958
    94473 2ksq:A (-1.00) BS03 GTP 3.6.5.2 GO:0003924 ... P11076 20601958
    94474 2ksu:A (-1.00) BS01 HEC ? GO:0009055 ... B8J2Z0 20886839
    94475 2ksu:A (-1.00) BS02 HEC ? GO:0009055 ... B8J2Z0 20886839
    94476 2ksu:A (-1.00) BS03 HEC ? GO:0009055 ... B8J2Z0 20886839
    94477 2ksu:A (-1.00) BS04 HEC ? GO:0009055 ... B8J2Z0 20886839
    94478 2ksy:A (-1.00) BS01 RET N/A GO:0005216 ... N/A 20512150
    94479 2ksz:A (-1.00) BS01 MG ? GO:0005509 ... Q39890 20054830
    94480 2ksz:A (-1.00) BS02 MG ? GO:0005509 ... Q39890 20054830
    94481 2kt4:B (-1.00) BS01 EB4 ? GO:0005576 ... Q9I9P7 20826777
    94482 2ktb:B (-1.00) BS01 peptide ? GO:0006338 ... Q86U86 20368734
    94483 2ktd:A (-1.00) BS01 PUC 5.3.99.2 GO:0001516 ... O09114 N/A
    94484 2ktq:A (2.3) BS01 dna 2.7.7.7 GO:0001882 ... P19821 9857206
    94485 2ktq:A (2.3) BS02 dna 2.7.7.7 GO:0001882 ... P19821 9857206
    94486 2ktq:A (2.3) BS03 MG 2.7.7.7 GO:0001882 ... P19821 9857206
    94487 2ktq:A (2.3) BS04 DCT 2.7.7.7 GO:0001882 ... P19821 9857206
    94488 2ku3:A (-1.00) BS01 ZN ? N/A O95696 N/A
    94489 2ku3:A (-1.00) BS02 ZN ? N/A O95696 N/A
    94490 2kug:A (-1.00) BS01 CA ? GO:0000922 ... P0DP23 N/A
    94491 2kug:A (-1.00) BS02 CA ? GO:0000922 ... P0DP23 N/A
    94492 2kug:A (-1.00) BS03 HLT ? GO:0000922 ... P0DP23 N/A
    94493 2kuh:A (-1.00) BS01 CA ? GO:0005509 ... P0DP23 N/A
    94494 2kuh:A (-1.00) BS02 CA ? GO:0005509 ... P0DP23 N/A
    94495 2kuh:A (-1.00) BS03 HLT ? GO:0005509 ... P0DP23 N/A
    94496 2kuo:A (-1.00) BS01 ZN 3.1.-.- GO:0003906 ... Q8IW19 N/A
    94497 2kuo:A (-1.00) BS02 ZN 3.1.-.- GO:0003906 ... Q8IW19 N/A
    94498 2kup:A (-1.00) BS01 peptide ? N/A O43559 20454865
    94499 2kvm:A (-1.00) BS01 peptide ? GO:0035102 ... Q8VDS3 20541999
    94500 2kwf:A (-1.00) BS01 peptide 2.3.1.-
    2.3.1.48
    GO:0003712 ... Q92793 N/A
    94501 2kwi:A (-1.00) BS01 GNP 3.6.5.2 GO:0003924 ... P11234 20696399
    94502 2kwi:A (-1.00) BS02 MG 3.6.5.2 GO:0003924 ... P11234 20696399
    94503 2kwj:A (-1.00) BS01 peptide ? N/A Q92784 20613843
    94504 2kwj:A (-1.00) BS02 ZN ? N/A Q92784 20613843
    94505 2kwj:A (-1.00) BS03 ZN ? N/A Q92784 20613843
    94506 2kwj:A (-1.00) BS04 ZN ? N/A Q92784 20613843
    94507 2kwj:A (-1.00) BS05 ZN ? N/A Q92784 20613843
    94508 2kwk:A (-1.00) BS01 peptide ? N/A Q92784 20613843
    94509 2kwk:A (-1.00) BS02 ZN ? N/A Q92784 20613843
    94510 2kwk:A (-1.00) BS03 ZN ? N/A Q92784 20613843
    94511 2kwk:A (-1.00) BS04 ZN ? N/A Q92784 20613843
    94512 2kwk:A (-1.00) BS05 ZN ? N/A Q92784 20613843
    94513 2kwn:A (-1.00) BS01 peptide ? N/A Q92784 20613843
    94514 2kwn:A (-1.00) BS02 ZN ? N/A Q92784 20613843
    94515 2kwn:A (-1.00) BS03 ZN ? N/A Q92784 20613843
    94516 2kwn:A (-1.00) BS04 ZN ? N/A Q92784 20613843
    94517 2kwn:A (-1.00) BS05 ZN ? N/A Q92784 20613843
    94518 2kwo:A (-1.00) BS01 peptide ? N/A Q92784 20613843
    94519 2kwo:A (-1.00) BS02 ZN ? N/A Q92784 20613843
    94520 2kwo:A (-1.00) BS03 ZN ? N/A Q92784 20613843
    94521 2kwo:A (-1.00) BS04 ZN ? N/A Q92784 20613843
    94522 2kwo:A (-1.00) BS05 ZN ? N/A Q92784 20613843
    94523 2kwq:A (-1.00) BS01 ZN ? GO:0003690 ... Q5EAW4 20489205
    94524 2kwq:A (-1.00) BS02 ZN ? GO:0003690 ... Q5EAW4 20489205
    94525 2kxc:A (-1.00) BS01 peptide ? N/A Q9UHR4 21098279
    94526 2kxk:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 N/A
    94527 2kxn:B (-1.00) BS01 rna ? GO:0003676 ... P62995 21399644
    94528 2kxq:A (-1.00) BS01 peptide 2.3.2.26 N/A Q9HAU4 20937913
    94529 2kxv:A (-1.00) BS01 CA N/A N/A N/A 21112337
    94530 2kxv:A (-1.00) BS02 CA N/A N/A N/A 21112337
    94531 2kxw:A (-1.00) BS01 peptide ? GO:0005509 ... P07463 21439835
    94532 2ky8:A (-1.00) BS01 dna ? GO:0003677 ... Q5EFL0 21531701
    94533 2ky8:A (-1.00) BS02 dna ? GO:0003677 ... Q5EFL0 21531701
    94534 2kyf:A (-1.00) BS01 CA ? GO:0005509 ... P43305 21287610
    94535 2kyf:A (-1.00) BS02 CA ? GO:0005509 ... P43305 21287610
    94536 2kyl:A (-1.00) BS01 peptide 2.7.11.1 N/A Q6P0Q8 N/A
    94537 2kym:A (-1.00) BS01 peptide ? N/A A5E3P5 N/A
    94538 2kyu:A (-1.00) BS01 ZN 2.1.1.-
    2.1.1.364
    N/A Q03164 20677832
    94539 2kyu:A (-1.00) BS02 ZN 2.1.1.-
    2.1.1.364
    N/A Q03164 20677832
    94540 2kz2:A (-1.00) BS01 CA ? GO:0005509 ... P62149 21482808
    94541 2kz2:A (-1.00) BS02 CA ? GO:0005509 ... P62149 21482808
    94542 2kzm:A (2.6) BS01 dna 2.7.7.7 GO:0003676 ... P00582 9888810
    94543 2kzm:A (2.6) BS02 ZN 2.7.7.7 GO:0003676 ... P00582 9888810
    94544 2kzu:A (-1.00) BS01 peptide ? N/A Q9UER7 21134643
    94545 2kzy:A (-1.00) BS01 ZN ? GO:0003677 ... B5DF11 N/A
    94546 2kzz:A (2.25) BS01 dna 2.7.7.7 GO:0003676 ... P00582 9888810
    94547 2kzz:A (2.25) BS02 ZN 2.7.7.7 GO:0003676 ... P00582 9888810
    94548 2kzz:A (2.25) BS03 ZN 2.7.7.7 GO:0003676 ... P00582 9888810
    94549 2l00:A (-1.00) BS01 ZN ? GO:0003677 ... B5DF11 N/A
    94550 2l0b:A (-1.00) BS01 ZN 2.3.2.27 N/A Q8NG27 N/A
    94551 2l0b:A (-1.00) BS02 ZN 2.3.2.27 N/A Q8NG27 N/A
    94552 2l0i:A (-1.00) BS01 peptide ? GO:0031124 ... Q05543 20818393
    94553 2l0x:A (-1.00) BS01 MG 3.6.5.- GO:0000139 ... Q62639 20685651
    94554 2l0x:A (-1.00) BS02 GDP 3.6.5.- GO:0000139 ... Q62639 20685651
    94555 2l0y:A (-1.00) BS01 peptide ? GO:0005515 ... Q8N4Q1 21059946
    94556 2l0z:A (-1.00) BS01 ZN ? GO:0019031 ... P26313 21068387
    94557 2l0z:A (-1.00) BS02 ZN ? GO:0019031 ... P26313 21068387
    94558 2l11:A (-1.00) BS01 peptide ? N/A Q13185 21047797
    94559 2l12:A (-1.00) BS01 peptide ? GO:0035102 ... O95931 21047797
    94560 2l1b:A (-1.00) BS01 peptide ? GO:0035102 ... O95931 21047797
    94561 2l1c:A (-1.00) BS01 peptide ? GO:0035556 ... P29353 20739287
    94562 2l1g:A (-1.00) BS01 dna ? GO:0043565 ... Q9NVV9 N/A
    94563 2l1g:A (-1.00) BS02 dna ? GO:0043565 ... Q9NVV9 N/A
    94564 2l1g:A (-1.00) BS03 ZN ? GO:0043565 ... Q9NVV9 N/A
    94565 2l1l:B (-1.00) BS01 peptide ? GO:0005049 ... O14980 20972448
    94566 2l1o:A (-1.00) BS01 CD ? N/A Q38895 21618209
    94567 2l1r:A (-1.00) BS01 peptide ? GO:0005509 ... P63316 20801130
    94568 2l1r:A (-1.00) BS02 CA ? GO:0005509 ... P63316 20801130
    94569 2l1r:A (-1.00) BS03 SXK ? GO:0005509 ... P63316 20801130
    94570 2l1w:A (-1.00) BS01 peptide ? GO:0005509 ... Q39890 N/A
    94571 2l1w:A (-1.00) BS02 CA ? GO:0005509 ... Q39890 N/A
    94572 2l1w:A (-1.00) BS03 CA ? GO:0005509 ... Q39890 N/A
    94573 2l1w:A (-1.00) BS04 CA ? GO:0005509 ... Q39890 N/A
    94574 2l1w:A (-1.00) BS05 CA ? GO:0005509 ... Q39890 N/A
    94575 2l1y:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 N/A
    94576 2l1z:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 N/A
    94577 2l2i:A (-1.00) BS01 peptide ? N/A P32776 N/A
    94578 2l2k:B (-1.00) BS01 rna 3.5.4.37 N/A Q91ZS8 20946981
    94579 2l2s:A (-1.00) BS01 L2S 5.2.1.8 GO:0003755 ... Q3JK38 N/A
    94580 2l30:A (-1.00) BS01 ZN 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 21262234
    94581 2l31:A (-1.00) BS01 ZN 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 21262234
    94582 2l3c:A (-1.00) BS01 rna 3.5.4.37 N/A P51400 20946981
    94583 2l3j:A (-1.00) BS01 rna 3.5.4.37 N/A P51400 20946981
    94584 2l3r:A (-1.00) BS01 peptide 2.3.2.27 N/A Q96T88 21489993
    94585 2l41:A (-1.00) BS01 rna ? GO:0003676 ... P38996 21084293
    94586 2l43:A (-1.00) BS01 ZN ? N/A O95696
    P84243
    N/A
    94587 2l43:A (-1.00) BS02 ZN ? N/A O95696
    P84243
    N/A
    94588 2l47:A (-1.00) BS01 ZN 3.5.1.28 GO:0008745 ... Q8LTE6 N/A
    94589 2l4d:A (-1.00) BS01 HEC ? GO:0009055 ... Q88I19 21181421
    94590 2l4h:A (-1.00) BS01 CA ? GO:0000287 ... Q99828 21388953
    94591 2l4h:A (-1.00) BS02 CA ? GO:0000287 ... Q99828 21388953
    94592 2l4i:A (-1.00) BS01 MG ? GO:0000287 ... Q99828 21388953
    94593 2l4k:A (-1.00) BS01 peptide ? N/A Q14451 22702899
    94594 2l4l:A (-1.00) BS01 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 21227929
    94595 2l4l:A (-1.00) BS02 ZN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 21227929
    94596 2l4l:A (-1.00) BS03 ZN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 21227929
    94597 2l4t:A (-1.00) BS01 peptide ? GO:0001650 ... O14907 21417405
    94598 2l4z:A (-1.00) BS01 ZN 3.1.-.- N/A P61969 23353824
    94599 2l4z:A (-1.00) BS02 ZN 3.1.-.- N/A P61969 23353824
    94600 2l51:A (-1.00) BS01 CA ? GO:0003723 ... Q96FQ6 21046186

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).