SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    94801 2lh3:A (2.0) BS01 HEM ? GO:0005634 ... P02240 N/A
    94802 2lh5:A (2.0) BS01 HEM ? GO:0005634 ... P02240 N/A
    94803 2lh6:A (2.0) BS01 HEM ? GO:0005634 ... P02240 N/A
    94804 2lh6:A (2.0) BS02 NIO ? GO:0005634 ... P02240 N/A
    94805 2lh7:A (2.0) BS01 HEM ? GO:0005634 ... P02240 N/A
    94806 2lh7:A (2.0) BS02 NBE ? GO:0005634 ... P02240 N/A
    94807 2lh8:A (-1.00) BS01 VIB ? GO:0016020 ... P04273 21848803
    94808 2lha:A (-1.00) BS01 IHP ? GO:0016020 ... P21579 22475172
    94809 2lhb:A (2.0) BS01 CYN ? GO:0005506 ... P02208 4032476
    94810 2lhb:A (2.0) BS02 HEM ? GO:0005506 ... P02208 4032476
    94811 2lhh:A (-1.00) BS01 CA ? GO:0005509 ... P06787 22280008
    94812 2lhh:A (-1.00) BS02 CA ? GO:0005509 ... P06787 22280008
    94813 2lhh:A (-1.00) BS03 CA ? GO:0005509 ... P06787 22280008
    94814 2lhi:A (-1.00) BS01 CA ?
    3.1.3.16
    GO:0000131 ... P06787
    P23287
    22280008
    94815 2lhi:A (-1.00) BS02 CA ?
    3.1.3.16
    GO:0000131 ... P06787
    P23287
    22280008
    94816 2lhi:A (-1.00) BS03 CA ?
    3.1.3.16
    GO:0000131 ... P06787
    P23287
    22280008
    94817 2lhn:A (-1.00) BS01 ZN ? GO:0008143 ... P32505 22560733
    94818 2lhn:A (-1.00) BS02 ZN ? GO:0008143 ... P32505 22560733
    94819 2lhn:A (-1.00) BS03 ZN ? GO:0008143 ... P32505 22560733
    94820 2li8:A (-1.00) BS01 rna ? GO:0003676 ... Q9H9Z2 22157959
    94821 2li8:A (-1.00) BS02 ZN ? GO:0003676 ... Q9H9Z2 22157959
    94822 2li8:A (-1.00) BS03 ZN ? GO:0003676 ... Q9H9Z2 22157959
    94823 2lig:A (2.0) BS01 ASP ? GO:0006935 ... P02941 1660187
    94824 2lig:A (2.0) BS02 PHN ? GO:0006935 ... P02941 1660187
    94825 2lig:B (2.0) BS01 ASP ? GO:0006935 ... P02941 1660187
    94826 2lig:B (2.0) BS02 PHN ? GO:0006935 ... P02941 1660187
    94827 2lip:A (2.1) BS01 CA 3.1.1.3 GO:0004806 ... P22088 9032074
    94828 2liq:A (-1.00) BS01 MAG ? N/A B3GA02 22615566
    94829 2liq:A (-1.00) BS02 FUC ? N/A B3GA02 22615566
    94830 2lir:A (-1.00) BS01 HEC ? GO:0005515 ... P00044 22087268
    94831 2lit:A (-1.00) BS01 HEC ? GO:0005515 ... P00044 22087268
    94832 2liw:A (-1.00) BS01 PNS ? GO:0031177 ... Q6DNF2 22103656
    94833 2ljx:A (-1.00) BS01 ZN ? N/A P03126 22483108
    94834 2ljy:A (-1.00) BS01 ZN ? N/A P03126 22483108
    94835 2ljy:B (-1.00) BS01 ZN ? N/A P03126 22483108
    94836 2ljz:A (-1.00) BS01 ZN ? N/A P03126 22483108
    94837 2lk0:A (-1.00) BS01 ZN ? N/A P52756 22162216
    94838 2lk1:A (-1.00) BS01 AQN ? N/A P52756 22162216
    94839 2lk1:A (-1.00) BS02 ZN ? N/A P52756 22162216
    94840 2lk5:A (-1.00) BS01 ZN ? GO:0005506 ... P00273 N/A
    94841 2lk5:B (-1.00) BS01 ZN ? GO:0005506 ... P00273 N/A
    94842 2lkd:A (-1.00) BS01 GDP ? GO:0003924 ... P04766 22308033
    94843 2lki:A (-1.00) BS01 PNS ? N/A Q82SY3 16741959
    94844 2lkk:A (-1.00) BS01 OLA ? GO:0003682 ... P07148 22713574 BindingDB: Kd=900nM
    94845 2lkk:A (-1.00) BS02 OLA ? GO:0003682 ... P07148 22713574 BindingDB: Kd=900nM
    94846 2lko:A (-1.00) BS01 4IP ? GO:0007229 ... Q96AC1 22030399
    94847 2lkx:A (-1.00) BS01 dna ? GO:0000981 ... Q99697 15895993
    94848 2lkx:A (-1.00) BS02 dna ? GO:0000981 ... Q99697 15895993
    94849 2ll4:M (-1.00) BS01 GAL ? GO:0005576 ... Q9XZH7 22399295
    94850 2ll6:A (-1.00) BS01 peptide ? GO:0000922 ... P0DP23 22486744
    94851 2ll7:A (-1.00) BS01 peptide ? GO:0000922 ... P0DP23 22486744
    94852 2ll8:A (-1.00) BS01 PNS ? GO:0000035 ... Q6N882 22876860
    94853 2lli:A (-1.00) BS01 ZN ? GO:0003676 ... Q12476 22402490
    94854 2lli:A (-1.00) BS02 ZN ? GO:0003676 ... Q12476 22402490
    94855 2lli:A (-1.00) BS03 ZN ? GO:0003676 ... Q12476 22402490
    94856 2lli:A (-1.00) BS04 ZN ? GO:0003676 ... Q12476 22402490
    94857 2llo:A (-1.00) BS01 peptide ? GO:0005509 ... P0DP33 22275375
    94858 2llo:A (-1.00) BS02 CA ? GO:0005509 ... P0DP33 22275375
    94859 2llo:A (-1.00) BS03 CA ? GO:0005509 ... P0DP33 22275375
    94860 2llq:A (-1.00) BS01 peptide ? GO:0005509 ... P0DP33 22275375
    94861 2llq:A (-1.00) BS02 CA ? GO:0005509 ... P0DP33 22275375
    94862 2llq:A (-1.00) BS03 CA ? GO:0005509 ... P0DP33 22275375
    94863 2lm5:A (-1.00) BS01 CA ? GO:0000287 ... Q99828 22283712
    94864 2lm5:A (-1.00) BS02 CA ? GO:0000287 ... Q99828 22283712
    94865 2lml:A (-1.00) BS01 PNS ? N/A Q39T60 21235239
    94866 2lmt:A (-1.00) BS01 CA ? GO:0000226 ... P49258 22851764
    94867 2lmt:A (-1.00) BS02 CA ? GO:0000226 ... P49258 22851764
    94868 2lmu:A (-1.00) BS01 CA ? GO:0000226 ... P49258 22851764
    94869 2lmu:A (-1.00) BS02 CA ? GO:0000226 ... P49258 22851764
    94870 2lmv:A (-1.00) BS01 CA ? GO:0000226 ... P49258 22851764
    94871 2lmv:A (-1.00) BS02 CA ? GO:0000226 ... P49258 22851764
    94872 2lmv:A (-1.00) BS03 CA ? GO:0000226 ... P49258 22851764
    94873 2ln0:A (-1.00) BS01 ZN 2.3.1.48 N/A Q92794 22713874
    94874 2ln0:A (-1.00) BS02 ZN 2.3.1.48 N/A Q92794 22713874
    94875 2ln0:A (-1.00) BS03 ZN 2.3.1.48 N/A Q92794 22713874
    94876 2ln0:A (-1.00) BS04 ZN 2.3.1.48 N/A Q92794 22713874
    94877 2lnw:A (-1.00) BS01 peptide ? N/A P52735 22750419
    94878 2lo2:A (-1.00) BS01 ZN ? N/A Q03067 N/A
    94879 2lo3:A (-1.00) BS01 ZN ? N/A P53165 N/A
    94880 2lo6:A (-1.00) BS01 peptide ? N/A P53617 22892239
    94881 2lob:A (-1.00) BS01 peptide ? GO:0005794 ... Q9HD26 16331976
    94882 2lox:A (-1.00) BS01 peptide ? N/A P32776 22373916
    94883 2loz:A (-1.00) BS01 peptide 3.1.3.48 N/A Q63HR2 22645138
    94884 2lp0:A (-1.00) BS01 peptide ? GO:0000981 ... P31274 22615398
    94885 2lp2:A (-1.00) BS01 CA ? GO:0005509 ... P23297 23351007
    94886 2lp2:A (-1.00) BS02 CA ? GO:0005509 ... P23297 23351007
    94887 2lp2:B (-1.00) BS01 CA ? GO:0005509 ... P23297 23351007
    94888 2lp2:B (-1.00) BS02 CA ? GO:0005509 ... P23297 23351007
    94889 2lp3:A (-1.00) BS01 CA ? GO:0005509 ... P23297 23351007
    94890 2lp3:A (-1.00) BS02 CA ? GO:0005509 ... P23297 23351007
    94891 2lp3:B (-1.00) BS01 CA ? GO:0005509 ... P23297 23351007
    94892 2lp3:B (-1.00) BS02 CA ? GO:0005509 ... P23297 23351007
    94893 2lp8:A (-1.00) BS01 peptide ? GO:0042981 ... Q07817 22515821
    94894 2lpr:A (2.25) BS01 peptide 3.4.21.12 GO:0004252 ... P00778 1931963
    94895 2lq6:A (-1.00) BS01 ZN ? N/A O95696 22820306
    94896 2lq6:A (-1.00) BS02 ZN ? N/A O95696 22820306
    94897 2lqc:A (-1.00) BS01 peptide ? GO:0005509 ... P0DP23 22518098
    94898 2lqc:A (-1.00) BS02 CA ? GO:0005509 ... P0DP23 22518098
    94899 2lqc:A (-1.00) BS03 CA ? GO:0005509 ... P0DP23 22518098
    94900 2lqd:A (-1.00) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 22468842
    94901 2lqp:A (-1.00) BS01 CA N/A GO:0005509 ... P0DP23 22518098
    94902 2lqp:A (-1.00) BS02 CA N/A GO:0005509 ... P0DP23 22518098
    94903 2lri:C (-1.00) BS01 ZN ? N/A O43918 23074189
    94904 2lri:C (-1.00) BS02 ZN ? N/A O43918 23074189
    94905 2lro:A (-1.00) BS01 CA 3.2.1.4 GO:0008810 ... P16218 23356867
    94906 2lro:A (-1.00) BS02 CA 3.2.1.4 GO:0008810 ... P16218 23356867
    94907 2lrp:A (-1.00) BS01 CA 3.2.1.4 GO:0008810 ... P16218 23356867
    94908 2lrp:A (-1.00) BS02 CA 3.2.1.4 GO:0008810 ... P16218 23356867
    94909 2lrr:A (-1.00) BS01 DGP 3.6.4.12
    3.6.4.13
    GO:0003676 ... P38935 22999958
    94910 2lsi:A (-1.00) BS01 peptide 2.7.7.- N/A Q9UBZ9 N/A
    94911 2lsj:A (-1.00) BS01 peptide 2.7.7.- N/A Q920Q2 22700975
    94912 2lsk:A (-1.00) BS01 peptide 2.7.7.- N/A Q9UBZ9 22691049
    94913 2lsp:B (-1.00) BS01 peptide ? N/A O60885 22645123
    94914 2lsr:A (-1.00) BS01 peptide ? N/A Q9Y6N9 22879593
    94915 2lsv:A (-1.00) BS01 peptide ? GO:0000492 ... P25638 24012479
    94916 2lt7:A (-1.00) BS01 dna ? N/A Q86T24 22949637
    94917 2lt7:A (-1.00) BS02 dna ? N/A Q86T24 22949637
    94918 2lt7:A (-1.00) BS03 ZN ? N/A Q86T24 22949637
    94919 2lt7:A (-1.00) BS04 ZN ? N/A Q86T24 22949637
    94920 2lt7:A (-1.00) BS05 ZN ? N/A Q86T24 22949637
    94921 2ltn:A (1.7) BS01 MN ? GO:0030246 ... P02867 2708344
    94922 2ltn:A (1.7) BS02 CA ? GO:0030246 ... P02867 2708344
    94923 2ltn:C (1.7) BS01 MN ? GO:0030246 ... P02867 2708344
    94924 2ltn:C (1.7) BS02 CA ? GO:0030246 ... P02867 2708344
    94925 2lto:A (-1.00) BS01 peptide ? N/A Q9H7E2 23066109
    94926 2ltq:A (-1.00) BS01 UQ8 ? GO:0005515 ... P0A6M2 23416557
    94927 2ltt:A (-1.00) BS01 dna ? GO:0003677 ... Q9CIP3 23303792
    94928 2ltt:B (-1.00) BS01 dna ? GO:0003677 ... Q9CIP3 23303792
    94929 2ltv:A (-1.00) BS01 peptide ? N/A P46937 22921829
    94930 2ltw:A (-1.00) BS01 peptide ? N/A P46937 22921829
    94931 2ltx:A (-1.00) BS01 peptide 2.3.2.26 N/A Q9HCE7 22921829
    94932 2lty:A (-1.00) BS01 peptide 2.3.2.26
    2.3.2.36
    N/A Q96PU5 22921829
    94933 2ltz:A (-1.00) BS01 peptide 2.3.2.26 N/A Q9HAU4 22921829
    94934 2lu5:A (-1.00) BS01 CU 1.15.1.1 GO:0000303 ... P00441 22723345
    94935 2lua:A (-1.00) BS01 ZN 2.3.2.27 GO:0061630 ... P50534 23029009
    94936 2lua:A (-1.00) BS02 ZN 2.3.2.27 GO:0061630 ... P50534 23029009
    94937 2lua:A (-1.00) BS03 ZN 2.3.2.27 GO:0061630 ... P50534 23029009
    94938 2lue:A (-1.00) BS01 peptide ? GO:0000045 ... Q9GZQ8 23805866
    94939 2lul:A (-1.00) BS01 ZN 2.7.10.2 GO:0035556 ... P42680 N/A
    94940 2lup:B (-1.00) BS01 rna 3.1.26.3 GO:0003725 ... Q02555 21742266
    94941 2lux:A (-1.00) BS01 CA ? GO:0005509 ... P23297 N/A
    94942 2lux:A (-1.00) BS02 CA ? GO:0005509 ... P23297 N/A
    94943 2lux:B (-1.00) BS01 CA ? GO:0005509 ... P23297 N/A
    94944 2lux:B (-1.00) BS02 CA ? GO:0005509 ... P23297 N/A
    94945 2luy:A (-1.00) BS01 ZN ? N/A O94276 23613586
    94946 2luy:A (-1.00) BS02 ZN ? N/A O94276 23613586
    94947 2lv2:A (-1.00) BS01 ZN ? GO:0003700 ... Q01101 N/A
    94948 2lv2:A (-1.00) BS02 ZN ? GO:0003700 ... Q01101 N/A
    94949 2lv6:A (-1.00) BS01 peptide ? GO:0000922 ... P0DP23 22908850
    94950 2lv6:A (-1.00) BS02 CA ? GO:0000922 ... P0DP23 22908850
    94951 2lv6:A (-1.00) BS03 CA ? GO:0000922 ... P0DP23 22908850
    94952 2lv6:A (-1.00) BS04 CA ? GO:0000922 ... P0DP23 22908850
    94953 2lv6:A (-1.00) BS05 CA ? GO:0000922 ... P0DP23 22908850
    94954 2lv7:A (-1.00) BS01 CA ? GO:0005509 ... Q86V35 22989873
    94955 2lv7:A (-1.00) BS02 CA ? GO:0005509 ... Q86V35 22989873
    94956 2lv9:A (-1.00) BS01 ZN 2.1.1.43 N/A Q8IZD2 N/A
    94957 2lv9:A (-1.00) BS02 ZN 2.1.1.43 N/A Q8IZD2 N/A
    94958 2lvh:A (-1.00) BS01 ZN ? GO:0008270 ... Q70LE5 23326363
    94959 2lvj:A (-1.00) BS01 MG ? GO:0005509 ... O82040 23011803
    94960 2lvk:A (-1.00) BS01 CA ? GO:0005509 ... O82040 23011803
    94961 2lvk:A (-1.00) BS02 CA ? GO:0005509 ... O82040 23011803
    94962 2lvm:A (-1.00) BS01 peptide ? N/A Q12888 23377543
    94963 2lvr:A (-1.00) BS01 ZN ? N/A Q13105 22986688
    94964 2lvz:A (-1.00) BS01 LVZ 3.1.27.- GO:0001530 ... P12724 23025322
    94965 2lvz:A (-1.00) BS02 SGN 3.1.27.- GO:0001530 ... P12724 23025322
    94966 2lwi:A (-1.00) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 23630290
    94967 2lwi:A (-1.00) BS02 KOB 3.6.5.2 GO:0003924 ... P01112 23630290
    94968 2lwr:A (-1.00) BS01 ZN 2.3.2.31 N/A Q7KTX7 23770917
    94969 2lwr:A (-1.00) BS02 ZN 2.3.2.31 N/A Q7KTX7 23770917
    94970 2lww:A (-1.00) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 24019758
    94971 2lww:A (-1.00) BS02 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 24019758
    94972 2lww:A (-1.00) BS03 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 24019758
    94973 2lxd:A (-1.00) BS01 ZN ? N/A P25801
    P70662
    22936624
    94974 2lxd:A (-1.00) BS02 ZN ? N/A P25801
    P70662
    22936624
    94975 2lxh:C (-1.00) BS01 ZN 2.3.2.36 N/A Q9UKV5 23942235
    94976 2lxh:C (-1.00) BS02 ZN 2.3.2.36 N/A Q9UKV5 23942235
    94977 2lxp:A (-1.00) BS01 peptide 2.3.2.23 GO:0000209 ... P60604 23942235
    94978 2lxp:C (-1.00) BS01 ZN 2.3.2.36 N/A Q9UKV5 23942235
    94979 2lxp:C (-1.00) BS02 ZN 2.3.2.36 N/A Q9UKV5 23942235
    94980 2lxs:A (-1.00) BS01 peptide 2.3.1.-
    2.3.1.48
    GO:0003712 ... Q92793 23651431
    94981 2lxt:A (-1.00) BS01 peptide 2.3.1.-
    2.3.1.48
    GO:0003712 ... Q92793 23651431
    94982 2lxw:A (-1.00) BS01 ZN ? GO:0006915 ... Q6GPH4 N/A
    94983 2lxy:A (-1.00) BS01 HTS N/A N/A N/A 23373469
    94984 2ly0:A (-1.00) BS01 A2Y ? GO:0015078 ... Q6XT21 23302696
    94985 2lyb:A (-1.00) BS01 8SP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0005198 ... P12497 23401539
    94986 2lyo:A (1.93) BS01 CCN 3.2.1.17 GO:0003796 ... P00698 9659395
    94987 2lze:A (-1.00) BS01 ZN N/A N/A N/A 23222886
    94988 2lze:A (-1.00) BS02 ZN N/A N/A N/A 23222886
    94989 2lzg:A (-1.00) BS01 13Q 2.3.2.27 GO:0005634 ... Q00987 22991965 BindingDB: IC50=34nM
    94990 2lzt:A (1.97) BS01 NO3 3.2.1.17 GO:0003796 ... P00698 2302327
    94991 2lzt:A (1.97) BS02 NO3 3.2.1.17 GO:0003796 ... P00698 2302327
    94992 2lzt:A (1.97) BS03 NO3 3.2.1.17 GO:0003796 ... P00698 2302327
    94993 2lzu:A (-1.00) BS01 ZN ? N/A Q9BT23 N/A
    94994 2lzu:A (-1.00) BS02 ZN ? N/A Q9BT23 N/A
    94995 2lzz:A (-1.00) BS01 HEM N/A GO:0009055 ... N/A 23313804
    94996 2lzz:A (-1.00) BS02 HEM N/A GO:0009055 ... N/A 23313804
    94997 2lzz:A (-1.00) BS03 HEM N/A GO:0009055 ... N/A 23313804
    94998 2m04:A (-1.00) BS01 peptide ? GO:0042981 ... Q07817 23340338
    94999 2m0d:A (-1.00) BS01 ZN ? N/A Q13105 N/A
    95000 2m0j:A (-1.00) BS01 peptide ? GO:0000922 ... P0DP23 22877078

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).