SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    95001 2m0j:A (-1.00) BS02 CA ? GO:0000922 ... P0DP23 22877078
    95002 2m0j:A (-1.00) BS03 CA ? GO:0000922 ... P0DP23 22877078
    95003 2m0j:A (-1.00) BS04 CA ? GO:0000922 ... P0DP23 22877078
    95004 2m0j:A (-1.00) BS05 CA ? GO:0000922 ... P0DP23 22877078
    95005 2m0k:A (-1.00) BS01 peptide ? GO:0000922 ... P0DP23 22877078
    95006 2m0k:A (-1.00) BS02 CA ? GO:0000922 ... P0DP23 22877078
    95007 2m0k:A (-1.00) BS03 CA ? GO:0000922 ... P0DP23 22877078
    95008 2m0k:A (-1.00) BS04 CA ? GO:0000922 ... P0DP23 22877078
    95009 2m0k:A (-1.00) BS05 CA ? GO:0000922 ... P0DP23 22877078
    95010 2m0o:A (-1.00) BS01 peptide ? N/A O43189 23273982
    95011 2m0p:A (-1.00) BS01 CA ? N/A P98164 23275343
    95012 2m0u:A (-1.00) BS01 peptide ? N/A O14745 23583913
    95013 2m0v:A (-1.00) BS01 peptide ? N/A O14745 23583913
    95014 2m0z:A (-1.00) BS01 33B 3.1.3.48 N/A Q12923 23818626
    95015 2m10:A (-1.00) BS01 33B 3.1.3.48 N/A Q12923 23818626
    95016 2m13:A (-1.00) BS01 ZN ? GO:0003730 ... Q9BZB8 23500490
    95017 2m13:A (-1.00) BS02 ZN ? GO:0003730 ... Q9BZB8 23500490
    95018 2m14:A (-1.00) BS01 peptide ? N/A P32776 23295669
    95019 2m1d:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 23404086
    95020 2m1e:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 23404086
    95021 2m1r:A (-1.00) BS01 ZN ? N/A Q9UNL4 20705953
    95022 2m1r:A (-1.00) BS02 ZN ? N/A Q9UNL4 20705953
    95023 2m1s:A (-1.00) BS01 ZN ? GO:0003723 ... O73557 20212144
    95024 2m1s:A (-1.00) BS02 ZN ? GO:0003723 ... O73557 20212144
    95025 2m28:A (-1.00) BS01 CA ? GO:0005509 ... Q8VHC5 N/A
    95026 2m28:A (-1.00) BS02 CA ? GO:0005509 ... Q8VHC5 N/A
    95027 2m29:A (-1.00) BS01 CA ? GO:0005509 ... Q8VHC5 N/A
    95028 2m2m:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 23447530
    95029 2m2n:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 23447530
    95030 2m2o:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 23447530
    95031 2m2p:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 23447530
    95032 2m2u:A (-1.00) BS01 DGT 2.7.7.7 GO:0003677 ... P42494 24617852
    95033 2m2u:A (-1.00) BS02 MG 2.7.7.7 GO:0003677 ... P42494 24617852
    95034 2m2u:A (-1.00) BS03 MG 2.7.7.7 GO:0003677 ... P42494 24617852
    95035 2m2w:A (-1.00) BS01 dna 2.7.7.7 GO:0003677 ... P42494 24617852
    95036 2m2w:A (-1.00) BS02 DGT 2.7.7.7 GO:0003677 ... P42494 24617852
    95037 2m2w:A (-1.00) BS03 MG 2.7.7.7 GO:0003677 ... P42494 24617852
    95038 2m2w:A (-1.00) BS04 MG 2.7.7.7 GO:0003677 ... P42494 24617852
    95039 2m30:A (-1.00) BS01 ZN ? GO:0003700 ... O85142 23609042
    95040 2m30:A (-1.00) BS02 ZN ? GO:0003700 ... O85142 23609042
    95041 2m30:B (-1.00) BS01 ZN ? GO:0003700 ... O85142 23609042
    95042 2m30:B (-1.00) BS02 ZN ? GO:0003700 ... O85142 23609042
    95043 2m32:A (-1.00) BS01 peptide ? N/A P56199 24187131
    95044 2m32:A (-1.00) BS02 peptide ? N/A P56199 24187131
    95045 2m32:A (-1.00) BS03 MG ? N/A P56199 24187131
    95046 2m33:A (-1.00) BS01 HEM ? GO:0005783 ... P00169 N/A
    95047 2m3g:A (-1.00) BS01 RET ? GO:0005216 ... A0ACD6B968 24013819
    95048 2m3g:B (-1.00) BS01 RET ? GO:0005216 ... A0ACD6B968 24013819
    95049 2m3g:C (-1.00) BS01 RET ? GO:0005216 ... A0ACD6B968 24013819
    95050 2m3h:A (-1.00) BS01 ZN ? GO:0048188 ... Q9BTC0 23579637
    95051 2m3h:A (-1.00) BS02 ZN ? GO:0048188 ... Q9BTC0 23579637
    95052 2m3l:A (-1.00) BS01 ZN ? N/A P26554 23638119
    95053 2m3m:A (-1.00) BS01 peptide ? N/A Q12959 23638119
    95054 2m3o:W (-1.00) BS01 peptide 2.3.2.26 N/A P46934 23665454
    95055 2m3s:A (-1.00) BS01 CA ? GO:0005509 ... P62149 23630096
    95056 2m3s:A (-1.00) BS02 CA ? GO:0005509 ... P62149 23630096
    95057 2m3s:A (-1.00) BS03 CA ? GO:0005509 ... P62149 23630096
    95058 2m3s:A (-1.00) BS04 CA ? GO:0005509 ... P62149 23630096
    95059 2m3z:A (-1.00) BS01 ZN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 23485336
    95060 2m3z:A (-1.00) BS02 ZN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 23485336
    95061 2m3z:A (-1.00) BS03 1HF 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 23485336
    95062 2m3z:A (-1.00) BS04 1HF 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 23485336
    95063 2m41:B (-1.00) BS01 peptide ? GO:0003723 ... P54253 24155902
    95064 2m48:A (-1.00) BS01 ZN 2.3.2.31 GO:0004842 ... Q7KTX7 23770917
    95065 2m48:A (-1.00) BS02 ZN 2.3.2.31 GO:0004842 ... Q7KTX7 23770917
    95066 2m48:A (-1.00) BS03 ZN 2.3.2.31 GO:0004842 ... Q7KTX7 23770917
    95067 2m48:A (-1.00) BS04 ZN 2.3.2.31 GO:0004842 ... Q7KTX7 23770917
    95068 2m55:A (-1.00) BS01 peptide ? GO:0000922 ... P0DP23 23607618
    95069 2m55:A (-1.00) BS02 CA ? GO:0000922 ... P0DP23 23607618
    95070 2m55:A (-1.00) BS03 CA ? GO:0000922 ... P0DP23 23607618
    95071 2m55:A (-1.00) BS04 CA ? GO:0000922 ... P0DP23 23607618
    95072 2m55:A (-1.00) BS05 CA ? GO:0000922 ... P0DP23 23607618
    95073 2m56:A (-1.00) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 23856620
    95074 2m56:B (-1.00) BS01 FES ? GO:0005515 ... P00259 23856620
    95075 2m5b:A (-1.00) BS01 peptide ? GO:0042981 ... Q16611 23604079
    95076 2m5c:A (-1.00) BS01 ZN 3.5.2.6 GO:0008270 ... P04190 24059435
    95077 2m5c:A (-1.00) BS02 ZN 3.5.2.6 GO:0008270 ... P04190 24059435
    95078 2m5d:A (-1.00) BS01 ZN 3.5.2.6 GO:0008270 ... P04190 24059435
    95079 2m5d:A (-1.00) BS02 ZN 3.5.2.6 GO:0008270 ... P04190 24059435
    95080 2m5d:A (-1.00) BS03 RTD 3.5.2.6 GO:0008270 ... P04190 24059435
    95081 2m5e:A (-1.00) BS01 peptide ? GO:0005509 ... P07463 28343066
    95082 2m5e:A (-1.00) BS02 CA ? GO:0005509 ... P07463 28343066
    95083 2m5e:A (-1.00) BS03 CA ? GO:0005509 ... P07463 28343066
    95084 2m5t:A (-1.00) BS01 ZN 3.4.22.29
    3.6.1.15
    GO:0006508 ... I2CMJ2 24937088
    95085 2m65:A (-1.00) BS01 ZN 3.5.4.38 GO:0000932 ... P31941 23695684
    95086 2m6m:A (-1.00) BS01 ZN 2.3.2.27 GO:0008270 ... P40318 N/A
    95087 2m6m:A (-1.00) BS02 ZN 2.3.2.27 GO:0008270 ... P40318 N/A
    95088 2m6n:A (-1.00) BS01 ZN ? GO:0007088 ... Q9UKT4 23708605
    95089 2m6s:A (-1.00) BS01 FMN ? GO:0010181 ... P65367 23749454
    95090 2m6z:A (-1.00) BS01 HEM ? GO:0004601 ... P69905 23901897
    95091 2m6z:B (-1.00) BS01 HEM ? GO:0004601 ... P68871 23901897
    95092 2m6z:C (-1.00) BS01 HEM ? GO:0004601 ... P69905 23901897
    95093 2m6z:D (-1.00) BS01 HEM ? GO:0004601 ... P68871 23901897
    95094 2m7a:A (-1.00) BS01 ZN N/A N/A N/A 23672713
    95095 2m7b:A (-1.00) BS01 ZN ? N/A Q88G17 23672713
    95096 2m7m:A (-1.00) BS01 CA ? GO:0005509 ... P38505 23782698
    95097 2m7m:A (-1.00) BS02 CA ? GO:0005509 ... P38505 23782698
    95098 2m7n:A (-1.00) BS01 CA ? GO:0001891 ... P38505 23782698
    95099 2m7n:A (-1.00) BS02 CA ? GO:0001891 ... P38505 23782698
    95100 2m7p:A (-1.00) BS01 CA ? N/A P01130
    Q9HBX9
    23926099
    95101 2m7q:A (-1.00) BS01 ZN ? N/A Q86VP1 24239949
    95102 2m7q:A (-1.00) BS02 ZN ? N/A Q86VP1 24239949
    95103 2m7u:A (-1.00) BS01 VRB ? N/A Q8DLC7 N/A
    95104 2m7v:A (-1.00) BS01 PVN ? N/A Q8DLC7 N/A
    95105 2m7y:A (-1.00) BS01 ZN 2.7.7.48
    3.4.22.28
    3.6.4.13
    N/A P12296 N/A
    95106 2m85:A (-1.00) BS01 ZN 2.3.2.27
    3.6.4.-
    N/A Q149N8 23907177
    95107 2m85:A (-1.00) BS02 ZN 2.3.2.27
    3.6.4.-
    N/A Q149N8 23907177
    95108 2m8d:B (-1.00) BS01 rna ? GO:0003676 ... Q07955 23836656
    95109 2m8s:A (-1.00) BS01 peptide ? GO:0051087 ... Q60739 24628338
    95110 2m96:A (-1.00) BS01 CA ? N/A Q8WXD0 N/A
    95111 2m98:A (-1.00) BS01 CA ? GO:0000160 ... Q930Y6 24364624
    95112 2m98:A (-1.00) BS02 BEF ? GO:0000160 ... Q930Y6 24364624
    95113 2m9a:A (-1.00) BS01 ZN 2.3.2.27 N/A Q96JP5 N/A
    95114 2m9a:A (-1.00) BS02 ZN 2.3.2.27 N/A Q96JP5 N/A
    95115 2m9a:A (-1.00) BS03 ZN 2.3.2.27 N/A Q96JP5 N/A
    95116 2m9p:A (-1.00) BS01 peptide 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... P14337 N/A
    95117 2m9q:A (-1.00) BS01 peptide 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... P14337 N/A
    95118 2m9r:A (-1.00) BS01 23Y ? GO:0016020 ... P05067 23830862
    95119 2m9s:A (-1.00) BS01 23Y ? GO:0016020 ... P05067 23830862
    95120 2m9w:A (-1.00) BS01 ZN ? GO:0003700 ... P43694 N/A
    95121 2m9y:A (-1.00) BS01 ZN 2.3.2.31 GO:0004842 ... Q9Y4X5 24058416
    95122 2m9y:A (-1.00) BS02 ZN 2.3.2.31 GO:0004842 ... Q9Y4X5 24058416
    95123 2ma5:A (-1.00) BS01 ZN 1.14.11.67 GO:0010468 ... Q9UGL1 N/A
    95124 2ma5:A (-1.00) BS02 ZN 1.14.11.67 GO:0010468 ... Q9UGL1 N/A
    95125 2ma6:A (-1.00) BS01 ZN 2.3.2.27 GO:0004842 ... Q5XPI4 N/A
    95126 2ma6:A (-1.00) BS02 ZN 2.3.2.27 GO:0004842 ... Q5XPI4 N/A
    95127 2ma7:A (-1.00) BS01 ZN ? N/A Q9H2S9 N/A
    95128 2mak:A (-1.00) BS01 peptide ? GO:0005246 ... Q13586 24351972
    95129 2mak:A (-1.00) BS02 peptide ? GO:0005246 ... Q13586 24351972
    95130 2mak:C (-1.00) BS01 peptide ? GO:0005246 ... Q13586 24351972
    95131 2mak:C (-1.00) BS02 peptide ? GO:0005246 ... Q13586 24351972
    95132 2man:A (1.9) BS01 MAN 3.2.1.78 GO:0000272 ... Q9ZF13 9817845
    95133 2man:A (1.9) BS02 BMA 3.2.1.78 GO:0000272 ... Q9ZF13 9817845
    95134 2map:A (-1.00) BS01 dna N/A GO:0003677 ... N/A 24531660
    95135 2mas:A (2.3) BS01 CA 3.2.2.2
    3.2.2.3
    GO:0005829 ... Q27546 9572842
    95136 2mas:A (2.3) BS02 PIR 3.2.2.2
    3.2.2.3
    GO:0005829 ... Q27546 9572842 MOAD: Kd=30nM
    95137 2mas:B (2.3) BS01 CA 3.2.2.2
    3.2.2.3
    GO:0005829 ... Q27546 9572842
    95138 2mas:B (2.3) BS02 PIR 3.2.2.2
    3.2.2.3
    GO:0005829 ... Q27546 9572842 MOAD: Kd=30nM
    95139 2mas:C (2.3) BS01 CA 3.2.2.2
    3.2.2.3
    GO:0005829 ... Q27546 9572842
    95140 2mas:C (2.3) BS02 PIR 3.2.2.2
    3.2.2.3
    GO:0005829 ... Q27546 9572842 MOAD: Kd=30nM
    95141 2mas:D (2.3) BS01 CA 3.2.2.2
    3.2.2.3
    GO:0005829 ... Q27546 9572842
    95142 2mas:D (2.3) BS02 PIR 3.2.2.2
    3.2.2.3
    GO:0005829 ... Q27546 9572842 MOAD: Kd=30nM
    95143 2mat:A (1.9) BS01 CO 3.4.11.18 GO:0004239 ... P0AE18 10387007
    95144 2mat:A (1.9) BS02 CO 3.4.11.18 GO:0004239 ... P0AE18 10387007
    95145 2mb0:B (-1.00) BS01 rna ? GO:0003676 ... P38159 24692659
    95146 2mb5:A (1.8) BS01 ND4 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    95147 2mb5:A (1.8) BS02 ND4 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    95148 2mb5:A (1.8) BS03 ND4 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    95149 2mb5:A (1.8) BS04 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    95150 2mbh:A (-1.00) BS01 peptide ? N/A P62987 24139988
    95151 2mbr:A (1.8) BS01 FAD 1.3.1.98 GO:0005737 ... P08373 9020778
    95152 2mbr:A (1.8) BS02 EPU 1.3.1.98 GO:0005737 ... P08373 9020778
    95153 2mbv:A (-1.00) BS01 ZN ? N/A P61969
    Q9Z1T5
    N/A
    95154 2mbv:A (-1.00) BS02 ZN ? N/A P61969
    Q9Z1T5
    N/A
    95155 2mbw:A (1.5) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 8810310
    95156 2mbx:A (-1.00) BS01 CA ? GO:0005509 ... Q90YK9 25116395
    95157 2mbx:A (-1.00) BS02 CA ? GO:0005509 ... Q90YK9 25116395
    95158 2mbz:A (-1.00) BS01 peptide ? N/A P0A4T9 25489067
    95159 2mc0:A (-1.00) BS01 peptide ? N/A P0A4T9 25489067
    95160 2mc0:A (-1.00) BS02 NO1 ? N/A P0A4T9 25489067
    95161 2mc1:A (-1.00) BS01 peptide ? N/A P15498 23955592
    95162 2mc6:A (-1.00) BS01 peptide ? N/A Q8LTJ5 24482445
    95163 2mcp:H (3.1) BS01 PC ? GO:0003823 ... P01789 N/A
    95164 2md7:B (-1.00) BS01 ZN ? N/A Q13342 24267382
    95165 2md7:B (-1.00) BS02 ZN ? N/A Q13342 24267382
    95166 2md8:C (-1.00) BS01 ZN ? N/A Q13342 24267382
    95167 2md8:C (-1.00) BS02 ZN ? N/A Q13342 24267382
    95168 2mdg:A (-1.00) BS01 ZN ? N/A Q2M1K9 N/A
    95169 2mdg:A (-1.00) BS02 ZN ? N/A Q2M1K9 N/A
    95170 2me6:A (-1.00) BS01 dna ? GO:0000981 ... Q14549 N/A
    95171 2me6:A (-1.00) BS02 dna ? GO:0000981 ... Q14549 N/A
    95172 2mej:B (-1.00) BS01 ZN ? GO:0000976 ... P04637 24814347
    95173 2mes:A (-1.00) BS01 peptide N/A GO:0005102 ... P0DP33 24705785
    95174 2mes:A (-1.00) BS02 CA N/A GO:0005102 ... P0DP33 24705785
    95175 2mes:A (-1.00) BS03 CA N/A GO:0005102 ... P0DP33 24705785
    95176 2mes:A (-1.00) BS04 CA N/A GO:0005102 ... P0DP33 24705785
    95177 2mes:A (-1.00) BS05 CA N/A GO:0005102 ... P0DP33 24705785
    95178 2mev:2 (3.0) BS01 PO4 2.7.7.48
    3.4.22.28
    3.6.4.13
    GO:0005198 ... P12296 2156078
    95179 2mf0:A (-1.00) BS01 rna ? GO:0003723 ... P0DPC3 24828038
    95180 2mf0:B (-1.00) BS01 rna ? GO:0003723 ... P0DPC3 24828038
    95181 2mf0:C (-1.00) BS01 rna ? GO:0003723 ... P0DPC3 24828038
    95182 2mf0:D (-1.00) BS01 rna ? GO:0003723 ... P0DPC3 24828038
    95183 2mf0:E (-1.00) BS01 rna ? GO:0003723 ... P0DPC3 24828038
    95184 2mf0:F (-1.00) BS01 rna ? GO:0003723 ... P0DPC3 24828038
    95185 2mf1:A (-1.00) BS01 rna ? GO:0003723 ... P0DPC3 24828038
    95186 2mf1:B (-1.00) BS01 rna ? GO:0003723 ... P0DPC3 24828038
    95187 2mf1:C (-1.00) BS01 rna ? GO:0003723 ... P0DPC3 24828038
    95188 2mf1:D (-1.00) BS01 rna ? GO:0003723 ... P0DPC3 24828038
    95189 2mf1:E (-1.00) BS01 rna ? GO:0003723 ... P0DPC3 24828038
    95190 2mf1:F (-1.00) BS01 rna ? GO:0003723 ... P0DPC3 24828038
    95191 2mf8:A (-1.00) BS01 dna ? GO:0005634 ... Q8CFC2 24097990
    95192 2mf8:A (-1.00) BS02 dna ? GO:0005634 ... Q8CFC2 24097990
    95193 2mf8:A (-1.00) BS03 ZN ? GO:0005634 ... Q8CFC2 24097990
    95194 2mf8:A (-1.00) BS04 ZN ? GO:0005634 ... Q8CFC2 24097990
    95195 2mfc:A (-1.00) BS01 rna ? GO:0003723 ... P0DPC3 24561806
    95196 2mfc:A (-1.00) BS02 rna ? GO:0003723 ... P0DPC3 24561806
    95197 2mfc:C (-1.00) BS01 rna ? GO:0003723 ... P0DPC3 24561806
    95198 2mfc:C (-1.00) BS02 rna ? GO:0003723 ... P0DPC3 24561806
    95199 2mfe:A (-1.00) BS01 rna ? GO:0003723 ... P0DPC3 24561806
    95200 2mfe:A (-1.00) BS02 rna ? GO:0003723 ... P0DPC3 24561806

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).