SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    952201 9d0h:1G (2.5) BS02 rna N/A GO:0000049 ... Q5SHQ0 40787583
    952202 9d0h:1G (2.5) BS03 rna N/A GO:0000049 ... Q5SHQ0 40787583
    952203 9d0h:1G (2.5) BS04 MG N/A GO:0000049 ... Q5SHQ0 40787583
    952204 9d0h:1G (2.5) BS05 MG N/A GO:0000049 ... Q5SHQ0 40787583
    952205 9d0h:1H (2.5) BS01 rna N/A GO:0002181 ... P0DOY8 40787583
    952206 9d0h:1I (2.5) BS01 rna N/A GO:0003735 ... Q5SLQ1 40787583
    952207 9d0h:1I (2.5) BS02 MG N/A GO:0003735 ... Q5SLQ1 40787583
    952208 9d0h:1N (2.5) BS01 rna N/A GO:0003729 ... P60488 40787583
    952209 9d0h:1N (2.5) BS02 MG N/A GO:0003729 ... P60488 40787583
    952210 9d0h:1N (2.5) BS03 MG N/A GO:0003729 ... P60488 40787583
    952211 9d0h:1N (2.5) BS04 MG N/A GO:0003729 ... P60488 40787583
    952212 9d0h:1O (2.5) BS01 rna N/A GO:0003735 ... Q5SHP8 40787583
    952213 9d0h:1O (2.5) BS02 rna N/A GO:0003735 ... Q5SHP8 40787583
    952214 9d0h:1O (2.5) BS03 MG N/A GO:0003735 ... Q5SHP8 40787583
    952215 9d0h:1O (2.5) BS04 MG N/A GO:0003735 ... Q5SHP8 40787583
    952216 9d0h:1P (2.5) BS01 rna N/A GO:0003735 ... Q5SHQ7 40787583
    952217 9d0h:1P (2.5) BS02 MG N/A GO:0003735 ... Q5SHQ7 40787583
    952218 9d0h:1P (2.5) BS03 MG N/A GO:0003735 ... Q5SHQ7 40787583
    952219 9d0h:1P (2.5) BS04 MG N/A GO:0003735 ... Q5SHQ7 40787583
    952220 9d0h:1P (2.5) BS05 MG N/A GO:0003735 ... Q5SHQ7 40787583
    952221 9d0h:1P (2.5) BS06 MG N/A GO:0003735 ... Q5SHQ7 40787583
    952222 9d0h:1Q (2.5) BS01 rna N/A GO:0003735 ... P60489 40787583
    952223 9d0h:1Q (2.5) BS02 rna N/A GO:0003735 ... P60489 40787583
    952224 9d0h:1Q (2.5) BS03 rna N/A GO:0003735 ... P60489 40787583
    952225 9d0h:1Q (2.5) BS04 MG N/A GO:0003735 ... P60489 40787583
    952226 9d0h:1Q (2.5) BS05 MG N/A GO:0003735 ... P60489 40787583
    952227 9d0h:1Q (2.5) BS06 MG N/A GO:0003735 ... P60489 40787583
    952228 9d0h:1Q (2.5) BS07 MG N/A GO:0003735 ... P60489 40787583
    952229 9d0h:1Q (2.5) BS08 MG N/A GO:0003735 ... P60489 40787583
    952230 9d0h:1R (2.5) BS01 rna N/A GO:0003735 ... Q9Z9H5 40787583
    952231 9d0h:1R (2.5) BS02 MG N/A GO:0003735 ... Q9Z9H5 40787583
    952232 9d0h:1R (2.5) BS03 MG N/A GO:0003735 ... Q9Z9H5 40787583
    952233 9d0h:1S (2.5) BS01 rna N/A GO:0003735 ... Q5SHQ4 40787583
    952234 9d0h:1S (2.5) BS02 rna N/A GO:0003735 ... Q5SHQ4 40787583
    952235 9d0h:1S (2.5) BS03 MG N/A GO:0003735 ... Q5SHQ4 40787583
    952236 9d0h:1S (2.5) BS04 MG N/A GO:0003735 ... Q5SHQ4 40787583
    952237 9d0h:1T (2.5) BS01 rna N/A GO:0003735 ... P60490 40787583
    952238 9d0h:1T (2.5) BS02 rna N/A GO:0003735 ... P60490 40787583
    952239 9d0h:1U (2.5) BS01 rna N/A GO:0000027 ... P60491 40787583
    952240 9d0h:1U (2.5) BS02 MG N/A GO:0000027 ... P60491 40787583
    952241 9d0h:1U (2.5) BS03 MG N/A GO:0000027 ... P60491 40787583
    952242 9d0h:1U (2.5) BS04 MG N/A GO:0000027 ... P60491 40787583
    952243 9d0h:1U (2.5) BS05 MG N/A GO:0000027 ... P60491 40787583
    952244 9d0h:1U (2.5) BS06 MG N/A GO:0000027 ... P60491 40787583
    952245 9d0h:1U (2.5) BS07 MG N/A GO:0000027 ... P60491 40787583
    952246 9d0h:1U (2.5) BS08 MG N/A GO:0000027 ... P60491 40787583
    952247 9d0h:1V (2.5) BS01 rna N/A GO:0003723 ... P60492 40787583
    952248 9d0h:1V (2.5) BS02 MG N/A GO:0003723 ... P60492 40787583
    952249 9d0h:1V (2.5) BS03 MG N/A GO:0003723 ... P60492 40787583
    952250 9d0h:1V (2.5) BS04 MG N/A GO:0003723 ... P60492 40787583
    952251 9d0h:1V (2.5) BS05 MG N/A GO:0003723 ... P60492 40787583
    952252 9d0h:1V (2.5) BS06 MG N/A GO:0003723 ... P60492 40787583
    952253 9d0h:1W (2.5) BS01 rna N/A GO:0003735 ... Q5SHP3 40787583
    952254 9d0h:1W (2.5) BS02 MG N/A GO:0003735 ... Q5SHP3 40787583
    952255 9d0h:1W (2.5) BS03 MG N/A GO:0003735 ... Q5SHP3 40787583
    952256 9d0h:1W (2.5) BS04 MG N/A GO:0003735 ... Q5SHP3 40787583
    952257 9d0h:1W (2.5) BS05 MG N/A GO:0003735 ... Q5SHP3 40787583
    952258 9d0h:1W (2.5) BS06 MG N/A GO:0003735 ... Q5SHP3 40787583
    952259 9d0h:1X (2.5) BS01 rna N/A GO:0003735 ... Q5SHP0 40787583
    952260 9d0h:1X (2.5) BS02 MG N/A GO:0003735 ... Q5SHP0 40787583
    952261 9d0h:1X (2.5) BS03 MG N/A GO:0003735 ... Q5SHP0 40787583
    952262 9d0h:1X (2.5) BS04 MG N/A GO:0003735 ... Q5SHP0 40787583
    952263 9d0h:1X (2.5) BS05 MG N/A GO:0003735 ... Q5SHP0 40787583
    952264 9d0h:1X (2.5) BS06 MG N/A GO:0003735 ... Q5SHP0 40787583
    952265 9d0h:1Y (2.5) BS01 rna N/A GO:0003723 ... Q5SHP9 40787583
    952266 9d0h:1Y (2.5) BS02 MG N/A GO:0003723 ... Q5SHP9 40787583
    952267 9d0h:1Y (2.5) BS03 ZN N/A GO:0003723 ... Q5SHP9 40787583
    952268 9d0h:1Z (2.5) BS01 rna N/A GO:0003723 ... Q5SHZ1 40787583
    952269 9d0h:1Z (2.5) BS02 rna N/A GO:0003723 ... Q5SHZ1 40787583
    952270 9d0h:1b (2.5) BS01 rna N/A GO:0003735 ... P80371 40787583
    952271 9d0h:1c (2.5) BS01 rna N/A GO:0003676 ... P80372 40787583
    952272 9d0h:1d (2.5) BS01 rna N/A GO:0003723 ... P80373 40787583
    952273 9d0h:1d (2.5) BS02 SF4 N/A GO:0003723 ... P80373 40787583
    952274 9d0h:1e (2.5) BS01 rna N/A GO:0003723 ... Q5SHQ5 40787583
    952275 9d0h:1e (2.5) BS02 MG N/A GO:0003723 ... Q5SHQ5 40787583
    952276 9d0h:1f (2.5) BS01 rna N/A GO:0003735 ... Q5SLP8 40787583
    952277 9d0h:1f (2.5) BS02 MG N/A GO:0003735 ... Q5SLP8 40787583
    952278 9d0h:1g (2.5) BS01 rna N/A GO:0000049 ... P17291 40787583
    952279 9d0h:1g (2.5) BS02 rna N/A GO:0000049 ... P17291 40787583
    952280 9d0h:1h (2.5) BS01 rna N/A GO:0003735 ... P0DOY9 40787583
    952281 9d0h:1i (2.5) BS01 rna N/A GO:0003723 ... P80374 40787583
    952282 9d0h:1j (2.5) BS01 rna N/A GO:0000049 ... Q5SHN7 40787583
    952283 9d0h:1k (2.5) BS01 rna N/A GO:0003735 ... P80376 40787583
    952284 9d0h:1k (2.5) BS02 MG N/A GO:0003735 ... P80376 40787583
    952285 9d0h:1l (2.5) BS01 rna N/A GO:0000049 ... Q5SHN3 40787583
    952286 9d0h:1l (2.5) BS02 MG N/A GO:0000049 ... Q5SHN3 40787583
    952287 9d0h:1m (2.5) BS01 rna N/A GO:0000049 ... P80377 40787583
    952288 9d0h:1m (2.5) BS02 rna N/A GO:0000049 ... P80377 40787583
    952289 9d0h:1m (2.5) BS03 rna N/A GO:0000049 ... P80377 40787583
    952290 9d0h:1m (2.5) BS04 MG N/A GO:0000049 ... P80377 40787583
    952291 9d0h:1n (2.5) BS01 rna N/A GO:0003735 ... P0DOY6 40787583
    952292 9d0h:1n (2.5) BS02 ZN N/A GO:0003735 ... P0DOY6 40787583
    952293 9d0h:1o (2.5) BS01 rna N/A GO:0003735 ... Q5SJ76 40787583
    952294 9d0h:1o (2.5) BS02 rna N/A GO:0003735 ... Q5SJ76 40787583
    952295 9d0h:1p (2.5) BS01 rna N/A GO:0003735 ... Q5SJH3 40787583
    952296 9d0h:1q (2.5) BS01 rna N/A GO:0003735 ... P0DOY7 40787583
    952297 9d0h:1r (2.5) BS01 rna N/A GO:0003735 ... Q5SLQ0 40787583
    952298 9d0h:1s (2.5) BS01 rna N/A GO:0000028 ... Q5SHP2 40787583
    952299 9d0h:1t (2.5) BS01 rna N/A GO:0003723 ... P80380 40787583
    952300 9d0h:20 (2.5) BS01 rna N/A GO:0003735 ... P60493 40787583
    952301 9d0h:20 (2.5) BS02 rna N/A GO:0003735 ... P60493 40787583
    952302 9d0h:20 (2.5) BS03 rna N/A GO:0003735 ... P60493 40787583
    952303 9d0h:21 (2.5) BS01 rna N/A GO:0003735 ... P60494 40787583
    952304 9d0h:21 (2.5) BS02 MG N/A GO:0003735 ... P60494 40787583
    952305 9d0h:22 (2.5) BS01 rna N/A GO:0003735 ... Q5SHP6 40787583
    952306 9d0h:23 (2.5) BS01 rna N/A GO:0003735 ... Q5SHQ6 40787583
    952307 9d0h:23 (2.5) BS02 rna N/A GO:0003735 ... Q5SHQ6 40787583
    952308 9d0h:23 (2.5) BS03 MG N/A GO:0003735 ... Q5SHQ6 40787583
    952309 9d0h:24 (2.5) BS01 rna N/A GO:0003735 ... Q5SJE1 40787583
    952310 9d0h:24 (2.5) BS02 ZN N/A GO:0003735 ... Q5SJE1 40787583
    952311 9d0h:25 (2.5) BS01 rna N/A GO:0003735 ... P80339 40787583
    952312 9d0h:25 (2.5) BS02 MG N/A GO:0003735 ... P80339 40787583
    952313 9d0h:25 (2.5) BS03 MG N/A GO:0003735 ... P80339 40787583
    952314 9d0h:25 (2.5) BS04 ZN N/A GO:0003735 ... P80339 40787583
    952315 9d0h:26 (2.5) BS01 rna N/A GO:0003735 ... P35871 40787583
    952316 9d0h:26 (2.5) BS02 ZN N/A GO:0003735 ... P35871 40787583
    952317 9d0h:27 (2.5) BS01 rna N/A GO:0003735 ... P80340 40787583
    952318 9d0h:27 (2.5) BS02 MG N/A GO:0003735 ... P80340 40787583
    952319 9d0h:28 (2.5) BS01 rna N/A GO:0003735 ... Q5SKU1 40787583
    952320 9d0h:29 (2.5) BS01 rna N/A GO:0003735 ... Q5SHR2 40787583
    952321 9d0h:29 (2.5) BS02 MG N/A GO:0003735 ... Q5SHR2 40787583
    952322 9d0h:29 (2.5) BS03 ZN N/A GO:0003735 ... Q5SHR2 40787583
    952323 9d0h:2D (2.5) BS01 rna N/A GO:0002181 ... P60405 40787583
    952324 9d0h:2D (2.5) BS02 rna N/A GO:0002181 ... P60405 40787583
    952325 9d0h:2D (2.5) BS03 MG N/A GO:0002181 ... P60405 40787583
    952326 9d0h:2D (2.5) BS04 MG N/A GO:0002181 ... P60405 40787583
    952327 9d0h:2D (2.5) BS05 MG N/A GO:0002181 ... P60405 40787583
    952328 9d0h:2D (2.5) BS06 MG N/A GO:0002181 ... P60405 40787583
    952329 9d0h:2E (2.5) BS01 rna N/A GO:0003735 ... Q5SHN8 40787583
    952330 9d0h:2F (2.5) BS01 rna N/A GO:0003735 ... Q5SHN9 40787583
    952331 9d0h:2F (2.5) BS02 MG N/A GO:0003735 ... Q5SHN9 40787583
    952332 9d0h:2F (2.5) BS03 MG N/A GO:0003735 ... Q5SHN9 40787583
    952333 9d0h:2F (2.5) BS04 MG N/A GO:0003735 ... Q5SHN9 40787583
    952334 9d0h:2F (2.5) BS05 MG N/A GO:0003735 ... Q5SHN9 40787583
    952335 9d0h:2G (2.5) BS01 rna N/A GO:0000049 ... Q5SHQ0 40787583
    952336 9d0h:2G (2.5) BS02 rna N/A GO:0000049 ... Q5SHQ0 40787583
    952337 9d0h:2G (2.5) BS03 rna N/A GO:0000049 ... Q5SHQ0 40787583
    952338 9d0h:2G (2.5) BS04 MG N/A GO:0000049 ... Q5SHQ0 40787583
    952339 9d0h:2H (2.5) BS01 rna N/A GO:0002181 ... P0DOY8 40787583
    952340 9d0h:2I (2.5) BS01 rna N/A GO:0003735 ... Q5SLQ1 40787583
    952341 9d0h:2N (2.5) BS01 rna N/A GO:0003729 ... P60488 40787583
    952342 9d0h:2O (2.5) BS01 rna N/A GO:0003735 ... Q5SHP8 40787583
    952343 9d0h:2O (2.5) BS02 rna N/A GO:0003735 ... Q5SHP8 40787583
    952344 9d0h:2P (2.5) BS01 rna N/A GO:0003735 ... Q5SHQ7 40787583
    952345 9d0h:2Q (2.5) BS01 rna N/A GO:0003735 ... P60489 40787583
    952346 9d0h:2Q (2.5) BS02 rna N/A GO:0003735 ... P60489 40787583
    952347 9d0h:2Q (2.5) BS03 rna N/A GO:0003735 ... P60489 40787583
    952348 9d0h:2Q (2.5) BS04 MG N/A GO:0003735 ... P60489 40787583
    952349 9d0h:2Q (2.5) BS05 MG N/A GO:0003735 ... P60489 40787583
    952350 9d0h:2Q (2.5) BS06 MG N/A GO:0003735 ... P60489 40787583
    952351 9d0h:2R (2.5) BS01 rna N/A GO:0003735 ... Q9Z9H5 40787583
    952352 9d0h:2S (2.5) BS01 rna N/A GO:0003735 ... Q5SHQ4 40787583
    952353 9d0h:2S (2.5) BS02 rna N/A GO:0003735 ... Q5SHQ4 40787583
    952354 9d0h:2T (2.5) BS01 rna N/A GO:0003735 ... P60490 40787583
    952355 9d0h:2T (2.5) BS02 rna N/A GO:0003735 ... P60490 40787583
    952356 9d0h:2U (2.5) BS01 rna N/A GO:0000027 ... P60491 40787583
    952357 9d0h:2U (2.5) BS02 MG N/A GO:0000027 ... P60491 40787583
    952358 9d0h:2V (2.5) BS01 rna N/A GO:0003723 ... P60492 40787583
    952359 9d0h:2V (2.5) BS02 MG N/A GO:0003723 ... P60492 40787583
    952360 9d0h:2W (2.5) BS01 rna N/A GO:0003735 ... Q5SHP3 40787583
    952361 9d0h:2W (2.5) BS02 MG N/A GO:0003735 ... Q5SHP3 40787583
    952362 9d0h:2W (2.5) BS03 MG N/A GO:0003735 ... Q5SHP3 40787583
    952363 9d0h:2W (2.5) BS04 MG N/A GO:0003735 ... Q5SHP3 40787583
    952364 9d0h:2X (2.5) BS01 rna N/A GO:0003735 ... Q5SHP0 40787583
    952365 9d0h:2X (2.5) BS02 MG N/A GO:0003735 ... Q5SHP0 40787583
    952366 9d0h:2Y (2.5) BS01 rna N/A GO:0003723 ... Q5SHP9 40787583
    952367 9d0h:2Y (2.5) BS02 ZN N/A GO:0003723 ... Q5SHP9 40787583
    952368 9d0h:2Z (2.5) BS01 rna N/A GO:0003723 ... Q5SHZ1 40787583
    952369 9d0h:2Z (2.5) BS02 rna N/A GO:0003723 ... Q5SHZ1 40787583
    952370 9d0h:2Z (2.5) BS03 MG N/A GO:0003723 ... Q5SHZ1 40787583
    952371 9d0h:2b (2.5) BS01 rna N/A GO:0003735 ... P80371 40787583
    952372 9d0h:2c (2.5) BS01 rna N/A GO:0003676 ... P80372 40787583
    952373 9d0h:2d (2.5) BS01 rna N/A GO:0003723 ... P80373 40787583
    952374 9d0h:2d (2.5) BS02 SF4 N/A GO:0003723 ... P80373 40787583
    952375 9d0h:2e (2.5) BS01 rna N/A GO:0003723 ... Q5SHQ5 40787583
    952376 9d0h:2e (2.5) BS02 MG N/A GO:0003723 ... Q5SHQ5 40787583
    952377 9d0h:2f (2.5) BS01 rna N/A GO:0003735 ... Q5SLP8 40787583
    952378 9d0h:2f (2.5) BS02 MG N/A GO:0003735 ... Q5SLP8 40787583
    952379 9d0h:2g (2.5) BS01 rna N/A GO:0000049 ... P17291 40787583
    952380 9d0h:2g (2.5) BS02 rna N/A GO:0000049 ... P17291 40787583
    952381 9d0h:2h (2.5) BS01 rna N/A GO:0003735 ... P0DOY9 40787583
    952382 9d0h:2i (2.5) BS01 rna N/A GO:0003723 ... P80374 40787583
    952383 9d0h:2i (2.5) BS02 rna N/A GO:0003723 ... P80374 40787583
    952384 9d0h:2j (2.5) BS01 rna N/A GO:0000049 ... Q5SHN7 40787583
    952385 9d0h:2k (2.5) BS01 rna N/A GO:0003735 ... P80376 40787583
    952386 9d0h:2k (2.5) BS02 MG N/A GO:0003735 ... P80376 40787583
    952387 9d0h:2l (2.5) BS01 rna N/A GO:0000049 ... Q5SHN3 40787583
    952388 9d0h:2l (2.5) BS02 MG N/A GO:0000049 ... Q5SHN3 40787583
    952389 9d0h:2l (2.5) BS03 MG N/A GO:0000049 ... Q5SHN3 40787583
    952390 9d0h:2l (2.5) BS04 MG N/A GO:0000049 ... Q5SHN3 40787583
    952391 9d0h:2m (2.5) BS01 rna N/A GO:0000049 ... P80377 40787583
    952392 9d0h:2m (2.5) BS02 rna N/A GO:0000049 ... P80377 40787583
    952393 9d0h:2n (2.5) BS01 rna N/A GO:0003735 ... P0DOY6 40787583
    952394 9d0h:2n (2.5) BS02 ZN N/A GO:0003735 ... P0DOY6 40787583
    952395 9d0h:2o (2.5) BS01 rna N/A GO:0003735 ... Q5SJ76 40787583
    952396 9d0h:2o (2.5) BS02 rna N/A GO:0003735 ... Q5SJ76 40787583
    952397 9d0h:2p (2.5) BS01 rna N/A GO:0003735 ... Q5SJH3 40787583
    952398 9d0h:2q (2.5) BS01 rna N/A GO:0003735 ... P0DOY7 40787583
    952399 9d0h:2q (2.5) BS02 MG N/A GO:0003735 ... P0DOY7 40787583
    952400 9d0h:2r (2.5) BS01 rna N/A GO:0003735 ... Q5SLQ0 40787583

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).