SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    952401 9d0h:2r (2.5) BS02 MG N/A GO:0003735 ... Q5SLQ0 40787583
    952402 9d0h:2s (2.5) BS01 rna N/A GO:0000028 ... Q5SHP2 40787583
    952403 9d0h:2t (2.5) BS01 rna N/A GO:0003723 ... P80380 40787583
    952404 9d0h:2t (2.5) BS02 MG N/A GO:0003723 ... P80380 40787583
    952405 9d0i:10 (2.45) BS01 rna N/A GO:0003735 ... P60493 40787583
    952406 9d0i:10 (2.45) BS02 rna N/A GO:0003735 ... P60493 40787583
    952407 9d0i:10 (2.45) BS03 rna N/A GO:0003735 ... P60493 40787583
    952408 9d0i:10 (2.45) BS04 MG N/A GO:0003735 ... P60493 40787583
    952409 9d0i:10 (2.45) BS05 MG N/A GO:0003735 ... P60493 40787583
    952410 9d0i:10 (2.45) BS06 MG N/A GO:0003735 ... P60493 40787583
    952411 9d0i:11 (2.45) BS01 rna N/A GO:0003735 ... P60494 40787583
    952412 9d0i:11 (2.45) BS02 rna N/A GO:0003735 ... P60494 40787583
    952413 9d0i:11 (2.45) BS03 MG N/A GO:0003735 ... P60494 40787583
    952414 9d0i:12 (2.45) BS01 rna N/A GO:0003735 ... Q5SHP6 40787583
    952415 9d0i:12 (2.45) BS02 MG N/A GO:0003735 ... Q5SHP6 40787583
    952416 9d0i:13 (2.45) BS01 rna N/A GO:0003735 ... Q5SHQ6 40787583
    952417 9d0i:13 (2.45) BS02 rna N/A GO:0003735 ... Q5SHQ6 40787583
    952418 9d0i:13 (2.45) BS03 MG N/A GO:0003735 ... Q5SHQ6 40787583
    952419 9d0i:13 (2.45) BS04 MG N/A GO:0003735 ... Q5SHQ6 40787583
    952420 9d0i:14 (2.45) BS01 rna N/A GO:0003735 ... Q5SJE1 40787583
    952421 9d0i:14 (2.45) BS02 ZN N/A GO:0003735 ... Q5SJE1 40787583
    952422 9d0i:15 (2.45) BS01 rna N/A GO:0003735 ... P80339 40787583
    952423 9d0i:15 (2.45) BS02 MG N/A GO:0003735 ... P80339 40787583
    952424 9d0i:15 (2.45) BS03 MG N/A GO:0003735 ... P80339 40787583
    952425 9d0i:15 (2.45) BS04 ZN N/A GO:0003735 ... P80339 40787583
    952426 9d0i:16 (2.45) BS01 rna N/A GO:0003735 ... P35871 40787583
    952427 9d0i:16 (2.45) BS02 MG N/A GO:0003735 ... P35871 40787583
    952428 9d0i:16 (2.45) BS03 MG N/A GO:0003735 ... P35871 40787583
    952429 9d0i:16 (2.45) BS04 ZN N/A GO:0003735 ... P35871 40787583
    952430 9d0i:17 (2.45) BS01 rna N/A GO:0003735 ... P80340 40787583
    952431 9d0i:17 (2.45) BS02 MG N/A GO:0003735 ... P80340 40787583
    952432 9d0i:17 (2.45) BS03 MG N/A GO:0003735 ... P80340 40787583
    952433 9d0i:18 (2.45) BS01 rna N/A GO:0003735 ... Q5SKU1 40787583
    952434 9d0i:18 (2.45) BS02 MG N/A GO:0003735 ... Q5SKU1 40787583
    952435 9d0i:18 (2.45) BS03 MG N/A GO:0003735 ... Q5SKU1 40787583
    952436 9d0i:18 (2.45) BS04 MG N/A GO:0003735 ... Q5SKU1 40787583
    952437 9d0i:18 (2.45) BS05 MG N/A GO:0003735 ... Q5SKU1 40787583
    952438 9d0i:19 (2.45) BS01 rna N/A GO:0003735 ... Q5SHR2 40787583
    952439 9d0i:19 (2.45) BS02 ZN N/A GO:0003735 ... Q5SHR2 40787583
    952440 9d0i:1D (2.45) BS01 rna N/A GO:0002181 ... P60405 40787583
    952441 9d0i:1D (2.45) BS02 MG N/A GO:0002181 ... P60405 40787583
    952442 9d0i:1D (2.45) BS03 MG N/A GO:0002181 ... P60405 40787583
    952443 9d0i:1D (2.45) BS04 MG N/A GO:0002181 ... P60405 40787583
    952444 9d0i:1D (2.45) BS05 MG N/A GO:0002181 ... P60405 40787583
    952445 9d0i:1D (2.45) BS06 MG N/A GO:0002181 ... P60405 40787583
    952446 9d0i:1D (2.45) BS07 MG N/A GO:0002181 ... P60405 40787583
    952447 9d0i:1D (2.45) BS08 MG N/A GO:0002181 ... P60405 40787583
    952448 9d0i:1D (2.45) BS09 MG N/A GO:0002181 ... P60405 40787583
    952449 9d0i:1D (2.45) BS10 MG N/A GO:0002181 ... P60405 40787583
    952450 9d0i:1D (2.45) BS11 MG N/A GO:0002181 ... P60405 40787583
    952451 9d0i:1D (2.45) BS12 MG N/A GO:0002181 ... P60405 40787583
    952452 9d0i:1E (2.45) BS01 rna N/A GO:0003735 ... Q5SHN8 40787583
    952453 9d0i:1E (2.45) BS02 MG N/A GO:0003735 ... Q5SHN8 40787583
    952454 9d0i:1E (2.45) BS03 MG N/A GO:0003735 ... Q5SHN8 40787583
    952455 9d0i:1E (2.45) BS04 MG N/A GO:0003735 ... Q5SHN8 40787583
    952456 9d0i:1E (2.45) BS05 MG N/A GO:0003735 ... Q5SHN8 40787583
    952457 9d0i:1E (2.45) BS06 MG N/A GO:0003735 ... Q5SHN8 40787583
    952458 9d0i:1F (2.45) BS01 rna N/A GO:0003735 ... Q5SHN9 40787583
    952459 9d0i:1F (2.45) BS02 MG N/A GO:0003735 ... Q5SHN9 40787583
    952460 9d0i:1F (2.45) BS03 MG N/A GO:0003735 ... Q5SHN9 40787583
    952461 9d0i:1F (2.45) BS04 MG N/A GO:0003735 ... Q5SHN9 40787583
    952462 9d0i:1F (2.45) BS05 MG N/A GO:0003735 ... Q5SHN9 40787583
    952463 9d0i:1F (2.45) BS06 MG N/A GO:0003735 ... Q5SHN9 40787583
    952464 9d0i:1F (2.45) BS07 MG N/A GO:0003735 ... Q5SHN9 40787583
    952465 9d0i:1F (2.45) BS08 MG N/A GO:0003735 ... Q5SHN9 40787583
    952466 9d0i:1F (2.45) BS09 MG N/A GO:0003735 ... Q5SHN9 40787583
    952467 9d0i:1F (2.45) BS10 MG N/A GO:0003735 ... Q5SHN9 40787583
    952468 9d0i:1F (2.45) BS11 MG N/A GO:0003735 ... Q5SHN9 40787583
    952469 9d0i:1F (2.45) BS12 MG N/A GO:0003735 ... Q5SHN9 40787583
    952470 9d0i:1G (2.45) BS01 rna N/A GO:0000049 ... Q5SHQ0 40787583
    952471 9d0i:1G (2.45) BS02 rna N/A GO:0000049 ... Q5SHQ0 40787583
    952472 9d0i:1G (2.45) BS03 rna N/A GO:0000049 ... Q5SHQ0 40787583
    952473 9d0i:1G (2.45) BS04 MG N/A GO:0000049 ... Q5SHQ0 40787583
    952474 9d0i:1G (2.45) BS05 MG N/A GO:0000049 ... Q5SHQ0 40787583
    952475 9d0i:1H (2.45) BS01 rna N/A GO:0002181 ... P0DOY8 40787583
    952476 9d0i:1I (2.45) BS01 rna N/A GO:0003735 ... Q5SLQ1 40787583
    952477 9d0i:1I (2.45) BS02 MG N/A GO:0003735 ... Q5SLQ1 40787583
    952478 9d0i:1N (2.45) BS01 rna N/A GO:0003729 ... P60488 40787583
    952479 9d0i:1N (2.45) BS02 MG N/A GO:0003729 ... P60488 40787583
    952480 9d0i:1N (2.45) BS03 MG N/A GO:0003729 ... P60488 40787583
    952481 9d0i:1O (2.45) BS01 rna N/A GO:0003735 ... Q5SHP8 40787583
    952482 9d0i:1O (2.45) BS02 rna N/A GO:0003735 ... Q5SHP8 40787583
    952483 9d0i:1O (2.45) BS03 MG N/A GO:0003735 ... Q5SHP8 40787583
    952484 9d0i:1O (2.45) BS04 MG N/A GO:0003735 ... Q5SHP8 40787583
    952485 9d0i:1P (2.45) BS01 rna N/A GO:0003735 ... Q5SHQ7 40787583
    952486 9d0i:1P (2.45) BS02 MG N/A GO:0003735 ... Q5SHQ7 40787583
    952487 9d0i:1P (2.45) BS03 MG N/A GO:0003735 ... Q5SHQ7 40787583
    952488 9d0i:1P (2.45) BS04 MG N/A GO:0003735 ... Q5SHQ7 40787583
    952489 9d0i:1P (2.45) BS05 MG N/A GO:0003735 ... Q5SHQ7 40787583
    952490 9d0i:1P (2.45) BS06 MG N/A GO:0003735 ... Q5SHQ7 40787583
    952491 9d0i:1Q (2.45) BS01 rna N/A GO:0003735 ... P60489 40787583
    952492 9d0i:1Q (2.45) BS02 rna N/A GO:0003735 ... P60489 40787583
    952493 9d0i:1Q (2.45) BS03 rna N/A GO:0003735 ... P60489 40787583
    952494 9d0i:1Q (2.45) BS04 MG N/A GO:0003735 ... P60489 40787583
    952495 9d0i:1Q (2.45) BS05 MG N/A GO:0003735 ... P60489 40787583
    952496 9d0i:1Q (2.45) BS06 MG N/A GO:0003735 ... P60489 40787583
    952497 9d0i:1Q (2.45) BS07 MG N/A GO:0003735 ... P60489 40787583
    952498 9d0i:1R (2.45) BS01 rna N/A GO:0003735 ... Q9Z9H5 40787583
    952499 9d0i:1R (2.45) BS02 MG N/A GO:0003735 ... Q9Z9H5 40787583
    952500 9d0i:1R (2.45) BS03 MG N/A GO:0003735 ... Q9Z9H5 40787583
    952501 9d0i:1S (2.45) BS01 rna N/A GO:0003735 ... Q5SHQ4 40787583
    952502 9d0i:1S (2.45) BS02 rna N/A GO:0003735 ... Q5SHQ4 40787583
    952503 9d0i:1S (2.45) BS03 MG N/A GO:0003735 ... Q5SHQ4 40787583
    952504 9d0i:1S (2.45) BS04 MG N/A GO:0003735 ... Q5SHQ4 40787583
    952505 9d0i:1T (2.45) BS01 rna N/A GO:0003735 ... P60490 40787583
    952506 9d0i:1T (2.45) BS02 rna N/A GO:0003735 ... P60490 40787583
    952507 9d0i:1U (2.45) BS01 rna N/A GO:0000027 ... P60491 40787583
    952508 9d0i:1U (2.45) BS02 MG N/A GO:0000027 ... P60491 40787583
    952509 9d0i:1U (2.45) BS03 MG N/A GO:0000027 ... P60491 40787583
    952510 9d0i:1U (2.45) BS04 MG N/A GO:0000027 ... P60491 40787583
    952511 9d0i:1U (2.45) BS05 MG N/A GO:0000027 ... P60491 40787583
    952512 9d0i:1U (2.45) BS06 MG N/A GO:0000027 ... P60491 40787583
    952513 9d0i:1U (2.45) BS07 MG N/A GO:0000027 ... P60491 40787583
    952514 9d0i:1U (2.45) BS08 MG N/A GO:0000027 ... P60491 40787583
    952515 9d0i:1U (2.45) BS09 MG N/A GO:0000027 ... P60491 40787583
    952516 9d0i:1V (2.45) BS01 rna N/A GO:0003723 ... P60492 40787583
    952517 9d0i:1V (2.45) BS02 MG N/A GO:0003723 ... P60492 40787583
    952518 9d0i:1V (2.45) BS03 MG N/A GO:0003723 ... P60492 40787583
    952519 9d0i:1V (2.45) BS04 MG N/A GO:0003723 ... P60492 40787583
    952520 9d0i:1V (2.45) BS05 MG N/A GO:0003723 ... P60492 40787583
    952521 9d0i:1V (2.45) BS06 MG N/A GO:0003723 ... P60492 40787583
    952522 9d0i:1V (2.45) BS07 MG N/A GO:0003723 ... P60492 40787583
    952523 9d0i:1W (2.45) BS01 rna N/A GO:0003735 ... Q5SHP3 40787583
    952524 9d0i:1W (2.45) BS02 MG N/A GO:0003735 ... Q5SHP3 40787583
    952525 9d0i:1W (2.45) BS03 MG N/A GO:0003735 ... Q5SHP3 40787583
    952526 9d0i:1W (2.45) BS04 MG N/A GO:0003735 ... Q5SHP3 40787583
    952527 9d0i:1W (2.45) BS05 MG N/A GO:0003735 ... Q5SHP3 40787583
    952528 9d0i:1W (2.45) BS06 MG N/A GO:0003735 ... Q5SHP3 40787583
    952529 9d0i:1X (2.45) BS01 rna N/A GO:0003735 ... Q5SHP0 40787583
    952530 9d0i:1X (2.45) BS02 MG N/A GO:0003735 ... Q5SHP0 40787583
    952531 9d0i:1X (2.45) BS03 MG N/A GO:0003735 ... Q5SHP0 40787583
    952532 9d0i:1X (2.45) BS04 MG N/A GO:0003735 ... Q5SHP0 40787583
    952533 9d0i:1X (2.45) BS05 MG N/A GO:0003735 ... Q5SHP0 40787583
    952534 9d0i:1X (2.45) BS06 MG N/A GO:0003735 ... Q5SHP0 40787583
    952535 9d0i:1Y (2.45) BS01 rna N/A GO:0003723 ... Q5SHP9 40787583
    952536 9d0i:1Y (2.45) BS02 MG N/A GO:0003723 ... Q5SHP9 40787583
    952537 9d0i:1Y (2.45) BS03 ZN N/A GO:0003723 ... Q5SHP9 40787583
    952538 9d0i:1Z (2.45) BS01 rna N/A GO:0003723 ... Q5SHZ1 40787583
    952539 9d0i:1Z (2.45) BS02 rna N/A GO:0003723 ... Q5SHZ1 40787583
    952540 9d0i:1Z (2.45) BS03 MG N/A GO:0003723 ... Q5SHZ1 40787583
    952541 9d0i:1b (2.45) BS01 rna N/A GO:0003735 ... P80371 40787583
    952542 9d0i:1b (2.45) BS02 MG N/A GO:0003735 ... P80371 40787583
    952543 9d0i:1c (2.45) BS01 rna N/A GO:0003676 ... P80372 40787583
    952544 9d0i:1d (2.45) BS01 rna N/A GO:0003723 ... P80373 40787583
    952545 9d0i:1d (2.45) BS02 SF4 N/A GO:0003723 ... P80373 40787583
    952546 9d0i:1e (2.45) BS01 rna N/A GO:0003723 ... Q5SHQ5 40787583
    952547 9d0i:1e (2.45) BS02 MG N/A GO:0003723 ... Q5SHQ5 40787583
    952548 9d0i:1e (2.45) BS03 MG N/A GO:0003723 ... Q5SHQ5 40787583
    952549 9d0i:1f (2.45) BS01 rna N/A GO:0003735 ... Q5SLP8 40787583
    952550 9d0i:1g (2.45) BS01 rna N/A GO:0000049 ... P17291 40787583
    952551 9d0i:1g (2.45) BS02 rna N/A GO:0000049 ... P17291 40787583
    952552 9d0i:1h (2.45) BS01 rna N/A GO:0003735 ... P0DOY9 40787583
    952553 9d0i:1i (2.45) BS01 rna N/A GO:0003723 ... P80374 40787583
    952554 9d0i:1i (2.45) BS02 rna N/A GO:0003723 ... P80374 40787583
    952555 9d0i:1j (2.45) BS01 rna N/A GO:0000049 ... Q5SHN7 40787583
    952556 9d0i:1k (2.45) BS01 rna N/A GO:0003735 ... P80376 40787583
    952557 9d0i:1k (2.45) BS02 MG N/A GO:0003735 ... P80376 40787583
    952558 9d0i:1l (2.45) BS01 rna N/A GO:0000049 ... Q5SHN3 40787583
    952559 9d0i:1l (2.45) BS02 rna N/A GO:0000049 ... Q5SHN3 40787583
    952560 9d0i:1l (2.45) BS03 MG N/A GO:0000049 ... Q5SHN3 40787583
    952561 9d0i:1m (2.45) BS01 rna N/A GO:0000049 ... P80377 40787583
    952562 9d0i:1m (2.45) BS02 rna N/A GO:0000049 ... P80377 40787583
    952563 9d0i:1m (2.45) BS03 rna N/A GO:0000049 ... P80377 40787583
    952564 9d0i:1m (2.45) BS04 MG N/A GO:0000049 ... P80377 40787583
    952565 9d0i:1n (2.45) BS01 rna N/A GO:0003735 ... P0DOY6 40787583
    952566 9d0i:1n (2.45) BS02 ZN N/A GO:0003735 ... P0DOY6 40787583
    952567 9d0i:1o (2.45) BS01 rna N/A GO:0003735 ... Q5SJ76 40787583
    952568 9d0i:1o (2.45) BS02 rna N/A GO:0003735 ... Q5SJ76 40787583
    952569 9d0i:1p (2.45) BS01 rna N/A GO:0003735 ... Q5SJH3 40787583
    952570 9d0i:1q (2.45) BS01 rna N/A GO:0003735 ... P0DOY7 40787583
    952571 9d0i:1r (2.45) BS01 rna N/A GO:0003735 ... Q5SLQ0 40787583
    952572 9d0i:1s (2.45) BS01 rna N/A GO:0000028 ... Q5SHP2 40787583
    952573 9d0i:1t (2.45) BS01 rna N/A GO:0003723 ... P80380 40787583
    952574 9d0i:20 (2.45) BS01 rna N/A GO:0003735 ... P60493 40787583
    952575 9d0i:20 (2.45) BS02 rna N/A GO:0003735 ... P60493 40787583
    952576 9d0i:20 (2.45) BS03 rna N/A GO:0003735 ... P60493 40787583
    952577 9d0i:21 (2.45) BS01 rna N/A GO:0003735 ... P60494 40787583
    952578 9d0i:21 (2.45) BS02 rna N/A GO:0003735 ... P60494 40787583
    952579 9d0i:21 (2.45) BS03 MG N/A GO:0003735 ... P60494 40787583
    952580 9d0i:22 (2.45) BS01 rna N/A GO:0003735 ... Q5SHP6 40787583
    952581 9d0i:23 (2.45) BS01 rna N/A GO:0003735 ... Q5SHQ6 40787583
    952582 9d0i:23 (2.45) BS02 rna N/A GO:0003735 ... Q5SHQ6 40787583
    952583 9d0i:23 (2.45) BS03 MG N/A GO:0003735 ... Q5SHQ6 40787583
    952584 9d0i:24 (2.45) BS01 rna N/A GO:0003735 ... Q5SJE1 40787583
    952585 9d0i:24 (2.45) BS02 ZN N/A GO:0003735 ... Q5SJE1 40787583
    952586 9d0i:25 (2.45) BS01 rna N/A GO:0003735 ... P80339 40787583
    952587 9d0i:25 (2.45) BS02 MG N/A GO:0003735 ... P80339 40787583
    952588 9d0i:25 (2.45) BS03 ZN N/A GO:0003735 ... P80339 40787583
    952589 9d0i:26 (2.45) BS01 rna N/A GO:0003735 ... P35871 40787583
    952590 9d0i:26 (2.45) BS02 MG N/A GO:0003735 ... P35871 40787583
    952591 9d0i:26 (2.45) BS03 ZN N/A GO:0003735 ... P35871 40787583
    952592 9d0i:27 (2.45) BS01 rna N/A GO:0003735 ... P80340 40787583
    952593 9d0i:28 (2.45) BS01 rna N/A GO:0003735 ... Q5SKU1 40787583
    952594 9d0i:29 (2.45) BS01 rna N/A GO:0003735 ... Q5SHR2 40787583
    952595 9d0i:29 (2.45) BS02 MG N/A GO:0003735 ... Q5SHR2 40787583
    952596 9d0i:29 (2.45) BS03 ZN N/A GO:0003735 ... Q5SHR2 40787583
    952597 9d0i:2D (2.45) BS01 rna N/A GO:0002181 ... P60405 40787583
    952598 9d0i:2D (2.45) BS02 rna N/A GO:0002181 ... P60405 40787583
    952599 9d0i:2D (2.45) BS03 MG N/A GO:0002181 ... P60405 40787583
    952600 9d0i:2D (2.45) BS04 MG N/A GO:0002181 ... P60405 40787583

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).