SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4754 4755 4756 4757 4758 4759 4760 4761 4762 4763 4764 4765 4766 4767 4768 4769 4770 4771 4772 4773 4774 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    952601 9d0i:2D (2.45) BS05 MG N/A GO:0002181 ... P60405 40787583
    952602 9d0i:2E (2.45) BS01 rna N/A GO:0003735 ... Q5SHN8 40787583
    952603 9d0i:2F (2.45) BS01 rna N/A GO:0003735 ... Q5SHN9 40787583
    952604 9d0i:2F (2.45) BS02 MG N/A GO:0003735 ... Q5SHN9 40787583
    952605 9d0i:2F (2.45) BS03 MG N/A GO:0003735 ... Q5SHN9 40787583
    952606 9d0i:2F (2.45) BS04 MG N/A GO:0003735 ... Q5SHN9 40787583
    952607 9d0i:2F (2.45) BS05 MG N/A GO:0003735 ... Q5SHN9 40787583
    952608 9d0i:2G (2.45) BS01 rna N/A GO:0000049 ... Q5SHQ0 40787583
    952609 9d0i:2G (2.45) BS02 rna N/A GO:0000049 ... Q5SHQ0 40787583
    952610 9d0i:2G (2.45) BS03 rna N/A GO:0000049 ... Q5SHQ0 40787583
    952611 9d0i:2H (2.45) BS01 rna N/A GO:0002181 ... P0DOY8 40787583
    952612 9d0i:2I (2.45) BS01 rna N/A GO:0003735 ... Q5SLQ1 40787583
    952613 9d0i:2N (2.45) BS01 rna N/A GO:0003729 ... P60488 40787583
    952614 9d0i:2O (2.45) BS01 rna N/A GO:0003735 ... Q5SHP8 40787583
    952615 9d0i:2O (2.45) BS02 rna N/A GO:0003735 ... Q5SHP8 40787583
    952616 9d0i:2O (2.45) BS03 MG N/A GO:0003735 ... Q5SHP8 40787583
    952617 9d0i:2P (2.45) BS01 rna N/A GO:0003735 ... Q5SHQ7 40787583
    952618 9d0i:2Q (2.45) BS01 rna N/A GO:0003735 ... P60489 40787583
    952619 9d0i:2Q (2.45) BS02 rna N/A GO:0003735 ... P60489 40787583
    952620 9d0i:2Q (2.45) BS03 MG N/A GO:0003735 ... P60489 40787583
    952621 9d0i:2Q (2.45) BS04 MG N/A GO:0003735 ... P60489 40787583
    952622 9d0i:2Q (2.45) BS05 MG N/A GO:0003735 ... P60489 40787583
    952623 9d0i:2R (2.45) BS01 rna N/A GO:0003735 ... Q9Z9H5 40787583
    952624 9d0i:2S (2.45) BS01 rna N/A GO:0003735 ... Q5SHQ4 40787583
    952625 9d0i:2S (2.45) BS02 rna N/A GO:0003735 ... Q5SHQ4 40787583
    952626 9d0i:2T (2.45) BS01 rna N/A GO:0003735 ... P60490 40787583
    952627 9d0i:2T (2.45) BS02 rna N/A GO:0003735 ... P60490 40787583
    952628 9d0i:2U (2.45) BS01 rna N/A GO:0000027 ... P60491 40787583
    952629 9d0i:2U (2.45) BS02 MG N/A GO:0000027 ... P60491 40787583
    952630 9d0i:2V (2.45) BS01 rna N/A GO:0003723 ... P60492 40787583
    952631 9d0i:2V (2.45) BS02 MG N/A GO:0003723 ... P60492 40787583
    952632 9d0i:2W (2.45) BS01 rna N/A GO:0003735 ... Q5SHP3 40787583
    952633 9d0i:2W (2.45) BS02 MG N/A GO:0003735 ... Q5SHP3 40787583
    952634 9d0i:2W (2.45) BS03 MG N/A GO:0003735 ... Q5SHP3 40787583
    952635 9d0i:2X (2.45) BS01 rna N/A GO:0003735 ... Q5SHP0 40787583
    952636 9d0i:2X (2.45) BS02 MG N/A GO:0003735 ... Q5SHP0 40787583
    952637 9d0i:2Y (2.45) BS01 rna N/A GO:0003723 ... Q5SHP9 40787583
    952638 9d0i:2Y (2.45) BS02 ZN N/A GO:0003723 ... Q5SHP9 40787583
    952639 9d0i:2Z (2.45) BS01 rna N/A GO:0003723 ... Q5SHZ1 40787583
    952640 9d0i:2Z (2.45) BS02 rna N/A GO:0003723 ... Q5SHZ1 40787583
    952641 9d0i:2Z (2.45) BS03 MG N/A GO:0003723 ... Q5SHZ1 40787583
    952642 9d0i:2b (2.45) BS01 rna N/A GO:0003735 ... P80371 40787583
    952643 9d0i:2c (2.45) BS01 rna N/A GO:0003676 ... P80372 40787583
    952644 9d0i:2d (2.45) BS01 rna N/A GO:0003723 ... P80373 40787583
    952645 9d0i:2d (2.45) BS02 MG N/A GO:0003723 ... P80373 40787583
    952646 9d0i:2d (2.45) BS03 SF4 N/A GO:0003723 ... P80373 40787583
    952647 9d0i:2e (2.45) BS01 rna N/A GO:0003723 ... Q5SHQ5 40787583
    952648 9d0i:2e (2.45) BS02 MG N/A GO:0003723 ... Q5SHQ5 40787583
    952649 9d0i:2f (2.45) BS01 rna N/A GO:0003735 ... Q5SLP8 40787583
    952650 9d0i:2f (2.45) BS02 MG N/A GO:0003735 ... Q5SLP8 40787583
    952651 9d0i:2g (2.45) BS01 rna N/A GO:0000049 ... P17291 40787583
    952652 9d0i:2g (2.45) BS02 rna N/A GO:0000049 ... P17291 40787583
    952653 9d0i:2h (2.45) BS01 rna N/A GO:0003735 ... P0DOY9 40787583
    952654 9d0i:2i (2.45) BS01 rna N/A GO:0003723 ... P80374 40787583
    952655 9d0i:2i (2.45) BS02 rna N/A GO:0003723 ... P80374 40787583
    952656 9d0i:2j (2.45) BS01 rna N/A GO:0000049 ... Q5SHN7 40787583
    952657 9d0i:2k (2.45) BS01 rna N/A GO:0003735 ... P80376 40787583
    952658 9d0i:2k (2.45) BS02 rna N/A GO:0003735 ... P80376 40787583
    952659 9d0i:2k (2.45) BS03 MG N/A GO:0003735 ... P80376 40787583
    952660 9d0i:2l (2.45) BS01 rna N/A GO:0000049 ... Q5SHN3 40787583
    952661 9d0i:2l (2.45) BS02 MG N/A GO:0000049 ... Q5SHN3 40787583
    952662 9d0i:2m (2.45) BS01 rna N/A GO:0000049 ... P80377 40787583
    952663 9d0i:2n (2.45) BS01 rna N/A GO:0003735 ... P0DOY6 40787583
    952664 9d0i:2n (2.45) BS02 ZN N/A GO:0003735 ... P0DOY6 40787583
    952665 9d0i:2o (2.45) BS01 rna N/A GO:0003735 ... Q5SJ76 40787583
    952666 9d0i:2o (2.45) BS02 rna N/A GO:0003735 ... Q5SJ76 40787583
    952667 9d0i:2p (2.45) BS01 rna N/A GO:0003735 ... Q5SJH3 40787583
    952668 9d0i:2q (2.45) BS01 rna N/A GO:0003735 ... P0DOY7 40787583
    952669 9d0i:2q (2.45) BS02 MG N/A GO:0003735 ... P0DOY7 40787583
    952670 9d0i:2q (2.45) BS03 MG N/A GO:0003735 ... P0DOY7 40787583
    952671 9d0i:2r (2.45) BS01 rna N/A GO:0003735 ... Q5SLQ0 40787583
    952672 9d0i:2r (2.45) BS02 MG N/A GO:0003735 ... Q5SLQ0 40787583
    952673 9d0i:2s (2.45) BS01 rna N/A GO:0000028 ... Q5SHP2 40787583
    952674 9d0i:2t (2.45) BS01 rna N/A GO:0003723 ... P80380 40787583
    952675 9d0i:2t (2.45) BS02 MG N/A GO:0003723 ... P80380 40787583
    952676 9d0j:10 (2.5) BS01 rna N/A GO:0003735 ... P60493 40055575
    952677 9d0j:10 (2.5) BS02 rna N/A GO:0003735 ... P60493 40055575
    952678 9d0j:10 (2.5) BS03 MG N/A GO:0003735 ... P60493 40055575
    952679 9d0j:10 (2.5) BS04 MG N/A GO:0003735 ... P60493 40055575
    952680 9d0j:10 (2.5) BS05 MG N/A GO:0003735 ... P60493 40055575
    952681 9d0j:11 (2.5) BS01 rna N/A GO:0003735 ... P60494 40055575
    952682 9d0j:11 (2.5) BS02 MG N/A GO:0003735 ... P60494 40055575
    952683 9d0j:12 (2.5) BS01 rna N/A GO:0003735 ... Q5SHP6 40055575
    952684 9d0j:12 (2.5) BS02 MG N/A GO:0003735 ... Q5SHP6 40055575
    952685 9d0j:13 (2.5) BS01 rna N/A GO:0003735 ... Q5SHQ6 40055575
    952686 9d0j:13 (2.5) BS02 rna N/A GO:0003735 ... Q5SHQ6 40055575
    952687 9d0j:13 (2.5) BS03 MG N/A GO:0003735 ... Q5SHQ6 40055575
    952688 9d0j:13 (2.5) BS04 MG N/A GO:0003735 ... Q5SHQ6 40055575
    952689 9d0j:14 (2.5) BS01 rna N/A GO:0003735 ... Q5SJE1 40055575
    952690 9d0j:14 (2.5) BS02 ZN N/A GO:0003735 ... Q5SJE1 40055575
    952691 9d0j:15 (2.5) BS01 rna N/A GO:0003735 ... P80339 40055575
    952692 9d0j:15 (2.5) BS02 MG N/A GO:0003735 ... P80339 40055575
    952693 9d0j:15 (2.5) BS03 ZN N/A GO:0003735 ... P80339 40055575
    952694 9d0j:16 (2.5) BS01 rna N/A GO:0003735 ... P35871 40055575
    952695 9d0j:16 (2.5) BS02 MG N/A GO:0003735 ... P35871 40055575
    952696 9d0j:16 (2.5) BS03 MG N/A GO:0003735 ... P35871 40055575
    952697 9d0j:16 (2.5) BS04 MG N/A GO:0003735 ... P35871 40055575
    952698 9d0j:16 (2.5) BS05 ZN N/A GO:0003735 ... P35871 40055575
    952699 9d0j:17 (2.5) BS01 rna N/A GO:0003735 ... P80340 40055575
    952700 9d0j:17 (2.5) BS02 MG N/A GO:0003735 ... P80340 40055575
    952701 9d0j:17 (2.5) BS03 MG N/A GO:0003735 ... P80340 40055575
    952702 9d0j:18 (2.5) BS01 rna N/A GO:0003735 ... Q5SKU1 40055575
    952703 9d0j:18 (2.5) BS02 MG N/A GO:0003735 ... Q5SKU1 40055575
    952704 9d0j:18 (2.5) BS03 MG N/A GO:0003735 ... Q5SKU1 40055575
    952705 9d0j:18 (2.5) BS04 MG N/A GO:0003735 ... Q5SKU1 40055575
    952706 9d0j:19 (2.5) BS01 rna N/A GO:0003735 ... Q5SHR2 40055575
    952707 9d0j:19 (2.5) BS02 ZN N/A GO:0003735 ... Q5SHR2 40055575
    952708 9d0j:1D (2.5) BS01 rna N/A GO:0002181 ... P60405 40055575
    952709 9d0j:1D (2.5) BS02 rna N/A GO:0002181 ... P60405 40055575
    952710 9d0j:1D (2.5) BS03 MG N/A GO:0002181 ... P60405 40055575
    952711 9d0j:1D (2.5) BS04 MG N/A GO:0002181 ... P60405 40055575
    952712 9d0j:1D (2.5) BS05 MG N/A GO:0002181 ... P60405 40055575
    952713 9d0j:1D (2.5) BS06 MG N/A GO:0002181 ... P60405 40055575
    952714 9d0j:1D (2.5) BS07 MG N/A GO:0002181 ... P60405 40055575
    952715 9d0j:1D (2.5) BS08 MG N/A GO:0002181 ... P60405 40055575
    952716 9d0j:1D (2.5) BS09 MG N/A GO:0002181 ... P60405 40055575
    952717 9d0j:1D (2.5) BS10 MG N/A GO:0002181 ... P60405 40055575
    952718 9d0j:1D (2.5) BS11 MG N/A GO:0002181 ... P60405 40055575
    952719 9d0j:1D (2.5) BS12 MG N/A GO:0002181 ... P60405 40055575
    952720 9d0j:1E (2.5) BS01 rna N/A GO:0003735 ... Q5SHN8 40055575
    952721 9d0j:1E (2.5) BS02 MG N/A GO:0003735 ... Q5SHN8 40055575
    952722 9d0j:1E (2.5) BS03 MG N/A GO:0003735 ... Q5SHN8 40055575
    952723 9d0j:1E (2.5) BS04 MG N/A GO:0003735 ... Q5SHN8 40055575
    952724 9d0j:1E (2.5) BS05 MG N/A GO:0003735 ... Q5SHN8 40055575
    952725 9d0j:1E (2.5) BS06 MG N/A GO:0003735 ... Q5SHN8 40055575
    952726 9d0j:1F (2.5) BS01 rna N/A GO:0003735 ... Q5SHN9 40055575
    952727 9d0j:1F (2.5) BS02 MG N/A GO:0003735 ... Q5SHN9 40055575
    952728 9d0j:1F (2.5) BS03 MG N/A GO:0003735 ... Q5SHN9 40055575
    952729 9d0j:1F (2.5) BS04 MG N/A GO:0003735 ... Q5SHN9 40055575
    952730 9d0j:1F (2.5) BS05 MG N/A GO:0003735 ... Q5SHN9 40055575
    952731 9d0j:1F (2.5) BS06 MG N/A GO:0003735 ... Q5SHN9 40055575
    952732 9d0j:1F (2.5) BS07 MG N/A GO:0003735 ... Q5SHN9 40055575
    952733 9d0j:1F (2.5) BS08 MG N/A GO:0003735 ... Q5SHN9 40055575
    952734 9d0j:1F (2.5) BS09 MG N/A GO:0003735 ... Q5SHN9 40055575
    952735 9d0j:1F (2.5) BS10 MG N/A GO:0003735 ... Q5SHN9 40055575
    952736 9d0j:1G (2.5) BS01 rna N/A GO:0000049 ... Q5SHQ0 40055575
    952737 9d0j:1G (2.5) BS02 rna N/A GO:0000049 ... Q5SHQ0 40055575
    952738 9d0j:1G (2.5) BS03 MG N/A GO:0000049 ... Q5SHQ0 40055575
    952739 9d0j:1H (2.5) BS01 rna N/A GO:0002181 ... P0DOY8 40055575
    952740 9d0j:1I (2.5) BS01 rna N/A GO:0003735 ... Q5SLQ1 40055575
    952741 9d0j:1I (2.5) BS02 MG N/A GO:0003735 ... Q5SLQ1 40055575
    952742 9d0j:1N (2.5) BS01 rna N/A GO:0003729 ... P60488 40055575
    952743 9d0j:1N (2.5) BS02 MG N/A GO:0003729 ... P60488 40055575
    952744 9d0j:1N (2.5) BS03 MG N/A GO:0003729 ... P60488 40055575
    952745 9d0j:1O (2.5) BS01 rna N/A GO:0003735 ... Q5SHP8 40055575
    952746 9d0j:1O (2.5) BS02 rna N/A GO:0003735 ... Q5SHP8 40055575
    952747 9d0j:1O (2.5) BS03 MG N/A GO:0003735 ... Q5SHP8 40055575
    952748 9d0j:1O (2.5) BS04 MG N/A GO:0003735 ... Q5SHP8 40055575
    952749 9d0j:1O (2.5) BS05 MG N/A GO:0003735 ... Q5SHP8 40055575
    952750 9d0j:1P (2.5) BS01 rna N/A GO:0003735 ... Q5SHQ7 40055575
    952751 9d0j:1P (2.5) BS02 MG N/A GO:0003735 ... Q5SHQ7 40055575
    952752 9d0j:1P (2.5) BS03 MG N/A GO:0003735 ... Q5SHQ7 40055575
    952753 9d0j:1P (2.5) BS04 MG N/A GO:0003735 ... Q5SHQ7 40055575
    952754 9d0j:1P (2.5) BS05 MG N/A GO:0003735 ... Q5SHQ7 40055575
    952755 9d0j:1Q (2.5) BS01 rna N/A GO:0003735 ... P60489 40055575
    952756 9d0j:1Q (2.5) BS02 rna N/A GO:0003735 ... P60489 40055575
    952757 9d0j:1Q (2.5) BS03 rna N/A GO:0003735 ... P60489 40055575
    952758 9d0j:1Q (2.5) BS04 MG N/A GO:0003735 ... P60489 40055575
    952759 9d0j:1Q (2.5) BS05 MG N/A GO:0003735 ... P60489 40055575
    952760 9d0j:1Q (2.5) BS06 MG N/A GO:0003735 ... P60489 40055575
    952761 9d0j:1Q (2.5) BS07 MG N/A GO:0003735 ... P60489 40055575
    952762 9d0j:1R (2.5) BS01 rna N/A GO:0003735 ... Q9Z9H5 40055575
    952763 9d0j:1R (2.5) BS02 MG N/A GO:0003735 ... Q9Z9H5 40055575
    952764 9d0j:1R (2.5) BS03 MG N/A GO:0003735 ... Q9Z9H5 40055575
    952765 9d0j:1S (2.5) BS01 rna N/A GO:0003735 ... Q5SHQ4 40055575
    952766 9d0j:1S (2.5) BS02 rna N/A GO:0003735 ... Q5SHQ4 40055575
    952767 9d0j:1S (2.5) BS03 MG N/A GO:0003735 ... Q5SHQ4 40055575
    952768 9d0j:1S (2.5) BS04 MG N/A GO:0003735 ... Q5SHQ4 40055575
    952769 9d0j:1T (2.5) BS01 rna N/A GO:0003735 ... P60490 40055575
    952770 9d0j:1T (2.5) BS02 rna N/A GO:0003735 ... P60490 40055575
    952771 9d0j:1U (2.5) BS01 rna N/A GO:0000027 ... P60491 40055575
    952772 9d0j:1U (2.5) BS02 MG N/A GO:0000027 ... P60491 40055575
    952773 9d0j:1U (2.5) BS03 MG N/A GO:0000027 ... P60491 40055575
    952774 9d0j:1U (2.5) BS04 MG N/A GO:0000027 ... P60491 40055575
    952775 9d0j:1U (2.5) BS05 MG N/A GO:0000027 ... P60491 40055575
    952776 9d0j:1U (2.5) BS06 MG N/A GO:0000027 ... P60491 40055575
    952777 9d0j:1U (2.5) BS07 MG N/A GO:0000027 ... P60491 40055575
    952778 9d0j:1U (2.5) BS08 MG N/A GO:0000027 ... P60491 40055575
    952779 9d0j:1V (2.5) BS01 rna N/A GO:0003723 ... P60492 40055575
    952780 9d0j:1V (2.5) BS02 MG N/A GO:0003723 ... P60492 40055575
    952781 9d0j:1V (2.5) BS03 MG N/A GO:0003723 ... P60492 40055575
    952782 9d0j:1V (2.5) BS04 MG N/A GO:0003723 ... P60492 40055575
    952783 9d0j:1V (2.5) BS05 MG N/A GO:0003723 ... P60492 40055575
    952784 9d0j:1V (2.5) BS06 MG N/A GO:0003723 ... P60492 40055575
    952785 9d0j:1W (2.5) BS01 rna N/A GO:0003735 ... Q5SHP3 40055575
    952786 9d0j:1W (2.5) BS02 MG N/A GO:0003735 ... Q5SHP3 40055575
    952787 9d0j:1W (2.5) BS03 MG N/A GO:0003735 ... Q5SHP3 40055575
    952788 9d0j:1W (2.5) BS04 MG N/A GO:0003735 ... Q5SHP3 40055575
    952789 9d0j:1W (2.5) BS05 MG N/A GO:0003735 ... Q5SHP3 40055575
    952790 9d0j:1W (2.5) BS06 MG N/A GO:0003735 ... Q5SHP3 40055575
    952791 9d0j:1X (2.5) BS01 rna N/A GO:0003735 ... Q5SHP0 40055575
    952792 9d0j:1X (2.5) BS02 MG N/A GO:0003735 ... Q5SHP0 40055575
    952793 9d0j:1X (2.5) BS03 MG N/A GO:0003735 ... Q5SHP0 40055575
    952794 9d0j:1X (2.5) BS04 MG N/A GO:0003735 ... Q5SHP0 40055575
    952795 9d0j:1X (2.5) BS05 MG N/A GO:0003735 ... Q5SHP0 40055575
    952796 9d0j:1X (2.5) BS06 MG N/A GO:0003735 ... Q5SHP0 40055575
    952797 9d0j:1Y (2.5) BS01 rna N/A GO:0003723 ... Q5SHP9 40055575
    952798 9d0j:1Y (2.5) BS02 MG N/A GO:0003723 ... Q5SHP9 40055575
    952799 9d0j:1Y (2.5) BS03 ZN N/A GO:0003723 ... Q5SHP9 40055575
    952800 9d0j:1Z (2.5) BS01 rna N/A GO:0003723 ... Q5SHZ1 40055575

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).