SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    955201 9daq:A (2.35) BS01 A1A3E N/A GO:0004146 ... P0ABQ4 39950956
    955202 9dar:A (2.17) BS01 1CY N/A GO:0004146 ... P0ABQ4 39950956
    955203 9das:A (1.4) BS01 CA N/A N/A A0KNW4 40243363
    955204 9das:A (1.4) BS02 CA N/A N/A A0KNW4 40243363
    955205 9das:A (1.4) BS03 CA N/A N/A A0KNW4 40243363
    955206 9das:A (1.4) BS04 CA N/A N/A A0KNW4 40243363
    955207 9das:A (1.4) BS05 CA N/A N/A A0KNW4 40243363
    955208 9das:A (1.4) BS06 CA N/A N/A A0KNW4 40243363
    955209 9das:B (1.4) BS01 CA N/A N/A A0KNW4 40243363
    955210 9das:B (1.4) BS02 CA N/A N/A A0KNW4 40243363
    955211 9das:B (1.4) BS03 CA N/A N/A A0KNW4 40243363
    955212 9das:B (1.4) BS04 CA N/A N/A A0KNW4 40243363
    955213 9das:B (1.4) BS05 CA N/A N/A A0KNW4 40243363
    955214 9dat:A (2.9) BS01 Y6H N/A GO:0000045 ... Q86WV6 41639452
    955215 9dat:A (2.9) BS02 A1BBH N/A GO:0000045 ... Q86WV6 41639452
    955216 9dat:A (2.9) BS03 Y01 N/A GO:0000045 ... Q86WV6 41639452
    955217 9dat:A (2.9) BS04 1SY N/A GO:0000045 ... Q86WV6 41639452
    955218 9dat:B (2.9) BS01 1SY N/A GO:0000045 ... Q86WV6 41639452
    955219 9dat:C (2.9) BS01 Y6H N/A GO:0000045 ... Q86WV6 41639452
    955220 9dat:C (2.9) BS02 1SY N/A GO:0000045 ... Q86WV6 41639452
    955221 9dat:C (2.9) BS03 A1BBH N/A GO:0000045 ... Q86WV6 41639452
    955222 9dat:C (2.9) BS04 Y01 N/A GO:0000045 ... Q86WV6 41639452
    955223 9dat:D (2.9) BS01 1SY N/A GO:0000045 ... Q86WV6 41639452
    955224 9dau:A (3.6) BS01 TTP N/A GO:0000166 ... A0A3G6JS83 41313771
    955225 9dau:A (3.6) BS02 DTP N/A GO:0000166 ... A0A3G6JS83 41313771
    955226 9dau:A (3.6) BS03 DTP N/A GO:0000166 ... A0A3G6JS83 41313771
    955227 9dau:A (3.6) BS04 ZN N/A GO:0000166 ... A0A3G6JS83 41313771
    955228 9dau:A (3.6) BS05 TTP N/A GO:0000166 ... A0A3G6JS83 41313771
    955229 9dau:B (3.6) BS01 TTP N/A GO:0000166 ... A0A3G6JS83 41313771
    955230 9dau:B (3.6) BS02 TTP N/A GO:0000166 ... A0A3G6JS83 41313771
    955231 9dau:B (3.6) BS03 DTP N/A GO:0000166 ... A0A3G6JS83 41313771
    955232 9dau:B (3.6) BS04 DTP N/A GO:0000166 ... A0A3G6JS83 41313771
    955233 9dau:B (3.6) BS05 ZN N/A GO:0000166 ... A0A3G6JS83 41313771
    955234 9dav:A (2.8) BS01 Y6H N/A GO:0000045 ... Q86WV6 41639452
    955235 9dav:A (2.8) BS02 1SY N/A GO:0000045 ... Q86WV6 41639452
    955236 9dav:B (2.8) BS01 1SY N/A GO:0000045 ... Q86WV6 41639452
    955237 9dav:C (2.8) BS01 1SY N/A GO:0000045 ... Q86WV6 41639452
    955238 9dav:C (2.8) BS02 Y6H N/A GO:0000045 ... Q86WV6 41639452
    955239 9dav:D (2.8) BS01 1SY N/A GO:0000045 ... Q86WV6 41639452
    955240 9daw:A (2.9) BS01 A1BBH N/A GO:0000045 ... Q86WV6 41639452
    955241 9daw:A (2.9) BS02 Y01 N/A GO:0000045 ... Q86WV6 41639452
    955242 9daw:A (2.9) BS03 1SY N/A GO:0000045 ... Q86WV6 41639452
    955243 9daw:A (2.9) BS04 9IM N/A GO:0000045 ... Q86WV6 41639452
    955244 9daw:A (2.9) BS05 A1BBH N/A GO:0000045 ... Q86WV6 41639452
    955245 9daw:B (2.9) BS01 1SY N/A GO:0000045 ... Q86WV6 41639452
    955246 9daw:B (2.9) BS02 9IM N/A GO:0000045 ... Q86WV6 41639452
    955247 9daw:C (2.9) BS01 A1BBH N/A GO:0000045 ... Q86WV6 41639452
    955248 9daw:C (2.9) BS02 1SY N/A GO:0000045 ... Q86WV6 41639452
    955249 9daw:C (2.9) BS03 A1BBH N/A GO:0000045 ... Q86WV6 41639452
    955250 9daw:C (2.9) BS04 Y01 N/A GO:0000045 ... Q86WV6 41639452
    955251 9daw:C (2.9) BS05 9IM N/A GO:0000045 ... Q86WV6 41639452
    955252 9daw:D (2.9) BS01 1SY N/A GO:0000045 ... Q86WV6 41639452
    955253 9daw:D (2.9) BS02 9IM N/A GO:0000045 ... Q86WV6 41639452
    955254 9dax:A (3.3) BS01 CA N/A GO:0001525 ... P08514 40101235
    955255 9dax:A (3.3) BS02 CA N/A GO:0001525 ... P08514 40101235
    955256 9dax:A (3.3) BS03 CA N/A GO:0001525 ... P08514 40101235
    955257 9dax:A (3.3) BS04 CA N/A GO:0001525 ... P08514 40101235
    955258 9dax:B (3.3) BS01 MG N/A GO:0001525 ... P05106 40101235
    955259 9dax:B (3.3) BS02 CA N/A GO:0001525 ... P05106 40101235
    955260 9dax:B (3.3) BS03 CA N/A GO:0001525 ... P05106 40101235
    955261 9daz:A (2.5) BS01 ZN N/A GO:0002003 ... P79171 40634609
    955262 9daz:B (2.5) BS01 FUC N/A GO:0019064 ... P10033 40634609
    955263 9daz:C (2.5) BS01 ZN N/A GO:0002003 ... P79171 40634609
    955264 9daz:D (2.5) BS01 FUC N/A GO:0019064 ... P10033 40634609
    955265 9db2:A (2.6) BS01 DTP N/A GO:0004748 ... P00452 39475643
    955266 9db2:A (2.6) BS02 ATP N/A GO:0004748 ... P00452 39475643
    955267 9db2:A (2.6) BS03 ATP N/A GO:0004748 ... P00452 39475643
    955268 9db2:A (2.6) BS04 DTP N/A GO:0004748 ... P00452 39475643
    955269 9db2:B (2.6) BS01 DTP N/A GO:0004748 ... P00452 39475643
    955270 9db2:B (2.6) BS02 ATP N/A GO:0004748 ... P00452 39475643
    955271 9db2:B (2.6) BS03 ATP N/A GO:0004748 ... P00452 39475643
    955272 9db2:B (2.6) BS04 DTP N/A GO:0004748 ... P00452 39475643
    955273 9db2:B (2.6) BS05 A1A3L N/A GO:0004748 ... P00452 39475643
    955274 9db2:C (2.6) BS01 FEO N/A GO:0004748 ... P69924 39475643
    955275 9db2:D (2.6) BS01 FEO N/A GO:0004748 ... P69924 39475643
    955276 9db6:A (2.1) BS01 DAN N/A GO:0004308 ... K5BUM2 N/A
    955277 9db6:B (2.1) BS01 DAN N/A GO:0004308 ... K5BUM2 N/A
    955278 9db6:C (2.1) BS01 DAN N/A GO:0004308 ... K5BUM2 N/A
    955279 9db6:D (2.1) BS01 DAN N/A GO:0004308 ... K5BUM2 N/A
    955280 9db7:A (1.78) BS01 A1A14 N/A N/A N/A 41835567
    955281 9db7:A (1.78) BS02 A1A14 N/A N/A N/A 41835567
    955282 9db7:A (1.78) BS03 ZN N/A N/A N/A 41835567
    955283 9db7:A (1.78) BS04 ZN N/A N/A N/A 41835567
    955284 9db7:B (1.78) BS01 A1A14 N/A N/A N/A 41835567
    955285 9db7:B (1.78) BS02 A1A14 N/A N/A N/A 41835567
    955286 9db7:B (1.78) BS03 ZN N/A N/A N/A 41835567
    955287 9db7:B (1.78) BS04 ZN N/A N/A N/A 41835567
    955288 9dbd:A (2.6) BS01 ZN N/A GO:0005506 ... N/A 40700614
    955289 9dbf:A (3.2) BS01 ZN N/A GO:0005506 ... N/A 40700614
    955290 9dbh:A (1.88) BS01 dna N/A N/A N/A 40306316
    955291 9dbh:B (1.88) BS01 dna N/A N/A N/A 40306316
    955292 9dbh:B (1.88) BS02 MN N/A N/A N/A 40306316
    955293 9dbh:C (1.88) BS01 dna N/A N/A N/A 40306316
    955294 9dbh:D (1.88) BS01 dna N/A N/A N/A 40306316
    955295 9dbh:D (1.88) BS02 MN N/A N/A N/A 40306316
    955296 9dbj:A (2.41) BS01 A1A3G N/A N/A N/A 40306316
    955297 9dbj:A (2.41) BS02 F2A N/A N/A N/A 40306316
    955298 9dbj:A (2.41) BS03 MN N/A N/A N/A 40306316
    955299 9dbj:A (2.41) BS04 MN N/A N/A N/A 40306316
    955300 9dbj:B (2.41) BS01 F2A N/A N/A N/A 40306316
    955301 9dbj:B (2.41) BS02 MN N/A N/A N/A 40306316
    955302 9dbj:B (2.41) BS03 MN N/A N/A N/A 40306316
    955303 9dbj:C (2.41) BS01 A1A3H N/A N/A N/A 40306316
    955304 9dbj:C (2.41) BS02 F2A N/A N/A N/A 40306316
    955305 9dbj:C (2.41) BS03 MN N/A N/A N/A 40306316
    955306 9dbj:C (2.41) BS04 MN N/A N/A N/A 40306316
    955307 9dbj:D (2.41) BS01 F2A N/A N/A N/A 40306316
    955308 9dbj:D (2.41) BS02 MN N/A N/A N/A 40306316
    955309 9dbj:D (2.41) BS03 MN N/A N/A N/A 40306316
    955310 9dbj:E (2.41) BS01 F2A N/A N/A N/A 40306316
    955311 9dbj:E (2.41) BS02 MN N/A N/A N/A 40306316
    955312 9dbj:E (2.41) BS03 MN N/A N/A N/A 40306316
    955313 9dbj:F (2.41) BS01 F2A N/A N/A N/A 40306316
    955314 9dbj:F (2.41) BS02 MN N/A N/A N/A 40306316
    955315 9dbj:F (2.41) BS03 MN N/A N/A N/A 40306316
    955316 9dbk:A (3.12) BS01 CLR N/A GO:0001518 ... Q9Y5Y9 39920100
    955317 9dbk:A (3.12) BS02 CLR N/A GO:0001518 ... Q9Y5Y9 39920100
    955318 9dbk:A (3.12) BS03 CLR N/A GO:0001518 ... Q9Y5Y9 39920100
    955319 9dbk:A (3.12) BS04 CLR N/A GO:0001518 ... Q9Y5Y9 39920100
    955320 9dbk:A (3.12) BS05 LPE N/A GO:0001518 ... Q9Y5Y9 39920100
    955321 9dbk:A (3.12) BS06 LPE N/A GO:0001518 ... Q9Y5Y9 39920100
    955322 9dbk:A (3.12) BS07 LPE N/A GO:0001518 ... Q9Y5Y9 39920100
    955323 9dbk:A (3.12) BS08 LPE N/A GO:0001518 ... Q9Y5Y9 39920100
    955324 9dbk:A (3.12) BS09 LPE N/A GO:0001518 ... Q9Y5Y9 39920100
    955325 9dbk:A (3.12) BS10 LPE N/A GO:0001518 ... Q9Y5Y9 39920100
    955326 9dbk:A (3.12) BS11 LPE N/A GO:0001518 ... Q9Y5Y9 39920100
    955327 9dbk:A (3.12) BS12 P5S N/A GO:0001518 ... Q9Y5Y9 39920100
    955328 9dbk:A (3.12) BS13 P5S N/A GO:0001518 ... Q9Y5Y9 39920100
    955329 9dbk:A (3.12) BS14 CLR N/A GO:0001518 ... Q9Y5Y9 39920100
    955330 9dbl:A (3.24) BS01 CLR N/A GO:0001518 ... Q9Y5Y9 39920100
    955331 9dbl:A (3.24) BS02 CLR N/A GO:0001518 ... Q9Y5Y9 39920100
    955332 9dbl:A (3.24) BS03 CLR N/A GO:0001518 ... Q9Y5Y9 39920100
    955333 9dbl:A (3.24) BS04 CLR N/A GO:0001518 ... Q9Y5Y9 39920100
    955334 9dbl:A (3.24) BS05 CLR N/A GO:0001518 ... Q9Y5Y9 39920100
    955335 9dbl:A (3.24) BS06 LPE N/A GO:0001518 ... Q9Y5Y9 39920100
    955336 9dbl:A (3.24) BS07 LPE N/A GO:0001518 ... Q9Y5Y9 39920100
    955337 9dbl:A (3.24) BS08 LPE N/A GO:0001518 ... Q9Y5Y9 39920100
    955338 9dbl:A (3.24) BS09 LPE N/A GO:0001518 ... Q9Y5Y9 39920100
    955339 9dbl:A (3.24) BS10 LPE N/A GO:0001518 ... Q9Y5Y9 39920100
    955340 9dbl:A (3.24) BS11 LPE N/A GO:0001518 ... Q9Y5Y9 39920100
    955341 9dbl:A (3.24) BS12 LPE N/A GO:0001518 ... Q9Y5Y9 39920100
    955342 9dbl:A (3.24) BS13 P5S N/A GO:0001518 ... Q9Y5Y9 39920100
    955343 9dbl:A (3.24) BS14 P5S N/A GO:0001518 ... Q9Y5Y9 39920100
    955344 9dbm:A (3.22) BS01 CLR N/A GO:0001518 ... Q9Y5Y9 39920100
    955345 9dbm:A (3.22) BS02 CLR N/A GO:0001518 ... Q9Y5Y9 39920100
    955346 9dbm:A (3.22) BS03 CLR N/A GO:0001518 ... Q9Y5Y9 39920100
    955347 9dbm:A (3.22) BS04 CLR N/A GO:0001518 ... Q9Y5Y9 39920100
    955348 9dbm:A (3.22) BS05 LPE N/A GO:0001518 ... Q9Y5Y9 39920100
    955349 9dbm:A (3.22) BS06 LPE N/A GO:0001518 ... Q9Y5Y9 39920100
    955350 9dbm:A (3.22) BS07 LPE N/A GO:0001518 ... Q9Y5Y9 39920100
    955351 9dbm:A (3.22) BS08 LPE N/A GO:0001518 ... Q9Y5Y9 39920100
    955352 9dbm:A (3.22) BS09 LPE N/A GO:0001518 ... Q9Y5Y9 39920100
    955353 9dbm:A (3.22) BS10 LPE N/A GO:0001518 ... Q9Y5Y9 39920100
    955354 9dbm:A (3.22) BS11 P5S N/A GO:0001518 ... Q9Y5Y9 39920100
    955355 9dbm:A (3.22) BS12 P5S N/A GO:0001518 ... Q9Y5Y9 39920100
    955356 9dbm:A (3.22) BS13 CLR N/A GO:0001518 ... Q9Y5Y9 39920100
    955357 9dbn:A (2.76) BS01 CLR N/A GO:0001518 ... Q9Y5Y9 39920100
    955358 9dbn:A (2.76) BS02 CLR N/A GO:0001518 ... Q9Y5Y9 39920100
    955359 9dbn:A (2.76) BS03 CLR N/A GO:0001518 ... Q9Y5Y9 39920100
    955360 9dbn:A (2.76) BS04 LPE N/A GO:0001518 ... Q9Y5Y9 39920100
    955361 9dbn:A (2.76) BS05 LPE N/A GO:0001518 ... Q9Y5Y9 39920100
    955362 9dbn:A (2.76) BS06 LPE N/A GO:0001518 ... Q9Y5Y9 39920100
    955363 9dbn:A (2.76) BS07 LPE N/A GO:0001518 ... Q9Y5Y9 39920100
    955364 9dbn:A (2.76) BS08 LPE N/A GO:0001518 ... Q9Y5Y9 39920100
    955365 9dbn:A (2.76) BS09 P5S N/A GO:0001518 ... Q9Y5Y9 39920100
    955366 9dbn:A (2.76) BS10 P5S N/A GO:0001518 ... Q9Y5Y9 39920100
    955367 9dbn:A (2.76) BS11 CLR N/A GO:0001518 ... Q9Y5Y9 39920100
    955368 9dbp:A (2.66) BS01 FAD N/A GO:0005634 ... O60341 40332031
    955369 9dbp:A (2.66) BS02 A1A5U N/A GO:0005634 ... O60341 40332031
    955370 9dbq:A (2.9) BS01 Y01 N/A GO:0000139 ... Q9NP58 39557842
    955371 9dbq:A (2.9) BS02 Y01 N/A GO:0000139 ... Q9NP58 39557842
    955372 9dbq:A (2.9) BS03 Y01 N/A GO:0000139 ... Q9NP58 39557842
    955373 9dbq:A (2.9) BS04 Y01 N/A GO:0000139 ... Q9NP58 39557842
    955374 9dbq:A (2.9) BS05 Y01 N/A GO:0000139 ... Q9NP58 39557842
    955375 9dbq:A (2.9) BS06 Y01 N/A GO:0000139 ... Q9NP58 39557842
    955376 9dbq:A (2.9) BS07 Y01 N/A GO:0000139 ... Q9NP58 39557842
    955377 9dbq:A (2.9) BS08 Y01 N/A GO:0000139 ... Q9NP58 39557842
    955378 9dbq:A (2.9) BS09 Y01 N/A GO:0000139 ... Q9NP58 39557842
    955379 9dbq:B (2.9) BS01 Y01 N/A GO:0000139 ... Q9NP58 39557842
    955380 9dbq:B (2.9) BS02 Y01 N/A GO:0000139 ... Q9NP58 39557842
    955381 9dbq:B (2.9) BS03 Y01 N/A GO:0000139 ... Q9NP58 39557842
    955382 9dbq:B (2.9) BS04 Y01 N/A GO:0000139 ... Q9NP58 39557842
    955383 9dbq:B (2.9) BS05 Y01 N/A GO:0000139 ... Q9NP58 39557842
    955384 9dbq:B (2.9) BS06 Y01 N/A GO:0000139 ... Q9NP58 39557842
    955385 9dbq:B (2.9) BS07 Y01 N/A GO:0000139 ... Q9NP58 39557842
    955386 9dbq:B (2.9) BS08 Y01 N/A GO:0000139 ... Q9NP58 39557842
    955387 9dbq:B (2.9) BS09 Y01 N/A GO:0000139 ... Q9NP58 39557842
    955388 9dby:A (2.8) BS01 dna N/A GO:0000786 ... P84233 39537923
    955389 9dby:A (2.8) BS02 dna N/A GO:0000786 ... P84233 39537923
    955390 9dby:B (2.8) BS01 dna N/A GO:0000786 ... P62799 39537923
    955391 9dby:B (2.8) BS02 dna N/A GO:0000786 ... P62799 39537923
    955392 9dby:C (2.8) BS01 dna N/A GO:0000786 ... P06897 39537923
    955393 9dby:C (2.8) BS02 dna N/A GO:0000786 ... P06897 39537923
    955394 9dby:D (2.8) BS01 dna N/A GO:0000786 ... P02281 39537923
    955395 9dby:D (2.8) BS02 dna N/A GO:0000786 ... P02281 39537923
    955396 9dby:E (2.8) BS01 dna N/A GO:0000786 ... P84233 39537923
    955397 9dby:E (2.8) BS02 dna N/A GO:0000786 ... P84233 39537923
    955398 9dby:F (2.8) BS01 dna N/A GO:0000786 ... P62799 39537923
    955399 9dby:G (2.8) BS01 dna N/A GO:0000786 ... P06897 39537923
    955400 9dby:G (2.8) BS02 dna N/A GO:0000786 ... P06897 39537923

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).