SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    95401 2mse:B (-1.00) BS02 MG 3.6.5.2 GO:0000139 ... P01116 25941399
    95402 2mse:D (-1.00) BS01 17F 2.7.11.1 GO:0007165 ... P10398 25941399
    95403 2mse:D (-1.00) BS02 17F 2.7.11.1 GO:0007165 ... P10398 25941399
    95404 2mse:D (-1.00) BS03 17F 2.7.11.1 GO:0007165 ... P10398 25941399
    95405 2msr:B (-1.00) BS01 peptide ? N/A O75475 25082813
    95406 2mt5:A (-1.00) BS01 ZN ? GO:0005680 ... Q9NYG5 25306923
    95407 2mt9:A (-1.00) BS01 FMN ? GO:0009055 ... P0ABY4 25380767
    95408 2mta:A (2.4) BS01 CU ? GO:0005507 ... P22364 8140419
    95409 2mta:C (2.4) BS01 HEC ? GO:0005506 ... P29899 8140419
    95410 2mte:A (-1.00) BS01 CA 3.2.1.176 GO:0000272 ... P0C2S5 25270376
    95411 2mte:A (-1.00) BS02 CA 3.2.1.176 GO:0000272 ... P0C2S5 25270376
    95412 2mtp:A (-1.00) BS01 peptide ? GO:0030036 ... P21333 25849143
    95413 2mtp:C (-1.00) BS01 peptide ? N/A P05106 25849143
    95414 2mtv:A (-1.00) BS01 rna ? GO:0003723 ... Q9QY02 25389274
    95415 2mtz:A (-1.00) BS01 peptide 2.-.-.- GO:0009252 ... O34816 25429710
    95416 2mtz:A (-1.00) BS02 peptide 2.-.-.- GO:0009252 ... O34816 25429710
    95417 2mtz:A (-1.00) BS03 AMU 2.-.-.- GO:0009252 ... O34816 25429710
    95418 2mtz:A (-1.00) BS04 AMU 2.-.-.- GO:0009252 ... O34816 25429710
    95419 2muc:A (2.3) BS01 MN 5.5.1.1 GO:0003824 ... P08310 10336378
    95420 2muc:B (2.3) BS01 MN 5.5.1.1 GO:0003824 ... P08310 10336378
    95421 2mum:A (-1.00) BS01 ZN ? N/A P38806 N/A
    95422 2mum:A (-1.00) BS02 ZN ? N/A P38806 N/A
    95423 2muq:A (-1.00) BS01 ZN ? GO:0043130 ... Q6NZ36 25414354
    95424 2mur:A (-1.00) BS01 ZN ? GO:0043130 ... Q6NZ36 25414354
    95425 2mus:B (-1.00) BS01 3LS ? N/A Q03689 26246168
    95426 2mus:C (-1.00) BS01 3LS ? N/A Q03689 26246168
    95427 2mus:D (-1.00) BS01 3LS ? N/A Q03689 26246168
    95428 2muw:C (-1.00) BS01 3LW ? GO:0015078 ... B0LX40 25470189
    95429 2mv7:A (-1.00) BS01 peptide ? N/A P42568 25921540
    95430 2mvc:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 25423173
    95431 2mvd:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 25423173
    95432 2mvu:A (-1.00) BS01 SDO ? GO:0000035 ... Q02054 N/A
    95433 2mvv:A (-1.00) BS01 SXR ? GO:0000035 ... Q02054 N/A
    95434 2mvw:A (-1.00) BS01 ZN 2.3.2.- GO:0008270 ... P29590 25355412
    95435 2mvw:B (-1.00) BS01 ZN 2.3.2.- GO:0008270 ... P29590 25355412
    95436 2mwg:A (-1.00) BS01 FMN ? N/A O34627 N/A
    95437 2mwg:B (-1.00) BS01 FMN ? N/A O34627 N/A
    95438 2mwj:A (-1.00) BS01 MAN 3.2.1.91 GO:0005576 ... P62694 26307003
    95439 2mwj:A (-1.00) BS02 MAN 3.2.1.91 GO:0005576 ... P62694 26307003
    95440 2mwk:A (-1.00) BS01 MAN 3.2.1.91 GO:0005576 ... P62694 26307003
    95441 2mwk:A (-1.00) BS02 MAN 3.2.1.91 GO:0005576 ... P62694 26307003
    95442 2mwk:A (-1.00) BS03 MAN 3.2.1.91 GO:0005576 ... P62694 26307003
    95443 2mwn:B (-1.00) BS01 peptide ? N/A Q9Y490 25520155
    95444 2mwo:A (-1.00) BS01 peptide ? N/A Q12888 25579814
    95445 2mwp:A (-1.00) BS01 peptide ? N/A Q12888 25579814
    95446 2mwx:A (-1.00) BS01 ZN 2.3.2.- N/A P29590 25627356
    95447 2mwx:A (-1.00) BS02 ZN 2.3.2.- N/A P29590 25627356
    95448 2mwy:A (-1.00) BS01 peptide ? GO:0005634 ... O15151 26812210
    95449 2mx6:A (-1.00) BS01 peptide ? GO:0016055 ... P51141 N/A
    95450 2mxf:A (-1.00) BS01 dna ? N/A Q9HW86 26068099
    95451 2mxf:A (-1.00) BS02 dna ? N/A Q9HW86 26068099
    95452 2mxp:A (-1.00) BS01 ZN ? N/A Q13137 26506893
    95453 2mxv:A (-1.00) BS01 ZN ? N/A P98175 N/A
    95454 2mxy:A (-1.00) BS01 rna ? GO:0003676 ... P07910 25216038
    95455 2my1:A (-1.00) BS01 ZN ? GO:0000282 ... P25337 25703931
    95456 2my1:A (-1.00) BS02 ZN ? GO:0000282 ... P25337 25703931
    95457 2my1:A (-1.00) BS03 ZN ? GO:0000282 ... P25337 25703931
    95458 2my3:A (-1.00) BS01 peptide ? GO:0003676 ... P40565 26212312
    95459 2my5:A (-1.00) BS01 PN7 ? N/A A0A023GUP0 N/A
    95460 2mya:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    95461 2myb:A (1.9) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    95462 2myb:A (1.9) BS02 MNC 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    95463 2myc:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    95464 2myd:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    95465 2myd:A (1.8) BS02 NPN 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    95466 2mye:A (1.68) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    95467 2mz1:A (-1.00) BS01 rna ? GO:0003676 ... P07910 25216038
    95468 2mz9:A (-1.00) BS01 HEC ? GO:0009055 ... Q8GGK7 28062839
    95469 2mz9:A (-1.00) BS02 HEC ? GO:0009055 ... Q8GGK7 28062839
    95470 2mz9:A (-1.00) BS03 HEC ? GO:0009055 ... Q8GGK7 28062839
    95471 2mzd:A (-1.00) BS01 peptide 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q09472 25753752
    95472 2mze:A (-1.00) BS01 CA 3.4.24.23 GO:0004175 ... P09237 26439767
    95473 2mze:A (-1.00) BS02 CA 3.4.24.23 GO:0004175 ... P09237 26439767
    95474 2mze:A (-1.00) BS03 ZN 3.4.24.23 GO:0004175 ... P09237 26439767
    95475 2mze:A (-1.00) BS04 ZN 3.4.24.23 GO:0004175 ... P09237 26439767
    95476 2mzh:A (-1.00) BS01 CA 3.4.24.23 GO:0004175 ... P09237 26439767
    95477 2mzh:A (-1.00) BS02 CA 3.4.24.23 GO:0004175 ... P09237 26439767
    95478 2mzh:A (-1.00) BS03 ZN 3.4.24.23 GO:0004175 ... P09237 26439767
    95479 2mzh:A (-1.00) BS04 ZN 3.4.24.23 GO:0004175 ... P09237 26439767
    95480 2mzi:A (-1.00) BS01 CA 3.4.24.23 GO:0004175 ... P09237 26439767
    95481 2mzi:A (-1.00) BS02 CA 3.4.24.23 GO:0004175 ... P09237 26439767
    95482 2mzi:A (-1.00) BS03 ZN 3.4.24.23 GO:0004175 ... P09237 26439767
    95483 2mzi:A (-1.00) BS04 ZN 3.4.24.23 GO:0004175 ... P09237 26439767
    95484 2mzi:A (-1.00) BS05 C3S 3.4.24.23 GO:0004175 ... P09237 26439767
    95485 2mzp:C (-1.00) BS01 peptide ? GO:0005509 ... P63316 25996354
    95486 2mzp:C (-1.00) BS02 CA ? GO:0005509 ... P63316 25996354
    95487 2mzw:B (-1.00) BS01 ZN ? GO:0005515 ... Q8GNY5 26781961
    95488 2mzz:A (-1.00) BS01 ZN N/A N/A N/A 25984970
    95489 2n01:B (-1.00) BS01 peptide N/A N/A N/A 27594685
    95490 2n02:A (-1.00) BS01 PKA ? GO:0005497 ... P50637 25974690
    95491 2n06:A (-1.00) BS01 44Z ? GO:0005634 ... O15151 26812210
    95492 2n0m:A (-1.00) BS01 CU1 ? GO:0005507 ... Q5F809 26589091
    95493 2n0s:A (-1.00) BS01 SF4 1.18.99.1 N/A Q9FYU1 26010059
    95494 2n0s:B (-1.00) BS01 FES ? GO:0009055 ... P07839 26010059
    95495 2n0u:A (-1.00) BS01 48M ? GO:0005634 ... O15151 26812210
    95496 2n0w:A (-1.00) BS01 48L ? GO:0005634 ... O15151 26812210
    95497 2n0y:A (-1.00) BS01 peptide ? N/A P32776 25918396
    95498 2n14:A (-1.00) BS01 49H ? GO:0005634 ... O15151 26812210
    95499 2n18:A (-1.00) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 25944250
    95500 2n18:B (-1.00) BS01 HEC ? GO:0005515 ... P00044 25944250
    95501 2n18:C (-1.00) BS01 HEC ? GO:0005515 ... P00044 25944250
    95502 2n1a:B (-1.00) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q92793 27129204
    95503 2n1a:B (-1.00) BS02 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q92793 27129204
    95504 2n1g:A (-1.00) BS01 peptide 2.7.7.- N/A Q9UBZ9 26982350
    95505 2n1o:A (-1.00) BS01 peptide 5.2.1.8 N/A Q13526 26456073
    95506 2n1u:A (-1.00) BS01 ZN ? N/A Q9HAJ7 26609676
    95507 2n23:A (-1.00) BS01 peptide ? N/A P32776 N/A
    95508 2n26:A (-1.00) BS01 ZN ? N/A Q13105 26972249
    95509 2n26:A (-1.00) BS02 ZN ? N/A Q13105 26972249
    95510 2n27:A (-1.00) BS01 CA ? GO:0000922 ... P0DP23 27339229
    95511 2n27:A (-1.00) BS02 CA ? GO:0000922 ... P0DP23 27339229
    95512 2n27:A (-1.00) BS03 CA ? GO:0000922 ... P0DP23 27339229
    95513 2n27:A (-1.00) BS04 4DY ? GO:0000922 ... P0DP23 27339229
    95514 2n2h:B (-1.00) BS01 peptide ? GO:0003714 ... Q60520 26124119
    95515 2n2v:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 26792393
    95516 2n2w:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 26792393
    95517 2n2x:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 26792393
    95518 2n3a:B (-1.00) BS01 peptide ? N/A O75475 26245978
    95519 2n3b:A (-1.00) BS01 HEC ? GO:0005515 ... P00004 26487716
    95520 2n3k:A (-1.00) BS01 peptide ? N/A O60885 26858406
    95521 2n3o:A (-1.00) BS01 rna ? GO:0003676 ... P26599 N/A
    95522 2n3y:A (-1.00) BS01 MH0 ? GO:0005515 ... P99999 28348229
    95523 2n4q:B (-1.00) BS01 peptide ? N/A P42568 N/A
    95524 2n5h:A (-1.00) BS01 PNS ? GO:0015833 ... Q4KCZ1 26340431
    95525 2n5i:A (-1.00) BS01 4EM ? GO:0015833 ... Q4KCZ1 26340431
    95526 2n6a:A (-1.00) BS01 CA ? GO:0000922 ... P0DP23
    Q9UKL4
    N/A
    95527 2n6a:A (-1.00) BS02 CA ? GO:0000922 ... P0DP23
    Q9UKL4
    N/A
    95528 2n6a:A (-1.00) BS03 CA ? GO:0000922 ... P0DP23
    Q9UKL4
    N/A
    95529 2n6a:A (-1.00) BS04 CA ? GO:0000922 ... P0DP23
    Q9UKL4
    N/A
    95530 2n6j:A (-1.00) BS01 ZN 3.4.24.89 GO:0005576 ... Q183R7 26711661
    95531 2n79:C (-1.00) BS01 CA ? GO:0005509 ... P63316 26341255
    95532 2n7b:A (-1.00) BS01 G6S ? N/A Q9NYZ4 27357658
    95533 2n7b:A (-1.00) BS02 SIA ? N/A Q9NYZ4 27357658
    95534 2n7c:A (-1.00) BS01 rna ? GO:0003676 ... Q8I3T5 30500338
    95535 2n7l:C (-1.00) BS01 CA ? GO:0005509 ... P19429
    P63316
    N/A
    95536 2n82:B (-1.00) BS01 rna ? GO:0000381 ... Q9NWB1 27001519
    95537 2n8a:A (-1.00) BS01 dna 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 26626479
    95538 2n8a:A (-1.00) BS02 ZN 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 26626479
    95539 2n8a:A (-1.00) BS03 ZN 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 26626479
    95540 2n8j:A (-1.00) BS01 peptide ? GO:0000922 ... P0DP23 27696828
    95541 2n8l:A (-1.00) BS01 rna ? GO:0003676 ... O42254 N/A
    95542 2n8m:A (-1.00) BS01 rna ? GO:0003676 ... O42254 N/A
    95543 2n8r:A (-1.00) BS01 ZN 3.4.24.65 GO:0004222 ... P39900 26887942
    95544 2n8r:A (-1.00) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 26887942
    95545 2n8r:A (-1.00) BS03 CA 3.4.24.65 GO:0004222 ... P39900 26887942
    95546 2n8r:A (-1.00) BS04 CA 3.4.24.65 GO:0004222 ... P39900 26887942
    95547 2n8r:A (-1.00) BS05 CA 3.4.24.65 GO:0004222 ... P39900 26887942
    95548 2n8r:D (-1.00) BS01 ZN N/A N/A N/A 26887942
    95549 2n8t:A (-1.00) BS01 peptide 2.3.2.26 N/A Q62940 26841867
    95550 2n8y:A (-1.00) BS01 CA ? GO:0005509 ... P12814 27272015
    95551 2n91:A (-1.00) BS01 HEM ? GO:0009055 ... Q8GGK7 27603556
    95552 2n91:A (-1.00) BS02 HEM ? GO:0009055 ... Q8GGK7 27603556
    95553 2n91:A (-1.00) BS03 HEM ? GO:0009055 ... Q8GGK7 27603556
    95554 2n94:A (-1.00) BS01 ZN ? N/A P38772 27139642
    95555 2n94:A (-1.00) BS02 ZN ? N/A P38772 27139642
    95556 2n95:A (-1.00) BS01 ZN ? N/A P46973 27139642
    95557 2n95:A (-1.00) BS02 ZN ? N/A P46973 27139642
    95558 2n9e:B (-1.00) BS01 peptide ? GO:0003723 ... P61956 26719330
    95559 2n9i:A (-1.00) BS01 HEC ? GO:0005515 ... P99999 26718409
    95560 2n9j:A (-1.00) BS01 HEC ? GO:0005515 ... P99999 26718409
    95561 2n9o:A (-1.00) BS01 ZN 2.3.2.27 GO:0061630 ... Q9BV68 27193484
    95562 2n9p:A (-1.00) BS01 ZN 2.3.2.27 GO:0061630 ... Q9BV68 27193484
    95563 2n9x:A (-1.00) BS01 peptide ? GO:0000045 ... Q9GZQ8 27653272
    95564 2na5:A (-1.00) BS01 CNC ? GO:0005179 ... P10082 27027248
    95565 2naa:A (-1.00) BS01 ZN 2.1.1.357 N/A O88491 26896805
    95566 2naa:A (-1.00) BS02 ZN 2.1.1.357 N/A O88491 26896805
    95567 2naa:A (-1.00) BS03 ZN 2.1.1.357 N/A O88491 26896805
    95568 2naa:A (-1.00) BS04 ZN 2.1.1.357 N/A O88491 26896805
    95569 2nab:A (-1.00) BS01 ZN ? N/A Q5SXI5 26896805
    95570 2nad:A (2.05) BS01 AZI 1.17.1.9 GO:0005737 ... P33160 8114093
    95571 2nad:A (2.05) BS02 NAD 1.17.1.9 GO:0005737 ... P33160 8114093 MOAD: Ki=0.1uM
    95572 2nad:B (2.05) BS01 AZI 1.17.1.9 GO:0005737 ... P33160 8114093
    95573 2nad:B (2.05) BS02 NAD 1.17.1.9 GO:0005737 ... P33160 8114093 MOAD: Ki=0.1uM
    95574 2nap:A (1.9) BS01 SF4 1.9.6.1 GO:0005506 ... P81186 10368307
    95575 2nap:A (1.9) BS02 MGD 1.9.6.1 GO:0005506 ... P81186 10368307
    95576 2nap:A (1.9) BS03 MGD 1.9.6.1 GO:0005506 ... P81186 10368307
    95577 2nax:A (-1.00) BS01 ZN ? GO:0000993 ... P39081 27780845
    95578 2nb9:A (-1.00) BS01 ZN ? N/A Q9A679 28008852
    95579 2nbj:A (-1.00) BS01 dna ? GO:0042262 ... P12770 N/A
    95580 2nbj:A (-1.00) BS02 dna ? GO:0042262 ... P12770 N/A
    95581 2nbq:A (-1.00) BS01 ZN 3.5.4.38 GO:0008270 ... Q9UH17 27163633
    95582 2nc3:A (-1.00) BS01 ALL N/A N/A N/A 27249581
    95583 2nc4:A (-1.00) BS01 GAL N/A N/A N/A 27249581
    95584 2nc5:A (-1.00) BS01 XYP N/A N/A N/A 27249581
    95585 2nc6:A (-1.00) BS01 4N2 N/A N/A N/A 27249581
    95586 2ncd:A (2.5) BS01 ADP 3.6.4.- GO:0003777 ... P20480 9796817
    95587 2nce:A (-1.00) BS01 CA 2.7.11.13 N/A P05696 N/A
    95588 2nce:A (-1.00) BS02 CA 2.7.11.13 N/A P05696 N/A
    95589 2ncz:A (-1.00) BS01 peptide ? N/A O60885 27291650
    95590 2nd0:A (-1.00) BS01 peptide ? N/A O60885 27291650
    95591 2nd1:A (-1.00) BS01 peptide ? N/A O60885 27291650
    95592 2ndf:A (-1.00) BS01 peptide ? N/A P42568 27545619
    95593 2ndg:A (-1.00) BS01 peptide ? N/A P42568 27545619
    95594 2ndo:A (-1.00) BS01 SFQ ? GO:0003756 ... P0AEG4 27778134
    95595 2ng1:A (2.02) BS01 GDP 3.6.5.4 GO:0003924 ... O07347 10426959
    95596 2ngr:A (1.9) BS01 MG 3.6.5.2 GO:0000139 ... P60953 9846874
    95597 2ngr:A (1.9) BS02 GDP 3.6.5.2 GO:0000139 ... P60953 9846874
    95598 2ngr:A (1.9) BS03 AF3 3.6.5.2 GO:0000139 ... P60953 9846874
    95599 2nip:A (2.2) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 9677296
    95600 2nip:B (2.2) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 9677296

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).