SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    956001 9dfc:27 (2.5) BS02 MG N/A GO:0003735 ... P80340 39372947
    956002 9dfc:28 (2.5) BS01 rna N/A GO:0003735 ... Q5SKU1 39372947
    956003 9dfc:29 (2.5) BS01 rna N/A GO:0003735 ... Q5SHR2 39372947
    956004 9dfc:29 (2.5) BS02 ZN N/A GO:0003735 ... Q5SHR2 39372947
    956005 9dfc:2D (2.5) BS01 rna N/A GO:0002181 ... P60405 39372947
    956006 9dfc:2D (2.5) BS02 rna N/A GO:0002181 ... P60405 39372947
    956007 9dfc:2D (2.5) BS03 MG N/A GO:0002181 ... P60405 39372947
    956008 9dfc:2D (2.5) BS04 MG N/A GO:0002181 ... P60405 39372947
    956009 9dfc:2D (2.5) BS05 MG N/A GO:0002181 ... P60405 39372947
    956010 9dfc:2D (2.5) BS06 MG N/A GO:0002181 ... P60405 39372947
    956011 9dfc:2D (2.5) BS07 MG N/A GO:0002181 ... P60405 39372947
    956012 9dfc:2E (2.5) BS01 rna N/A GO:0003735 ... Q5SHN8 39372947
    956013 9dfc:2E (2.5) BS02 MG N/A GO:0003735 ... Q5SHN8 39372947
    956014 9dfc:2F (2.5) BS01 rna N/A GO:0003735 ... Q5SHN9 39372947
    956015 9dfc:2F (2.5) BS02 MG N/A GO:0003735 ... Q5SHN9 39372947
    956016 9dfc:2F (2.5) BS03 MG N/A GO:0003735 ... Q5SHN9 39372947
    956017 9dfc:2F (2.5) BS04 MG N/A GO:0003735 ... Q5SHN9 39372947
    956018 9dfc:2F (2.5) BS05 MG N/A GO:0003735 ... Q5SHN9 39372947
    956019 9dfc:2G (2.5) BS01 rna N/A GO:0000049 ... Q5SHQ0 39372947
    956020 9dfc:2G (2.5) BS02 rna N/A GO:0000049 ... Q5SHQ0 39372947
    956021 9dfc:2G (2.5) BS03 rna N/A GO:0000049 ... Q5SHQ0 39372947
    956022 9dfc:2G (2.5) BS04 MG N/A GO:0000049 ... Q5SHQ0 39372947
    956023 9dfc:2H (2.5) BS01 rna N/A GO:0002181 ... P0DOY8 39372947
    956024 9dfc:2I (2.5) BS01 rna N/A GO:0003735 ... Q5SLQ1 39372947
    956025 9dfc:2N (2.5) BS01 rna N/A GO:0003729 ... P60488 39372947
    956026 9dfc:2O (2.5) BS01 rna N/A GO:0003735 ... Q5SHP8 39372947
    956027 9dfc:2O (2.5) BS02 rna N/A GO:0003735 ... Q5SHP8 39372947
    956028 9dfc:2P (2.5) BS01 rna N/A GO:0003735 ... Q5SHQ7 39372947
    956029 9dfc:2Q (2.5) BS01 rna N/A GO:0003735 ... P60489 39372947
    956030 9dfc:2Q (2.5) BS02 rna N/A GO:0003735 ... P60489 39372947
    956031 9dfc:2Q (2.5) BS03 rna N/A GO:0003735 ... P60489 39372947
    956032 9dfc:2Q (2.5) BS04 rna N/A GO:0003735 ... P60489 39372947
    956033 9dfc:2Q (2.5) BS05 MG N/A GO:0003735 ... P60489 39372947
    956034 9dfc:2Q (2.5) BS06 MG N/A GO:0003735 ... P60489 39372947
    956035 9dfc:2R (2.5) BS01 rna N/A GO:0003735 ... Q9Z9H5 39372947
    956036 9dfc:2S (2.5) BS01 rna N/A GO:0003735 ... Q5SHQ4 39372947
    956037 9dfc:2S (2.5) BS02 rna N/A GO:0003735 ... Q5SHQ4 39372947
    956038 9dfc:2T (2.5) BS01 rna N/A GO:0003735 ... P60490 39372947
    956039 9dfc:2T (2.5) BS02 rna N/A GO:0003735 ... P60490 39372947
    956040 9dfc:2T (2.5) BS03 MG N/A GO:0003735 ... P60490 39372947
    956041 9dfc:2U (2.5) BS01 rna N/A GO:0000027 ... P60491 39372947
    956042 9dfc:2U (2.5) BS02 MG N/A GO:0000027 ... P60491 39372947
    956043 9dfc:2V (2.5) BS01 rna N/A GO:0003723 ... P60492 39372947
    956044 9dfc:2V (2.5) BS02 MG N/A GO:0003723 ... P60492 39372947
    956045 9dfc:2W (2.5) BS01 rna N/A GO:0003735 ... Q5SHP3 39372947
    956046 9dfc:2W (2.5) BS02 MG N/A GO:0003735 ... Q5SHP3 39372947
    956047 9dfc:2W (2.5) BS03 MG N/A GO:0003735 ... Q5SHP3 39372947
    956048 9dfc:2X (2.5) BS01 rna N/A GO:0003735 ... Q5SHP0 39372947
    956049 9dfc:2X (2.5) BS02 MG N/A GO:0003735 ... Q5SHP0 39372947
    956050 9dfc:2Y (2.5) BS01 rna N/A GO:0003723 ... Q5SHP9 39372947
    956051 9dfc:2Y (2.5) BS02 ZN N/A GO:0003723 ... Q5SHP9 39372947
    956052 9dfc:2Z (2.5) BS01 rna N/A GO:0003723 ... Q5SHZ1 39372947
    956053 9dfc:2Z (2.5) BS02 rna N/A GO:0003723 ... Q5SHZ1 39372947
    956054 9dfc:2Z (2.5) BS03 MG N/A GO:0003723 ... Q5SHZ1 39372947
    956055 9dfc:2b (2.5) BS01 rna N/A GO:0003735 ... P80371 39372947
    956056 9dfc:2c (2.5) BS01 rna N/A GO:0003676 ... P80372 39372947
    956057 9dfc:2d (2.5) BS01 rna N/A GO:0003723 ... P80373 39372947
    956058 9dfc:2d (2.5) BS02 SF4 N/A GO:0003723 ... P80373 39372947
    956059 9dfc:2e (2.5) BS01 rna N/A GO:0003723 ... Q5SHQ5 39372947
    956060 9dfc:2e (2.5) BS02 MG N/A GO:0003723 ... Q5SHQ5 39372947
    956061 9dfc:2f (2.5) BS01 rna N/A GO:0003735 ... Q5SLP8 39372947
    956062 9dfc:2f (2.5) BS02 MG N/A GO:0003735 ... Q5SLP8 39372947
    956063 9dfc:2g (2.5) BS01 rna N/A GO:0000049 ... P17291 39372947
    956064 9dfc:2g (2.5) BS02 rna N/A GO:0000049 ... P17291 39372947
    956065 9dfc:2h (2.5) BS01 rna N/A GO:0003735 ... P0DOY9 39372947
    956066 9dfc:2i (2.5) BS01 rna N/A GO:0003723 ... P80374 39372947
    956067 9dfc:2j (2.5) BS01 rna N/A GO:0000049 ... Q5SHN7 39372947
    956068 9dfc:2k (2.5) BS01 rna N/A GO:0003735 ... P80376 39372947
    956069 9dfc:2k (2.5) BS02 MG N/A GO:0003735 ... P80376 39372947
    956070 9dfc:2l (2.5) BS01 rna N/A GO:0000049 ... Q5SHN3 39372947
    956071 9dfc:2l (2.5) BS02 MG N/A GO:0000049 ... Q5SHN3 39372947
    956072 9dfc:2m (2.5) BS01 rna N/A GO:0000049 ... P80377 39372947
    956073 9dfc:2m (2.5) BS02 rna N/A GO:0000049 ... P80377 39372947
    956074 9dfc:2m (2.5) BS03 rna N/A GO:0000049 ... P80377 39372947
    956075 9dfc:2n (2.5) BS01 rna N/A GO:0003735 ... P0DOY6 39372947
    956076 9dfc:2n (2.5) BS02 ZN N/A GO:0003735 ... P0DOY6 39372947
    956077 9dfc:2o (2.5) BS01 rna N/A GO:0003735 ... Q5SJ76 39372947
    956078 9dfc:2o (2.5) BS02 rna N/A GO:0003735 ... Q5SJ76 39372947
    956079 9dfc:2p (2.5) BS01 rna N/A GO:0003735 ... Q5SJH3 39372947
    956080 9dfc:2q (2.5) BS01 rna N/A GO:0003735 ... P0DOY7 39372947
    956081 9dfc:2q (2.5) BS02 MG N/A GO:0003735 ... P0DOY7 39372947
    956082 9dfc:2q (2.5) BS03 MG N/A GO:0003735 ... P0DOY7 39372947
    956083 9dfc:2r (2.5) BS01 rna N/A GO:0003735 ... Q5SLQ0 39372947
    956084 9dfc:2s (2.5) BS01 rna N/A GO:0000028 ... Q5SHP2 39372947
    956085 9dfc:2t (2.5) BS01 rna N/A GO:0003723 ... P80380 39372947
    956086 9dfc:2t (2.5) BS02 MG N/A GO:0003723 ... P80380 39372947
    956087 9dfd:10 (2.6) BS01 rna N/A GO:0003735 ... P60493 39372947
    956088 9dfd:10 (2.6) BS02 rna N/A GO:0003735 ... P60493 39372947
    956089 9dfd:10 (2.6) BS03 rna N/A GO:0003735 ... P60493 39372947
    956090 9dfd:10 (2.6) BS04 MG N/A GO:0003735 ... P60493 39372947
    956091 9dfd:11 (2.6) BS01 rna N/A GO:0003735 ... P60494 39372947
    956092 9dfd:11 (2.6) BS02 rna N/A GO:0003735 ... P60494 39372947
    956093 9dfd:11 (2.6) BS03 MG N/A GO:0003735 ... P60494 39372947
    956094 9dfd:12 (2.6) BS01 rna N/A GO:0003735 ... Q5SHP6 39372947
    956095 9dfd:12 (2.6) BS02 MG N/A GO:0003735 ... Q5SHP6 39372947
    956096 9dfd:13 (2.6) BS01 rna N/A GO:0003735 ... Q5SHQ6 39372947
    956097 9dfd:13 (2.6) BS02 rna N/A GO:0003735 ... Q5SHQ6 39372947
    956098 9dfd:13 (2.6) BS03 MG N/A GO:0003735 ... Q5SHQ6 39372947
    956099 9dfd:13 (2.6) BS04 MG N/A GO:0003735 ... Q5SHQ6 39372947
    956100 9dfd:14 (2.6) BS01 rna N/A GO:0003735 ... Q5SJE1 39372947
    956101 9dfd:14 (2.6) BS02 ZN N/A GO:0003735 ... Q5SJE1 39372947
    956102 9dfd:15 (2.6) BS01 rna N/A GO:0003735 ... P80339 39372947
    956103 9dfd:15 (2.6) BS02 MG N/A GO:0003735 ... P80339 39372947
    956104 9dfd:15 (2.6) BS03 MG N/A GO:0003735 ... P80339 39372947
    956105 9dfd:15 (2.6) BS04 ZN N/A GO:0003735 ... P80339 39372947
    956106 9dfd:16 (2.6) BS01 rna N/A GO:0003735 ... P35871 39372947
    956107 9dfd:16 (2.6) BS02 MG N/A GO:0003735 ... P35871 39372947
    956108 9dfd:16 (2.6) BS03 ZN N/A GO:0003735 ... P35871 39372947
    956109 9dfd:17 (2.6) BS01 rna N/A GO:0003735 ... P80340 39372947
    956110 9dfd:17 (2.6) BS02 MG N/A GO:0003735 ... P80340 39372947
    956111 9dfd:18 (2.6) BS01 rna N/A GO:0003735 ... Q5SKU1 39372947
    956112 9dfd:18 (2.6) BS02 MG N/A GO:0003735 ... Q5SKU1 39372947
    956113 9dfd:18 (2.6) BS03 MG N/A GO:0003735 ... Q5SKU1 39372947
    956114 9dfd:18 (2.6) BS04 MG N/A GO:0003735 ... Q5SKU1 39372947
    956115 9dfd:19 (2.6) BS01 rna N/A GO:0003735 ... Q5SHR2 39372947
    956116 9dfd:19 (2.6) BS02 ZN N/A GO:0003735 ... Q5SHR2 39372947
    956117 9dfd:1D (2.6) BS01 rna N/A GO:0002181 ... P60405 39372947
    956118 9dfd:1D (2.6) BS02 rna N/A GO:0002181 ... P60405 39372947
    956119 9dfd:1D (2.6) BS03 MG N/A GO:0002181 ... P60405 39372947
    956120 9dfd:1D (2.6) BS04 MG N/A GO:0002181 ... P60405 39372947
    956121 9dfd:1D (2.6) BS05 MG N/A GO:0002181 ... P60405 39372947
    956122 9dfd:1D (2.6) BS06 MG N/A GO:0002181 ... P60405 39372947
    956123 9dfd:1D (2.6) BS07 MG N/A GO:0002181 ... P60405 39372947
    956124 9dfd:1D (2.6) BS08 MG N/A GO:0002181 ... P60405 39372947
    956125 9dfd:1D (2.6) BS09 MG N/A GO:0002181 ... P60405 39372947
    956126 9dfd:1D (2.6) BS10 MG N/A GO:0002181 ... P60405 39372947
    956127 9dfd:1D (2.6) BS11 MG N/A GO:0002181 ... P60405 39372947
    956128 9dfd:1D (2.6) BS12 MG N/A GO:0002181 ... P60405 39372947
    956129 9dfd:1D (2.6) BS13 MG N/A GO:0002181 ... P60405 39372947
    956130 9dfd:1E (2.6) BS01 rna N/A GO:0003735 ... Q5SHN8 39372947
    956131 9dfd:1E (2.6) BS02 MG N/A GO:0003735 ... Q5SHN8 39372947
    956132 9dfd:1E (2.6) BS03 MG N/A GO:0003735 ... Q5SHN8 39372947
    956133 9dfd:1E (2.6) BS04 MG N/A GO:0003735 ... Q5SHN8 39372947
    956134 9dfd:1E (2.6) BS05 MG N/A GO:0003735 ... Q5SHN8 39372947
    956135 9dfd:1E (2.6) BS06 MG N/A GO:0003735 ... Q5SHN8 39372947
    956136 9dfd:1E (2.6) BS07 MG N/A GO:0003735 ... Q5SHN8 39372947
    956137 9dfd:1F (2.6) BS01 rna N/A GO:0003735 ... Q5SHN9 39372947
    956138 9dfd:1F (2.6) BS02 MG N/A GO:0003735 ... Q5SHN9 39372947
    956139 9dfd:1F (2.6) BS03 MG N/A GO:0003735 ... Q5SHN9 39372947
    956140 9dfd:1F (2.6) BS04 MG N/A GO:0003735 ... Q5SHN9 39372947
    956141 9dfd:1F (2.6) BS05 MG N/A GO:0003735 ... Q5SHN9 39372947
    956142 9dfd:1F (2.6) BS06 MG N/A GO:0003735 ... Q5SHN9 39372947
    956143 9dfd:1F (2.6) BS07 MG N/A GO:0003735 ... Q5SHN9 39372947
    956144 9dfd:1F (2.6) BS08 MG N/A GO:0003735 ... Q5SHN9 39372947
    956145 9dfd:1F (2.6) BS09 MG N/A GO:0003735 ... Q5SHN9 39372947
    956146 9dfd:1F (2.6) BS10 MG N/A GO:0003735 ... Q5SHN9 39372947
    956147 9dfd:1F (2.6) BS11 MG N/A GO:0003735 ... Q5SHN9 39372947
    956148 9dfd:1G (2.6) BS01 rna N/A GO:0000049 ... Q5SHQ0 39372947
    956149 9dfd:1G (2.6) BS02 rna N/A GO:0000049 ... Q5SHQ0 39372947
    956150 9dfd:1G (2.6) BS03 rna N/A GO:0000049 ... Q5SHQ0 39372947
    956151 9dfd:1G (2.6) BS04 MG N/A GO:0000049 ... Q5SHQ0 39372947
    956152 9dfd:1H (2.6) BS01 rna N/A GO:0002181 ... P0DOY8 39372947
    956153 9dfd:1I (2.6) BS01 rna N/A GO:0003735 ... Q5SLQ1 39372947
    956154 9dfd:1I (2.6) BS02 MG N/A GO:0003735 ... Q5SLQ1 39372947
    956155 9dfd:1N (2.6) BS01 rna N/A GO:0003729 ... P60488 39372947
    956156 9dfd:1N (2.6) BS02 MG N/A GO:0003729 ... P60488 39372947
    956157 9dfd:1N (2.6) BS03 MG N/A GO:0003729 ... P60488 39372947
    956158 9dfd:1N (2.6) BS04 MG N/A GO:0003729 ... P60488 39372947
    956159 9dfd:1O (2.6) BS01 rna N/A GO:0003735 ... Q5SHP8 39372947
    956160 9dfd:1O (2.6) BS02 rna N/A GO:0003735 ... Q5SHP8 39372947
    956161 9dfd:1O (2.6) BS03 MG N/A GO:0003735 ... Q5SHP8 39372947
    956162 9dfd:1O (2.6) BS04 MG N/A GO:0003735 ... Q5SHP8 39372947
    956163 9dfd:1P (2.6) BS01 rna N/A GO:0003735 ... Q5SHQ7 39372947
    956164 9dfd:1P (2.6) BS02 MG N/A GO:0003735 ... Q5SHQ7 39372947
    956165 9dfd:1P (2.6) BS03 MG N/A GO:0003735 ... Q5SHQ7 39372947
    956166 9dfd:1P (2.6) BS04 MG N/A GO:0003735 ... Q5SHQ7 39372947
    956167 9dfd:1P (2.6) BS05 MG N/A GO:0003735 ... Q5SHQ7 39372947
    956168 9dfd:1P (2.6) BS06 MG N/A GO:0003735 ... Q5SHQ7 39372947
    956169 9dfd:1Q (2.6) BS01 rna N/A GO:0003735 ... P60489 39372947
    956170 9dfd:1Q (2.6) BS02 rna N/A GO:0003735 ... P60489 39372947
    956171 9dfd:1Q (2.6) BS03 rna N/A GO:0003735 ... P60489 39372947
    956172 9dfd:1Q (2.6) BS04 rna N/A GO:0003735 ... P60489 39372947
    956173 9dfd:1Q (2.6) BS05 MG N/A GO:0003735 ... P60489 39372947
    956174 9dfd:1Q (2.6) BS06 MG N/A GO:0003735 ... P60489 39372947
    956175 9dfd:1Q (2.6) BS07 MG N/A GO:0003735 ... P60489 39372947
    956176 9dfd:1Q (2.6) BS08 MG N/A GO:0003735 ... P60489 39372947
    956177 9dfd:1Q (2.6) BS09 MG N/A GO:0003735 ... P60489 39372947
    956178 9dfd:1R (2.6) BS01 rna N/A GO:0003735 ... Q9Z9H5 39372947
    956179 9dfd:1R (2.6) BS02 MG N/A GO:0003735 ... Q9Z9H5 39372947
    956180 9dfd:1R (2.6) BS03 MG N/A GO:0003735 ... Q9Z9H5 39372947
    956181 9dfd:1S (2.6) BS01 rna N/A GO:0003735 ... Q5SHQ4 39372947
    956182 9dfd:1S (2.6) BS02 rna N/A GO:0003735 ... Q5SHQ4 39372947
    956183 9dfd:1S (2.6) BS03 MG N/A GO:0003735 ... Q5SHQ4 39372947
    956184 9dfd:1S (2.6) BS04 MG N/A GO:0003735 ... Q5SHQ4 39372947
    956185 9dfd:1T (2.6) BS01 rna N/A GO:0003735 ... P60490 39372947
    956186 9dfd:1T (2.6) BS02 rna N/A GO:0003735 ... P60490 39372947
    956187 9dfd:1U (2.6) BS01 rna N/A GO:0000027 ... P60491 39372947
    956188 9dfd:1U (2.6) BS02 MG N/A GO:0000027 ... P60491 39372947
    956189 9dfd:1U (2.6) BS03 MG N/A GO:0000027 ... P60491 39372947
    956190 9dfd:1U (2.6) BS04 MG N/A GO:0000027 ... P60491 39372947
    956191 9dfd:1U (2.6) BS05 MG N/A GO:0000027 ... P60491 39372947
    956192 9dfd:1U (2.6) BS06 MG N/A GO:0000027 ... P60491 39372947
    956193 9dfd:1U (2.6) BS07 MG N/A GO:0000027 ... P60491 39372947
    956194 9dfd:1U (2.6) BS08 MG N/A GO:0000027 ... P60491 39372947
    956195 9dfd:1U (2.6) BS09 MG N/A GO:0000027 ... P60491 39372947
    956196 9dfd:1V (2.6) BS01 rna N/A GO:0003723 ... P60492 39372947
    956197 9dfd:1V (2.6) BS02 MG N/A GO:0003723 ... P60492 39372947
    956198 9dfd:1V (2.6) BS03 MG N/A GO:0003723 ... P60492 39372947
    956199 9dfd:1V (2.6) BS04 MG N/A GO:0003723 ... P60492 39372947
    956200 9dfd:1V (2.6) BS05 MG N/A GO:0003723 ... P60492 39372947

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).