SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    957601 9doi:A (2.3) BS02 ZN N/A GO:0006508 ... P0DTD1 39948104
    957602 9doi:A (2.3) BS03 ZN N/A GO:0006508 ... P0DTD1 39948104
    957603 9doi:A (2.3) BS04 ZN N/A GO:0006508 ... P0DTD1 39948104
    957604 9doj:A (1.48) BS01 MN N/A GO:0003723 ... A0A646SQW7 39745425
    957605 9doj:A (1.48) BS02 MN N/A GO:0003723 ... A0A646SQW7 39745425
    957606 9doj:A (1.48) BS03 A1A8U N/A GO:0003723 ... A0A646SQW7 39745425
    957607 9doj:B (1.48) BS01 MN N/A GO:0003723 ... A0A646SQW7 39745425
    957608 9doj:B (1.48) BS02 MN N/A GO:0003723 ... A0A646SQW7 39745425
    957609 9doj:B (1.48) BS03 A1A8U N/A GO:0003723 ... A0A646SQW7 39745425
    957610 9dol:A (1.77) BS01 CA N/A GO:0000791 ... Q9Y2J8 40379660
    957611 9dol:A (1.77) BS02 CA N/A GO:0000791 ... Q9Y2J8 40379660
    957612 9dol:A (1.77) BS03 CA N/A GO:0000791 ... Q9Y2J8 40379660
    957613 9dol:A (1.77) BS04 CA N/A GO:0000791 ... Q9Y2J8 40379660
    957614 9dol:A (1.77) BS05 A1A8O N/A GO:0000791 ... Q9Y2J8 40379660
    957615 9dom:A (1.69) BS01 peptide N/A N/A Q96SW2 40312344
    957616 9dom:A (1.69) BS02 A1A8N N/A N/A Q96SW2 40312344
    957617 9dom:A (1.69) BS03 ZN N/A N/A Q96SW2 40312344
    957618 9dom:C (1.69) BS01 peptide N/A N/A Q96SW2 40312344
    957619 9dom:C (1.69) BS02 A1A8N N/A N/A Q96SW2 40312344
    957620 9dom:C (1.69) BS03 ZN N/A N/A Q96SW2 40312344
    957621 9dom:E (1.69) BS01 peptide N/A N/A Q96SW2 40312344
    957622 9dom:E (1.69) BS02 peptide N/A N/A Q96SW2 40312344
    957623 9dom:E (1.69) BS03 A1A8N N/A N/A Q96SW2 40312344
    957624 9dom:E (1.69) BS04 ZN N/A N/A Q96SW2 40312344
    957625 9dom:G (1.69) BS01 peptide N/A N/A Q96SW2 40312344
    957626 9dom:G (1.69) BS02 A1A8N N/A N/A Q96SW2 40312344
    957627 9dom:G (1.69) BS03 ZN N/A N/A Q96SW2 40312344
    957628 9don:A (2.091) BS01 M7G N/A GO:0003723 ... P06730 39811141
    957629 9don:B (2.091) BS01 A1A8P N/A GO:0003723 ... P06730 39811141
    957630 9dop:A (2.44) BS01 CA N/A GO:0004668 ... Q9UM07 40379660
    957631 9dop:A (2.44) BS02 A1BZK N/A GO:0004668 ... Q9UM07 40379660
    957632 9dos:A (2.33) BS01 A1A8V N/A GO:0009058 ... N/A N/A
    957633 9dos:B (2.33) BS01 A1A8V N/A GO:0009058 ... N/A N/A
    957634 9dos:B (2.33) BS02 A1A8V N/A GO:0009058 ... N/A N/A
    957635 9dos:C (2.33) BS01 A1A8V N/A GO:0009058 ... N/A N/A
    957636 9dos:C (2.33) BS02 A1A8V N/A GO:0009058 ... N/A N/A
    957637 9dos:D (2.33) BS01 A1A8V N/A GO:0009058 ... N/A N/A
    957638 9dou:A (3.2) BS01 dna N/A N/A A0A803VHT8 40603868
    957639 9dou:A (3.2) BS02 dna N/A N/A A0A803VHT8 40603868
    957640 9dou:A (3.2) BS03 rna N/A N/A A0A803VHT8 40603868
    957641 9dou:A (3.2) BS04 dna N/A N/A A0A803VHT8 40603868
    957642 9dou:A (3.2) BS05 MG N/A N/A A0A803VHT8 40603868
    957643 9dou:A (3.2) BS06 TTP N/A N/A A0A803VHT8 40603868
    957644 9dou:A (3.2) BS07 ZN N/A N/A A0A803VHT8 40603868
    957645 9dou:A (3.2) BS08 ZN N/A N/A A0A803VHT8 40603868
    957646 9dou:A (3.2) BS09 ZN N/A N/A A0A803VHT8 40603868
    957647 9dou:A (3.2) BS10 ZN N/A N/A A0A803VHT8 40603868
    957648 9dow:A (3.1) BS01 rna N/A GO:0000049 ... Q15046 40036503
    957649 9dow:A (3.1) BS02 LYS N/A GO:0000049 ... Q15046 40036503
    957650 9dow:A (3.1) BS03 AMP N/A GO:0000049 ... Q15046 40036503
    957651 9dow:B (3.1) BS01 LYS N/A GO:0000049 ... Q15046 40036503
    957652 9dow:B (3.1) BS02 AMP N/A GO:0000049 ... Q15046 40036503
    957653 9doz:A (1.454) BS01 CA N/A N/A Q99972 40095382
    957654 9dp1:A (2.29) BS01 dna N/A GO:0003677 ... P27695 40902980
    957655 9dp1:A (2.29) BS02 dna N/A GO:0003677 ... P27695 40902980
    957656 9dp2:A (1.99) BS01 dna N/A GO:0003677 ... P27695 40902980
    957657 9dp2:A (1.99) BS02 dna N/A GO:0003677 ... P27695 40902980
    957658 9dp2:A (1.99) BS03 dna N/A GO:0003677 ... P27695 40902980
    957659 9dp3:A (2.1) BS01 dna N/A GO:0003677 ... P27695 40902980
    957660 9dp3:A (2.1) BS02 dna N/A GO:0003677 ... P27695 40902980
    957661 9dp3:A (2.1) BS03 dna N/A GO:0003677 ... P27695 40902980
    957662 9dp4:A (2.25) BS01 dna N/A GO:0003677 ... P27695 40902980
    957663 9dp4:A (2.25) BS02 dna N/A GO:0003677 ... P27695 40902980
    957664 9dp4:A (2.25) BS03 dna N/A GO:0003677 ... P27695 40902980
    957665 9dp4:B (2.25) BS01 dna N/A GO:0003677 ... P27695 40902980
    957666 9dp4:B (2.25) BS02 dna N/A GO:0003677 ... P27695 40902980
    957667 9dp4:B (2.25) BS03 MG N/A GO:0003677 ... P27695 40902980
    957668 9dp5:A (1.998) BS01 ZN N/A GO:0003723 ... T2M593 39986343
    957669 9dp5:A (1.998) BS02 IHP N/A GO:0003723 ... T2M593 39986343
    957670 9dp5:B (1.998) BS01 ZN N/A GO:0003723 ... T2M593 39986343
    957671 9dp5:B (1.998) BS02 IHP N/A GO:0003723 ... T2M593 39986343
    957672 9dpa:A (3.0) BS01 rna N/A GO:0000049 ... Q15046 40036503
    957673 9dpa:A (3.0) BS02 AMP N/A GO:0000049 ... Q15046 40036503
    957674 9dpa:A (3.0) BS03 LYS N/A GO:0000049 ... Q15046 40036503
    957675 9dpa:B (3.0) BS01 LYS N/A GO:0000049 ... Q15046 40036503
    957676 9dpa:B (3.0) BS02 AMP N/A GO:0000049 ... Q15046 40036503
    957677 9dpb:A (2.9) BS01 rna N/A GO:0000049 ... Q15046 40036503
    957678 9dpb:A (2.9) BS02 LYS N/A GO:0000049 ... Q15046 40036503
    957679 9dpb:A (2.9) BS03 APC N/A GO:0000049 ... Q15046 40036503
    957680 9dpb:B (2.9) BS01 LYS N/A GO:0000049 ... Q15046 40036503
    957681 9dpb:B (2.9) BS02 APC N/A GO:0000049 ... Q15046 40036503
    957682 9dpd:C (3.87) BS01 AR6 N/A N/A Q8IXJ6 N/A
    957683 9dpf:A (1.9) BS01 peptide N/A GO:0004252 ... O60235 40348740
    957684 9dpf:C (1.9) BS01 peptide N/A GO:0004252 ... O60235 40348740
    957685 9dpi:C (3.9) BS01 AR6 N/A N/A Q8IXJ6 N/A
    957686 9dpi:E (3.9) BS01 AR6 N/A N/A Q8IXJ6 N/A
    957687 9dpl:A (2.8) BS01 rna N/A GO:0000049 ... Q15046 40036503
    957688 9dpl:A (2.8) BS02 peptide N/A GO:0000049 ... Q15046 40036503
    957689 9dpl:A (2.8) BS03 peptide N/A GO:0000049 ... Q15046 40036503
    957690 9dpl:A (2.8) BS04 LYS N/A GO:0000049 ... Q15046 40036503
    957691 9dpl:A (2.8) BS05 AMP N/A GO:0000049 ... Q15046 40036503
    957692 9dpl:B (2.8) BS01 peptide N/A GO:0000049 ... Q15046 40036503
    957693 9dpl:B (2.8) BS02 peptide N/A GO:0000049 ... Q15046 40036503
    957694 9dpl:B (2.8) BS03 LYS N/A GO:0000049 ... Q15046 40036503
    957695 9dpl:B (2.8) BS04 AMP N/A GO:0000049 ... Q15046 40036503
    957696 9dpm:A (1.9) BS01 CYS N/A GO:0005576 ... Q9UK05 39793884
    957697 9dpz:A (2.41) BS01 A1A9P N/A GO:0004668 ... Q9UM07 40379660
    957698 9dpz:A (2.41) BS02 3YZ N/A GO:0004668 ... Q9UM07 40379660
    957699 9dq0:A (2.0) BS01 MG N/A GO:0051213 ... A0ACD6B8T9 39901767
    957700 9dq0:B (2.0) BS01 MG N/A GO:0051213 ... A0ACD6B8T9 39901767
    957701 9dq0:B (2.0) BS02 MG N/A GO:0051213 ... A0ACD6B8T9 39901767
    957702 9dq0:B (2.0) BS03 MG N/A GO:0051213 ... A0ACD6B8T9 39901767
    957703 9dq1:A (1.9) BS01 MN N/A GO:0051213 ... A0ACD6B8T9 39901767
    957704 9dq1:A (1.9) BS02 AKG N/A GO:0051213 ... A0ACD6B8T9 39901767
    957705 9dq1:A (1.9) BS03 6HN N/A GO:0051213 ... A0ACD6B8T9 39901767
    957706 9dq1:A (1.9) BS04 6HN N/A GO:0051213 ... A0ACD6B8T9 39901767
    957707 9dq1:B (1.9) BS01 MN N/A GO:0051213 ... A0ACD6B8T9 39901767
    957708 9dq1:B (1.9) BS02 AKG N/A GO:0051213 ... A0ACD6B8T9 39901767
    957709 9dq1:B (1.9) BS03 6HN N/A GO:0051213 ... A0ACD6B8T9 39901767
    957710 9dq2:A (1.55) BS01 6HN N/A GO:0051213 ... A0ACD6B8T9 39901767
    957711 9dq2:A (1.55) BS02 VVO N/A GO:0051213 ... A0ACD6B8T9 39901767
    957712 9dq2:B (1.55) BS01 6HN N/A GO:0051213 ... A0ACD6B8T9 39901767
    957713 9dq2:B (1.55) BS02 VVO N/A GO:0051213 ... A0ACD6B8T9 39901767
    957714 9dq7:A (2.11) BS01 6V0 N/A GO:0003824 ... O51114 40111021
    957715 9dq7:A (2.11) BS02 FBP N/A GO:0003824 ... O51114 40111021
    957716 9dq7:B (2.11) BS01 FBP N/A GO:0003824 ... O51114 40111021
    957717 9dq7:B (2.11) BS02 6V0 N/A GO:0003824 ... O51114 40111021
    957718 9dq7:C (2.11) BS01 FBP N/A GO:0003824 ... O51114 40111021
    957719 9dq7:C (2.11) BS02 6V0 N/A GO:0003824 ... O51114 40111021
    957720 9dq7:C (2.11) BS03 CA N/A GO:0003824 ... O51114 40111021
    957721 9dq7:P (2.11) BS01 6V0 N/A GO:0003824 ... O51114 40111021
    957722 9dq7:P (2.11) BS02 CA N/A GO:0003824 ... O51114 40111021
    957723 9dq7:P (2.11) BS03 FBP N/A GO:0003824 ... O51114 40111021
    957724 9dq9:A (2.1) BS01 6V0 N/A GO:0003824 ... O51114 N/A
    957725 9dq9:A (2.1) BS02 CA N/A GO:0003824 ... O51114 N/A
    957726 9dq9:B (2.1) BS01 NAD N/A GO:0003824 ... O51114 N/A
    957727 9dq9:B (2.1) BS02 CA N/A GO:0003824 ... O51114 N/A
    957728 9dq9:C (2.1) BS01 NAD N/A GO:0003824 ... O51114 N/A
    957729 9dq9:C (2.1) BS02 CA N/A GO:0003824 ... O51114 N/A
    957730 9dq9:P (2.1) BS01 6V0 N/A GO:0003824 ... O51114 N/A
    957731 9dq9:P (2.1) BS02 CA N/A GO:0003824 ... O51114 N/A
    957732 9dqa:A (2.1) BS01 FE2 N/A GO:0001523 ... Q28175 40764714
    957733 9dqa:A (2.1) BS02 A1BEO N/A GO:0001523 ... Q28175 40764714
    957734 9dqa:B (2.1) BS01 FE2 N/A GO:0001523 ... Q28175 40764714
    957735 9dqa:B (2.1) BS02 A1BEO N/A GO:0001523 ... Q28175 40764714
    957736 9dqb:B (3.6) BS01 AMP N/A GO:0008641 ... Q9UBT2 40999065
    957737 9dqb:B (3.6) BS02 ZN N/A GO:0008641 ... Q9UBT2 40999065
    957738 9dqc:A (1.42) BS01 FUC N/A N/A A0A4D6I9J0 39513720
    957739 9dqc:B (1.42) BS01 FUC N/A N/A A0A4D6I9J0 39513720
    957740 9dqd:A (3.0) BS01 ZN N/A GO:0005515 ... Q96SW2 39811117
    957741 9dqd:A (3.0) BS02 A1BEP N/A GO:0005515 ... Q96SW2 39811117
    957742 9dqf:A (1.9) BS01 ACO N/A GO:0000287 ... Q2G0S3 40143772
    957743 9dqh:A (2.92) BS01 A1BE2 N/A GO:0002033 ... Q8TDS7 39580805
    957744 9dqi:A (2.39) BS01 TPP N/A GO:0000287 ... P9WK11 39945237
    957745 9dqi:C (2.39) BS01 TPP N/A GO:0000287 ... P9WK11 39945237
    957746 9dqi:C (2.39) BS02 DNA N/A GO:0000287 ... P9WK11 39945237
    957747 9dqi:C (2.39) BS03 MG N/A GO:0000287 ... P9WK11 39945237
    957748 9dqi:D (2.39) BS01 TPP N/A GO:0000287 ... P9WK11 39945237
    957749 9dqi:D (2.39) BS02 DNA N/A GO:0000287 ... P9WK11 39945237
    957750 9dqi:D (2.39) BS03 MG N/A GO:0000287 ... P9WK11 39945237
    957751 9dqj:A (2.9) BS01 A1BEQ N/A GO:0002033 ... Q8TDS7 39580805
    957752 9dql:A (3.2) BS01 BO2 N/A GO:0004175 ... Q16740 40232800
    957753 9dql:B (3.2) BS01 BO2 N/A GO:0004175 ... Q16740 40232800
    957754 9dql:C (3.2) BS01 BO2 N/A GO:0004175 ... Q16740 40232800
    957755 9dql:D (3.2) BS01 BO2 N/A GO:0004175 ... Q16740 40232800
    957756 9dql:E (3.2) BS01 BO2 N/A GO:0004175 ... Q16740 40232800
    957757 9dql:F (3.2) BS01 BO2 N/A GO:0004175 ... Q16740 40232800
    957758 9dql:G (3.2) BS01 BO2 N/A GO:0004175 ... Q16740 40232800
    957759 9dql:H (3.2) BS01 BO2 N/A GO:0004175 ... Q16740 40232800
    957760 9dql:I (3.2) BS01 BO2 N/A GO:0004175 ... Q16740 40232800
    957761 9dql:J (3.2) BS01 BO2 N/A GO:0004175 ... Q16740 40232800
    957762 9dql:K (3.2) BS01 BO2 N/A GO:0004175 ... Q16740 40232800
    957763 9dql:L (3.2) BS01 BO2 N/A GO:0004175 ... Q16740 40232800
    957764 9dql:M (3.2) BS01 BO2 N/A GO:0004175 ... Q16740 40232800
    957765 9dql:N (3.2) BS01 BO2 N/A GO:0004175 ... Q16740 40232800
    957766 9dqm:A (2.2) BS01 AMP N/A GO:0003872 ... O61068 N/A
    957767 9dqm:A (2.2) BS02 AMP N/A GO:0003872 ... O61068 N/A
    957768 9dqm:B (2.2) BS01 AMP N/A GO:0003872 ... O61068 N/A
    957769 9dqm:B (2.2) BS02 AMP N/A GO:0003872 ... O61068 N/A
    957770 9dqn:A (2.99) BS01 dna N/A GO:0003677 ... A0A0H2ZPE9 N/A
    957771 9dqn:A (2.99) BS02 dna N/A GO:0003677 ... A0A0H2ZPE9 N/A
    957772 9dqn:B (2.99) BS01 dna N/A GO:0003677 ... A0A0H2ZPE9 N/A
    957773 9dqn:B (2.99) BS02 dna N/A GO:0003677 ... A0A0H2ZPE9 N/A
    957774 9dqn:C (2.99) BS01 dna N/A GO:0003677 ... A0A0H2ZPE9 N/A
    957775 9dqn:C (2.99) BS02 dna N/A GO:0003677 ... A0A0H2ZPE9 N/A
    957776 9dqn:D (2.99) BS01 dna N/A GO:0003677 ... A0A0H2ZPE9 N/A
    957777 9dqn:D (2.99) BS02 dna N/A GO:0003677 ... A0A0H2ZPE9 N/A
    957778 9dqq:A (2.45) BS01 AKG N/A GO:0051213 ... A0ACD6BAI6 39901767
    957779 9dqq:A (2.45) BS02 FE N/A GO:0051213 ... A0ACD6BAI6 39901767
    957780 9dqq:A (2.45) BS03 FE N/A GO:0051213 ... A0ACD6BAI6 39901767
    957781 9dqq:B (2.45) BS01 AKG N/A GO:0051213 ... A0ACD6BAI6 39901767
    957782 9dqq:B (2.45) BS02 FE N/A GO:0051213 ... A0ACD6BAI6 39901767
    957783 9dqr:A (2.0) BS01 VVO N/A GO:0051213 ... A0ACD6BAI6 39901767
    957784 9dqr:B (2.0) BS01 VVO N/A GO:0051213 ... A0ACD6BAI6 39901767
    957785 9dqt:A (3.19) BS01 dna N/A GO:0003684 ... Q9UNA4 40593703
    957786 9dqt:A (3.19) BS02 CA N/A GO:0003684 ... Q9UNA4 40593703
    957787 9dqt:A (3.19) BS03 CA N/A GO:0003684 ... Q9UNA4 40593703
    957788 9dqu:A (2.2) BS01 dna N/A GO:0003684 ... Q9UNA4 40593703
    957789 9dqu:A (2.2) BS02 POP N/A GO:0003684 ... Q9UNA4 40593703
    957790 9dqu:A (2.2) BS03 MG N/A GO:0003684 ... Q9UNA4 40593703
    957791 9dqu:A (2.2) BS04 MG N/A GO:0003684 ... Q9UNA4 40593703
    957792 9dqu:A (2.2) BS05 MG N/A GO:0003684 ... Q9UNA4 40593703
    957793 9dqw:A (1.45) BS01 UMA N/A GO:0005515 ... P14900 N/A
    957794 9dqw:A (1.45) BS02 ANP N/A GO:0005515 ... P14900 N/A
    957795 9dqz:M (2.9) BS01 CA N/A N/A P98155 N/A
    957796 9dqz:M (2.9) BS02 CA N/A N/A P98155 N/A
    957797 9dqz:N (2.9) BS01 CA N/A N/A P98155 N/A
    957798 9dqz:N (2.9) BS02 CA N/A N/A P98155 N/A
    957799 9dqz:O (2.9) BS01 CA N/A N/A P98155 N/A
    957800 9dqz:O (2.9) BS02 CA N/A N/A P98155 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).