SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    958201 9dty:l (3.19) BS01 A1BB4 N/A N/A P40337 40991405
    958202 9dtz:A (2.2) BS01 A1BCZ N/A GO:0008233 ... P0DTD1 40655098
    958203 9dtz:B (2.2) BS01 A1BCZ N/A GO:0008233 ... P0DTD1 40655098
    958204 9du0:A (3.0) BS01 A1BB5 N/A GO:0006338 ... P51531 40991405
    958205 9du0:B (3.0) BS01 A1BB5 N/A GO:0006338 ... P51531 40991405
    958206 9du1:B (2.01) BS01 A1BB8 N/A GO:0003007 ... P62942 N/A
    958207 9du1:D (2.01) BS01 A1BB8 N/A GO:0003007 ... P62942 N/A
    958208 9du1:E (2.01) BS01 A1BB8 N/A N/A Q9H8M2 N/A
    958209 9du1:F (2.01) BS01 A1BB8 N/A N/A Q9H8M2 N/A
    958210 9du1:G (2.01) BS01 A1BB8 N/A N/A Q9H8M2 N/A
    958211 9du1:H (2.01) BS01 A1BB8 N/A N/A Q9H8M2 N/A
    958212 9du2:A (1.86) BS01 A1BCY N/A GO:0008233 ... P0DTD1 40655098
    958213 9du2:B (1.86) BS01 A1BCY N/A GO:0008233 ... P0DTD1 40655098
    958214 9du3:A (2.07) BS01 A1BCX N/A GO:0008233 ... P0DTD1 40655098
    958215 9du4:A (2.42) BS01 A1BCW N/A GO:0008233 ... P0DTD1 40655098
    958216 9du4:B (2.42) BS01 A1BCW N/A GO:0008233 ... P0DTD1 40655098
    958217 9du6:A (1.55) BS01 ATP N/A GO:0005829 ... B5XU49 N/A
    958218 9du6:B (1.55) BS01 ATP N/A GO:0005829 ... B5XU49 N/A
    958219 9du7:A (1.867) BS01 A1BCT N/A N/A Q14145 N/A
    958220 9du7:B (1.867) BS01 A1BCT N/A N/A Q14145 N/A
    958221 9du8:A (1.35) BS01 MG N/A GO:0005829 ... B5XU49 N/A
    958222 9du8:A (1.35) BS02 MG N/A GO:0005829 ... B5XU49 N/A
    958223 9du8:A (1.35) BS03 ADP N/A GO:0005829 ... B5XU49 N/A
    958224 9du8:A (1.35) BS04 ADP N/A GO:0005829 ... B5XU49 N/A
    958225 9du8:B (1.35) BS01 ADP N/A GO:0005829 ... B5XU49 N/A
    958226 9du8:B (1.35) BS02 MG N/A GO:0005829 ... B5XU49 N/A
    958227 9du8:B (1.35) BS03 MG N/A GO:0005829 ... B5XU49 N/A
    958228 9du8:B (1.35) BS04 ADP N/A GO:0005829 ... B5XU49 N/A
    958229 9du9:A (1.35) BS01 GDP N/A GO:0005829 ... B5XU49 N/A
    958230 9du9:A (1.35) BS02 MG N/A GO:0005829 ... B5XU49 N/A
    958231 9du9:A (1.35) BS03 MG N/A GO:0005829 ... B5XU49 N/A
    958232 9du9:A (1.35) BS04 GDP N/A GO:0005829 ... B5XU49 N/A
    958233 9du9:B (1.35) BS01 GDP N/A GO:0005829 ... B5XU49 N/A
    958234 9du9:B (1.35) BS02 MG N/A GO:0005829 ... B5XU49 N/A
    958235 9du9:B (1.35) BS03 MG N/A GO:0005829 ... B5XU49 N/A
    958236 9dua:A (1.4) BS01 5GP N/A GO:0005829 ... B5XU49 N/A
    958237 9dua:A (1.4) BS02 5GP N/A GO:0005829 ... B5XU49 N/A
    958238 9dua:B (1.4) BS01 5GP N/A GO:0005829 ... B5XU49 N/A
    958239 9dua:B (1.4) BS02 5GP N/A GO:0005829 ... B5XU49 N/A
    958240 9dua:B (1.4) BS03 MG N/A GO:0005829 ... B5XU49 N/A
    958241 9dub:A (1.5) BS01 A1BB7 N/A GO:0004672 ... P53355 N/A
    958242 9duc:A (2.63) BS01 PO4 N/A GO:0004340 ... P0A6V8 40632113
    958243 9duc:B (2.63) BS01 PO4 N/A GO:0004340 ... P0A6V8 40632113
    958244 9dud:A (1.32) BS01 FAD N/A GO:0005829 ... B5XU49 N/A
    958245 9dud:A (1.32) BS02 MG N/A GO:0005829 ... B5XU49 N/A
    958246 9dud:A (1.32) BS03 MG N/A GO:0005829 ... B5XU49 N/A
    958247 9dud:A (1.32) BS04 FAD N/A GO:0005829 ... B5XU49 N/A
    958248 9dud:B (1.32) BS01 FAD N/A GO:0005829 ... B5XU49 N/A
    958249 9dud:B (1.32) BS02 FAD N/A GO:0005829 ... B5XU49 N/A
    958250 9dud:B (1.32) BS03 MG N/A GO:0005829 ... B5XU49 N/A
    958251 9dud:B (1.32) BS04 MG N/A GO:0005829 ... B5XU49 N/A
    958252 9due:A (1.65) BS01 A1BB6 N/A GO:0004672 ... P53355 N/A
    958253 9duf:A (1.32) BS01 FMN N/A GO:0005829 ... B5XU49 N/A
    958254 9duf:A (1.32) BS02 MG N/A GO:0005829 ... B5XU49 N/A
    958255 9duf:A (1.32) BS03 MG N/A GO:0005829 ... B5XU49 N/A
    958256 9duf:A (1.32) BS04 FMN N/A GO:0005829 ... B5XU49 N/A
    958257 9duf:B (1.32) BS01 FMN N/A GO:0005829 ... B5XU49 N/A
    958258 9duf:B (1.32) BS02 FMN N/A GO:0005829 ... B5XU49 N/A
    958259 9duf:B (1.32) BS03 MG N/A GO:0005829 ... B5XU49 N/A
    958260 9duf:B (1.32) BS04 MG N/A GO:0005829 ... B5XU49 N/A
    958261 9dui:A (2.25) BS01 A1BCS N/A GO:0004058 ... P80041 40401103
    958262 9dui:B (2.25) BS01 A1BCS N/A GO:0004058 ... P80041 40401103
    958263 9duj:A (1.51) BS01 peptide N/A GO:0004497 ... A0A224AU14 40568218
    958264 9duj:A (1.51) BS02 HEM N/A GO:0004497 ... A0A224AU14 40568218
    958265 9duk:B (2.56) BS01 rna N/A GO:0000028 ... P0A7V0 39854700
    958266 9duk:C (2.56) BS01 rna N/A GO:0000028 ... P0A7V3 39854700
    958267 9duk:D (2.56) BS01 rna N/A GO:0000028 ... P0A7V8 39854700
    958268 9duk:E (2.56) BS01 rna N/A GO:0000028 ... P0A7W1 39854700
    958269 9duk:F (2.56) BS01 rna N/A GO:0002181 ... P02358 39854700
    958270 9duk:G (2.56) BS01 rna N/A GO:0000028 ... P02359 39854700
    958271 9duk:H (2.56) BS01 rna N/A GO:0000028 ... P0A7W7 39854700
    958272 9duk:I (2.56) BS01 rna N/A GO:0002181 ... P0A7X3 39854700
    958273 9duk:J (2.56) BS01 rna N/A GO:0000049 ... P0A7R5 39854700
    958274 9duk:K (2.56) BS01 rna N/A GO:0002181 ... P0A7R9 39854700
    958275 9duk:L (2.56) BS01 rna N/A GO:0000049 ... P0A7S3 39854700
    958276 9duk:M (2.56) BS01 rna N/A GO:0000049 ... P0A7S9 39854700
    958277 9duk:N (2.56) BS01 rna N/A GO:0000028 ... P0AG59 39854700
    958278 9duk:O (2.56) BS01 rna N/A GO:0000028 ... P0ADZ4 39854700
    958279 9duk:P (2.56) BS01 rna N/A GO:0000028 ... P0A7T3 39854700
    958280 9duk:Q (2.56) BS01 rna N/A GO:0000028 ... P0AG63 39854700
    958281 9duk:R (2.56) BS01 rna N/A GO:0002181 ... P0A7T7 39854700
    958282 9duk:S (2.56) BS01 rna N/A GO:0002181 ... P0A7U3 39854700
    958283 9duk:T (2.56) BS01 rna N/A GO:0000028 ... P0A7U7 39854700
    958284 9duk:U (2.56) BS01 rna N/A GO:0000028 ... P68679 39854700
    958285 9dul:B (2.56) BS01 rna N/A GO:0000028 ... P0A7V0 39854700
    958286 9dul:C (2.56) BS01 rna N/A GO:0000028 ... P0A7V3 39854700
    958287 9dul:D (2.56) BS01 rna N/A GO:0000028 ... P0A7V8 39854700
    958288 9dul:E (2.56) BS01 rna N/A GO:0000028 ... P0A7W1 39854700
    958289 9dul:F (2.56) BS01 rna N/A GO:0002181 ... P02358 39854700
    958290 9dul:G (2.56) BS01 rna N/A GO:0000028 ... P02359 39854700
    958291 9dul:H (2.56) BS01 rna N/A GO:0000028 ... P0A7W7 39854700
    958292 9dul:I (2.56) BS01 rna N/A GO:0002181 ... P0A7X3 39854700
    958293 9dul:J (2.56) BS01 rna N/A GO:0000049 ... P0A7R5 39854700
    958294 9dul:K (2.56) BS01 rna N/A GO:0002181 ... P0A7R9 39854700
    958295 9dul:L (2.56) BS01 rna N/A GO:0000049 ... P0A7S3 39854700
    958296 9dul:M (2.56) BS01 rna N/A GO:0000049 ... P0A7S9 39854700
    958297 9dul:N (2.56) BS01 rna N/A GO:0000028 ... P0AG59 39854700
    958298 9dul:O (2.56) BS01 rna N/A GO:0000028 ... P0ADZ4 39854700
    958299 9dul:P (2.56) BS01 rna N/A GO:0000028 ... P0A7T3 39854700
    958300 9dul:Q (2.56) BS01 rna N/A GO:0000028 ... P0AG63 39854700
    958301 9dul:R (2.56) BS01 rna N/A GO:0002181 ... P0A7T7 39854700
    958302 9dul:S (2.56) BS01 rna N/A GO:0002181 ... P0A7U3 39854700
    958303 9dul:T (2.56) BS01 rna N/A GO:0000028 ... P0A7U7 39854700
    958304 9dul:U (2.56) BS01 rna N/A GO:0000028 ... P68679 39854700
    958305 9duq:A (2.8) BS01 GTP N/A GO:0000226 ... Q2XVP4 39516491
    958306 9duq:A (2.8) BS02 MG N/A GO:0000226 ... Q2XVP4 39516491
    958307 9duq:B (2.8) BS01 G2P N/A GO:0000226 ... P02554 39516491
    958308 9duq:C (2.8) BS01 GTP N/A GO:0000226 ... Q2XVP4 39516491
    958309 9duq:C (2.8) BS02 G2P N/A GO:0000226 ... Q2XVP4 39516491
    958310 9duq:D (2.8) BS01 G2P N/A GO:0000226 ... P02554 39516491
    958311 9duq:D (2.8) BS02 GTP N/A GO:0000226 ... P02554 39516491
    958312 9duq:E (2.8) BS01 GTP N/A GO:0000226 ... Q2XVP4 39516491
    958313 9duq:E (2.8) BS02 MG N/A GO:0000226 ... Q2XVP4 39516491
    958314 9duq:F (2.8) BS01 G2P N/A GO:0000226 ... P02554 39516491
    958315 9duq:G (2.8) BS01 GTP N/A GO:0000226 ... Q2XVP4 39516491
    958316 9duq:H (2.8) BS01 G2P N/A GO:0000226 ... P02554 39516491
    958317 9duq:I (2.8) BS01 GTP N/A GO:0000226 ... Q2XVP4 39516491
    958318 9duq:J (2.8) BS01 G2P N/A GO:0000226 ... P02554 39516491
    958319 9duq:K (2.8) BS01 GTP N/A GO:0000226 ... Q2XVP4 39516491
    958320 9duq:L (2.8) BS01 G2P N/A GO:0000226 ... P02554 39516491
    958321 9duq:M (2.8) BS01 GTP N/A GO:0000226 ... Q2XVP4 39516491
    958322 9duq:N (2.8) BS01 G2P N/A GO:0000226 ... P02554 39516491
    958323 9duq:O (2.8) BS01 GTP N/A GO:0000226 ... Q2XVP4 39516491
    958324 9duq:P (2.8) BS01 G2P N/A GO:0000226 ... P02554 39516491
    958325 9duq:Q (2.8) BS01 GTP N/A GO:0000226 ... Q2XVP4 39516491
    958326 9duq:R (2.8) BS01 G2P N/A GO:0000226 ... P02554 39516491
    958327 9dur:B (2.9) BS01 ZN N/A GO:0005515 ... Q96SW2 40950085
    958328 9dur:B (2.9) BS02 A1IQT N/A GO:0005515 ... Q96SW2 40950085
    958329 9dur:C (2.9) BS01 A1IQT N/A N/A Q03111 40950085
    958330 9duu:A (3.4) BS01 peptide N/A GO:0001725 ... P68133 39503885
    958331 9duu:A (3.4) BS02 peptide N/A GO:0001725 ... P68133 39503885
    958332 9duu:A (3.4) BS03 ADP N/A GO:0001725 ... P68133 39503885
    958333 9duu:B (3.4) BS01 peptide N/A GO:0001725 ... P68133 39503885
    958334 9duu:B (3.4) BS02 ADP N/A GO:0001725 ... P68133 39503885
    958335 9duu:C (3.4) BS01 peptide N/A GO:0001725 ... P68133 39503885
    958336 9duu:C (3.4) BS02 ADP N/A GO:0001725 ... P68133 39503885
    958337 9duu:D (3.4) BS01 peptide N/A GO:0001725 ... P68133 39503885
    958338 9duu:D (3.4) BS02 ADP N/A GO:0001725 ... P68133 39503885
    958339 9duu:E (3.4) BS01 peptide N/A GO:0001725 ... P68133 39503885
    958340 9duu:E (3.4) BS02 ADP N/A GO:0001725 ... P68133 39503885
    958341 9duu:F (3.4) BS01 peptide N/A GO:0001725 ... P68133 39503885
    958342 9duu:F (3.4) BS02 ADP N/A GO:0001725 ... P68133 39503885
    958343 9duv:A (3.3) BS01 peptide N/A GO:0001725 ... P68133 39503885
    958344 9duv:A (3.3) BS02 peptide N/A GO:0001725 ... P68133 39503885
    958345 9duv:A (3.3) BS03 ADP N/A GO:0001725 ... P68133 39503885
    958346 9duv:B (3.3) BS01 peptide N/A GO:0001725 ... P68133 39503885
    958347 9duv:B (3.3) BS02 ADP N/A GO:0001725 ... P68133 39503885
    958348 9duv:C (3.3) BS01 peptide N/A GO:0001725 ... P68133 39503885
    958349 9duv:C (3.3) BS02 peptide N/A GO:0001725 ... P68133 39503885
    958350 9duv:C (3.3) BS03 ADP N/A GO:0001725 ... P68133 39503885
    958351 9duv:D (3.3) BS01 peptide N/A GO:0001725 ... P68133 39503885
    958352 9duv:D (3.3) BS02 ADP N/A GO:0001725 ... P68133 39503885
    958353 9duv:E (3.3) BS01 peptide N/A GO:0001725 ... P68133 39503885
    958354 9duv:E (3.3) BS02 ADP N/A GO:0001725 ... P68133 39503885
    958355 9duv:F (3.3) BS01 peptide N/A GO:0001725 ... P68133 39503885
    958356 9duv:F (3.3) BS02 ADP N/A GO:0001725 ... P68133 39503885
    958357 9dv9:A (1.3) BS01 AMP N/A GO:0000287 ... C8PR54 39787173
    958358 9dva:A (3.1) BS01 ADP N/A GO:0001725 ... P68139 39415991
    958359 9dva:B (3.1) BS01 ADP N/A GO:0001725 ... P68139 39415991
    958360 9dva:C (3.1) BS01 ADP N/A GO:0001725 ... P68139 39415991
    958361 9dva:D (3.1) BS01 ADP N/A GO:0001725 ... P68139 39415991
    958362 9dva:E (3.1) BS01 ADP N/A GO:0001725 ... P68139 39415991
    958363 9dvd:A (2.9) BS01 FUC N/A GO:0019031 ... F4YH71 N/A
    958364 9dvh:A (1.656) BS01 GHP N/A N/A Q70AZ9 40215197
    958365 9dvh:A (1.656) BS02 GHP N/A N/A Q70AZ9 40215197
    958366 9dvh:B (1.656) BS01 GHP N/A N/A Q70AZ9 40215197
    958367 9dvh:B (1.656) BS02 GHP N/A N/A Q70AZ9 40215197
    958368 9dvj:A (2.52) BS01 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958369 9dvj:A (2.52) BS02 CLR N/A GO:0000822 ... Q9UBH6 40113814
    958370 9dvj:A (2.52) BS03 CPL N/A GO:0000822 ... Q9UBH6 40113814
    958371 9dvj:B (2.52) BS01 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958372 9dvj:B (2.52) BS02 CLR N/A GO:0000822 ... Q9UBH6 40113814
    958373 9dvj:B (2.52) BS03 CPL N/A GO:0000822 ... Q9UBH6 40113814
    958374 9dvk:A (3.06) BS01 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958375 9dvk:A (3.06) BS02 CLR N/A GO:0000822 ... Q9UBH6 40113814
    958376 9dvk:A (3.06) BS03 CPL N/A GO:0000822 ... Q9UBH6 40113814
    958377 9dvk:A (3.06) BS04 CPL N/A GO:0000822 ... Q9UBH6 40113814
    958378 9dvk:B (3.06) BS01 CPL N/A GO:0000822 ... Q9UBH6 40113814
    958379 9dvk:B (3.06) BS02 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958380 9dvk:B (3.06) BS03 CPL N/A GO:0000822 ... Q9UBH6 40113814
    958381 9dvl:A (2.97) BS01 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958382 9dvl:A (2.97) BS02 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958383 9dvl:A (2.97) BS03 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958384 9dvl:A (2.97) BS04 CLR N/A GO:0000822 ... Q9UBH6 40113814
    958385 9dvl:A (2.97) BS05 CPL N/A GO:0000822 ... Q9UBH6 40113814
    958386 9dvl:B (2.97) BS01 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958387 9dvl:B (2.97) BS02 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958388 9dvl:B (2.97) BS03 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958389 9dvl:B (2.97) BS04 CLR N/A GO:0000822 ... Q9UBH6 40113814
    958390 9dvl:B (2.97) BS05 CPL N/A GO:0000822 ... Q9UBH6 40113814
    958391 9dvm:A (2.92) BS01 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958392 9dvm:A (2.92) BS02 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958393 9dvm:A (2.92) BS03 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958394 9dvm:A (2.92) BS04 I8P N/A GO:0000822 ... Q9UBH6 40113814
    958395 9dvm:A (2.92) BS05 I8P N/A GO:0000822 ... Q9UBH6 40113814
    958396 9dvm:A (2.92) BS06 CLR N/A GO:0000822 ... Q9UBH6 40113814
    958397 9dvm:A (2.92) BS07 CPL N/A GO:0000822 ... Q9UBH6 40113814
    958398 9dvm:A (2.92) BS08 I8P N/A GO:0000822 ... Q9UBH6 40113814
    958399 9dvm:B (2.92) BS01 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958400 9dvm:B (2.92) BS02 PO4 N/A GO:0000822 ... Q9UBH6 40113814

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).