SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    958401 9dvm:B (2.92) BS03 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958402 9dvm:B (2.92) BS04 I8P N/A GO:0000822 ... Q9UBH6 40113814
    958403 9dvm:B (2.92) BS05 I8P N/A GO:0000822 ... Q9UBH6 40113814
    958404 9dvm:B (2.92) BS06 CLR N/A GO:0000822 ... Q9UBH6 40113814
    958405 9dvm:B (2.92) BS07 CPL N/A GO:0000822 ... Q9UBH6 40113814
    958406 9dvn:A (2.75) BS01 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958407 9dvn:A (2.75) BS02 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958408 9dvn:A (2.75) BS03 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958409 9dvn:A (2.75) BS04 I8P N/A GO:0000822 ... Q9UBH6 40113814
    958410 9dvn:A (2.75) BS05 I8P N/A GO:0000822 ... Q9UBH6 40113814
    958411 9dvn:A (2.75) BS06 CLR N/A GO:0000822 ... Q9UBH6 40113814
    958412 9dvn:A (2.75) BS07 CPL N/A GO:0000822 ... Q9UBH6 40113814
    958413 9dvn:A (2.75) BS08 I8P N/A GO:0000822 ... Q9UBH6 40113814
    958414 9dvn:B (2.75) BS01 I8P N/A GO:0000822 ... Q9UBH6 40113814
    958415 9dvn:B (2.75) BS02 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958416 9dvn:B (2.75) BS03 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958417 9dvn:B (2.75) BS04 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958418 9dvn:B (2.75) BS05 I8P N/A GO:0000822 ... Q9UBH6 40113814
    958419 9dvn:B (2.75) BS06 I8P N/A GO:0000822 ... Q9UBH6 40113814
    958420 9dvn:B (2.75) BS07 CLR N/A GO:0000822 ... Q9UBH6 40113814
    958421 9dvn:B (2.75) BS08 CPL N/A GO:0000822 ... Q9UBH6 40113814
    958422 9dvo:A (3.1) BS01 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958423 9dvo:A (3.1) BS02 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958424 9dvo:A (3.1) BS03 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958425 9dvo:A (3.1) BS04 I8P N/A GO:0000822 ... Q9UBH6 40113814
    958426 9dvo:A (3.1) BS05 I8P N/A GO:0000822 ... Q9UBH6 40113814
    958427 9dvo:A (3.1) BS06 CLR N/A GO:0000822 ... Q9UBH6 40113814
    958428 9dvo:A (3.1) BS07 CPL N/A GO:0000822 ... Q9UBH6 40113814
    958429 9dvo:A (3.1) BS08 I8P N/A GO:0000822 ... Q9UBH6 40113814
    958430 9dvo:B (3.1) BS01 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958431 9dvo:B (3.1) BS02 I8P N/A GO:0000822 ... Q9UBH6 40113814
    958432 9dvo:B (3.1) BS03 I8P N/A GO:0000822 ... Q9UBH6 40113814
    958433 9dvo:B (3.1) BS04 CLR N/A GO:0000822 ... Q9UBH6 40113814
    958434 9dvo:B (3.1) BS05 CPL N/A GO:0000822 ... Q9UBH6 40113814
    958435 9dvp:A (2.81) BS01 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958436 9dvp:A (2.81) BS02 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958437 9dvp:A (2.81) BS03 I8P N/A GO:0000822 ... Q9UBH6 40113814
    958438 9dvp:A (2.81) BS04 I8P N/A GO:0000822 ... Q9UBH6 40113814
    958439 9dvp:A (2.81) BS05 CLR N/A GO:0000822 ... Q9UBH6 40113814
    958440 9dvp:A (2.81) BS06 CPL N/A GO:0000822 ... Q9UBH6 40113814
    958441 9dvp:A (2.81) BS07 I8P N/A GO:0000822 ... Q9UBH6 40113814
    958442 9dvp:B (2.81) BS01 I8P N/A GO:0000822 ... Q9UBH6 40113814
    958443 9dvp:B (2.81) BS02 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958444 9dvp:B (2.81) BS03 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958445 9dvp:B (2.81) BS04 PO4 N/A GO:0000822 ... Q9UBH6 40113814
    958446 9dvp:B (2.81) BS05 I8P N/A GO:0000822 ... Q9UBH6 40113814
    958447 9dvp:B (2.81) BS06 I8P N/A GO:0000822 ... Q9UBH6 40113814
    958448 9dvp:B (2.81) BS07 CLR N/A GO:0000822 ... Q9UBH6 40113814
    958449 9dvp:B (2.81) BS08 CPL N/A GO:0000822 ... Q9UBH6 40113814
    958450 9dvs:C (2.5) BS01 dna N/A GO:0003677 ... Q31N17 41667880
    958451 9dvs:D (2.5) BS01 dna N/A GO:0003677 ... P42079 41667880
    958452 9dvs:D (2.5) BS02 MG N/A GO:0003677 ... P42079 41667880
    958453 9dvs:D (2.5) BS03 ZN N/A GO:0003677 ... P42079 41667880
    958454 9dvs:F (2.5) BS01 ZN N/A GO:0003677 ... Q31N15 41667880
    958455 9dvs:G (2.5) BS01 dna N/A GO:0003677 ... P38023 41667880
    958456 9dvs:G (2.5) BS02 dna N/A GO:0003677 ... P38023 41667880
    958457 9dvt:A (3.74) BS01 dna N/A GO:0003677 ... Q31L30 41667880
    958458 9dvt:R (3.74) BS01 dna N/A GO:0000160 ... Q31S42 41667880
    958459 9dvt:R (3.74) BS02 dna N/A GO:0000160 ... Q31S42 41667880
    958460 9dvt:S (3.74) BS01 dna N/A GO:0000160 ... Q31S42 41667880
    958461 9dvt:S (3.74) BS02 dna N/A GO:0000160 ... Q31S42 41667880
    958462 9dvu:A (3.7) BS01 dna N/A GO:0003677 ... Q31L30 41667880
    958463 9dvu:A (3.7) BS02 dna N/A GO:0003677 ... Q31L30 41667880
    958464 9dvu:C (3.7) BS01 dna N/A GO:0003677 ... Q31N17 41667880
    958465 9dvu:D (3.7) BS01 dna N/A GO:0003677 ... P42079 41667880
    958466 9dvu:D (3.7) BS02 MG N/A GO:0003677 ... P42079 41667880
    958467 9dvu:D (3.7) BS03 ZN N/A GO:0003677 ... P42079 41667880
    958468 9dvu:F (3.7) BS01 ZN N/A GO:0003677 ... Q31N15 41667880
    958469 9dvu:G (3.7) BS01 dna N/A GO:0003677 ... P38023 41667880
    958470 9dvu:G (3.7) BS02 dna N/A GO:0003677 ... P38023 41667880
    958471 9dvu:R (3.7) BS01 dna N/A GO:0000160 ... Q31S42 41667880
    958472 9dvu:R (3.7) BS02 dna N/A GO:0000160 ... Q31S42 41667880
    958473 9dvu:S (3.7) BS01 dna N/A GO:0000160 ... Q31S42 41667880
    958474 9dvu:S (3.7) BS02 dna N/A GO:0000160 ... Q31S42 41667880
    958475 9dvy:A (3.2) BS01 peptide N/A GO:0005524 ... O76031 N/A
    958476 9dvy:A (3.2) BS02 ATP N/A GO:0005524 ... O76031 N/A
    958477 9dvy:B (3.2) BS01 ATP N/A GO:0005524 ... O76031 N/A
    958478 9dvy:C (3.2) BS01 peptide N/A GO:0005524 ... O76031 N/A
    958479 9dvy:C (3.2) BS02 ATP N/A GO:0005524 ... O76031 N/A
    958480 9dvy:D (3.2) BS01 peptide N/A GO:0005524 ... O76031 N/A
    958481 9dvy:D (3.2) BS02 ATP N/A GO:0005524 ... O76031 N/A
    958482 9dvy:D (3.2) BS03 ATP N/A GO:0005524 ... O76031 N/A
    958483 9dvy:E (3.2) BS01 peptide N/A GO:0005524 ... O76031 N/A
    958484 9dvy:E (3.2) BS02 ADP N/A GO:0005524 ... O76031 N/A
    958485 9dvz:A (2.54) BS01 BGC N/A GO:0004340 ... P0A6V8 40632113
    958486 9dvz:A (2.54) BS02 PO4 N/A GO:0004340 ... P0A6V8 40632113
    958487 9dvz:B (2.54) BS01 BGC N/A GO:0004340 ... P0A6V8 40632113
    958488 9dvz:B (2.54) BS02 PO4 N/A GO:0004340 ... P0A6V8 40632113
    958489 9dw3:A (2.4) BS01 BO2 N/A GO:0004176 ... Q16740 41593052
    958490 9dw3:B (2.4) BS01 BO2 N/A GO:0004176 ... Q16740 41593052
    958491 9dw3:C (2.4) BS01 BO2 N/A GO:0004176 ... Q16740 41593052
    958492 9dw3:D (2.4) BS01 BO2 N/A GO:0004176 ... Q16740 41593052
    958493 9dw3:E (2.4) BS01 BO2 N/A GO:0004176 ... Q16740 41593052
    958494 9dw3:F (2.4) BS01 BO2 N/A GO:0004176 ... Q16740 41593052
    958495 9dw3:G (2.4) BS01 BO2 N/A GO:0004176 ... Q16740 41593052
    958496 9dw3:H (2.4) BS01 BO2 N/A GO:0004176 ... Q16740 41593052
    958497 9dw3:I (2.4) BS01 BO2 N/A GO:0004176 ... Q16740 41593052
    958498 9dw3:J (2.4) BS01 BO2 N/A GO:0004176 ... Q16740 41593052
    958499 9dw3:K (2.4) BS01 BO2 N/A GO:0004176 ... Q16740 41593052
    958500 9dw3:L (2.4) BS01 BO2 N/A GO:0004176 ... Q16740 41593052
    958501 9dw3:M (2.4) BS01 BO2 N/A GO:0004176 ... Q16740 41593052
    958502 9dw3:N (2.4) BS01 BO2 N/A GO:0004176 ... Q16740 41593052
    958503 9dw4:A (9.0) BS01 peptide N/A GO:0005254 ... P13569 39495916
    958504 9dw5:G (3.8) BS01 MG N/A GO:0000287 ... P00517 39495916
    958505 9dw5:G (3.8) BS02 ANP N/A GO:0000287 ... P00517 39495916
    958506 9dw6:A (1.9) BS01 peptide N/A GO:0008233 ... P0DTD1 39773525
    958507 9dw7:G (6.0) BS01 MG N/A GO:0000287 ... P00517 39495916
    958508 9dw7:G (6.0) BS02 ANP N/A GO:0000287 ... P00517 39495916
    958509 9dw8:A (3.5) BS01 B44 N/A GO:0005254 ... P13569 39495916
    958510 9dw8:A (3.5) BS02 B44 N/A GO:0005254 ... P13569 39495916
    958511 9dw8:G (3.5) BS01 MG N/A GO:0000287 ... P00517 39495916
    958512 9dw8:G (3.5) BS02 ANP N/A GO:0000287 ... P00517 39495916
    958513 9dw9:A (2.8) BS01 MG N/A GO:0005254 ... P13569 39495916
    958514 9dw9:A (2.8) BS02 MG N/A GO:0005254 ... P13569 39495916
    958515 9dw9:A (2.8) BS03 ATP N/A GO:0005254 ... P13569 39495916
    958516 9dw9:A (2.8) BS04 ATP N/A GO:0005254 ... P13569 39495916
    958517 9dw9:G (2.8) BS01 ATP N/A GO:0000287 ... P00517 39495916
    958518 9dw9:G (2.8) BS02 MG N/A GO:0000287 ... P00517 39495916
    958519 9dwd:A (3.13) BS01 QNG N/A GO:0016032 ... P04591 39416065
    958520 9dwd:A (3.13) BS02 QNG N/A GO:0016032 ... P04591 39416065
    958521 9dwd:B (3.13) BS01 QNG N/A GO:0016032 ... P04591 39416065
    958522 9dwd:B (3.13) BS02 QNG N/A GO:0016032 ... P04591 39416065
    958523 9dwd:C (3.13) BS01 QNG N/A GO:0016032 ... P04591 39416065
    958524 9dwd:D (3.13) BS01 QNG N/A GO:0016032 ... P04591 39416065
    958525 9dwd:D (3.13) BS02 QNG N/A GO:0016032 ... P04591 39416065
    958526 9dwd:E (3.13) BS01 QNG N/A GO:0016032 ... P04591 39416065
    958527 9dwd:E (3.13) BS02 QNG N/A GO:0016032 ... P04591 39416065
    958528 9dwd:F (3.13) BS01 QNG N/A GO:0016032 ... P04591 39416065
    958529 9dwd:G (3.13) BS01 IHP N/A GO:0016032 ... P04591 39416065
    958530 9dwd:G (3.13) BS02 QNG N/A GO:0016032 ... P04591 39416065
    958531 9dwd:G (3.13) BS03 QNG N/A GO:0016032 ... P04591 39416065
    958532 9dwd:H (3.13) BS01 QNG N/A GO:0016032 ... P04591 39416065
    958533 9dwd:H (3.13) BS02 QNG N/A GO:0016032 ... P04591 39416065
    958534 9dwd:I (3.13) BS01 QNG N/A GO:0016032 ... P04591 39416065
    958535 9dwd:J (3.13) BS01 QNG N/A GO:0016032 ... P04591 39416065
    958536 9dwd:J (3.13) BS02 QNG N/A GO:0016032 ... P04591 39416065
    958537 9dwd:K (3.13) BS01 QNG N/A GO:0016032 ... P04591 39416065
    958538 9dwd:K (3.13) BS02 QNG N/A GO:0016032 ... P04591 39416065
    958539 9dwd:L (3.13) BS01 QNG N/A GO:0016032 ... P04591 39416065
    958540 9dwd:M (3.13) BS01 QNG N/A GO:0016032 ... P04591 39416065
    958541 9dwd:M (3.13) BS02 QNG N/A GO:0016032 ... P04591 39416065
    958542 9dwd:N (3.13) BS01 QNG N/A GO:0016032 ... P04591 39416065
    958543 9dwd:N (3.13) BS02 QNG N/A GO:0016032 ... P04591 39416065
    958544 9dwd:O (3.13) BS01 QNG N/A GO:0016032 ... P04591 39416065
    958545 9dwd:P (3.13) BS01 QNG N/A GO:0016032 ... P04591 39416065
    958546 9dwd:P (3.13) BS02 QNG N/A GO:0016032 ... P04591 39416065
    958547 9dwd:Q (3.13) BS01 QNG N/A GO:0016032 ... P04591 39416065
    958548 9dwd:Q (3.13) BS02 QNG N/A GO:0016032 ... P04591 39416065
    958549 9dwd:R (3.13) BS01 QNG N/A GO:0016032 ... P04591 39416065
    958550 9dwe:A (2.8) BS01 GAL N/A GO:0016020 ... A0A8E4ZAK5 39737954
    958551 9dwe:A (2.8) BS02 SIA N/A GO:0016020 ... A0A8E4ZAK5 39737954
    958552 9dwe:B (2.8) BS01 GAL N/A GO:0016020 ... A0A8E4ZAK5 39737954
    958553 9dwe:B (2.8) BS02 SIA N/A GO:0016020 ... A0A8E4ZAK5 39737954
    958554 9dwe:C (2.8) BS01 SIA N/A GO:0016020 ... A0A8E4ZAK5 39737954
    958555 9dwf:A (3.1) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    958556 9dwf:A (3.1) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    958557 9dwf:A (3.1) BS03 dna N/A GO:0000786 ... Q71DI3 N/A
    958558 9dwf:B (3.1) BS01 dna N/A GO:0000781 ... P62805 N/A
    958559 9dwf:B (3.1) BS02 dna N/A GO:0000781 ... P62805 N/A
    958560 9dwf:C (3.1) BS01 dna N/A GO:0000786 ... P0C0S8 N/A
    958561 9dwf:C (3.1) BS02 dna N/A GO:0000786 ... P0C0S8 N/A
    958562 9dwf:D (3.1) BS01 dna N/A GO:0000786 ... P62807 N/A
    958563 9dwf:D (3.1) BS02 dna N/A GO:0000786 ... P62807 N/A
    958564 9dwf:E (3.1) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    958565 9dwf:E (3.1) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    958566 9dwf:F (3.1) BS01 dna N/A GO:0000781 ... P62805 N/A
    958567 9dwf:F (3.1) BS02 dna N/A GO:0000781 ... P62805 N/A
    958568 9dwf:G (3.1) BS01 dna N/A GO:0000786 ... P0C0S8 N/A
    958569 9dwf:G (3.1) BS02 dna N/A GO:0000786 ... P0C0S8 N/A
    958570 9dwf:G (3.1) BS03 dna N/A GO:0000786 ... P0C0S8 N/A
    958571 9dwf:H (3.1) BS01 dna N/A GO:0000786 ... P62807 N/A
    958572 9dwf:H (3.1) BS02 dna N/A GO:0000786 ... P62807 N/A
    958573 9dwg:A (3.3) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    958574 9dwg:A (3.3) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    958575 9dwg:B (3.3) BS01 dna N/A GO:0000781 ... P62805 N/A
    958576 9dwg:B (3.3) BS02 dna N/A GO:0000781 ... P62805 N/A
    958577 9dwg:C (3.3) BS01 dna N/A GO:0000786 ... P0C0S8 N/A
    958578 9dwg:C (3.3) BS02 dna N/A GO:0000786 ... P0C0S8 N/A
    958579 9dwg:D (3.3) BS01 dna N/A GO:0000786 ... P62807 N/A
    958580 9dwg:D (3.3) BS02 dna N/A GO:0000786 ... P62807 N/A
    958581 9dwg:E (3.3) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    958582 9dwg:E (3.3) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    958583 9dwg:F (3.3) BS01 dna N/A GO:0000781 ... P62805 N/A
    958584 9dwg:F (3.3) BS02 dna N/A GO:0000781 ... P62805 N/A
    958585 9dwg:G (3.3) BS01 dna N/A GO:0000786 ... P0C0S8 N/A
    958586 9dwg:G (3.3) BS02 dna N/A GO:0000786 ... P0C0S8 N/A
    958587 9dwg:L (3.3) BS01 dna N/A GO:0003677 ... P06746 N/A
    958588 9dwg:L (3.3) BS02 dna N/A GO:0003677 ... P06746 N/A
    958589 9dwh:A (3.3) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    958590 9dwh:A (3.3) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    958591 9dwh:A (3.3) BS03 dna N/A GO:0000786 ... Q71DI3 N/A
    958592 9dwh:B (3.3) BS01 dna N/A GO:0000781 ... P62805 N/A
    958593 9dwh:B (3.3) BS02 dna N/A GO:0000781 ... P62805 N/A
    958594 9dwh:C (3.3) BS01 dna N/A GO:0000786 ... P0C0S8 N/A
    958595 9dwh:C (3.3) BS02 dna N/A GO:0000786 ... P0C0S8 N/A
    958596 9dwh:D (3.3) BS01 dna N/A GO:0000786 ... P62807 N/A
    958597 9dwh:D (3.3) BS02 dna N/A GO:0000786 ... P62807 N/A
    958598 9dwh:E (3.3) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    958599 9dwh:E (3.3) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    958600 9dwh:F (3.3) BS01 dna N/A GO:0000781 ... P62805 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).