SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    958601 9dwh:F (3.3) BS02 dna N/A GO:0000781 ... P62805 N/A
    958602 9dwh:G (3.3) BS01 dna N/A GO:0000786 ... P0C0S8 N/A
    958603 9dwh:G (3.3) BS02 dna N/A GO:0000786 ... P0C0S8 N/A
    958604 9dwh:H (3.3) BS01 dna N/A GO:0000786 ... P62807 N/A
    958605 9dwh:H (3.3) BS02 dna N/A GO:0000786 ... P62807 N/A
    958606 9dwh:L (3.3) BS01 dna N/A GO:0003677 ... P06746 N/A
    958607 9dwh:L (3.3) BS02 dna N/A GO:0003677 ... P06746 N/A
    958608 9dwi:A (3.3) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    958609 9dwi:A (3.3) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    958610 9dwi:A (3.3) BS03 dna N/A GO:0000786 ... Q71DI3 N/A
    958611 9dwi:B (3.3) BS01 dna N/A GO:0000781 ... P62805 N/A
    958612 9dwi:B (3.3) BS02 dna N/A GO:0000781 ... P62805 N/A
    958613 9dwi:C (3.3) BS01 dna N/A GO:0000786 ... P0C0S8 N/A
    958614 9dwi:C (3.3) BS02 dna N/A GO:0000786 ... P0C0S8 N/A
    958615 9dwi:D (3.3) BS01 dna N/A GO:0000786 ... P62807 N/A
    958616 9dwi:D (3.3) BS02 dna N/A GO:0000786 ... P62807 N/A
    958617 9dwi:E (3.3) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    958618 9dwi:E (3.3) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    958619 9dwi:F (3.3) BS01 dna N/A GO:0000781 ... P62805 N/A
    958620 9dwi:F (3.3) BS02 dna N/A GO:0000781 ... P62805 N/A
    958621 9dwi:G (3.3) BS01 dna N/A GO:0000786 ... P0C0S8 N/A
    958622 9dwi:G (3.3) BS02 dna N/A GO:0000786 ... P0C0S8 N/A
    958623 9dwi:H (3.3) BS01 dna N/A GO:0000786 ... P62807 N/A
    958624 9dwi:H (3.3) BS02 dna N/A GO:0000786 ... P62807 N/A
    958625 9dwi:L (3.3) BS01 dna N/A GO:0003677 ... P06746 N/A
    958626 9dwi:L (3.3) BS02 dna N/A GO:0003677 ... P06746 N/A
    958627 9dwi:L (3.3) BS03 dna N/A GO:0003677 ... P06746 N/A
    958628 9dwj:A (3.4) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    958629 9dwj:A (3.4) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    958630 9dwj:A (3.4) BS03 dna N/A GO:0000786 ... Q71DI3 N/A
    958631 9dwj:B (3.4) BS01 dna N/A GO:0000781 ... P62805 N/A
    958632 9dwj:B (3.4) BS02 dna N/A GO:0000781 ... P62805 N/A
    958633 9dwj:C (3.4) BS01 dna N/A GO:0000786 ... P0C0S8 N/A
    958634 9dwj:C (3.4) BS02 dna N/A GO:0000786 ... P0C0S8 N/A
    958635 9dwj:D (3.4) BS01 dna N/A GO:0000786 ... P62807 N/A
    958636 9dwj:D (3.4) BS02 dna N/A GO:0000786 ... P62807 N/A
    958637 9dwj:E (3.4) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    958638 9dwj:E (3.4) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    958639 9dwj:F (3.4) BS01 dna N/A GO:0000781 ... P62805 N/A
    958640 9dwj:F (3.4) BS02 dna N/A GO:0000781 ... P62805 N/A
    958641 9dwj:G (3.4) BS01 dna N/A GO:0000786 ... P0C0S8 N/A
    958642 9dwj:G (3.4) BS02 dna N/A GO:0000786 ... P0C0S8 N/A
    958643 9dwj:H (3.4) BS01 dna N/A GO:0000786 ... P62807 N/A
    958644 9dwj:H (3.4) BS02 dna N/A GO:0000786 ... P62807 N/A
    958645 9dwk:A (4.3) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    958646 9dwk:A (4.3) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    958647 9dwk:B (4.3) BS01 dna N/A GO:0000781 ... P62805 N/A
    958648 9dwk:C (4.3) BS01 dna N/A GO:0000786 ... P0C0S8 N/A
    958649 9dwk:C (4.3) BS02 dna N/A GO:0000786 ... P0C0S8 N/A
    958650 9dwk:D (4.3) BS01 dna N/A GO:0000786 ... P62807 N/A
    958651 9dwk:E (4.3) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    958652 9dwk:E (4.3) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    958653 9dwk:F (4.3) BS01 dna N/A GO:0000781 ... P62805 N/A
    958654 9dwk:F (4.3) BS02 dna N/A GO:0000781 ... P62805 N/A
    958655 9dwk:G (4.3) BS01 dna N/A GO:0000786 ... P0C0S8 N/A
    958656 9dwk:G (4.3) BS02 dna N/A GO:0000786 ... P0C0S8 N/A
    958657 9dwk:L (4.3) BS01 dna N/A GO:0003677 ... P06746 N/A
    958658 9dwk:L (4.3) BS02 dna N/A GO:0003677 ... P06746 N/A
    958659 9dwl:A (3.9) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    958660 9dwl:A (3.9) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    958661 9dwl:A (3.9) BS03 dna N/A GO:0000786 ... Q71DI3 N/A
    958662 9dwl:B (3.9) BS01 dna N/A GO:0000781 ... P62805 N/A
    958663 9dwl:B (3.9) BS02 dna N/A GO:0000781 ... P62805 N/A
    958664 9dwl:C (3.9) BS01 dna N/A GO:0000786 ... P0C0S8 N/A
    958665 9dwl:C (3.9) BS02 dna N/A GO:0000786 ... P0C0S8 N/A
    958666 9dwl:D (3.9) BS01 dna N/A GO:0000786 ... P62807 N/A
    958667 9dwl:E (3.9) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    958668 9dwl:E (3.9) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    958669 9dwl:F (3.9) BS01 dna N/A GO:0000781 ... P62805 N/A
    958670 9dwl:F (3.9) BS02 dna N/A GO:0000781 ... P62805 N/A
    958671 9dwl:G (3.9) BS01 dna N/A GO:0000786 ... P0C0S8 N/A
    958672 9dwl:G (3.9) BS02 dna N/A GO:0000786 ... P0C0S8 N/A
    958673 9dwl:G (3.9) BS03 dna N/A GO:0000786 ... P0C0S8 N/A
    958674 9dwl:H (3.9) BS01 dna N/A GO:0000786 ... P62807 N/A
    958675 9dwm:A (4.2) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    958676 9dwm:A (4.2) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    958677 9dwm:B (4.2) BS01 dna N/A GO:0000781 ... P62805 N/A
    958678 9dwm:C (4.2) BS01 dna N/A GO:0000786 ... P0C0S8 N/A
    958679 9dwm:C (4.2) BS02 dna N/A GO:0000786 ... P0C0S8 N/A
    958680 9dwm:D (4.2) BS01 dna N/A GO:0000786 ... P62807 N/A
    958681 9dwm:E (4.2) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    958682 9dwm:E (4.2) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    958683 9dwm:F (4.2) BS01 dna N/A GO:0000781 ... P62805 N/A
    958684 9dwm:G (4.2) BS01 dna N/A GO:0000786 ... P0C0S8 N/A
    958685 9dwm:L (4.2) BS01 dna N/A GO:0003677 ... P06746 N/A
    958686 9dwm:L (4.2) BS02 dna N/A GO:0003677 ... P06746 N/A
    958687 9dwn:A (3.2) BS01 K N/A GO:0005267 ... Q9HB14 40178898
    958688 9dwn:A (3.2) BS02 K N/A GO:0005267 ... Q9HB14 40178898
    958689 9dwn:A (3.2) BS03 K N/A GO:0005267 ... Q9HB14 40178898
    958690 9dwn:A (3.2) BS04 K N/A GO:0005267 ... Q9HB14 40178898
    958691 9dwn:A (3.2) BS05 K N/A GO:0005267 ... Q9HB14 40178898
    958692 9dwn:B (3.2) BS01 K N/A GO:0005267 ... Q9HB14 40178898
    958693 9dwn:B (3.2) BS02 K N/A GO:0005267 ... Q9HB14 40178898
    958694 9dwn:B (3.2) BS03 K N/A GO:0005267 ... Q9HB14 40178898
    958695 9dwn:B (3.2) BS04 K N/A GO:0005267 ... Q9HB14 40178898
    958696 9dwn:B (3.2) BS05 K N/A GO:0005267 ... Q9HB14 40178898
    958697 9dwp:A (1.32) BS01 MEZ N/A GO:0030288 ... Q9I561 N/A
    958698 9dwr:A (1.8) BS01 HEM N/A GO:0004497 ... Q2IU02 N/A
    958699 9dwr:A (1.8) BS02 ANN N/A GO:0004497 ... Q2IU02 N/A
    958700 9dwv:B (3.5) BS01 ZN N/A GO:0005515 ... Q96SW2 40707481
    958701 9dwv:B (3.5) BS02 A1BC8 N/A GO:0005515 ... Q96SW2 40707481
    958702 9dwv:C (3.5) BS01 A1BC8 N/A GO:0003676 ... Q8WUA2 40707481
    958703 9dww:C (3.3) BS01 ZN N/A GO:0005515 ... Q96SW2 40707481
    958704 9dww:C (3.3) BS02 A1BC8 N/A GO:0005515 ... Q96SW2 40707481
    958705 9dwy:A (2.9) BS01 T3 N/A GO:0005515 ... P36021 40680733
    958706 9dwz:A (2.35) BS01 BCL N/A GO:0005886 ... P35090 N/A
    958707 9dwz:A (2.35) BS02 BCL N/A GO:0005886 ... P35090 N/A
    958708 9dwz:A (2.35) BS03 IRM N/A GO:0005886 ... P35090 N/A
    958709 9dwz:A (2.35) BS04 BCL N/A GO:0005886 ... P35090 N/A
    958710 9dwz:A (2.35) BS05 IRM N/A GO:0005886 ... P35090 N/A
    958711 9dwz:A (2.35) BS06 IRM N/A GO:0005886 ... P35090 N/A
    958712 9dwz:B (2.35) BS01 BCL N/A GO:0005886 ... P35096 N/A
    958713 9dwz:B (2.35) BS02 BCL N/A GO:0005886 ... P35096 N/A
    958714 9dwz:B (2.35) BS03 BCL N/A GO:0005886 ... P35096 N/A
    958715 9dwz:B (2.35) BS04 IRM N/A GO:0005886 ... P35096 N/A
    958716 9dwz:C (2.35) BS01 IRM N/A GO:0005886 ... P35090 N/A
    958717 9dwz:C (2.35) BS02 BCL N/A GO:0005886 ... P35090 N/A
    958718 9dwz:C (2.35) BS03 BCL N/A GO:0005886 ... P35090 N/A
    958719 9dwz:C (2.35) BS04 IRM N/A GO:0005886 ... P35090 N/A
    958720 9dwz:C (2.35) BS05 BCL N/A GO:0005886 ... P35090 N/A
    958721 9dwz:C (2.35) BS06 IRM N/A GO:0005886 ... P35090 N/A
    958722 9dwz:D (2.35) BS01 IRM N/A GO:0005886 ... P35096 N/A
    958723 9dwz:D (2.35) BS02 BCL N/A GO:0005886 ... P35096 N/A
    958724 9dwz:D (2.35) BS03 BCL N/A GO:0005886 ... P35096 N/A
    958725 9dwz:D (2.35) BS04 BCL N/A GO:0005886 ... P35096 N/A
    958726 9dwz:E (2.35) BS01 IRM N/A GO:0005886 ... P35090 N/A
    958727 9dwz:E (2.35) BS02 BCL N/A GO:0005886 ... P35090 N/A
    958728 9dwz:E (2.35) BS03 BCL N/A GO:0005886 ... P35090 N/A
    958729 9dwz:E (2.35) BS04 BCL N/A GO:0005886 ... P35090 N/A
    958730 9dwz:E (2.35) BS05 IRM N/A GO:0005886 ... P35090 N/A
    958731 9dwz:E (2.35) BS06 IRM N/A GO:0005886 ... P35090 N/A
    958732 9dwz:F (2.35) BS01 BCL N/A GO:0005886 ... P35096 N/A
    958733 9dwz:F (2.35) BS02 BCL N/A GO:0005886 ... P35096 N/A
    958734 9dwz:F (2.35) BS03 BCL N/A GO:0005886 ... P35096 N/A
    958735 9dwz:F (2.35) BS04 IRM N/A GO:0005886 ... P35096 N/A
    958736 9dwz:G (2.35) BS01 BCL N/A GO:0005886 ... P35090 N/A
    958737 9dwz:G (2.35) BS02 BCL N/A GO:0005886 ... P35090 N/A
    958738 9dwz:G (2.35) BS03 IRM N/A GO:0005886 ... P35090 N/A
    958739 9dwz:G (2.35) BS04 BCL N/A GO:0005886 ... P35090 N/A
    958740 9dwz:G (2.35) BS05 IRM N/A GO:0005886 ... P35090 N/A
    958741 9dwz:G (2.35) BS06 IRM N/A GO:0005886 ... P35090 N/A
    958742 9dwz:H (2.35) BS01 BCL N/A GO:0005886 ... P35096 N/A
    958743 9dwz:H (2.35) BS02 BCL N/A GO:0005886 ... P35096 N/A
    958744 9dwz:H (2.35) BS03 BCL N/A GO:0005886 ... P35096 N/A
    958745 9dwz:H (2.35) BS04 IRM N/A GO:0005886 ... P35096 N/A
    958746 9dwz:I (2.35) BS01 IRM N/A GO:0005886 ... P35090 N/A
    958747 9dwz:I (2.35) BS02 IRM N/A GO:0005886 ... P35090 N/A
    958748 9dwz:I (2.35) BS03 BCL N/A GO:0005886 ... P35090 N/A
    958749 9dwz:I (2.35) BS04 BCL N/A GO:0005886 ... P35090 N/A
    958750 9dwz:I (2.35) BS05 BCL N/A GO:0005886 ... P35090 N/A
    958751 9dwz:I (2.35) BS06 IRM N/A GO:0005886 ... P35090 N/A
    958752 9dwz:J (2.35) BS01 IRM N/A GO:0005886 ... P35096 N/A
    958753 9dwz:J (2.35) BS02 BCL N/A GO:0005886 ... P35096 N/A
    958754 9dwz:J (2.35) BS03 BCL N/A GO:0005886 ... P35096 N/A
    958755 9dwz:J (2.35) BS04 BCL N/A GO:0005886 ... P35096 N/A
    958756 9dwz:K (2.35) BS01 IRM N/A GO:0005886 ... P35090 N/A
    958757 9dwz:K (2.35) BS02 BCL N/A GO:0005886 ... P35090 N/A
    958758 9dwz:K (2.35) BS03 BCL N/A GO:0005886 ... P35090 N/A
    958759 9dwz:K (2.35) BS04 BCL N/A GO:0005886 ... P35090 N/A
    958760 9dwz:K (2.35) BS05 IRM N/A GO:0005886 ... P35090 N/A
    958761 9dwz:K (2.35) BS06 IRM N/A GO:0005886 ... P35090 N/A
    958762 9dwz:L (2.35) BS01 BCL N/A GO:0005886 ... P35096 N/A
    958763 9dwz:L (2.35) BS02 BCL N/A GO:0005886 ... P35096 N/A
    958764 9dwz:L (2.35) BS03 BCL N/A GO:0005886 ... P35096 N/A
    958765 9dwz:L (2.35) BS04 IRM N/A GO:0005886 ... P35096 N/A
    958766 9dwz:M (2.35) BS01 IRM N/A GO:0005886 ... P35090 N/A
    958767 9dwz:M (2.35) BS02 BCL N/A GO:0005886 ... P35090 N/A
    958768 9dwz:M (2.35) BS03 BCL N/A GO:0005886 ... P35090 N/A
    958769 9dwz:M (2.35) BS04 IRM N/A GO:0005886 ... P35090 N/A
    958770 9dwz:M (2.35) BS05 BCL N/A GO:0005886 ... P35090 N/A
    958771 9dwz:M (2.35) BS06 IRM N/A GO:0005886 ... P35090 N/A
    958772 9dwz:N (2.35) BS01 BCL N/A GO:0005886 ... P35096 N/A
    958773 9dwz:N (2.35) BS02 BCL N/A GO:0005886 ... P35096 N/A
    958774 9dwz:N (2.35) BS03 BCL N/A GO:0005886 ... P35096 N/A
    958775 9dwz:N (2.35) BS04 IRM N/A GO:0005886 ... P35096 N/A
    958776 9dwz:O (2.35) BS01 IRM N/A GO:0005886 ... P35090 N/A
    958777 9dwz:O (2.35) BS02 IRM N/A GO:0005886 ... P35090 N/A
    958778 9dwz:O (2.35) BS03 BCL N/A GO:0005886 ... P35090 N/A
    958779 9dwz:O (2.35) BS04 BCL N/A GO:0005886 ... P35090 N/A
    958780 9dwz:O (2.35) BS05 BCL N/A GO:0005886 ... P35090 N/A
    958781 9dwz:O (2.35) BS06 IRM N/A GO:0005886 ... P35090 N/A
    958782 9dwz:P (2.35) BS01 IRM N/A GO:0005886 ... P35096 N/A
    958783 9dwz:P (2.35) BS02 BCL N/A GO:0005886 ... P35096 N/A
    958784 9dwz:P (2.35) BS03 BCL N/A GO:0005886 ... P35096 N/A
    958785 9dwz:P (2.35) BS04 BCL N/A GO:0005886 ... P35096 N/A
    958786 9dwz:Q (2.35) BS01 IRM N/A GO:0005886 ... P35090 N/A
    958787 9dwz:Q (2.35) BS02 IRM N/A GO:0005886 ... P35090 N/A
    958788 9dwz:Q (2.35) BS03 BCL N/A GO:0005886 ... P35090 N/A
    958789 9dwz:Q (2.35) BS04 IRM N/A GO:0005886 ... P35090 N/A
    958790 9dwz:Q (2.35) BS05 BCL N/A GO:0005886 ... P35090 N/A
    958791 9dwz:Q (2.35) BS06 BCL N/A GO:0005886 ... P35090 N/A
    958792 9dwz:Q (2.35) BS07 BCL N/A GO:0005886 ... P35090 N/A
    958793 9dwz:R (2.35) BS01 IRM N/A GO:0005886 ... P35096 N/A
    958794 9dwz:R (2.35) BS02 BCL N/A GO:0005886 ... P35096 N/A
    958795 9dwz:R (2.35) BS03 BCL N/A GO:0005886 ... P35096 N/A
    958796 9dwz:R (2.35) BS04 BCL N/A GO:0005886 ... P35096 N/A
    958797 9dx3:A (2.94) BS01 ADP N/A GO:0000400 ... P0A812 N/A
    958798 9dx3:B (2.94) BS01 ADP N/A GO:0000400 ... P0A812 N/A
    958799 9dx3:C (2.94) BS01 ADP N/A GO:0000400 ... P0A812 N/A
    958800 9dx3:D (2.94) BS01 ADP N/A GO:0000400 ... P0A812 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).