SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4785 4786 4787 4788 4789 4790 4791 4792 4793 4794 4795 4796 4797 4798 4799 4800 4801 4802 4803 4804 4805 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    958801 9dx3:E (2.94) BS01 ADP N/A GO:0000400 ... P0A812 N/A
    958802 9dx3:F (2.94) BS01 ADP N/A GO:0000400 ... P0A812 N/A
    958803 9dx3:G (2.94) BS01 ADP N/A GO:0000400 ... P0A812 N/A
    958804 9dx3:H (2.94) BS01 ADP N/A GO:0000400 ... P0A812 N/A
    958805 9dx4:A (3.31) BS01 ADP N/A GO:0000400 ... P0A812 N/A
    958806 9dx4:B (3.31) BS01 ADP N/A GO:0000400 ... P0A812 N/A
    958807 9dx4:C (3.31) BS01 ADP N/A GO:0000400 ... P0A812 N/A
    958808 9dx4:D (3.31) BS01 ADP N/A GO:0000400 ... P0A812 N/A
    958809 9dx4:E (3.31) BS01 ADP N/A GO:0000400 ... P0A812 N/A
    958810 9dx5:A (3.74) BS01 ADP N/A GO:0000400 ... P0A812 N/A
    958811 9dx8:A (1.679) BS01 MW7 N/A GO:0004497 ... Q2IU02 N/A
    958812 9dx8:A (1.679) BS02 HEM N/A GO:0004497 ... Q2IU02 N/A
    958813 9dx9:A (1.52) BS01 HEM N/A GO:0004497 ... Q2IU02 N/A
    958814 9dx9:A (1.52) BS02 5R0 N/A GO:0004497 ... Q2IU02 N/A
    958815 9dxb:A (1.74) BS01 peptide N/A GO:0005506 ... Q96SZ5 40404614
    958816 9dxb:A (1.74) BS02 CO N/A GO:0005506 ... Q96SZ5 40404614
    958817 9dxc:A (3.1) BS01 GTP N/A GO:0000226 ... Q2XVP4 39516196
    958818 9dxc:B (3.1) BS01 GDP N/A GO:0000226 ... P02554 39516196
    958819 9dxc:C (3.1) BS01 GTP N/A GO:0000226 ... Q2XVP4 39516196
    958820 9dxc:D (3.1) BS01 GDP N/A GO:0000226 ... P02554 39516196
    958821 9dxd:A (4.16) BS01 dna N/A GO:0000150 ... O32006
    O34850
    N/A
    958822 9dxd:A (4.16) BS02 dna N/A GO:0000150 ... O32006
    O34850
    N/A
    958823 9dxd:A (4.16) BS03 ZN N/A GO:0000150 ... O32006
    O34850
    N/A
    958824 9dxd:C (4.16) BS01 dna N/A GO:0000150 ... O32006
    O34850
    N/A
    958825 9dxd:C (4.16) BS02 dna N/A GO:0000150 ... O32006
    O34850
    N/A
    958826 9dxd:C (4.16) BS03 ZN N/A GO:0000150 ... O32006
    O34850
    N/A
    958827 9dxd:I (4.16) BS01 dna N/A GO:0000150 ... O32006
    O34850
    N/A
    958828 9dxd:I (4.16) BS02 dna N/A GO:0000150 ... O32006
    O34850
    N/A
    958829 9dxd:K (4.16) BS01 dna N/A GO:0000150 ... O32006
    O34850
    N/A
    958830 9dxd:K (4.16) BS02 dna N/A GO:0000150 ... O32006
    O34850
    N/A
    958831 9dxd:K (4.16) BS03 ZN N/A GO:0000150 ... O32006
    O34850
    N/A
    958832 9dxe:A (3.3) BS01 GTP N/A GO:0000226 ... Q2XVP4 39516196
    958833 9dxe:B (3.3) BS01 GDP N/A GO:0000226 ... P02554 39516196
    958834 9dxe:C (3.3) BS01 GTP N/A GO:0000226 ... Q2XVP4 39516196
    958835 9dxe:C (3.3) BS02 MG N/A GO:0000226 ... Q2XVP4 39516196
    958836 9dxe:D (3.3) BS01 GDP N/A GO:0000226 ... P02554 39516196
    958837 9dxf:A (4.16) BS01 dna N/A GO:0000150 ... O32006
    O34850
    N/A
    958838 9dxf:A (4.16) BS02 dna N/A GO:0000150 ... O32006
    O34850
    N/A
    958839 9dxf:A (4.16) BS03 ZN N/A GO:0000150 ... O32006
    O34850
    N/A
    958840 9dxf:C (4.16) BS01 dna N/A GO:0000150 ... O32006
    O34850
    N/A
    958841 9dxf:C (4.16) BS02 dna N/A GO:0000150 ... O32006
    O34850
    N/A
    958842 9dxf:C (4.16) BS03 ZN N/A GO:0000150 ... O32006
    O34850
    N/A
    958843 9dxf:I (4.16) BS01 dna N/A GO:0000150 ... O32006
    O34850
    N/A
    958844 9dxf:I (4.16) BS02 dna N/A GO:0000150 ... O32006
    O34850
    N/A
    958845 9dxf:I (4.16) BS03 ZN N/A GO:0000150 ... O32006
    O34850
    N/A
    958846 9dxf:K (4.16) BS01 dna N/A GO:0000150 ... O32006
    O34850
    N/A
    958847 9dxf:K (4.16) BS02 dna N/A GO:0000150 ... O32006
    O34850
    N/A
    958848 9dxf:K (4.16) BS03 ZN N/A GO:0000150 ... O32006
    O34850
    N/A
    958849 9dxg:A (6.61) BS01 dna N/A GO:0000150 ... O32006
    O34850
    N/A
    958850 9dxg:A (6.61) BS02 dna N/A GO:0000150 ... O32006
    O34850
    N/A
    958851 9dxg:A (6.61) BS03 dna N/A GO:0000150 ... O32006
    O34850
    N/A
    958852 9dxg:A (6.61) BS04 ZN N/A GO:0000150 ... O32006
    O34850
    N/A
    958853 9dxg:C (6.61) BS01 dna N/A GO:0000150 ... O32006
    O34850
    N/A
    958854 9dxg:C (6.61) BS02 dna N/A GO:0000150 ... O32006
    O34850
    N/A
    958855 9dxg:C (6.61) BS03 dna N/A GO:0000150 ... O32006
    O34850
    N/A
    958856 9dxg:C (6.61) BS04 ZN N/A GO:0000150 ... O32006
    O34850
    N/A
    958857 9dxh:A (4.69) BS01 dna N/A GO:0000150 ... O32006 N/A
    958858 9dxh:A (4.69) BS02 dna N/A GO:0000150 ... O32006 N/A
    958859 9dxh:A (4.69) BS03 ZN N/A GO:0000150 ... O32006 N/A
    958860 9dxh:C (4.69) BS01 dna N/A GO:0000150 ... O32006 N/A
    958861 9dxh:C (4.69) BS02 dna N/A GO:0000150 ... O32006 N/A
    958862 9dxh:C (4.69) BS03 ZN N/A GO:0000150 ... O32006 N/A
    958863 9dxh:I (4.69) BS01 dna N/A GO:0000150 ... O32006 N/A
    958864 9dxh:I (4.69) BS02 dna N/A GO:0000150 ... O32006 N/A
    958865 9dxh:I (4.69) BS03 ZN N/A GO:0000150 ... O32006 N/A
    958866 9dxh:K (4.69) BS01 dna N/A GO:0000150 ... O32006 N/A
    958867 9dxh:K (4.69) BS02 dna N/A GO:0000150 ... O32006 N/A
    958868 9dxh:K (4.69) BS03 ZN N/A GO:0000150 ... O32006 N/A
    958869 9dxj:A (4.69) BS01 dna N/A GO:0000150 ... O32006 N/A
    958870 9dxj:A (4.69) BS02 dna N/A GO:0000150 ... O32006 N/A
    958871 9dxj:A (4.69) BS03 ZN N/A GO:0000150 ... O32006 N/A
    958872 9dxj:C (4.69) BS01 dna N/A GO:0000150 ... O32006 N/A
    958873 9dxj:C (4.69) BS02 dna N/A GO:0000150 ... O32006 N/A
    958874 9dxj:C (4.69) BS03 ZN N/A GO:0000150 ... O32006 N/A
    958875 9dxj:I (4.69) BS01 dna N/A GO:0000150 ... O32006 N/A
    958876 9dxj:I (4.69) BS02 dna N/A GO:0000150 ... O32006 N/A
    958877 9dxj:I (4.69) BS03 ZN N/A GO:0000150 ... O32006 N/A
    958878 9dxj:K (4.69) BS01 dna N/A GO:0000150 ... O32006 N/A
    958879 9dxj:K (4.69) BS02 dna N/A GO:0000150 ... O32006 N/A
    958880 9dxj:K (4.69) BS03 ZN N/A GO:0000150 ... O32006 N/A
    958881 9dxk:A (4.81) BS01 dna N/A GO:0000150 ... O32006 N/A
    958882 9dxk:A (4.81) BS02 dna N/A GO:0000150 ... O32006 N/A
    958883 9dxk:A (4.81) BS03 ZN N/A GO:0000150 ... O32006 N/A
    958884 9dxk:C (4.81) BS01 dna N/A GO:0000150 ... O32006 N/A
    958885 9dxk:C (4.81) BS02 dna N/A GO:0000150 ... O32006 N/A
    958886 9dxk:C (4.81) BS03 ZN N/A GO:0000150 ... O32006 N/A
    958887 9dxk:I (4.81) BS01 dna N/A GO:0000150 ... O32006 N/A
    958888 9dxk:I (4.81) BS02 dna N/A GO:0000150 ... O32006 N/A
    958889 9dxk:I (4.81) BS03 ZN N/A GO:0000150 ... O32006 N/A
    958890 9dxk:K (4.81) BS01 dna N/A GO:0000150 ... O32006 N/A
    958891 9dxk:K (4.81) BS02 dna N/A GO:0000150 ... O32006 N/A
    958892 9dxk:K (4.81) BS03 ZN N/A GO:0000150 ... O32006 N/A
    958893 9dxm:B (3.2) BS01 GTP N/A GO:0003924 ... P32835 40089503
    958894 9dxm:B (3.2) BS02 MG N/A GO:0003924 ... P32835 40089503
    958895 9dxo:A (2.6) BS01 FY5 N/A GO:0005515 ... Q9NYB5 40680733
    958896 9dxo:A (2.6) BS02 FY5 N/A GO:0005515 ... Q9NYB5 40680733
    958897 9dxo:A (2.6) BS03 FY5 N/A GO:0005515 ... Q9NYB5 40680733
    958898 9dxp:A (2.3) BS01 T44 N/A GO:0005515 ... Q9NYB5 40680733
    958899 9dxp:A (2.3) BS02 Y01 N/A GO:0005515 ... Q9NYB5 40680733
    958900 9dxq:A (2.81) BS01 2J9 N/A GO:0005216 ... P42260 39592599
    958901 9dxq:A (2.81) BS02 2J9 N/A GO:0005216 ... P42260 39592599
    958902 9dxq:B (2.81) BS01 2J9 N/A GO:0005216 ... P42260 39592599
    958903 9dxq:B (2.81) BS02 2J9 N/A GO:0005216 ... P42260 39592599
    958904 9dxq:C (2.81) BS01 2J9 N/A GO:0005216 ... P42260 39592599
    958905 9dxq:C (2.81) BS02 2J9 N/A GO:0005216 ... P42260 39592599
    958906 9dxq:C (2.81) BS03 A1BDR N/A GO:0005216 ... P42260 39592599
    958907 9dxq:D (2.81) BS01 2J9 N/A GO:0005216 ... P42260 39592599
    958908 9dxq:D (2.81) BS02 2J9 N/A GO:0005216 ... P42260 39592599
    958909 9dxr:A (3.1) BS01 2J9 N/A GO:0005216 ... P42260 39592599
    958910 9dxr:A (3.1) BS02 2J9 N/A GO:0005216 ... P42260 39592599
    958911 9dxr:A (3.1) BS03 A1BDS N/A GO:0005216 ... P42260 39592599
    958912 9dxr:B (3.1) BS01 A1BDS N/A GO:0005216 ... P42260 39592599
    958913 9dxr:B (3.1) BS02 2J9 N/A GO:0005216 ... P42260 39592599
    958914 9dxr:B (3.1) BS03 2J9 N/A GO:0005216 ... P42260 39592599
    958915 9dxr:C (3.1) BS01 A1BDS N/A GO:0005216 ... P42260 39592599
    958916 9dxr:C (3.1) BS02 2J9 N/A GO:0005216 ... P42260 39592599
    958917 9dxr:C (3.1) BS03 2J9 N/A GO:0005216 ... P42260 39592599
    958918 9dxr:D (3.1) BS01 2J9 N/A GO:0005216 ... P42260 39592599
    958919 9dxr:D (3.1) BS02 2J9 N/A GO:0005216 ... P42260 39592599
    958920 9dxr:D (3.1) BS03 A1BDS N/A GO:0005216 ... P42260 39592599
    958921 9dxs:A (3.55) BS01 2J9 N/A GO:0005216 ... P42260 39592599
    958922 9dxs:A (3.55) BS02 SPM N/A GO:0005216 ... P42260 39592599
    958923 9dxs:A (3.55) BS03 2J9 N/A GO:0005216 ... P42260 39592599
    958924 9dxs:B (3.55) BS01 2J9 N/A GO:0005216 ... P42260 39592599
    958925 9dxs:B (3.55) BS02 2J9 N/A GO:0005216 ... P42260 39592599
    958926 9dxs:C (3.55) BS01 2J9 N/A GO:0005216 ... P42260 39592599
    958927 9dxs:C (3.55) BS02 2J9 N/A GO:0005216 ... P42260 39592599
    958928 9dxs:D (3.55) BS01 2J9 N/A GO:0005216 ... P42260 39592599
    958929 9dxs:D (3.55) BS02 2J9 N/A GO:0005216 ... P42260 39592599
    958930 9dxt:A (3.75) BS01 2J9 N/A GO:0005216 ... P42260 39592599
    958931 9dxt:A (3.75) BS02 2J9 N/A GO:0005216 ... P42260 39592599
    958932 9dxt:B (3.75) BS01 CLR N/A GO:0005216 ... P42260 39592599
    958933 9dxt:B (3.75) BS02 CLR N/A GO:0005216 ... P42260 39592599
    958934 9dxt:B (3.75) BS03 2J9 N/A GO:0005216 ... P42260 39592599
    958935 9dxt:B (3.75) BS04 CLR N/A GO:0005216 ... P42260 39592599
    958936 9dxt:B (3.75) BS05 2J9 N/A GO:0005216 ... P42260 39592599
    958937 9dxt:B (3.75) BS06 A1BDT N/A GO:0005216 ... P42260 39592599
    958938 9dxt:C (3.75) BS01 2J9 N/A GO:0005216 ... P42260 39592599
    958939 9dxt:C (3.75) BS02 2J9 N/A GO:0005216 ... P42260 39592599
    958940 9dxt:C (3.75) BS03 A1BDT N/A GO:0005216 ... P42260 39592599
    958941 9dxt:D (3.75) BS01 2J9 N/A GO:0005216 ... P42260 39592599
    958942 9dxt:D (3.75) BS02 2J9 N/A GO:0005216 ... P42260 39592599
    958943 9dxt:D (3.75) BS03 CLR N/A GO:0005216 ... P42260 39592599
    958944 9dxt:D (3.75) BS04 CLR N/A GO:0005216 ... P42260 39592599
    958945 9dxt:D (3.75) BS05 CLR N/A GO:0005216 ... P42260 39592599
    958946 9dxt:D (3.75) BS06 A1BDT N/A GO:0005216 ... P42260 39592599
    958947 9dxu:A (1.74) BS01 peptide N/A GO:0005506 ... Q96SZ5 40404614
    958948 9dxu:A (1.74) BS02 CO N/A GO:0005506 ... Q96SZ5 40404614
    958949 9dxv:A (1.6) BS01 peptide N/A GO:0005506 ... Q96SZ5 40404614
    958950 9dxv:A (1.6) BS02 CO N/A GO:0005506 ... Q96SZ5 40404614
    958951 9dxw:A (2.05) BS01 HEM N/A GO:0004497 ... Q2IU02 N/A
    958952 9dxw:A (2.05) BS02 5R0 N/A GO:0004497 ... Q2IU02 N/A
    958953 9dy3:A (1.3) BS01 ZN N/A GO:0030288 ... Q9HU18 N/A
    958954 9dy3:A (1.3) BS02 ZN N/A GO:0030288 ... Q9HU18 N/A
    958955 9dy3:A (1.3) BS03 ZN N/A GO:0030288 ... Q9HU18 N/A
    958956 9dy4:A (2.39) BS01 FE2 N/A GO:0005506 ... Q96SZ5 41091880
    958957 9dy4:A (2.39) BS02 HLZ N/A GO:0005506 ... Q96SZ5 41091880
    958958 9dy5:A (2.5) BS01 HEM N/A GO:0004497 ... Q2IU02 N/A
    958959 9dy5:A (2.5) BS02 4MI N/A GO:0004497 ... Q2IU02 N/A
    958960 9dy7:A (1.87) BS01 ESC N/A GO:0006520 ... P28796 40147499
    958961 9dy7:B (1.87) BS01 YAR N/A GO:0006520 ... P28796 40147499
    958962 9dy7:C (1.87) BS01 ESC N/A GO:0006520 ... P28796 40147499
    958963 9dy7:D (1.87) BS01 YAE N/A GO:0006520 ... P28796 40147499
    958964 9dy8:A (2.0) BS01 peptide N/A N/A S6AU73 40587260
    958965 9dy9:A (1.672) BS01 ANN N/A GO:0004497 ... Q2IU02 N/A
    958966 9dy9:A (1.672) BS02 HEM N/A GO:0004497 ... Q2IU02 N/A
    958967 9dya:A (1.89) BS01 peptide N/A N/A Q9UNE7 40027613
    958968 9dyb:A (1.6) BS01 peptide N/A N/A Q9UNE7 40027613
    958969 9dyc:A (2.2) BS01 HEM N/A GO:0004497 ... Q2IU02 N/A
    958970 9dyc:A (2.2) BS02 EGM N/A GO:0004497 ... Q2IU02 N/A
    958971 9dyd:R (2.96) BS01 A1BIR N/A GO:0001586 ... P08908
    P0ABE7
    40749070
    958972 9dyd:R (2.96) BS02 CLR N/A GO:0001586 ... P08908
    P0ABE7
    40749070
    958973 9dyd:R (2.96) BS03 CLR N/A GO:0001586 ... P08908
    P0ABE7
    40749070
    958974 9dyd:R (2.96) BS04 J40 N/A GO:0001586 ... P08908
    P0ABE7
    40749070
    958975 9dye:R (2.9) BS01 YLX N/A GO:0001586 ... P08908 40749070
    958976 9dye:R (2.9) BS02 CLR N/A GO:0001586 ... P08908 40749070
    958977 9dye:R (2.9) BS03 CLR N/A GO:0001586 ... P08908 40749070
    958978 9dye:R (2.9) BS04 J40 N/A GO:0001586 ... P08908 40749070
    958979 9dyf:R (2.74) BS01 A1BIR N/A GO:0001586 ... P08908
    P0ABE7
    40749070
    958980 9dyf:R (2.74) BS02 CLR N/A GO:0001586 ... P08908
    P0ABE7
    40749070
    958981 9dyf:R (2.74) BS03 CLR N/A GO:0001586 ... P08908
    P0ABE7
    40749070
    958982 9dyf:R (2.74) BS04 CLR N/A GO:0001586 ... P08908
    P0ABE7
    40749070
    958983 9dyf:R (2.74) BS05 J40 N/A GO:0001586 ... P08908
    P0ABE7
    40749070
    958984 9dyg:2 (5.27) BS01 rna N/A GO:0003735 ... P0A7P5 N/A
    958985 9dyg:D (5.27) BS01 rna N/A GO:0000027 ... P60438 N/A
    958986 9dyg:E (5.27) BS01 rna N/A GO:0001070 ... P60723 N/A
    958987 9dyg:J (5.27) BS01 rna N/A GO:0002181 ... P0AA10 N/A
    958988 9dyg:N (5.27) BS01 rna N/A GO:0000027 ... P0AG44 N/A
    958989 9dyg:P (5.27) BS01 rna N/A GO:0000027 ... P0A7K6 N/A
    958990 9dyg:Q (5.27) BS01 rna N/A GO:0000027 ... P0A7L3 N/A
    958991 9dyg:R (5.27) BS01 rna N/A GO:0002181 ... P0AG48 N/A
    958992 9dyg:S (5.27) BS01 rna N/A GO:0002181 ... P61175 N/A
    958993 9dyg:T (5.27) BS01 rna N/A GO:0000027 ... P0ADZ0 N/A
    958994 9dyg:U (5.27) BS01 rna N/A GO:0000027 ... P60624 N/A
    958995 9dyg:Y (5.27) BS01 rna N/A GO:0003735 ... C3SQY2 N/A
    958996 9dyh:A (3.15) BS01 CA N/A GO:0005217 ... Q8NFU1 39737942
    958997 9dyh:B (3.15) BS01 CA N/A GO:0005217 ... Q8NFU1 39737942
    958998 9dyh:C (3.15) BS01 CA N/A GO:0005217 ... Q8NFU1 39737942
    958999 9dyh:D (3.15) BS01 CA N/A GO:0005217 ... Q8NFU1 39737942
    959000 9dyh:E (3.15) BS01 CA N/A GO:0005217 ... Q8NFU1 39737942

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).