SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    9401 1dmc:A (-1.00) BS02 CD ? GO:0046872 ... P55949 7819257
    9402 1dmc:A (-1.00) BS03 CD ? GO:0046872 ... P55949 7819257
    9403 1dmd:A (-1.00) BS01 CD ? GO:0046872 ... P55949 7819257
    9404 1dmd:A (-1.00) BS02 CD ? GO:0046872 ... P55949 7819257
    9405 1dmd:A (-1.00) BS03 CD ? GO:0046872 ... P55949 7819257
    9406 1dmh:A (1.7) BS01 FE 1.13.11.1 GO:0003824 ... P07773 10801478
    9407 1dmh:A (1.7) BS02 MCT 1.13.11.1 GO:0003824 ... P07773 10801478
    9408 1dmh:B (1.7) BS01 FE 1.13.11.1 GO:0003824 ... P07773 10801478
    9409 1dmh:B (1.7) BS02 MCT 1.13.11.1 GO:0003824 ... P07773 10801478
    9410 1dmi:A (2.0) BS01 ZN 1.14.13.39 GO:0004517 ... P29473 N/A
    9411 1dmi:A (2.0) BS02 HEM 1.14.13.39 GO:0004517 ... P29473 N/A
    9412 1dmi:A (2.0) BS03 BHS 1.14.13.39 GO:0004517 ... P29473 N/A
    9413 1dmi:A (2.0) BS04 BHS 1.14.13.39 GO:0004517 ... P29473 N/A
    9414 1dmi:B (2.0) BS01 ZN 1.14.13.39 GO:0004517 ... P29473 N/A
    9415 1dmi:B (2.0) BS02 BHS 1.14.13.39 GO:0004517 ... P29473 N/A
    9416 1dmi:B (2.0) BS03 HEM 1.14.13.39 GO:0004517 ... P29473 N/A
    9417 1dmi:B (2.0) BS04 BHS 1.14.13.39 GO:0004517 ... P29473 N/A
    9418 1dmi:B (2.0) BS05 ITU 1.14.13.39 GO:0004517 ... P29473 N/A
    9419 1dmj:A (2.35) BS01 ZN 1.14.13.39 GO:0004517 ... P29473 11590164
    9420 1dmj:A (2.35) BS02 HEM 1.14.13.39 GO:0004517 ... P29473 11590164
    9421 1dmj:A (2.35) BS03 AP4 1.14.13.39 GO:0004517 ... P29473 11590164
    9422 1dmj:A (2.35) BS04 ITU 1.14.13.39 GO:0004517 ... P29473 11590164
    9423 1dmj:A (2.35) BS05 AP4 1.14.13.39 GO:0004517 ... P29473 11590164
    9424 1dmj:B (2.35) BS01 ZN 1.14.13.39 GO:0004517 ... P29473 11590164
    9425 1dmj:B (2.35) BS02 HEM 1.14.13.39 GO:0004517 ... P29473 11590164
    9426 1dmj:B (2.35) BS03 AP4 1.14.13.39 GO:0004517 ... P29473 11590164
    9427 1dmj:B (2.35) BS04 ITU 1.14.13.39 GO:0004517 ... P29473 11590164
    9428 1dmk:A (1.9) BS01 ZN 1.14.13.39 GO:0004517 ... P29473 11590164
    9429 1dmk:A (1.9) BS02 HEM 1.14.13.39 GO:0004517 ... P29473 11590164
    9430 1dmk:A (1.9) BS03 AP6 1.14.13.39 GO:0004517 ... P29473 11590164
    9431 1dmk:A (1.9) BS04 ITU 1.14.13.39 GO:0004517 ... P29473 11590164
    9432 1dmk:A (1.9) BS05 AP6 1.14.13.39 GO:0004517 ... P29473 11590164
    9433 1dmk:B (1.9) BS01 ZN 1.14.13.39 GO:0004517 ... P29473 11590164
    9434 1dmk:B (1.9) BS02 AP6 1.14.13.39 GO:0004517 ... P29473 11590164
    9435 1dmk:B (1.9) BS03 HEM 1.14.13.39 GO:0004517 ... P29473 11590164
    9436 1dmk:B (1.9) BS04 AP6 1.14.13.39 GO:0004517 ... P29473 11590164
    9437 1dmk:B (1.9) BS05 ITU 1.14.13.39 GO:0004517 ... P29473 11590164
    9438 1dmp:A (2.0) BS01 DMQ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P04585 8807858
    9439 1dmp:B (2.0) BS01 DMQ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P04585 8807858 MOAD: Ki=0.28nM
    9440 1dmr:A (1.82) BS01 PGD 1.7.2.3
    1.8.5.3
    GO:0016491 ... Q52675 N/A
    9441 1dmr:A (1.82) BS02 PGD 1.7.2.3
    1.8.5.3
    GO:0016491 ... Q52675 N/A
    9442 1dms:A (1.88) BS01 PGD 1.7.2.3
    1.8.5.3
    GO:0009055 ... Q52675 8890912
    9443 1dms:A (1.88) BS02 PGD 1.7.2.3
    1.8.5.3
    GO:0009055 ... Q52675 8890912
    9444 1dms:A (1.88) BS03 2MO 1.7.2.3
    1.8.5.3
    GO:0009055 ... Q52675 8890912
    9445 1dmt:A (2.1) BS01 ZN 3.4.24.11 GO:0001786 ... P08473 10669592
    9446 1dmt:A (2.1) BS02 RDF 3.4.24.11 GO:0001786 ... P08473 10669592 BindingDB: IC50=30nM
    9447 1dmu:A (2.2) BS01 dna 3.1.21.4 GO:0009036 ... O68557 9736624
    9448 1dmu:A (2.2) BS02 CA 3.1.21.4 GO:0009036 ... O68557 9736624
    9449 1dmu:A (2.2) BS03 CA 3.1.21.4 GO:0009036 ... O68557 9736624
    9450 1dmw:A (2.0) BS01 FE 1.14.16.1 GO:0004497 ... P00439 10694386
    9451 1dmw:A (2.0) BS02 HBI 1.14.16.1 GO:0004497 ... P00439 10694386
    9452 1dmx:A (2.45) BS01 ZN 4.2.1.1 GO:0004089 ... P23589 7479916
    9453 1dmx:B (2.45) BS01 ZN 4.2.1.1 GO:0004089 ... P23589 7479916
    9454 1dmy:A (2.45) BS01 ZN 4.2.1.1 GO:0004089 ... P23589 7479916
    9455 1dmy:A (2.45) BS02 AZM 4.2.1.1 GO:0004089 ... P23589 7479916 BindingDB: Ki=60nM
    9456 1dmy:B (2.45) BS01 ZN 4.2.1.1 GO:0004089 ... P23589 7479916
    9457 1dmy:B (2.45) BS02 AZM 4.2.1.1 GO:0004089 ... P23589 7479916 BindingDB: Ki=60nM
    9458 1dn2:A (2.7) BS01 peptide ? N/A P01857 10678837
    9459 1dn2:A (2.7) BS02 BMA ? N/A P01857 10678837
    9460 1dn2:A (2.7) BS03 GAL ? N/A P01857 10678837
    9461 1dn2:B (2.7) BS01 peptide ? N/A P01857 10678837
    9462 1dn2:B (2.7) BS02 BMA ? N/A P01857 10678837
    9463 1dn2:B (2.7) BS03 GAL ? N/A P01857 10678837
    9464 1dna:A (2.2) BS01 UMP 2.1.1.45 GO:0000287 ... P0A884 9753479
    9465 1dna:A (2.2) BS02 UMP 2.1.1.45 GO:0000287 ... P0A884 9753479
    9466 1dna:B (2.2) BS01 UMP 2.1.1.45 GO:0000287 ... P0A884 9753479
    9467 1dna:B (2.2) BS02 UMP 2.1.1.45 GO:0000287 ... P0A884 9753479
    9468 1dnc:A (1.7) BS01 FAD 1.8.1.7 GO:0004362 ... P00390 9546215
    9469 1dnc:A (1.7) BS02 GSH 1.8.1.7 GO:0004362 ... P00390 9546215
    9470 1dnk:A (2.3) BS01 dna 3.1.21.1 GO:0002283 ... P00639 1518054
    9471 1dnk:A (2.3) BS02 dna 3.1.21.1 GO:0002283 ... P00639 1518054
    9472 1dnl:A (1.8) BS01 PO4 1.4.3.5 GO:0004733 ... P0AFI7 10903950
    9473 1dnl:A (1.8) BS02 FMN 1.4.3.5 GO:0004733 ... P0AFI7 10903950
    9474 1dnp:A (2.3) BS01 FAD 4.1.99.3 GO:0000719 ... P00914 7604260
    9475 1dnp:A (2.3) BS02 MHF 4.1.99.3 GO:0000719 ... P00914 7604260
    9476 1dnp:B (2.3) BS01 FAD 4.1.99.3 GO:0000719 ... P00914 7604260
    9477 1dnp:B (2.3) BS02 MHF 4.1.99.3 GO:0000719 ... P00914 7604260
    9478 1dnu:A (1.85) BS01 HEM 1.11.2.2 GO:0004601 ... P05164 11705390
    9479 1dnu:B (1.85) BS01 HEM 1.11.2.2 GO:0004601 ... P05164 11705390
    9480 1dnu:C (1.85) BS01 MAN 1.11.2.2 GO:0004601 ... P05164 11705390
    9481 1dnu:C (1.85) BS02 SCN 1.11.2.2 GO:0004601 ... P05164 11705390
    9482 1dnu:C (1.85) BS03 SCN 1.11.2.2 GO:0004601 ... P05164 11705390
    9483 1dnu:C (1.85) BS04 CA 1.11.2.2 GO:0004601 ... P05164 11705390
    9484 1dnu:C (1.85) BS05 HEM 1.11.2.2 GO:0004601 ... P05164 11705390
    9485 1dnu:D (1.85) BS01 MAN 1.11.2.2 GO:0004601 ... P05164 11705390
    9486 1dnu:D (1.85) BS02 SCN 1.11.2.2 GO:0004601 ... P05164 11705390
    9487 1dnu:D (1.85) BS03 SCN 1.11.2.2 GO:0004601 ... P05164 11705390
    9488 1dnu:D (1.85) BS04 HEM 1.11.2.2 GO:0004601 ... P05164 11705390
    9489 1dnu:D (1.85) BS05 CA 1.11.2.2 GO:0004601 ... P05164 11705390
    9490 1dnw:A (1.9) BS01 CYN 1.11.2.2 GO:0004601 ... P05164 11705390
    9491 1dnw:A (1.9) BS02 HEM 1.11.2.2 GO:0004601 ... P05164 11705390
    9492 1dnw:B (1.9) BS01 HEM 1.11.2.2 GO:0004601 ... P05164 11705390
    9493 1dnw:C (1.9) BS01 FUC 1.11.2.2 GO:0004601 ... P05164 11705390
    9494 1dnw:C (1.9) BS02 MAN 1.11.2.2 GO:0004601 ... P05164 11705390
    9495 1dnw:C (1.9) BS03 SCN 1.11.2.2 GO:0004601 ... P05164 11705390
    9496 1dnw:C (1.9) BS04 CA 1.11.2.2 GO:0004601 ... P05164 11705390
    9497 1dnw:C (1.9) BS05 SCN 1.11.2.2 GO:0004601 ... P05164 11705390
    9498 1dnw:C (1.9) BS06 HEM 1.11.2.2 GO:0004601 ... P05164 11705390
    9499 1dnw:D (1.9) BS01 MAN 1.11.2.2 GO:0004601 ... P05164 11705390
    9500 1dnw:D (1.9) BS02 SCN 1.11.2.2 GO:0004601 ... P05164 11705390
    9501 1dnw:D (1.9) BS03 SCN 1.11.2.2 GO:0004601 ... P05164 11705390
    9502 1dnw:D (1.9) BS04 HEM 1.11.2.2 GO:0004601 ... P05164 11705390
    9503 1dnw:D (1.9) BS05 CA 1.11.2.2 GO:0004601 ... P05164 11705390
    9504 1do0:A (3.0) BS01 ATP ? GO:0000287 ... P0A6H5 10693812
    9505 1do0:B (3.0) BS01 ATP ? GO:0000287 ... P0A6H5 10693812
    9506 1do0:D (3.0) BS01 ATP ? GO:0000287 ... P0A6H5 10693812
    9507 1do0:E (3.0) BS01 ATP ? GO:0000287 ... P0A6H5 10693812
    9508 1do1:A (1.5) BS01 GLC 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 10724176
    9509 1do1:A (1.5) BS02 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 10724176
    9510 1do2:A (4.0) BS01 ANP ? GO:0000287 ... P0A6H5 10693812
    9511 1do2:C (4.0) BS01 ANP ? GO:0000287 ... P0A6H5 10693812
    9512 1do3:A (1.55) BS01 GLC 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 10724176
    9513 1do3:A (1.55) BS02 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 10724176
    9514 1do4:A (1.7) BS01 GLC 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 10724176
    9515 1do4:A (1.7) BS02 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 10724176
    9516 1do5:A (2.75) BS01 ZN ? GO:0005507 ... O14618 10677207
    9517 1do5:B (2.75) BS01 ZN ? GO:0005507 ... O14618 10677207
    9518 1do5:C (2.75) BS01 ZN ? GO:0005507 ... O14618 10677207
    9519 1do5:D (2.75) BS01 ZN ? GO:0005507 ... O14618 10677207
    9520 1do6:A (2.0) BS01 FE 1.15.1.2 GO:0005506 ... P82385 10704199
    9521 1do6:B (2.0) BS01 FE 1.15.1.2 GO:0005506 ... P82385 10704199
    9522 1do7:A (1.85) BS01 GLC 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 10724176
    9523 1do7:A (1.85) BS02 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 10724176
    9524 1do8:A (2.2) BS01 OXL 1.1.1.38 GO:0004470 ... P23368 10700286
    9525 1do8:A (2.2) BS02 MN 1.1.1.38 GO:0004470 ... P23368 10700286
    9526 1do8:A (2.2) BS03 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    9527 1do8:A (2.2) BS04 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    9528 1do8:B (2.2) BS01 OXL 1.1.1.38 GO:0004470 ... P23368 10700286
    9529 1do8:B (2.2) BS02 MN 1.1.1.38 GO:0004470 ... P23368 10700286
    9530 1do8:B (2.2) BS03 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    9531 1do8:B (2.2) BS04 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    9532 1do8:C (2.2) BS01 OXL 1.1.1.38 GO:0004470 ... P23368 10700286
    9533 1do8:C (2.2) BS02 MN 1.1.1.38 GO:0004470 ... P23368 10700286
    9534 1do8:C (2.2) BS03 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    9535 1do8:C (2.2) BS04 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    9536 1do8:D (2.2) BS01 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    9537 1do8:D (2.2) BS02 OXL 1.1.1.38 GO:0004470 ... P23368 10700286
    9538 1do8:D (2.2) BS03 MN 1.1.1.38 GO:0004470 ... P23368 10700286
    9539 1do8:D (2.2) BS04 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    9540 1do8:D (2.2) BS05 NAD 1.1.1.38 GO:0004470 ... P23368 10700286
    9541 1do9:A (-1.00) BS01 HEM ? GO:0020037 ... P00169 10651812
    9542 1doa:A (2.6) BS01 MG 3.6.5.2 GO:0000139 ... P60953 10676816
    9543 1doa:A (2.6) BS02 GDP 3.6.5.2 GO:0000139 ... P60953 10676816
    9544 1doa:A (2.6) BS03 GER 3.6.5.2 GO:0000139 ... P60953 10676816
    9545 1doa:B (2.6) BS01 GER ? GO:0001772 ... P19803 10676816
    9546 1dob:A (2.0) BS01 FAD 1.14.13.2 GO:0016491 ... P20586 7939628
    9547 1doc:A (2.0) BS01 FAD 1.14.13.2 GO:0016491 ... P20586 7939628
    9548 1dod:A (2.1) BS01 FAD 1.14.13.2 GO:0016491 ... P20586 7939628
    9549 1dod:A (2.1) BS02 DOB 1.14.13.2 GO:0016491 ... P20586 7939628
    9550 1doe:A (2.3) BS01 FAD 1.14.13.2 GO:0016491 ... P20586 7939628
    9551 1doe:A (2.3) BS02 DOB 1.14.13.2 GO:0016491 ... P20586 7939628
    9552 1dog:A (2.3) BS01 MAN 3.2.1.3 GO:0004339 ... P69327 8431441
    9553 1dog:A (2.3) BS02 MAN 3.2.1.3 GO:0004339 ... P69327 8431441
    9554 1dog:A (2.3) BS03 MAN 3.2.1.3 GO:0004339 ... P69327 8431441
    9555 1dog:A (2.3) BS04 MAN 3.2.1.3 GO:0004339 ... P69327 8431441
    9556 1dog:A (2.3) BS05 MAN 3.2.1.3 GO:0004339 ... P69327 8431441
    9557 1dog:A (2.3) BS06 MAN 3.2.1.3 GO:0004339 ... P69327 8431441
    9558 1dog:A (2.3) BS07 MAN 3.2.1.3 GO:0004339 ... P69327 8431441
    9559 1dog:A (2.3) BS08 MAN 3.2.1.3 GO:0004339 ... P69327 8431441
    9560 1dog:A (2.3) BS09 MAN 3.2.1.3 GO:0004339 ... P69327 8431441
    9561 1dog:A (2.3) BS10 MAN 3.2.1.3 GO:0004339 ... P69327 8431441
    9562 1dog:A (2.3) BS11 NOJ 3.2.1.3 GO:0004339 ... P69327 8431441 MOAD: Ki=96uM
    9563 1dog:A (2.3) BS12 NOJ 3.2.1.3 GO:0004339 ... P69327 8431441 MOAD: Ki=96uM
    9564 1doh:A (2.1) BS01 NDP 1.1.1.252 GO:0042438 ... Q12634 11342131
    9565 1doh:A (2.1) BS02 NID 1.1.1.252 GO:0042438 ... Q12634 11342131 MOAD: Ki=2.4nM
    9566 1doh:B (2.1) BS01 NDP 1.1.1.252 GO:0042438 ... Q12634 11342131
    9567 1doh:B (2.1) BS02 NID 1.1.1.252 GO:0042438 ... Q12634 11342131 MOAD: Ki=2.4nM
    9568 1doi:A (1.9) BS01 FES ? GO:0051536 ... P00217 8612076
    9569 1doj:A (1.7) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 11053836
    9570 1doj:A (1.7) BS02 1Z0 3.4.21.5 GO:0004252 ... P00734 11053836
    9571 1dor:A (2.0) BS01 FMN 1.3.98.1 GO:0004152 ... A2RJT9 9032071
    9572 1dor:B (2.0) BS01 FMN 1.3.98.1 GO:0004152 ... A2RJT9 9032071
    9573 1dos:A (1.67) BS01 ZN 4.1.2.13 GO:0004332 ... P0AB71 8836102
    9574 1dos:B (1.67) BS01 ZN 4.1.2.13 GO:0004332 ... P0AB71 8836102
    9575 1dot:A (2.35) BS01 FE ? GO:0005576 ... P56410 15299626
    9576 1dot:A (2.35) BS02 FE ? GO:0005576 ... P56410 15299626
    9577 1dot:A (2.35) BS03 CO3 ? GO:0005576 ... P56410 15299626
    9578 1dot:A (2.35) BS04 CO3 ? GO:0005576 ... P56410 15299626
    9579 1dox:A (-1.00) BS01 FES ? GO:0005515 ... P27320 7578051
    9580 1doy:A (-1.00) BS01 FES ? GO:0005515 ... P27320 7578051
    9581 1dp0:A (1.7) BS01 MG 3.2.1.23 GO:0000287 ... P00722 11045615
    9582 1dp0:A (1.7) BS02 MG 3.2.1.23 GO:0000287 ... P00722 11045615
    9583 1dp0:B (1.7) BS01 MG 3.2.1.23 GO:0000287 ... P00722 11045615
    9584 1dp0:B (1.7) BS02 MG 3.2.1.23 GO:0000287 ... P00722 11045615
    9585 1dp0:C (1.7) BS01 MG 3.2.1.23 GO:0000287 ... P00722 11045615
    9586 1dp0:C (1.7) BS02 MG 3.2.1.23 GO:0000287 ... P00722 11045615
    9587 1dp0:D (1.7) BS01 MG 3.2.1.23 GO:0000287 ... P00722 11045615
    9588 1dp0:D (1.7) BS02 MG 3.2.1.23 GO:0000287 ... P00722 11045615
    9589 1dp4:A (2.0) BS01 CL 4.6.1.2 GO:0016020 ... P18910 10894551
    9590 1dp4:C (2.0) BS01 CL 4.6.1.2 GO:0016020 ... P18910 10894551
    9591 1dp5:A (2.2) BS01 BMA 3.4.23.25 GO:0000324 ... P07267 10655612
    9592 1dp6:A (2.3) BS01 OXY 2.7.13.3 GO:0006355 ... P23222 10747783
    9593 1dp6:A (2.3) BS02 HEM 2.7.13.3 GO:0006355 ... P23222 10747783
    9594 1dp7:P (1.5) BS01 dna ? GO:0003677 ... P22670 10706293
    9595 1dp8:A (2.5) BS01 HEM 2.7.13.3 GO:0006355 ... P23222 10747783
    9596 1dp9:A (2.6) BS01 IMD 2.7.13.3 GO:0006355 ... P23222 10747783
    9597 1dp9:A (2.6) BS02 HEM 2.7.13.3 GO:0006355 ... P23222 10747783
    9598 1dpf:A (2.0) BS01 GDP 3.6.5.2 GO:0000281 ... P61586 10748207
    9599 1dpg:A (2.0) BS01 PO4 1.1.1.363 GO:0004345 ... P11411 7881907
    9600 1dpg:A (2.0) BS02 PO4 1.1.1.363 GO:0004345 ... P11411 7881907

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).