SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    960401 9e1o:C (3.3) BS01 dna N/A GO:0000786 ... P06897 40175616
    960402 9e1o:C (3.3) BS02 dna N/A GO:0000786 ... P06897 40175616
    960403 9e1o:D (3.3) BS01 dna N/A GO:0000786 ... P02281 40175616
    960404 9e1o:D (3.3) BS02 dna N/A GO:0000786 ... P02281 40175616
    960405 9e1o:E (3.3) BS01 dna N/A GO:0000786 ... P84233 40175616
    960406 9e1o:E (3.3) BS02 dna N/A GO:0000786 ... P84233 40175616
    960407 9e1o:F (3.3) BS01 dna N/A GO:0000786 ... P62799 40175616
    960408 9e1o:F (3.3) BS02 dna N/A GO:0000786 ... P62799 40175616
    960409 9e1o:G (3.3) BS01 dna N/A GO:0000786 ... P06897 40175616
    960410 9e1o:G (3.3) BS02 dna N/A GO:0000786 ... P06897 40175616
    960411 9e1o:H (3.3) BS01 dna N/A GO:0000786 ... P02281 40175616
    960412 9e1o:H (3.3) BS02 dna N/A GO:0000786 ... P02281 40175616
    960413 9e1o:W (3.3) BS01 dna N/A GO:0000183 ... O60264 40175616
    960414 9e1o:W (3.3) BS02 dna N/A GO:0000183 ... O60264 40175616
    960415 9e1o:W (3.3) BS03 ADP N/A GO:0000183 ... O60264 40175616
    960416 9e1p:A (3.25) BS01 dna N/A GO:0000786 ... P84233 40175616
    960417 9e1p:A (3.25) BS02 dna N/A GO:0000786 ... P84233 40175616
    960418 9e1p:B (3.25) BS01 dna N/A GO:0000786 ... P62799 40175616
    960419 9e1p:B (3.25) BS02 dna N/A GO:0000786 ... P62799 40175616
    960420 9e1p:C (3.25) BS01 dna N/A GO:0000786 ... P06897 40175616
    960421 9e1p:C (3.25) BS02 dna N/A GO:0000786 ... P06897 40175616
    960422 9e1p:D (3.25) BS01 dna N/A GO:0000786 ... P02281 40175616
    960423 9e1p:D (3.25) BS02 dna N/A GO:0000786 ... P02281 40175616
    960424 9e1p:E (3.25) BS01 dna N/A GO:0000786 ... P84233 40175616
    960425 9e1p:E (3.25) BS02 dna N/A GO:0000786 ... P84233 40175616
    960426 9e1p:F (3.25) BS01 dna N/A GO:0000786 ... P62799 40175616
    960427 9e1p:F (3.25) BS02 dna N/A GO:0000786 ... P62799 40175616
    960428 9e1p:G (3.25) BS01 dna N/A GO:0000786 ... P06897 40175616
    960429 9e1p:G (3.25) BS02 dna N/A GO:0000786 ... P06897 40175616
    960430 9e1p:H (3.25) BS01 dna N/A GO:0000786 ... P02281 40175616
    960431 9e1p:H (3.25) BS02 dna N/A GO:0000786 ... P02281 40175616
    960432 9e1p:W (3.25) BS01 dna N/A GO:0000183 ... O60264 40175616
    960433 9e1p:W (3.25) BS02 dna N/A GO:0000183 ... O60264 40175616
    960434 9e1p:W (3.25) BS03 ADP N/A GO:0000183 ... O60264 40175616
    960435 9e1q:A (3.1) BS01 dna N/A GO:0000786 ... P84233 40175616
    960436 9e1q:A (3.1) BS02 dna N/A GO:0000786 ... P84233 40175616
    960437 9e1q:B (3.1) BS01 dna N/A GO:0000786 ... P62799 40175616
    960438 9e1q:B (3.1) BS02 dna N/A GO:0000786 ... P62799 40175616
    960439 9e1q:C (3.1) BS01 dna N/A GO:0000786 ... P06897 40175616
    960440 9e1q:C (3.1) BS02 dna N/A GO:0000786 ... P06897 40175616
    960441 9e1q:D (3.1) BS01 dna N/A GO:0000786 ... P02281 40175616
    960442 9e1q:D (3.1) BS02 dna N/A GO:0000786 ... P02281 40175616
    960443 9e1q:E (3.1) BS01 dna N/A GO:0000786 ... P84233 40175616
    960444 9e1q:E (3.1) BS02 dna N/A GO:0000786 ... P84233 40175616
    960445 9e1q:F (3.1) BS01 dna N/A GO:0000786 ... P62799 40175616
    960446 9e1q:F (3.1) BS02 dna N/A GO:0000786 ... P62799 40175616
    960447 9e1q:G (3.1) BS01 dna N/A GO:0000786 ... P06897 40175616
    960448 9e1q:G (3.1) BS02 dna N/A GO:0000786 ... P06897 40175616
    960449 9e1q:H (3.1) BS01 dna N/A GO:0000786 ... P02281 40175616
    960450 9e1q:H (3.1) BS02 dna N/A GO:0000786 ... P02281 40175616
    960451 9e1q:W (3.1) BS01 dna N/A GO:0000183 ... O60264 40175616
    960452 9e1q:W (3.1) BS02 dna N/A GO:0000183 ... O60264 40175616
    960453 9e1q:W (3.1) BS03 ADP N/A GO:0000183 ... O60264 40175616
    960454 9e1r:A (3.1) BS01 dna N/A GO:0000786 ... P84233 40175616
    960455 9e1r:A (3.1) BS02 dna N/A GO:0000786 ... P84233 40175616
    960456 9e1r:B (3.1) BS01 dna N/A GO:0000786 ... P62799 40175616
    960457 9e1r:B (3.1) BS02 dna N/A GO:0000786 ... P62799 40175616
    960458 9e1r:C (3.1) BS01 dna N/A GO:0000786 ... P06897 40175616
    960459 9e1r:C (3.1) BS02 dna N/A GO:0000786 ... P06897 40175616
    960460 9e1r:D (3.1) BS01 dna N/A GO:0000786 ... P02281 40175616
    960461 9e1r:D (3.1) BS02 dna N/A GO:0000786 ... P02281 40175616
    960462 9e1r:E (3.1) BS01 dna N/A GO:0000786 ... P84233 40175616
    960463 9e1r:E (3.1) BS02 dna N/A GO:0000786 ... P84233 40175616
    960464 9e1r:F (3.1) BS01 dna N/A GO:0000786 ... P62799 40175616
    960465 9e1r:F (3.1) BS02 dna N/A GO:0000786 ... P62799 40175616
    960466 9e1r:G (3.1) BS01 dna N/A GO:0000786 ... P06897 40175616
    960467 9e1r:G (3.1) BS02 dna N/A GO:0000786 ... P06897 40175616
    960468 9e1r:H (3.1) BS01 dna N/A GO:0000786 ... P02281 40175616
    960469 9e1r:H (3.1) BS02 dna N/A GO:0000786 ... P02281 40175616
    960470 9e1r:W (3.1) BS01 dna N/A GO:0000183 ... O60264 40175616
    960471 9e1r:W (3.1) BS02 dna N/A GO:0000183 ... O60264 40175616
    960472 9e1r:W (3.1) BS03 ADP N/A GO:0000183 ... O60264 40175616
    960473 9e1t:A (3.0) BS01 MN N/A GO:0000139 ... O95461 41073435
    960474 9e1t:A (3.0) BS02 UDP N/A GO:0000139 ... O95461 41073435
    960475 9e1t:B (3.0) BS01 MN N/A GO:0000139 ... O95461 41073435
    960476 9e1t:B (3.0) BS02 UDP N/A GO:0000139 ... O95461 41073435
    960477 9e1u:A (3.1) BS01 dna N/A GO:0000786 ... P84233 40175616
    960478 9e1u:A (3.1) BS02 dna N/A GO:0000786 ... P84233 40175616
    960479 9e1u:B (3.1) BS01 dna N/A GO:0000786 ... P62799 40175616
    960480 9e1u:B (3.1) BS02 dna N/A GO:0000786 ... P62799 40175616
    960481 9e1u:C (3.1) BS01 dna N/A GO:0000786 ... P06897 40175616
    960482 9e1u:C (3.1) BS02 dna N/A GO:0000786 ... P06897 40175616
    960483 9e1u:D (3.1) BS01 dna N/A GO:0000786 ... P02281 40175616
    960484 9e1u:D (3.1) BS02 dna N/A GO:0000786 ... P02281 40175616
    960485 9e1u:E (3.1) BS01 dna N/A GO:0000786 ... P84233 40175616
    960486 9e1u:E (3.1) BS02 dna N/A GO:0000786 ... P84233 40175616
    960487 9e1u:F (3.1) BS01 dna N/A GO:0000786 ... P62799 40175616
    960488 9e1u:F (3.1) BS02 dna N/A GO:0000786 ... P62799 40175616
    960489 9e1u:G (3.1) BS01 dna N/A GO:0000786 ... P06897 40175616
    960490 9e1u:G (3.1) BS02 dna N/A GO:0000786 ... P06897 40175616
    960491 9e1u:H (3.1) BS01 dna N/A GO:0000786 ... P02281 40175616
    960492 9e1u:H (3.1) BS02 dna N/A GO:0000786 ... P02281 40175616
    960493 9e1u:W (3.1) BS01 dna N/A GO:0000183 ... O60264 40175616
    960494 9e1u:W (3.1) BS02 dna N/A GO:0000183 ... O60264 40175616
    960495 9e1u:W (3.1) BS03 ADP N/A GO:0000183 ... O60264 40175616
    960496 9e1v:A (3.1) BS01 dna N/A GO:0000786 ... P84233 40175616
    960497 9e1v:A (3.1) BS02 dna N/A GO:0000786 ... P84233 40175616
    960498 9e1v:B (3.1) BS01 dna N/A GO:0000786 ... P62799 40175616
    960499 9e1v:B (3.1) BS02 dna N/A GO:0000786 ... P62799 40175616
    960500 9e1v:C (3.1) BS01 dna N/A GO:0000786 ... P06897 40175616
    960501 9e1v:C (3.1) BS02 dna N/A GO:0000786 ... P06897 40175616
    960502 9e1v:D (3.1) BS01 dna N/A GO:0000786 ... P02281 40175616
    960503 9e1v:D (3.1) BS02 dna N/A GO:0000786 ... P02281 40175616
    960504 9e1v:E (3.1) BS01 dna N/A GO:0000786 ... P84233 40175616
    960505 9e1v:E (3.1) BS02 dna N/A GO:0000786 ... P84233 40175616
    960506 9e1v:F (3.1) BS01 dna N/A GO:0000786 ... P62799 40175616
    960507 9e1v:F (3.1) BS02 dna N/A GO:0000786 ... P62799 40175616
    960508 9e1v:G (3.1) BS01 dna N/A GO:0000786 ... P06897 40175616
    960509 9e1v:G (3.1) BS02 dna N/A GO:0000786 ... P06897 40175616
    960510 9e1v:H (3.1) BS01 dna N/A GO:0000786 ... P02281 40175616
    960511 9e1v:H (3.1) BS02 dna N/A GO:0000786 ... P02281 40175616
    960512 9e1v:W (3.1) BS01 dna N/A GO:0000183 ... O60264 40175616
    960513 9e1v:W (3.1) BS02 dna N/A GO:0000183 ... O60264 40175616
    960514 9e1v:W (3.1) BS03 ADP N/A GO:0000183 ... O60264 40175616
    960515 9e1w:A (3.2) BS01 dna N/A GO:0000786 ... P84233 40175616
    960516 9e1w:A (3.2) BS02 dna N/A GO:0000786 ... P84233 40175616
    960517 9e1w:B (3.2) BS01 dna N/A GO:0000786 ... P62799 40175616
    960518 9e1w:B (3.2) BS02 dna N/A GO:0000786 ... P62799 40175616
    960519 9e1w:C (3.2) BS01 dna N/A GO:0000786 ... P06897 40175616
    960520 9e1w:C (3.2) BS02 dna N/A GO:0000786 ... P06897 40175616
    960521 9e1w:D (3.2) BS01 dna N/A GO:0000786 ... P02281 40175616
    960522 9e1w:D (3.2) BS02 dna N/A GO:0000786 ... P02281 40175616
    960523 9e1w:E (3.2) BS01 dna N/A GO:0000786 ... P84233 40175616
    960524 9e1w:E (3.2) BS02 dna N/A GO:0000786 ... P84233 40175616
    960525 9e1w:F (3.2) BS01 dna N/A GO:0000786 ... P62799 40175616
    960526 9e1w:F (3.2) BS02 dna N/A GO:0000786 ... P62799 40175616
    960527 9e1w:G (3.2) BS01 dna N/A GO:0000786 ... P06897 40175616
    960528 9e1w:G (3.2) BS02 dna N/A GO:0000786 ... P06897 40175616
    960529 9e1w:H (3.2) BS01 dna N/A GO:0000786 ... P02281 40175616
    960530 9e1w:H (3.2) BS02 dna N/A GO:0000786 ... P02281 40175616
    960531 9e1w:W (3.2) BS01 dna N/A GO:0000183 ... O60264 40175616
    960532 9e1w:W (3.2) BS02 dna N/A GO:0000183 ... O60264 40175616
    960533 9e1w:W (3.2) BS03 ADP N/A GO:0000183 ... O60264 40175616
    960534 9e1x:A (3.4) BS01 dna N/A GO:0000786 ... P84233 40175616
    960535 9e1x:A (3.4) BS02 dna N/A GO:0000786 ... P84233 40175616
    960536 9e1x:B (3.4) BS01 dna N/A GO:0000786 ... P62799 40175616
    960537 9e1x:B (3.4) BS02 dna N/A GO:0000786 ... P62799 40175616
    960538 9e1x:C (3.4) BS01 dna N/A GO:0000786 ... Q6AZJ8 40175616
    960539 9e1x:C (3.4) BS02 dna N/A GO:0000786 ... Q6AZJ8 40175616
    960540 9e1x:D (3.4) BS01 dna N/A GO:0000786 ... P02281 40175616
    960541 9e1x:D (3.4) BS02 dna N/A GO:0000786 ... P02281 40175616
    960542 9e1x:E (3.4) BS01 dna N/A GO:0000786 ... P84233 40175616
    960543 9e1x:E (3.4) BS02 dna N/A GO:0000786 ... P84233 40175616
    960544 9e1x:F (3.4) BS01 dna N/A GO:0000786 ... P62799 40175616
    960545 9e1x:F (3.4) BS02 dna N/A GO:0000786 ... P62799 40175616
    960546 9e1x:G (3.4) BS01 dna N/A GO:0000786 ... Q6AZJ8 40175616
    960547 9e1x:G (3.4) BS02 dna N/A GO:0000786 ... Q6AZJ8 40175616
    960548 9e1x:H (3.4) BS01 dna N/A GO:0000786 ... P02281 40175616
    960549 9e1x:H (3.4) BS02 dna N/A GO:0000786 ... P02281 40175616
    960550 9e1x:W (3.4) BS01 dna N/A GO:0000183 ... O60264 40175616
    960551 9e1x:W (3.4) BS02 dna N/A GO:0000183 ... O60264 40175616
    960552 9e1x:W (3.4) BS03 ADP N/A GO:0000183 ... O60264 40175616
    960553 9e1y:A (2.6) BS01 dna N/A GO:0000786 ... P84233 39803580
    960554 9e1y:A (2.6) BS02 dna N/A GO:0000786 ... P84233 39803580
    960555 9e1y:B (2.6) BS01 dna N/A GO:0000786 ... P62799 39803580
    960556 9e1y:B (2.6) BS02 dna N/A GO:0000786 ... P62799 39803580
    960557 9e1y:C (2.6) BS01 dna N/A GO:0000786 ... P06897 39803580
    960558 9e1y:C (2.6) BS02 dna N/A GO:0000786 ... P06897 39803580
    960559 9e1y:D (2.6) BS01 dna N/A GO:0000786 ... P02281 39803580
    960560 9e1y:D (2.6) BS02 dna N/A GO:0000786 ... P02281 39803580
    960561 9e1y:E (2.6) BS01 dna N/A GO:0000786 ... P84233 39803580
    960562 9e1y:E (2.6) BS02 dna N/A GO:0000786 ... P84233 39803580
    960563 9e1y:F (2.6) BS01 dna N/A GO:0000786 ... P62799 39803580
    960564 9e1y:F (2.6) BS02 dna N/A GO:0000786 ... P62799 39803580
    960565 9e1y:G (2.6) BS01 dna N/A GO:0000786 ... P06897 39803580
    960566 9e1y:G (2.6) BS02 dna N/A GO:0000786 ... P06897 39803580
    960567 9e1y:H (2.6) BS01 dna N/A GO:0000786 ... P02281 39803580
    960568 9e1y:H (2.6) BS02 dna N/A GO:0000786 ... P02281 39803580
    960569 9e22:A (3.3) BS01 ADP N/A GO:0001673 ... Q14204 40750582
    960570 9e22:A (3.3) BS02 ATP N/A GO:0001673 ... Q14204 40750582
    960571 9e22:A (3.3) BS03 MG N/A GO:0001673 ... Q14204 40750582
    960572 9e22:A (3.3) BS04 ATP N/A GO:0001673 ... Q14204 40750582
    960573 9e22:A (3.3) BS05 ADP N/A GO:0001673 ... Q14204 40750582
    960574 9e26:A (2.8) BS01 ATP N/A N/A Q9L714 40268890
    960575 9e26:B (2.8) BS01 ADP N/A N/A Q9L714 40268890
    960576 9e26:D (2.8) BS01 ATP N/A N/A Q9L714 40268890
    960577 9e26:E (2.8) BS01 ADP N/A N/A Q9L714 40268890
    960578 9e27:A (3.2) BS01 MG N/A N/A Q9L714 40268890
    960579 9e27:A (3.2) BS02 ATP N/A N/A Q9L714 40268890
    960580 9e27:B (3.2) BS01 ADP N/A N/A Q9L714 40268890
    960581 9e27:C (3.2) BS01 ADP N/A N/A Q9L714 40268890
    960582 9e27:D (3.2) BS01 MG N/A N/A Q9L714 40268890
    960583 9e27:D (3.2) BS02 ATP N/A N/A Q9L714 40268890
    960584 9e27:E (3.2) BS01 ADP N/A N/A Q9L714 40268890
    960585 9e27:F (3.2) BS01 ADP N/A N/A Q9L714 40268890
    960586 9e27:F (3.2) BS02 MG N/A N/A Q9L714 40268890
    960587 9e29:A (3.3) BS01 MG N/A N/A Q9L714 40268890
    960588 9e29:A (3.3) BS02 ATP N/A N/A Q9L714 40268890
    960589 9e29:B (3.3) BS01 ADP N/A N/A Q9L714 40268890
    960590 9e29:C (3.3) BS01 MG N/A N/A Q9L714 40268890
    960591 9e29:C (3.3) BS02 ADP N/A N/A Q9L714 40268890
    960592 9e29:D (3.3) BS01 ATP N/A N/A Q9L714 40268890
    960593 9e29:E (3.3) BS01 ADP N/A N/A Q9L714 40268890
    960594 9e29:E (3.3) BS02 MG N/A N/A Q9L714 40268890
    960595 9e29:F (3.3) BS01 ADP N/A N/A Q9L714 40268890
    960596 9e29:F (3.3) BS02 MG N/A N/A Q9L714 40268890
    960597 9e2b:A (1.8) BS01 TRP N/A GO:0015276 ... A0ACD6B9Y2 N/A
    960598 9e2b:B (1.8) BS01 TRP N/A GO:0015276 ... A0ACD6B9Y2 N/A
    960599 9e2b:C (1.8) BS01 TRP N/A GO:0015276 ... A0ACD6B9Y2 N/A
    960600 9e2b:D (1.8) BS01 TRP N/A GO:0015276 ... A0ACD6B9Y2 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).