SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4798 4799 4800 4801 4802 4803 4804 4805 4806 4807 4808 4809 4810 4811 4812 4813 4814 4815 4816 4817 4818 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    961401 9e3e:D (2.8) BS01 ACH N/A GO:0004888 ... P02710 41037590
    961402 9e3e:E (2.8) BS01 ACH N/A GO:0004888 ... P02714 41037590
    961403 9e3g:A (3.13) BS01 ACH N/A GO:0004888 ... P02710 41037590
    961404 9e3g:D (3.13) BS01 MAN N/A GO:0004888 ... P02710 41037590
    961405 9e3m:A (2.48) BS01 GDP N/A GO:0001530 ... Q99572 40954149
    961406 9e3m:A (2.48) BS02 ZN N/A GO:0001530 ... Q99572 40954149
    961407 9e3m:A (2.48) BS03 ZN N/A GO:0001530 ... Q99572 40954149
    961408 9e3m:A (2.48) BS04 Y01 N/A GO:0001530 ... Q99572 40954149
    961409 9e3m:A (2.48) BS05 Y01 N/A GO:0001530 ... Q99572 40954149
    961410 9e3m:B (2.48) BS01 GDP N/A GO:0001530 ... Q99572 40954149
    961411 9e3m:B (2.48) BS02 ZN N/A GO:0001530 ... Q99572 40954149
    961412 9e3m:B (2.48) BS03 ZN N/A GO:0001530 ... Q99572 40954149
    961413 9e3m:B (2.48) BS04 Y01 N/A GO:0001530 ... Q99572 40954149
    961414 9e3m:B (2.48) BS05 Y01 N/A GO:0001530 ... Q99572 40954149
    961415 9e3m:C (2.48) BS01 GDP N/A GO:0001530 ... Q99572 40954149
    961416 9e3m:C (2.48) BS02 ZN N/A GO:0001530 ... Q99572 40954149
    961417 9e3m:C (2.48) BS03 ZN N/A GO:0001530 ... Q99572 40954149
    961418 9e3m:C (2.48) BS04 Y01 N/A GO:0001530 ... Q99572 40954149
    961419 9e3m:C (2.48) BS05 Y01 N/A GO:0001530 ... Q99572 40954149
    961420 9e3n:A (2.95) BS01 GDP N/A GO:0001530 ... Q99572 40954149
    961421 9e3n:A (2.95) BS02 ZN N/A GO:0001530 ... Q99572 40954149
    961422 9e3n:A (2.95) BS03 ZN N/A GO:0001530 ... Q99572 40954149
    961423 9e3n:A (2.95) BS04 ATP N/A GO:0001530 ... Q99572 40954149
    961424 9e3n:A (2.95) BS05 ATP N/A GO:0001530 ... Q99572 40954149
    961425 9e3n:B (2.95) BS01 ATP N/A GO:0001530 ... Q99572 40954149
    961426 9e3n:B (2.95) BS02 ATP N/A GO:0001530 ... Q99572 40954149
    961427 9e3n:B (2.95) BS03 GDP N/A GO:0001530 ... Q99572 40954149
    961428 9e3n:B (2.95) BS04 ZN N/A GO:0001530 ... Q99572 40954149
    961429 9e3n:B (2.95) BS05 ZN N/A GO:0001530 ... Q99572 40954149
    961430 9e3n:C (2.95) BS01 ATP N/A GO:0001530 ... Q99572 40954149
    961431 9e3n:C (2.95) BS02 GDP N/A GO:0001530 ... Q99572 40954149
    961432 9e3n:C (2.95) BS03 ZN N/A GO:0001530 ... Q99572 40954149
    961433 9e3n:C (2.95) BS04 ZN N/A GO:0001530 ... Q99572 40954149
    961434 9e3n:C (2.95) BS05 ATP N/A GO:0001530 ... Q99572 40954149
    961435 9e3o:A (2.76) BS01 A1BD8 N/A GO:0001530 ... Q99572 40954149
    961436 9e3o:A (2.76) BS02 GDP N/A GO:0001530 ... Q99572 40954149
    961437 9e3o:A (2.76) BS03 ZN N/A GO:0001530 ... Q99572 40954149
    961438 9e3o:A (2.76) BS04 ZN N/A GO:0001530 ... Q99572 40954149
    961439 9e3o:A (2.76) BS05 Y01 N/A GO:0001530 ... Q99572 40954149
    961440 9e3o:A (2.76) BS06 Y01 N/A GO:0001530 ... Q99572 40954149
    961441 9e3o:B (2.76) BS01 A1BD8 N/A GO:0001530 ... Q99572 40954149
    961442 9e3o:B (2.76) BS02 GDP N/A GO:0001530 ... Q99572 40954149
    961443 9e3o:B (2.76) BS03 ZN N/A GO:0001530 ... Q99572 40954149
    961444 9e3o:B (2.76) BS04 ZN N/A GO:0001530 ... Q99572 40954149
    961445 9e3o:B (2.76) BS05 Y01 N/A GO:0001530 ... Q99572 40954149
    961446 9e3o:B (2.76) BS06 Y01 N/A GO:0001530 ... Q99572 40954149
    961447 9e3o:C (2.76) BS01 A1BD8 N/A GO:0001530 ... Q99572 40954149
    961448 9e3o:C (2.76) BS02 GDP N/A GO:0001530 ... Q99572 40954149
    961449 9e3o:C (2.76) BS03 ZN N/A GO:0001530 ... Q99572 40954149
    961450 9e3o:C (2.76) BS04 ZN N/A GO:0001530 ... Q99572 40954149
    961451 9e3o:C (2.76) BS05 Y01 N/A GO:0001530 ... Q99572 40954149
    961452 9e3o:C (2.76) BS06 Y01 N/A GO:0001530 ... Q99572 40954149
    961453 9e3p:A (2.53) BS01 A1BD9 N/A GO:0001530 ... Q99572 40954149
    961454 9e3p:A (2.53) BS02 GDP N/A GO:0001530 ... Q99572 40954149
    961455 9e3p:A (2.53) BS03 ZN N/A GO:0001530 ... Q99572 40954149
    961456 9e3p:A (2.53) BS04 ZN N/A GO:0001530 ... Q99572 40954149
    961457 9e3p:A (2.53) BS05 Y01 N/A GO:0001530 ... Q99572 40954149
    961458 9e3p:A (2.53) BS06 Y01 N/A GO:0001530 ... Q99572 40954149
    961459 9e3p:B (2.53) BS01 A1BD9 N/A GO:0001530 ... Q99572 40954149
    961460 9e3p:B (2.53) BS02 GDP N/A GO:0001530 ... Q99572 40954149
    961461 9e3p:B (2.53) BS03 ZN N/A GO:0001530 ... Q99572 40954149
    961462 9e3p:B (2.53) BS04 ZN N/A GO:0001530 ... Q99572 40954149
    961463 9e3p:B (2.53) BS05 Y01 N/A GO:0001530 ... Q99572 40954149
    961464 9e3p:B (2.53) BS06 Y01 N/A GO:0001530 ... Q99572 40954149
    961465 9e3p:C (2.53) BS01 A1BD9 N/A GO:0001530 ... Q99572 40954149
    961466 9e3p:C (2.53) BS02 GDP N/A GO:0001530 ... Q99572 40954149
    961467 9e3p:C (2.53) BS03 ZN N/A GO:0001530 ... Q99572 40954149
    961468 9e3p:C (2.53) BS04 ZN N/A GO:0001530 ... Q99572 40954149
    961469 9e3p:C (2.53) BS05 Y01 N/A GO:0001530 ... Q99572 40954149
    961470 9e3p:C (2.53) BS06 Y01 N/A GO:0001530 ... Q99572 40954149
    961471 9e3q:A (2.53) BS01 GDP N/A GO:0000287 ... Q9Z1M0 40954149
    961472 9e3q:A (2.53) BS02 ZN N/A GO:0000287 ... Q9Z1M0 40954149
    961473 9e3q:A (2.53) BS03 ZN N/A GO:0000287 ... Q9Z1M0 40954149
    961474 9e3q:B (2.53) BS01 GDP N/A GO:0000287 ... Q9Z1M0 40954149
    961475 9e3q:B (2.53) BS02 ZN N/A GO:0000287 ... Q9Z1M0 40954149
    961476 9e3q:B (2.53) BS03 ZN N/A GO:0000287 ... Q9Z1M0 40954149
    961477 9e3q:C (2.53) BS01 GDP N/A GO:0000287 ... Q9Z1M0 40954149
    961478 9e3q:C (2.53) BS02 ZN N/A GO:0000287 ... Q9Z1M0 40954149
    961479 9e3q:C (2.53) BS03 ZN N/A GO:0000287 ... Q9Z1M0 40954149
    961480 9e3r:A (6.9) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    961481 9e3r:A (6.9) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    961482 9e3r:B (6.9) BS01 dna N/A GO:0000781 ... P62805 N/A
    961483 9e3r:B (6.9) BS02 dna N/A GO:0000781 ... P62805 N/A
    961484 9e3r:C (6.9) BS01 dna N/A N/A P0C0S8 N/A
    961485 9e3r:C (6.9) BS02 dna N/A N/A P0C0S8 N/A
    961486 9e3r:D (6.9) BS01 dna N/A N/A P06899 N/A
    961487 9e3r:D (6.9) BS02 dna N/A N/A P06899 N/A
    961488 9e3r:E (6.9) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    961489 9e3r:E (6.9) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    961490 9e3r:F (6.9) BS01 dna N/A GO:0000781 ... P62805 N/A
    961491 9e3r:F (6.9) BS02 dna N/A GO:0000781 ... P62805 N/A
    961492 9e3r:G (6.9) BS01 dna N/A N/A P0C0S8 N/A
    961493 9e3r:G (6.9) BS02 dna N/A N/A P0C0S8 N/A
    961494 9e3r:H (6.9) BS01 dna N/A N/A P06899 N/A
    961495 9e3r:H (6.9) BS02 dna N/A N/A P06899 N/A
    961496 9e3r:K (6.9) BS01 ZN N/A N/A Q9Y6K1 N/A
    961497 9e3r:K (6.9) BS02 ZN N/A N/A Q9Y6K1 N/A
    961498 9e3r:K (6.9) BS03 ZN N/A N/A Q9Y6K1 N/A
    961499 9e3r:K (6.9) BS04 SAH N/A N/A Q9Y6K1 N/A
    961500 9e3r:L (6.9) BS01 ZN N/A N/A Q9UBC3 N/A
    961501 9e3r:L (6.9) BS02 ZN N/A N/A Q9UBC3 N/A
    961502 9e3r:L (6.9) BS03 ZN N/A N/A Q9UBC3 N/A
    961503 9e3r:M (6.9) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    961504 9e3r:M (6.9) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    961505 9e3r:N (6.9) BS01 dna N/A GO:0000781 ... P62805 N/A
    961506 9e3r:N (6.9) BS02 dna N/A GO:0000781 ... P62805 N/A
    961507 9e3r:O (6.9) BS01 dna N/A N/A P0C0S8 N/A
    961508 9e3r:O (6.9) BS02 dna N/A N/A P0C0S8 N/A
    961509 9e3r:P (6.9) BS01 dna N/A N/A P06899 N/A
    961510 9e3r:Q (6.9) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    961511 9e3r:Q (6.9) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    961512 9e3r:R (6.9) BS01 dna N/A GO:0000781 ... P62805 N/A
    961513 9e3r:R (6.9) BS02 dna N/A GO:0000781 ... P62805 N/A
    961514 9e3r:S (6.9) BS01 dna N/A N/A P0C0S8 N/A
    961515 9e3r:S (6.9) BS02 dna N/A N/A P0C0S8 N/A
    961516 9e3r:T (6.9) BS01 dna N/A N/A P06899 N/A
    961517 9e3r:U (6.9) BS01 dna N/A N/A Q9Y6K1 N/A
    961518 9e3r:U (6.9) BS02 ZN N/A N/A Q9Y6K1 N/A
    961519 9e3r:U (6.9) BS03 ZN N/A N/A Q9Y6K1 N/A
    961520 9e3r:U (6.9) BS04 ZN N/A N/A Q9Y6K1 N/A
    961521 9e3r:U (6.9) BS05 SAH N/A N/A Q9Y6K1 N/A
    961522 9e3r:V (6.9) BS01 ZN N/A N/A Q9UBC3 N/A
    961523 9e3r:V (6.9) BS02 ZN N/A N/A Q9UBC3 N/A
    961524 9e3r:V (6.9) BS03 ZN N/A N/A Q9UBC3 N/A
    961525 9e3r:W (6.9) BS01 dna N/A N/A Q9Y6K1 N/A
    961526 9e3r:W (6.9) BS02 dna N/A N/A Q9Y6K1 N/A
    961527 9e3r:W (6.9) BS03 ZN N/A N/A Q9Y6K1 N/A
    961528 9e3r:W (6.9) BS04 ZN N/A N/A Q9Y6K1 N/A
    961529 9e3r:W (6.9) BS05 ZN N/A N/A Q9Y6K1 N/A
    961530 9e3r:W (6.9) BS06 SAH N/A N/A Q9Y6K1 N/A
    961531 9e3r:Y (6.9) BS01 SAH N/A N/A Q9Y6K1 N/A
    961532 9e3r:Y (6.9) BS02 ZN N/A N/A Q9Y6K1 N/A
    961533 9e3r:Y (6.9) BS03 ZN N/A N/A Q9Y6K1 N/A
    961534 9e3r:Y (6.9) BS04 ZN N/A N/A Q9Y6K1 N/A
    961535 9e3s:A (1.08) BS01 GNP N/A GO:0003924 ... P01116 40705880
    961536 9e3s:A (1.08) BS02 MG N/A GO:0003924 ... P01116 40705880
    961537 9e3s:A (1.08) BS03 A1BEA N/A GO:0003924 ... P01116 40705880
    961538 9e3s:B (1.08) BS01 GNP N/A GO:0003924 ... P01116 40705880
    961539 9e3s:B (1.08) BS02 MG N/A GO:0003924 ... P01116 40705880
    961540 9e3s:B (1.08) BS03 A1BEA N/A GO:0003924 ... P01116 40705880
    961541 9e3s:C (1.08) BS01 A1BEA N/A GO:0000413 ... P62937 40705880
    961542 9e3s:D (1.08) BS01 A1BEA N/A GO:0000413 ... P62937 40705880
    961543 9e3t:A (1.8) BS01 A1BH4 N/A GO:0017148 ... P02879 39955060
    961544 9e3t:B (1.8) BS01 A1BH4 N/A GO:0017148 ... P02879 39955060
    961545 9e3u:A (4.9) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    961546 9e3u:A (4.9) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    961547 9e3u:B (4.9) BS01 dna N/A GO:0000781 ... P62805 N/A
    961548 9e3u:B (4.9) BS02 dna N/A GO:0000781 ... P62805 N/A
    961549 9e3u:C (4.9) BS01 dna N/A N/A N/A N/A
    961550 9e3u:C (4.9) BS02 dna N/A N/A N/A N/A
    961551 9e3u:D (4.9) BS01 dna N/A N/A A0A1B8Y854 N/A
    961552 9e3u:D (4.9) BS02 dna N/A N/A A0A1B8Y854 N/A
    961553 9e3u:E (4.9) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    961554 9e3u:E (4.9) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    961555 9e3u:F (4.9) BS01 dna N/A GO:0000781 ... P62805 N/A
    961556 9e3u:F (4.9) BS02 dna N/A GO:0000781 ... P62805 N/A
    961557 9e3u:G (4.9) BS01 peptide N/A N/A N/A N/A
    961558 9e3u:G (4.9) BS02 dna N/A N/A N/A N/A
    961559 9e3u:G (4.9) BS03 dna N/A N/A N/A N/A
    961560 9e3u:H (4.9) BS01 peptide N/A N/A A0A1B8Y854 N/A
    961561 9e3u:H (4.9) BS02 dna N/A N/A A0A1B8Y854 N/A
    961562 9e3u:H (4.9) BS03 dna N/A N/A A0A1B8Y854 N/A
    961563 9e3u:U (4.9) BS01 ZN N/A N/A Q9Y6K1 N/A
    961564 9e3u:U (4.9) BS02 ZN N/A N/A Q9Y6K1 N/A
    961565 9e3u:U (4.9) BS03 ZN N/A N/A Q9Y6K1 N/A
    961566 9e3u:U (4.9) BS04 SAH N/A N/A Q9Y6K1 N/A
    961567 9e3u:V (4.9) BS01 ZN N/A N/A Q9UBC3 N/A
    961568 9e3u:V (4.9) BS02 ZN N/A N/A Q9UBC3 N/A
    961569 9e3u:V (4.9) BS03 ZN N/A N/A Q9UBC3 N/A
    961570 9e3u:Y (4.9) BS01 ZN N/A N/A Q9Y6K1 N/A
    961571 9e3u:Y (4.9) BS02 ZN N/A N/A Q9Y6K1 N/A
    961572 9e3u:Y (4.9) BS03 ZN N/A N/A Q9Y6K1 N/A
    961573 9e3u:Y (4.9) BS04 SAH N/A N/A Q9Y6K1 N/A
    961574 9e40:A (1.8) BS01 A1BH3 N/A GO:0017148 ... P02879 39955060
    961575 9e41:A (2.83) BS01 CPL N/A GO:0046983 ... Q8VBK7 40632869
    961576 9e41:C (2.83) BS01 CPL N/A GO:0046983 ... Q8VBK7 40632869
    961577 9e41:E (2.83) BS01 CPL N/A GO:0046983 ... Q8VBK7 40632869
    961578 9e42:A (1.8) BS01 A1BH2 N/A GO:0017148 ... P02879 39955060
    961579 9e42:B (1.8) BS01 A1BH2 N/A GO:0017148 ... P02879 39955060
    961580 9e49:A (5.93) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    961581 9e49:A (5.93) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    961582 9e49:B (5.93) BS01 dna N/A GO:0000781 ... P62805 N/A
    961583 9e49:C (5.93) BS01 dna N/A N/A P0C0S8 N/A
    961584 9e49:C (5.93) BS02 dna N/A N/A P0C0S8 N/A
    961585 9e49:D (5.93) BS01 dna N/A N/A P06899 N/A
    961586 9e49:D (5.93) BS02 dna N/A N/A P06899 N/A
    961587 9e49:E (5.93) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    961588 9e49:E (5.93) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    961589 9e49:F (5.93) BS01 dna N/A GO:0000781 ... P62805 N/A
    961590 9e49:F (5.93) BS02 dna N/A GO:0000781 ... P62805 N/A
    961591 9e49:G (5.93) BS01 dna N/A N/A P0C0S8 N/A
    961592 9e49:G (5.93) BS02 dna N/A N/A P0C0S8 N/A
    961593 9e49:H (5.93) BS01 dna N/A N/A P06899 N/A
    961594 9e49:H (5.93) BS02 dna N/A N/A P06899 N/A
    961595 9e49:M (5.93) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    961596 9e49:M (5.93) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    961597 9e49:N (5.93) BS01 dna N/A GO:0000781 ... P62805 N/A
    961598 9e49:N (5.93) BS02 dna N/A GO:0000781 ... P62805 N/A
    961599 9e49:O (5.93) BS01 dna N/A N/A P0C0S8 N/A
    961600 9e49:O (5.93) BS02 dna N/A N/A P0C0S8 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).