SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    962401 9e5c:WE (3.2) BS02 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962402 9e5c:WF (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962403 9e5c:WG (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962404 9e5c:WH (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962405 9e5c:WI (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962406 9e5c:WJ (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962407 9e5c:WK (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962408 9e5c:WL (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962409 9e5c:WM (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962410 9e5c:WN (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962411 9e5c:WO (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962412 9e5c:WP (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962413 9e5c:WQ (3.2) BS01 MG N/A GO:0000226 ... Q4GYY5 40080582
    962414 9e5c:WQ (3.2) BS02 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962415 9e5c:WR (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962416 9e5c:WS (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962417 9e5c:WT (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962418 9e5c:WU (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962419 9e5c:WV (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962420 9e5c:WW (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962421 9e5c:WX (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962422 9e5c:WY (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962423 9e5c:WZ (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962424 9e5c:XA (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962425 9e5c:XB (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962426 9e5c:XC (3.2) BS01 MG N/A GO:0000226 ... Q4GYY5 40080582
    962427 9e5c:XC (3.2) BS02 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962428 9e5c:XD (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962429 9e5c:XE (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962430 9e5c:XF (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962431 9e5c:XG (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962432 9e5c:XH (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962433 9e5c:XI (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962434 9e5c:XJ (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY6 40080582
    962435 9e5c:XJ (3.2) BS02 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962436 9e5c:XK (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962437 9e5c:XL (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962438 9e5c:XM (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962439 9e5c:XN (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY6 40080582
    962440 9e5c:XN (3.2) BS02 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962441 9e5c:XO (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962442 9e5c:XP (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962443 9e5c:XQ (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962444 9e5c:XR (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962445 9e5c:XS (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962446 9e5c:XT (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962447 9e5c:XU (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962448 9e5c:XV (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY6 40080582
    962449 9e5c:XV (3.2) BS02 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962450 9e5c:XW (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962451 9e5c:XX (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962452 9e5c:XY (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962453 9e5c:XZ (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY6 40080582
    962454 9e5c:XZ (3.2) BS02 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962455 9e5c:YA (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962456 9e5c:YB (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962457 9e5c:YC (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962458 9e5c:YD (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962459 9e5c:YE (3.2) BS01 peptide N/A GO:0000226 ... Q4GYY5 40080582
    962460 9e5c:YE (3.2) BS02 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962461 9e5c:YF (3.2) BS01 peptide N/A GO:0000226 ... Q4GYY6 40080582
    962462 9e5c:YF (3.2) BS02 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962463 9e5c:YG (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962464 9e5c:YH (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962465 9e5c:YJ (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962466 9e5c:YK (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962467 9e5c:YL (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962468 9e5c:YM (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962469 9e5c:YN (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962470 9e5c:YO (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962471 9e5c:YP (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962472 9e5c:YQ (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962473 9e5c:YR (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962474 9e5c:YS (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962475 9e5c:YT (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962476 9e5c:YU (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962477 9e5c:YV (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962478 9e5c:YW (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962479 9e5c:YX (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962480 9e5c:YY (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962481 9e5c:YZ (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962482 9e5c:ZA (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962483 9e5c:ZB (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962484 9e5c:ZC (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962485 9e5c:ZD (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962486 9e5c:ZE (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962487 9e5c:ZF (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962488 9e5c:ZG (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962489 9e5c:ZH (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962490 9e5c:ZI (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962491 9e5c:ZJ (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962492 9e5c:ZK (3.2) BS01 peptide N/A GO:0000226 ... Q4GYY6 40080582
    962493 9e5c:ZK (3.2) BS02 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962494 9e5c:ZL (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962495 9e5c:ZM (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962496 9e5c:ZN (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962497 9e5c:ZO (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962498 9e5c:ZP (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962499 9e5c:ZQ (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962500 9e5c:ZR (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962501 9e5c:ZS (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962502 9e5c:ZT (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962503 9e5c:ZU (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962504 9e5c:ZV (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962505 9e5c:ZW (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962506 9e5c:ZX (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962507 9e5c:ZY (3.2) BS01 GDP N/A GO:0000226 ... Q4GYY6 40080582
    962508 9e5c:ZZ (3.2) BS01 GTP N/A GO:0000226 ... Q4GYY5 40080582
    962509 9e5d:A (1.36) BS01 GDP N/A GO:0003924 ... P01116 39772605
    962510 9e5d:A (1.36) BS02 A1BEI N/A GO:0003924 ... P01116 39772605
    962511 9e5e:A (2.17) BS01 peptide N/A GO:0140737 ... A0A3L1NQK1 39651212
    962512 9e5f:A (1.35) BS01 GDP N/A GO:0003924 ... P01116 39772605
    962513 9e5f:A (1.35) BS02 A1BEJ N/A GO:0003924 ... P01116 39772605
    962514 9e5w:A (1.52) BS01 P5F N/A GO:0003700 ... Q92SD7 39870289
    962515 9e5w:A (1.52) BS02 NAD N/A GO:0003700 ... Q92SD7 39870289
    962516 9e5w:B (1.52) BS01 P5F N/A GO:0003700 ... Q92SD7 39870289
    962517 9e5w:B (1.52) BS02 NAD N/A GO:0003700 ... Q92SD7 39870289
    962518 9e5y:A (3.57) BS01 dna N/A GO:0000166 ... P04415 41459747
    962519 9e5y:C (3.57) BS01 dna N/A GO:0000166 ... P04415 41459747
    962520 9e5y:C (3.57) BS02 dna N/A GO:0000166 ... P04415 41459747
    962521 9e5z:E (3.4) BS01 ZN N/A GO:0000338 ... Q92905 41673158
    962522 9e61:B (3.9) BS01 CPL N/A GO:0000030 ... P46971 41188226
    962523 9e6a:A (2.11) BS01 HCI N/A GO:0003677 ... Q88JP0 41176845
    962524 9e6a:C (2.11) BS01 HCI N/A GO:0003677 ... Q88JP0 41176845
    962525 9e6b:A (3.13) BS01 NRH N/A GO:0004888 ... A0A0L8FVQ9 40532695
    962526 9e6b:A (3.13) BS02 NRH N/A GO:0004888 ... A0A0L8FVQ9 40532695
    962527 9e6b:B (3.13) BS01 NRH N/A GO:0004888 ... A0A0L8FVQ9 40532695
    962528 9e6b:B (3.13) BS02 NRH N/A GO:0004888 ... A0A0L8FVQ9 40532695
    962529 9e6b:C (3.13) BS01 NRH N/A GO:0004888 ... A0A0L8FVQ9 40532695
    962530 9e6b:C (3.13) BS02 NRH N/A GO:0004888 ... A0A0L8FVQ9 40532695
    962531 9e6b:D (3.13) BS01 NRH N/A GO:0004888 ... A0A0L8FVQ9 40532695
    962532 9e6b:D (3.13) BS02 NRH N/A GO:0004888 ... A0A0L8FVQ9 40532695
    962533 9e6b:E (3.13) BS01 NRH N/A GO:0004888 ... A0A0L8FVQ9 40532695
    962534 9e6b:E (3.13) BS02 NRH N/A GO:0004888 ... A0A0L8FVQ9 40532695
    962535 9e6c:A (3.04) BS01 A1BE4 N/A GO:0004888 ... A0A0L8FVQ9 40532695
    962536 9e6c:B (3.04) BS01 A1BE4 N/A GO:0004888 ... A0A0L8FVQ9 40532695
    962537 9e6c:C (3.04) BS01 A1BE4 N/A GO:0004888 ... A0A0L8FVQ9 40532695
    962538 9e6c:D (3.04) BS01 A1BE4 N/A GO:0004888 ... A0A0L8FVQ9 40532695
    962539 9e6c:E (3.04) BS01 A1BE4 N/A GO:0004888 ... A0A0L8FVQ9 40532695
    962540 9e6d:A (3.28) BS01 LUM N/A GO:0004888 ... A0A0L8FVQ9 40532695
    962541 9e6d:A (3.28) BS02 LUM N/A GO:0004888 ... A0A0L8FVQ9 40532695
    962542 9e6d:B (3.28) BS01 LUM N/A GO:0004888 ... A0A0L8FVQ9 40532695
    962543 9e6d:C (3.28) BS01 LUM N/A GO:0004888 ... A0A0L8FVQ9 40532695
    962544 9e6d:D (3.28) BS01 LUM N/A GO:0004888 ... A0A0L8FVQ9 40532695
    962545 9e6d:D (3.28) BS02 LUM N/A GO:0004888 ... A0A0L8FVQ9 40532695
    962546 9e6d:E (3.28) BS01 LUM N/A GO:0004888 ... A0A0L8FVQ9 40532695
    962547 9e6e:A (2.95) BS01 dna N/A GO:0000978 ... P32805 41607282
    962548 9e6e:A (2.95) BS02 dna N/A GO:0000978 ... P32805 41607282
    962549 9e6e:A (2.95) BS03 ZN N/A GO:0000978 ... P32805 41607282
    962550 9e6e:A (2.95) BS04 ZN N/A GO:0000978 ... P32805 41607282
    962551 9e6e:A (2.95) BS05 ZN N/A GO:0000978 ... P32805 41607282
    962552 9e6e:D (2.95) BS01 dna N/A GO:0000978 ... P32805 41607282
    962553 9e6e:D (2.95) BS02 dna N/A GO:0000978 ... P32805 41607282
    962554 9e6e:D (2.95) BS03 ZN N/A GO:0000978 ... P32805 41607282
    962555 9e6e:D (2.95) BS04 ZN N/A GO:0000978 ... P32805 41607282
    962556 9e6e:D (2.95) BS05 ZN N/A GO:0000978 ... P32805 41607282
    962557 9e6h:A (2.84) BS01 CA N/A GO:0030246 ... P0DKL3 40158854
    962558 9e6h:A (2.84) BS02 MN N/A GO:0030246 ... P0DKL3 40158854
    962559 9e6h:B (2.84) BS01 CA N/A GO:0030246 ... P0DKL3 40158854
    962560 9e6h:B (2.84) BS02 MN N/A GO:0030246 ... P0DKL3 40158854
    962561 9e6h:C (2.84) BS01 CA N/A GO:0030246 ... P0DKL3 40158854
    962562 9e6h:C (2.84) BS02 MN N/A GO:0030246 ... P0DKL3 40158854
    962563 9e6h:D (2.84) BS01 CA N/A GO:0030246 ... P0DKL3 40158854
    962564 9e6h:D (2.84) BS02 MN N/A GO:0030246 ... P0DKL3 40158854
    962565 9e6i:A (3.2) BS01 peptide N/A GO:0000030 ... P46971 41188226
    962566 9e6i:A (3.2) BS02 NNM N/A GO:0000030 ... P46971 41188226
    962567 9e6i:B (3.2) BS01 peptide N/A GO:0000030 ... P46971 41188226
    962568 9e6l:A (3.3) BS01 dna N/A GO:0000150 ... P25454 40932772
    962569 9e6l:A (3.3) BS02 ATP N/A GO:0000150 ... P25454 40932772
    962570 9e6l:B (3.3) BS01 dna N/A GO:0000150 ... P25454 40932772
    962571 9e6l:B (3.3) BS02 ATP N/A GO:0000150 ... P25454 40932772
    962572 9e6l:B (3.3) BS03 ATP N/A GO:0000150 ... P25454 40932772
    962573 9e6l:C (3.3) BS01 dna N/A GO:0000150 ... P25454 40932772
    962574 9e6l:C (3.3) BS02 ATP N/A GO:0000150 ... P25454 40932772
    962575 9e6l:C (3.3) BS03 ATP N/A GO:0000150 ... P25454 40932772
    962576 9e6l:D (3.3) BS01 dna N/A GO:0000150 ... P25454 40932772
    962577 9e6l:D (3.3) BS02 ATP N/A GO:0000150 ... P25454 40932772
    962578 9e6l:D (3.3) BS03 ATP N/A GO:0000150 ... P25454 40932772
    962579 9e6l:E (3.3) BS01 dna N/A GO:0000150 ... P25454 40932772
    962580 9e6l:E (3.3) BS02 ATP N/A GO:0000150 ... P25454 40932772
    962581 9e6l:E (3.3) BS03 ATP N/A GO:0000150 ... P25454 40932772
    962582 9e6l:F (3.3) BS01 dna N/A GO:0000150 ... P25454 40932772
    962583 9e6l:F (3.3) BS02 ATP N/A GO:0000150 ... P25454 40932772
    962584 9e6l:F (3.3) BS03 ATP N/A GO:0000150 ... P25454 40932772
    962585 9e6m:A (2.7) BS01 PYR N/A GO:0004470 ... P16243 N/A
    962586 9e6m:B (2.7) BS01 PYR N/A GO:0004470 ... P16243 N/A
    962587 9e6m:C (2.7) BS01 PYR N/A GO:0004470 ... P16243 N/A
    962588 9e6m:D (2.7) BS01 PYR N/A GO:0004470 ... P16243 N/A
    962589 9e6n:A (2.8) BS01 dna N/A GO:0000150 ... P25454 40932772
    962590 9e6n:A (2.8) BS02 ATP N/A GO:0000150 ... P25454 40932772
    962591 9e6n:B (2.8) BS01 dna N/A GO:0000150 ... P25454 40932772
    962592 9e6n:B (2.8) BS02 ATP N/A GO:0000150 ... P25454 40932772
    962593 9e6n:B (2.8) BS03 ATP N/A GO:0000150 ... P25454 40932772
    962594 9e6n:C (2.8) BS01 dna N/A GO:0000150 ... P25454 40932772
    962595 9e6n:C (2.8) BS02 ATP N/A GO:0000150 ... P25454 40932772
    962596 9e6n:C (2.8) BS03 ATP N/A GO:0000150 ... P25454 40932772
    962597 9e6n:D (2.8) BS01 dna N/A GO:0000150 ... P25454 40932772
    962598 9e6n:D (2.8) BS02 ATP N/A GO:0000150 ... P25454 40932772
    962599 9e6n:D (2.8) BS03 ATP N/A GO:0000150 ... P25454 40932772
    962600 9e6n:E (2.8) BS01 dna N/A GO:0000150 ... P25454 40932772

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).