SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    962601 9e6n:E (2.8) BS02 ATP N/A GO:0000150 ... P25454 40932772
    962602 9e6n:E (2.8) BS03 ATP N/A GO:0000150 ... P25454 40932772
    962603 9e6n:F (2.8) BS01 dna N/A GO:0000150 ... P25454 40932772
    962604 9e6n:F (2.8) BS02 ATP N/A GO:0000150 ... P25454 40932772
    962605 9e6n:F (2.8) BS03 ATP N/A GO:0000150 ... P25454 40932772
    962606 9e6q:3 (1.95) BS01 rna N/A N/A A3MX58 40676158
    962607 9e6q:AA (1.95) BS01 rna N/A GO:0002181 ... A3MS41 40676158
    962608 9e6q:AB (1.95) BS01 rna N/A GO:0003723 ... A3MWI4 40676158
    962609 9e6q:AC (1.95) BS01 rna N/A GO:0003735 ... A3MWI5 40676158
    962610 9e6q:AD (1.95) BS01 rna N/A GO:0000049 ... A3MXP8 40676158
    962611 9e6q:AD (1.95) BS02 rna N/A GO:0000049 ... A3MXP8 40676158
    962612 9e6q:AE (1.95) BS01 rna N/A GO:0002181 ... A3MWV5 40676158
    962613 9e6q:AF (1.95) BS01 rna N/A GO:0001682 ... A3MTA9 40676158
    962614 9e6q:AG (1.95) BS01 rna N/A GO:0003729 ... A3MXZ7 40676158
    962615 9e6q:AH (1.95) BS01 rna N/A GO:0003735 ... A3MTP8 40676158
    962616 9e6q:AI (1.95) BS01 rna N/A GO:0003735 ... A3MX34 40676158
    962617 9e6q:AJ (1.95) BS01 rna N/A GO:0003723 ... A3MS76 40676158
    962618 9e6q:AK (1.95) BS01 rna N/A GO:0003723 ... A3MS76 40676158
    962619 9e6q:AL (1.95) BS01 rna N/A GO:0003735 ... A3MUZ1 40676158
    962620 9e6q:AM (1.95) BS01 rna N/A GO:0002181 ... A3MWR6 40676158
    962621 9e6q:AN (1.95) BS01 rna N/A GO:0003735 ... A3MXP3 40676158
    962622 9e6q:AO (1.95) BS01 rna N/A GO:0000027 ... A3MSJ3 40676158
    962623 9e6q:AO (1.95) BS02 rna N/A GO:0000027 ... A3MSJ3 40676158
    962624 9e6q:AP (1.95) BS01 rna N/A GO:0003723 ... A3MXZ6 40676158
    962625 9e6q:AQ (1.95) BS01 rna N/A GO:0003723 ... A3MSJ4 40676158
    962626 9e6q:AR (1.95) BS01 rna N/A GO:0003735 ... A3MX77 40676158
    962627 9e6q:AS (1.95) BS01 rna N/A GO:0003735 ... A3MWX9 40676158
    962628 9e6q:AS (1.95) BS02 rna N/A GO:0003735 ... A3MWX9 40676158
    962629 9e6q:AT (1.95) BS01 rna N/A GO:0002181 ... A3MTL6 40676158
    962630 9e6q:AU (1.95) BS01 rna N/A GO:0003735 ... A3MWI6 40676158
    962631 9e6q:AV (1.95) BS01 rna N/A GO:0003723 ... A3MWZ8 40676158
    962632 9e6q:AW (1.95) BS01 rna N/A GO:0003735 ... A3MTA8 40676158
    962633 9e6q:AW (1.95) BS02 ZN N/A GO:0003735 ... A3MTA8 40676158
    962634 9e6q:AX (1.95) BS01 rna N/A GO:0003735 ... A3MTL2 40676158
    962635 9e6q:AY (1.95) BS01 rna N/A GO:0000463 ... A3MU87 40676158
    962636 9e6q:AY (1.95) BS02 rna N/A GO:0000463 ... A3MU87 40676158
    962637 9e6q:AZ (1.95) BS01 rna N/A GO:0003723 ... A3MXZ2 40676158
    962638 9e6q:Aa (1.95) BS01 rna N/A GO:0002181 ... A3MX75 40676158
    962639 9e6q:Ab (1.95) BS01 rna N/A GO:0003735 ... A3MSJ5 40676158
    962640 9e6q:Ac (1.95) BS01 rna N/A GO:0003735 ... A3MV68 40676158
    962641 9e6q:Ad (1.95) BS01 rna N/A GO:0003735 ... A3MY38 40676158
    962642 9e6q:Ad (1.95) BS02 ZN N/A GO:0003735 ... A3MY38 40676158
    962643 9e6q:Ae (1.95) BS01 rna N/A GO:0003735 ... A3MTT1 40676158
    962644 9e6q:Af (1.95) BS01 rna N/A GO:0003735 ... A3MUU4 40676158
    962645 9e6q:Ag (1.95) BS01 rna N/A GO:0003735 ... A3MX99 40676158
    962646 9e6q:Ag (1.95) BS02 ZN N/A GO:0003735 ... A3MX99 40676158
    962647 9e6q:Ah (1.95) BS01 rna N/A GO:0003735 ... A3MUV1 40676158
    962648 9e6q:Ah (1.95) BS02 ZN N/A GO:0003735 ... A3MUV1 40676158
    962649 9e6q:Ai (1.95) BS01 rna N/A GO:0003735 ... A3MUM7 40676158
    962650 9e6q:Ai (1.95) BS02 ZN N/A GO:0003735 ... A3MUM7 40676158
    962651 9e6q:Aj (1.95) BS01 rna N/A GO:0005737 ... A3MTM7 40676158
    962652 9e6q:Ak (1.95) BS01 rna N/A N/A A3MWU0 40676158
    962653 9e6r:A (2.09) BS01 dna N/A N/A Q9H165 40246927
    962654 9e6r:A (2.09) BS02 dna N/A N/A Q9H165 40246927
    962655 9e6r:A (2.09) BS03 ZN N/A N/A Q9H165 40246927
    962656 9e6r:A (2.09) BS04 ZN N/A N/A Q9H165 40246927
    962657 9e6r:A (2.09) BS05 ZN N/A N/A Q9H165 40246927
    962658 9e6r:A (2.09) BS06 ZN N/A N/A Q9H165 40246927
    962659 9e6r:D (2.09) BS01 dna N/A N/A Q9H165 40246927
    962660 9e6r:D (2.09) BS02 ZN N/A N/A Q9H165 40246927
    962661 9e6r:D (2.09) BS03 ZN N/A N/A Q9H165 40246927
    962662 9e6r:Y (2.09) BS01 dna N/A N/A Q9H165 40246927
    962663 9e6r:Y (2.09) BS02 dna N/A N/A Q9H165 40246927
    962664 9e6r:Y (2.09) BS03 ZN N/A N/A Q9H165 40246927
    962665 9e6r:Y (2.09) BS04 ZN N/A N/A Q9H165 40246927
    962666 9e6s:A (2.2) BS01 dna N/A N/A Q9H165 40246927
    962667 9e6s:A (2.2) BS02 dna N/A N/A Q9H165 40246927
    962668 9e6s:A (2.2) BS03 ZN N/A N/A Q9H165 40246927
    962669 9e6s:A (2.2) BS04 ZN N/A N/A Q9H165 40246927
    962670 9e6s:A (2.2) BS05 ZN N/A N/A Q9H165 40246927
    962671 9e6s:D (2.2) BS01 dna N/A N/A Q9H165 40246927
    962672 9e6s:D (2.2) BS02 dna N/A N/A Q9H165 40246927
    962673 9e6s:D (2.2) BS03 ZN N/A N/A Q9H165 40246927
    962674 9e6s:D (2.2) BS04 ZN N/A N/A Q9H165 40246927
    962675 9e6s:D (2.2) BS05 ZN N/A N/A Q9H165 40246927
    962676 9e6t:A (2.78) BS01 dna N/A N/A Q9H165 40246927
    962677 9e6t:A (2.78) BS02 dna N/A N/A Q9H165 40246927
    962678 9e6t:A (2.78) BS03 ZN N/A N/A Q9H165 40246927
    962679 9e6t:A (2.78) BS04 ZN N/A N/A Q9H165 40246927
    962680 9e6t:A (2.78) BS05 ZN N/A N/A Q9H165 40246927
    962681 9e6t:B (2.78) BS01 dna N/A N/A Q9H165 40246927
    962682 9e6t:B (2.78) BS02 dna N/A N/A Q9H165 40246927
    962683 9e6t:B (2.78) BS03 ZN N/A N/A Q9H165 40246927
    962684 9e6t:B (2.78) BS04 ZN N/A N/A Q9H165 40246927
    962685 9e6t:B (2.78) BS05 ZN N/A N/A Q9H165 40246927
    962686 9e6u:A (2.488) BS01 U47 N/A GO:0004298 ... Q9H6P5 N/A
    962687 9e6u:B (2.488) BS01 U47 N/A GO:0004298 ... Q9H6P5 N/A
    962688 9e6v:A (3.5) BS01 peptide N/A GO:0000030 ... P46971 41188226
    962689 9e6v:A (3.5) BS02 MAN N/A GO:0000030 ... P46971 41188226
    962690 9e6v:B (3.5) BS01 peptide N/A GO:0000030 ... P46971 41188226
    962691 9e6v:B (3.5) BS02 CPL N/A GO:0000030 ... P46971 41188226
    962692 9e6w:A (2.04) BS01 dna N/A GO:0003677 ... Q04207 41063342
    962693 9e6w:A (2.04) BS02 dna N/A GO:0003677 ... Q04207 41063342
    962694 9e6w:B (2.04) BS01 dna N/A GO:0003677 ... Q04207 41063342
    962695 9e6w:B (2.04) BS02 dna N/A GO:0003677 ... Q04207 41063342
    962696 9e6x:A (2.5) BS01 FE N/A GO:0005506 ... P02791 40257419
    962697 9e6z:A (1.7) BS01 QG7 N/A GO:0005576 ... P22629 39600509
    962698 9e70:A (2.1) BS01 A3P N/A GO:0003676 ... Q8IZH2 40205031
    962699 9e70:A (2.1) BS02 MG N/A GO:0003676 ... Q8IZH2 40205031
    962700 9e70:A (2.1) BS03 MG N/A GO:0003676 ... Q8IZH2 40205031
    962701 9e71:AA (2.36) BS01 rna N/A GO:0002181 ... A3MS41 40676158
    962702 9e71:AB (2.36) BS01 rna N/A GO:0003723 ... A3MWI4 40676158
    962703 9e71:AC (2.36) BS01 rna N/A GO:0003735 ... A3MWI5 40676158
    962704 9e71:AD (2.36) BS01 rna N/A GO:0000049 ... A3MXP8 40676158
    962705 9e71:AD (2.36) BS02 rna N/A GO:0000049 ... A3MXP8 40676158
    962706 9e71:AE (2.36) BS01 rna N/A GO:0002181 ... A3MWV5 40676158
    962707 9e71:AF (2.36) BS01 rna N/A GO:0001682 ... A3MTA9 40676158
    962708 9e71:AG (2.36) BS01 rna N/A GO:0003729 ... A3MXZ7 40676158
    962709 9e71:AH (2.36) BS01 rna N/A GO:0003735 ... A3MTP8 40676158
    962710 9e71:AI (2.36) BS01 rna N/A GO:0003735 ... A3MX34 40676158
    962711 9e71:AJ (2.36) BS01 rna N/A GO:0003723 ... A3MS76 40676158
    962712 9e71:AK (2.36) BS01 rna N/A GO:0003723 ... A3MS76 40676158
    962713 9e71:AL (2.36) BS01 rna N/A GO:0003735 ... A3MUZ1 40676158
    962714 9e71:AM (2.36) BS01 rna N/A GO:0002181 ... A3MWR6 40676158
    962715 9e71:AN (2.36) BS01 rna N/A GO:0003735 ... A3MXP3 40676158
    962716 9e71:AN (2.36) BS02 rna N/A GO:0003735 ... A3MXP3 40676158
    962717 9e71:AO (2.36) BS01 rna N/A GO:0000027 ... A3MSJ3 40676158
    962718 9e71:AO (2.36) BS02 rna N/A GO:0000027 ... A3MSJ3 40676158
    962719 9e71:AP (2.36) BS01 rna N/A GO:0003723 ... A3MXZ6 40676158
    962720 9e71:AQ (2.36) BS01 rna N/A GO:0003723 ... A3MSJ4 40676158
    962721 9e71:AR (2.36) BS01 rna N/A GO:0003735 ... A3MX77 40676158
    962722 9e71:AS (2.36) BS01 rna N/A GO:0003735 ... A3MWX9 40676158
    962723 9e71:AS (2.36) BS02 rna N/A GO:0003735 ... A3MWX9 40676158
    962724 9e71:AT (2.36) BS01 rna N/A GO:0002181 ... A3MTL6 40676158
    962725 9e71:AU (2.36) BS01 rna N/A GO:0003735 ... A3MWI6 40676158
    962726 9e71:AV (2.36) BS01 rna N/A GO:0003723 ... A3MWZ8 40676158
    962727 9e71:AW (2.36) BS01 rna N/A GO:0003735 ... A3MTA8 40676158
    962728 9e71:AW (2.36) BS02 ZN N/A GO:0003735 ... A3MTA8 40676158
    962729 9e71:AX (2.36) BS01 rna N/A GO:0003735 ... A3MTL2 40676158
    962730 9e71:AY (2.36) BS01 rna N/A GO:0000463 ... A3MU87 40676158
    962731 9e71:AY (2.36) BS02 rna N/A GO:0000463 ... A3MU87 40676158
    962732 9e71:AZ (2.36) BS01 rna N/A GO:0003723 ... A3MXZ2 40676158
    962733 9e71:Aa (2.36) BS01 rna N/A GO:0002181 ... A3MX75 40676158
    962734 9e71:Ab (2.36) BS01 rna N/A GO:0003735 ... A3MSJ5 40676158
    962735 9e71:Ac (2.36) BS01 rna N/A GO:0003735 ... A3MV68 40676158
    962736 9e71:Ad (2.36) BS01 rna N/A GO:0003735 ... A3MY38 40676158
    962737 9e71:Ad (2.36) BS02 ZN N/A GO:0003735 ... A3MY38 40676158
    962738 9e71:Ae (2.36) BS01 rna N/A GO:0003735 ... A3MTT1 40676158
    962739 9e71:Af (2.36) BS01 rna N/A GO:0003735 ... A3MUU4 40676158
    962740 9e71:Ag (2.36) BS01 rna N/A GO:0003735 ... A3MX99 40676158
    962741 9e71:Ag (2.36) BS02 ZN N/A GO:0003735 ... A3MX99 40676158
    962742 9e71:Ah (2.36) BS01 rna N/A GO:0003735 ... A3MUV1 40676158
    962743 9e71:Ah (2.36) BS02 ZN N/A GO:0003735 ... A3MUV1 40676158
    962744 9e71:Ai (2.36) BS01 rna N/A GO:0003735 ... A3MUM7 40676158
    962745 9e71:Ai (2.36) BS02 ZN N/A GO:0003735 ... A3MUM7 40676158
    962746 9e71:Aj (2.36) BS01 rna N/A GO:0005737 ... A3MTM7 40676158
    962747 9e71:Ak (2.36) BS01 rna N/A N/A A3MWU0 40676158
    962748 9e71:BA (2.36) BS01 rna N/A GO:0003735 ... A3MVE0 40676158
    962749 9e71:BB (2.36) BS01 rna N/A GO:0003735 ... A3MS50 40676158
    962750 9e71:BC (2.36) BS01 rna N/A GO:0003676 ... A3MTL3 40676158
    962751 9e71:BD (2.36) BS01 rna N/A GO:0003723 ... A3MUS9 40676158
    962752 9e71:BE (2.36) BS01 rna N/A GO:0003723 ... A3MWZ7 40676158
    962753 9e71:BF (2.36) BS01 rna N/A GO:0003723 ... A3MU88 40676158
    962754 9e71:BF (2.36) BS02 ZN N/A GO:0003723 ... A3MU88 40676158
    962755 9e71:BG (2.36) BS01 rna N/A GO:0003735 ... A3MUD0 40676158
    962756 9e71:BH (2.36) BS01 rna N/A GO:0003723 ... A3MS29 40676158
    962757 9e71:BI (2.36) BS01 rna N/A GO:0003735 ... A3MSJ6 40676158
    962758 9e71:BJ (2.36) BS01 rna N/A GO:0003735 ... A3MWY2 40676158
    962759 9e71:BK (2.36) BS01 rna N/A GO:0000462 ... A3MXZ8 40676158
    962760 9e71:BL (2.36) BS01 rna N/A GO:0000049 ... A3MT22 40676158
    962761 9e71:BL (2.36) BS02 peptide N/A GO:0000049 ... A3MT22 40676158
    962762 9e71:BM (2.36) BS01 rna N/A GO:0003735 ... A3MX63 40676158
    962763 9e71:BN (2.36) BS01 rna N/A GO:0003735 ... A3MXZ4 40676158
    962764 9e71:BO (2.36) BS01 rna N/A GO:0003676 ... A3MUT0 40676158
    962765 9e71:BQ (2.36) BS01 rna N/A GO:0003735 ... A3MVD1 40676158
    962766 9e71:BR (2.36) BS01 rna N/A GO:0003735 ... A3MTT7 40676158
    962767 9e71:BR (2.36) BS02 ZN N/A GO:0003735 ... A3MTT7 40676158
    962768 9e71:BS (2.36) BS01 rna N/A GO:0003735 ... A3MS42 40676158
    962769 9e71:BT (2.36) BS01 rna N/A GO:0000028 ... A3MTT6 40676158
    962770 9e71:BU (2.36) BS01 rna N/A GO:0000028 ... A3MUU6 40676158
    962771 9e71:BV (2.36) BS01 rna N/A GO:0003735 ... A3MSX4 40676158
    962772 9e71:BW (2.36) BS01 rna N/A N/A A3MV37 40676158
    962773 9e71:BX (2.36) BS01 rna N/A GO:0003729 ... A3MV49 40676158
    962774 9e71:BX (2.36) BS02 ZN N/A GO:0003729 ... A3MV49 40676158
    962775 9e71:BY (2.36) BS01 rna N/A GO:0003735 ... A3MUV2 40676158
    962776 9e71:BY (2.36) BS02 ZN N/A GO:0003735 ... A3MUV2 40676158
    962777 9e71:BZ (2.36) BS01 rna N/A GO:0003735 ... N/A 40676158
    962778 9e71:Ba (2.36) BS01 rna N/A GO:0003735 ... A3MSW3 40676158
    962779 9e71:Bb (2.36) BS01 rna N/A N/A N/A 40676158
    962780 9e71:Bc (2.36) BS01 rna N/A N/A A3MY11 40676158
    962781 9e71:Bc (2.36) BS02 ZN N/A N/A A3MY11 40676158
    962782 9e72:A (1.81) BS01 SAH N/A N/A N/A N/A
    962783 9e72:A (1.81) BS02 A1BHZ N/A N/A N/A N/A
    962784 9e72:B (1.81) BS01 SAH N/A N/A N/A N/A
    962785 9e72:B (1.81) BS02 A1BHZ N/A N/A N/A N/A
    962786 9e77:E (3.3) BS01 6LT N/A GO:0000338 ... Q92905 41673158
    962787 9e77:E (3.3) BS02 ZN N/A GO:0000338 ... Q92905 41673158
    962788 9e78:0 (2.9) BS01 ZN N/A N/A A0A640KV25 40080577
    962789 9e78:0G (2.9) BS01 peptide N/A GO:0031514 ... A0A640KAI7 40080577
    962790 9e78:0n (2.9) BS01 peptide N/A GO:0005634 ... A0A640KTX6 40080577
    962791 9e78:0w (2.9) BS01 peptide N/A N/A A0A640KCR0 40080577
    962792 9e78:0w (2.9) BS02 peptide N/A N/A A0A640KCR0 40080577
    962793 9e78:0z (2.9) BS01 ZN N/A N/A A0A640KN81 40080577
    962794 9e78:1S (2.9) BS01 CA N/A GO:0005509 ... A0A640KA97 40080577
    962795 9e78:1V (2.9) BS01 ZN N/A N/A N/A 40080577
    962796 9e78:1V (2.9) BS02 ZN N/A N/A N/A 40080577
    962797 9e78:1Y (2.9) BS01 ZN N/A N/A N/A 40080577
    962798 9e78:1Y (2.9) BS02 ZN N/A N/A N/A 40080577
    962799 9e78:1b (2.9) BS01 ZN N/A N/A N/A 40080577
    962800 9e78:1b (2.9) BS02 ZN N/A N/A N/A 40080577

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).