SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    963201 9e78:TK (2.9) BS01 MG N/A GO:0005200 ... A0A640KB30 40080577
    963202 9e78:TK (2.9) BS02 GTP N/A GO:0005200 ... A0A640KB30 40080577
    963203 9e78:TL (2.9) BS01 GDP N/A GO:0003924 ... A0A640KQN0 40080577
    963204 9e78:U (2.9) BS01 GDP N/A GO:0003924 ... A0A640KQN0 40080577
    963205 9e78:U (2.9) BS02 GTP N/A GO:0003924 ... A0A640KQN0 40080577
    963206 9e78:UA (2.9) BS01 peptide N/A GO:0005200 ... A0A640KB30 40080577
    963207 9e78:UA (2.9) BS02 MG N/A GO:0005200 ... A0A640KB30 40080577
    963208 9e78:UA (2.9) BS03 GTP N/A GO:0005200 ... A0A640KB30 40080577
    963209 9e78:UB (2.9) BS01 GDP N/A GO:0003924 ... A0A640KQN0 40080577
    963210 9e78:UC (2.9) BS01 MG N/A GO:0005200 ... A0A640KB30 40080577
    963211 9e78:UC (2.9) BS02 GTP N/A GO:0005200 ... A0A640KB30 40080577
    963212 9e78:UD (2.9) BS01 GDP N/A GO:0003924 ... A0A640KQN0 40080577
    963213 9e78:UD (2.9) BS02 GTP N/A GO:0003924 ... A0A640KQN0 40080577
    963214 9e78:UE (2.9) BS01 GTP N/A GO:0005200 ... A0A640KB30 40080577
    963215 9e78:UF (2.9) BS01 GDP N/A GO:0003924 ... A0A640KQN0 40080577
    963216 9e78:UF (2.9) BS02 GTP N/A GO:0003924 ... A0A640KQN0 40080577
    963217 9e78:UG (2.9) BS01 GTP N/A GO:0005200 ... A0A640KB30 40080577
    963218 9e78:UH (2.9) BS01 GDP N/A GO:0003924 ... A0A640KQN0 40080577
    963219 9e78:UI (2.9) BS01 GTP N/A GO:0005200 ... A0A640KB30 40080577
    963220 9e78:UJ (2.9) BS01 GDP N/A GO:0003924 ... A0A640KQN0 40080577
    963221 9e78:UK (2.9) BS01 GTP N/A GO:0005200 ... A0A640KB30 40080577
    963222 9e78:UL (2.9) BS01 GDP N/A GO:0003924 ... A0A640KQN0 40080577
    963223 9e78:V (2.9) BS01 GDP N/A GO:0003924 ... A0A640KQN0 40080577
    963224 9e78:VA (2.9) BS01 peptide N/A GO:0005200 ... A0A640KB30 40080577
    963225 9e78:VA (2.9) BS02 MG N/A GO:0005200 ... A0A640KB30 40080577
    963226 9e78:VA (2.9) BS03 GTP N/A GO:0005200 ... A0A640KB30 40080577
    963227 9e78:VB (2.9) BS01 GDP N/A GO:0003924 ... A0A640KQN0 40080577
    963228 9e78:VB (2.9) BS02 GTP N/A GO:0003924 ... A0A640KQN0 40080577
    963229 9e78:VC (2.9) BS01 MG N/A GO:0005200 ... A0A640KB30 40080577
    963230 9e78:VC (2.9) BS02 GTP N/A GO:0005200 ... A0A640KB30 40080577
    963231 9e78:VD (2.9) BS01 GDP N/A GO:0003924 ... A0A640KQN0 40080577
    963232 9e78:VE (2.9) BS01 GTP N/A GO:0005200 ... A0A640KB30 40080577
    963233 9e78:VF (2.9) BS01 GDP N/A GO:0003924 ... A0A640KQN0 40080577
    963234 9e78:VF (2.9) BS02 GTP N/A GO:0003924 ... A0A640KQN0 40080577
    963235 9e78:VG (2.9) BS01 GTP N/A GO:0005200 ... A0A640KB30 40080577
    963236 9e78:VH (2.9) BS01 GDP N/A GO:0003924 ... A0A640KQN0 40080577
    963237 9e78:VH (2.9) BS02 GTP N/A GO:0003924 ... A0A640KQN0 40080577
    963238 9e78:VI (2.9) BS01 GTP N/A GO:0005200 ... A0A640KB30 40080577
    963239 9e78:VJ (2.9) BS01 GDP N/A GO:0003924 ... A0A640KQN0 40080577
    963240 9e78:VK (2.9) BS01 GTP N/A GO:0005200 ... A0A640KB30 40080577
    963241 9e78:VL (2.9) BS01 GDP N/A GO:0003924 ... A0A640KQN0 40080577
    963242 9e78:VL (2.9) BS02 GTP N/A GO:0003924 ... A0A640KQN0 40080577
    963243 9e78:VM (2.9) BS01 MG N/A GO:0005200 ... A0A640KB30 40080577
    963244 9e78:VM (2.9) BS02 GTP N/A GO:0005200 ... A0A640KB30 40080577
    963245 9e78:W (2.9) BS01 GDP N/A GO:0003924 ... A0A640KQN0 40080577
    963246 9e78:WA (2.9) BS01 GTP N/A GO:0005200 ... A0A640KB30 40080577
    963247 9e78:WB (2.9) BS01 GDP N/A GO:0003924 ... A0A640KQN0 40080577
    963248 9e78:WB (2.9) BS02 GTP N/A GO:0003924 ... A0A640KQN0 40080577
    963249 9e78:WC (2.9) BS01 MG N/A GO:0005200 ... A0A640KB30 40080577
    963250 9e78:WC (2.9) BS02 GTP N/A GO:0005200 ... A0A640KB30 40080577
    963251 9e78:WD (2.9) BS01 GDP N/A GO:0003924 ... A0A640KQN0 40080577
    963252 9e78:WE (2.9) BS01 GTP N/A GO:0005200 ... A0A640KB30 40080577
    963253 9e78:WF (2.9) BS01 GDP N/A GO:0003924 ... A0A640KQN0 40080577
    963254 9e78:WG (2.9) BS01 GTP N/A GO:0005200 ... A0A640KB30 40080577
    963255 9e78:WH (2.9) BS01 GDP N/A GO:0003924 ... A0A640KQN0 40080577
    963256 9e78:WI (2.9) BS01 MG N/A GO:0005200 ... A0A640KB30 40080577
    963257 9e78:WI (2.9) BS02 GTP N/A GO:0005200 ... A0A640KB30 40080577
    963258 9e78:WJ (2.9) BS01 GDP N/A GO:0003924 ... A0A640KQN0 40080577
    963259 9e78:WK (2.9) BS01 MG N/A GO:0005200 ... A0A640KB30 40080577
    963260 9e78:WK (2.9) BS02 GTP N/A GO:0005200 ... A0A640KB30 40080577
    963261 9e78:WL (2.9) BS01 GDP N/A GO:0003924 ... A0A640KQN0 40080577
    963262 9e78:WL (2.9) BS02 GTP N/A GO:0003924 ... A0A640KQN0 40080577
    963263 9e78:WM (2.9) BS01 GTP N/A GO:0005200 ... A0A640KB30 40080577
    963264 9e7a:A (1.69) BS01 peptide N/A N/A P46971 41188226
    963265 9e7a:B (1.69) BS01 peptide N/A N/A P46971 41188226
    963266 9e7a:C (1.69) BS01 peptide N/A N/A P46971 41188226
    963267 9e7b:A (1.3) BS01 A1BFE N/A N/A P0DTD1 N/A
    963268 9e7d:A (3.11) BS01 rna N/A N/A N/A N/A
    963269 9e7d:A (3.11) BS02 rna N/A N/A N/A N/A
    963270 9e7d:B (3.11) BS01 rna N/A N/A N/A N/A
    963271 9e7d:B (3.11) BS02 rna N/A N/A N/A N/A
    963272 9e7d:H (3.11) BS01 rna N/A N/A N/A N/A
    963273 9e7d:L (3.11) BS01 rna N/A N/A N/A N/A
    963274 9e7e:A (2.75) BS01 rna N/A N/A N/A N/A
    963275 9e7e:B (2.75) BS01 rna N/A N/A N/A N/A
    963276 9e7e:D (2.75) BS01 rna N/A N/A N/A N/A
    963277 9e7e:E (2.75) BS01 rna N/A N/A N/A N/A
    963278 9e7e:G (2.75) BS01 rna N/A N/A N/A N/A
    963279 9e7e:H (2.75) BS01 rna N/A N/A N/A N/A
    963280 9e7e:I (2.75) BS01 rna N/A N/A N/A N/A
    963281 9e7e:L (2.75) BS01 rna N/A N/A N/A N/A
    963282 9e7f:3 (2.53) BS01 rna N/A N/A A3MX58 40676158
    963283 9e7f:AA (2.53) BS01 rna N/A GO:0002181 ... A3MS41 40676158
    963284 9e7f:AB (2.53) BS01 rna N/A GO:0003723 ... A3MWI4 40676158
    963285 9e7f:AC (2.53) BS01 rna N/A GO:0003735 ... A3MWI5 40676158
    963286 9e7f:AD (2.53) BS01 rna N/A GO:0000049 ... A3MXP8 40676158
    963287 9e7f:AD (2.53) BS02 rna N/A GO:0000049 ... A3MXP8 40676158
    963288 9e7f:AE (2.53) BS01 rna N/A GO:0002181 ... A3MWV5 40676158
    963289 9e7f:AF (2.53) BS01 rna N/A GO:0001682 ... A3MTA9 40676158
    963290 9e7f:AG (2.53) BS01 rna N/A GO:0003729 ... A3MXZ7 40676158
    963291 9e7f:AH (2.53) BS01 rna N/A GO:0003735 ... A3MTP8 40676158
    963292 9e7f:AI (2.53) BS01 rna N/A GO:0003735 ... A3MX34 40676158
    963293 9e7f:AI (2.53) BS02 rna N/A GO:0003735 ... A3MX34 40676158
    963294 9e7f:AJ (2.53) BS01 rna N/A GO:0003723 ... A3MS76 40676158
    963295 9e7f:AK (2.53) BS01 rna N/A GO:0003723 ... A3MS76 40676158
    963296 9e7f:AL (2.53) BS01 rna N/A GO:0003735 ... A3MUZ1 40676158
    963297 9e7f:AM (2.53) BS01 rna N/A GO:0002181 ... A3MWR6 40676158
    963298 9e7f:AN (2.53) BS01 rna N/A GO:0003735 ... A3MXP3 40676158
    963299 9e7f:AN (2.53) BS02 rna N/A GO:0003735 ... A3MXP3 40676158
    963300 9e7f:AO (2.53) BS01 rna N/A GO:0000027 ... A3MSJ3 40676158
    963301 9e7f:AO (2.53) BS02 rna N/A GO:0000027 ... A3MSJ3 40676158
    963302 9e7f:AP (2.53) BS01 rna N/A GO:0003723 ... A3MXZ6 40676158
    963303 9e7f:AQ (2.53) BS01 rna N/A GO:0003723 ... A3MSJ4 40676158
    963304 9e7f:AR (2.53) BS01 rna N/A GO:0003735 ... A3MX77 40676158
    963305 9e7f:AS (2.53) BS01 rna N/A GO:0003735 ... A3MWX9 40676158
    963306 9e7f:AS (2.53) BS02 rna N/A GO:0003735 ... A3MWX9 40676158
    963307 9e7f:AT (2.53) BS01 rna N/A GO:0002181 ... A3MTL6 40676158
    963308 9e7f:AU (2.53) BS01 rna N/A GO:0003735 ... A3MWI6 40676158
    963309 9e7f:AV (2.53) BS01 rna N/A GO:0003723 ... A3MWZ8 40676158
    963310 9e7f:AW (2.53) BS01 rna N/A GO:0003735 ... A3MTA8 40676158
    963311 9e7f:AW (2.53) BS02 ZN N/A GO:0003735 ... A3MTA8 40676158
    963312 9e7f:AX (2.53) BS01 rna N/A GO:0003735 ... A3MTL2 40676158
    963313 9e7f:AY (2.53) BS01 rna N/A GO:0000463 ... A3MU87 40676158
    963314 9e7f:AY (2.53) BS02 rna N/A GO:0000463 ... A3MU87 40676158
    963315 9e7f:AZ (2.53) BS01 rna N/A GO:0003723 ... A3MXZ2 40676158
    963316 9e7f:Aa (2.53) BS01 rna N/A GO:0002181 ... A3MX75 40676158
    963317 9e7f:Ab (2.53) BS01 rna N/A GO:0003735 ... A3MSJ5 40676158
    963318 9e7f:Ac (2.53) BS01 rna N/A GO:0003735 ... A3MV68 40676158
    963319 9e7f:Ad (2.53) BS01 rna N/A GO:0003735 ... A3MY38 40676158
    963320 9e7f:Ad (2.53) BS02 ZN N/A GO:0003735 ... A3MY38 40676158
    963321 9e7f:Ae (2.53) BS01 rna N/A GO:0003735 ... A3MTT1 40676158
    963322 9e7f:Af (2.53) BS01 rna N/A GO:0003735 ... A3MUU4 40676158
    963323 9e7f:Ag (2.53) BS01 rna N/A GO:0003735 ... A3MX99 40676158
    963324 9e7f:Ag (2.53) BS02 ZN N/A GO:0003735 ... A3MX99 40676158
    963325 9e7f:Ah (2.53) BS01 rna N/A GO:0003735 ... A3MUV1 40676158
    963326 9e7f:Ah (2.53) BS02 ZN N/A GO:0003735 ... A3MUV1 40676158
    963327 9e7f:Ai (2.53) BS01 rna N/A GO:0003735 ... A3MUM7 40676158
    963328 9e7f:Ai (2.53) BS02 ZN N/A GO:0003735 ... A3MUM7 40676158
    963329 9e7f:Aj (2.53) BS01 rna N/A GO:0005737 ... A3MTM7 40676158
    963330 9e7f:Ak (2.53) BS01 rna N/A N/A A3MWU0 40676158
    963331 9e7f:BA (2.53) BS01 rna N/A GO:0003735 ... A3MVE0 40676158
    963332 9e7f:BB (2.53) BS01 rna N/A GO:0003735 ... A3MS50 40676158
    963333 9e7f:BC (2.53) BS01 rna N/A GO:0003676 ... A3MTL3 40676158
    963334 9e7f:BD (2.53) BS01 rna N/A GO:0003723 ... A3MUS9 40676158
    963335 9e7f:BE (2.53) BS01 rna N/A GO:0003723 ... A3MWZ7 40676158
    963336 9e7f:BF (2.53) BS01 rna N/A GO:0003723 ... A3MU88 40676158
    963337 9e7f:BF (2.53) BS02 ZN N/A GO:0003723 ... A3MU88 40676158
    963338 9e7f:BG (2.53) BS01 rna N/A GO:0003735 ... A3MUD0 40676158
    963339 9e7f:BH (2.53) BS01 rna N/A GO:0003723 ... A3MS29 40676158
    963340 9e7f:BI (2.53) BS01 rna N/A GO:0003735 ... A3MSJ6 40676158
    963341 9e7f:BJ (2.53) BS01 rna N/A GO:0003735 ... A3MWY2 40676158
    963342 9e7f:BK (2.53) BS01 rna N/A GO:0000462 ... A3MXZ8 40676158
    963343 9e7f:BL (2.53) BS01 rna N/A GO:0000049 ... A3MT22 40676158
    963344 9e7f:BL (2.53) BS02 peptide N/A GO:0000049 ... A3MT22 40676158
    963345 9e7f:BM (2.53) BS01 rna N/A GO:0003735 ... A3MX63 40676158
    963346 9e7f:BN (2.53) BS01 rna N/A GO:0003735 ... A3MXZ4 40676158
    963347 9e7f:BO (2.53) BS01 rna N/A GO:0003676 ... A3MUT0 40676158
    963348 9e7f:BQ (2.53) BS01 rna N/A GO:0003735 ... A3MVD1 40676158
    963349 9e7f:BR (2.53) BS01 rna N/A GO:0003735 ... A3MTT7 40676158
    963350 9e7f:BR (2.53) BS02 ZN N/A GO:0003735 ... A3MTT7 40676158
    963351 9e7f:BS (2.53) BS01 rna N/A GO:0003735 ... A3MS42 40676158
    963352 9e7f:BT (2.53) BS01 rna N/A GO:0000028 ... A3MTT6 40676158
    963353 9e7f:BU (2.53) BS01 rna N/A GO:0000028 ... A3MUU6 40676158
    963354 9e7f:BV (2.53) BS01 rna N/A GO:0003735 ... A3MSX4 40676158
    963355 9e7f:BW (2.53) BS01 rna N/A N/A A3MV37 40676158
    963356 9e7f:BX (2.53) BS01 rna N/A GO:0003729 ... A3MV49 40676158
    963357 9e7f:BX (2.53) BS02 ZN N/A GO:0003729 ... A3MV49 40676158
    963358 9e7f:BY (2.53) BS01 rna N/A GO:0003735 ... A3MUV2 40676158
    963359 9e7f:BY (2.53) BS02 ZN N/A GO:0003735 ... A3MUV2 40676158
    963360 9e7f:BZ (2.53) BS01 rna N/A GO:0000028 ... B1Y9V2 40676158
    963361 9e7f:Ba (2.53) BS01 rna N/A GO:0003735 ... A3MSW3 40676158
    963362 9e7f:Bb (2.53) BS01 rna N/A N/A N/A 40676158
    963363 9e7f:Bc (2.53) BS01 rna N/A N/A A3MY11 40676158
    963364 9e7f:Bc (2.53) BS02 ZN N/A N/A A3MY11 40676158
    963365 9e7g:H (3.0) BS01 rna N/A N/A N/A N/A
    963366 9e7g:L (3.0) BS01 rna N/A N/A N/A N/A
    963367 9e7h:A (3.29) BS01 SF4 N/A GO:0005524 ... B9KK24 40274796
    963368 9e7h:A (3.29) BS02 PMR N/A GO:0005524 ... B9KK24 40274796
    963369 9e7h:B (3.29) BS01 SF4 N/A GO:0005524 ... B9KK25 40274796
    963370 9e7h:B (3.29) BS02 PMR N/A GO:0005524 ... B9KK25 40274796
    963371 9e7h:B (3.29) BS03 PMR N/A GO:0005524 ... B9KK25 40274796
    963372 9e7h:C (3.29) BS01 PMR N/A GO:0005524 ... B9KK24 40274796
    963373 9e7h:C (3.29) BS02 SF4 N/A GO:0005524 ... B9KK24 40274796
    963374 9e7h:D (3.29) BS01 PMR N/A GO:0005524 ... B9KK25 40274796
    963375 9e7h:D (3.29) BS02 PMR N/A GO:0005524 ... B9KK25 40274796
    963376 9e7h:D (3.29) BS03 SF4 N/A GO:0005524 ... B9KK25 40274796
    963377 9e7h:D (3.29) BS04 CU N/A GO:0005524 ... B9KK25 40274796
    963378 9e7m:La (3.37) BS01 SF4 N/A GO:0030430 ... P03738 41237242
    963379 9e7m:Lb (3.37) BS01 SF4 N/A GO:0030430 ... P03738 41237242
    963380 9e7m:Lc (3.37) BS01 SF4 N/A GO:0030430 ... P03738 41237242
    963381 9e7r:B (3.18) BS01 peptide N/A GO:0001750 ... P62873 40287415
    963382 9e7r:R (3.18) BS01 A1BF3 N/A GO:0001648 ... P55085 40287415
    963383 9e7s:A (1.75) BS01 A1BFE N/A N/A P0DTD1 N/A
    963384 9e7t:C (2.8) BS01 MG N/A GO:0000175 ... Q9UIV1 40651939
    963385 9e7u:C (3.5) BS01 MG N/A GO:0000175 ... Q12306
    Q9UFF9
    40651939
    963386 9e7v:C (3.4) BS01 dna N/A GO:0000345 ... P9WGY9 41233305
    963387 9e7v:C (3.4) BS02 dna N/A GO:0000345 ... P9WGY9 41233305
    963388 9e7v:D (3.4) BS01 dna N/A GO:0000287 ... P9WGY7 41233305
    963389 9e7v:D (3.4) BS02 dna N/A GO:0000287 ... P9WGY7 41233305
    963390 9e7v:D (3.4) BS03 ZN N/A GO:0000287 ... P9WGY7 41233305
    963391 9e7v:D (3.4) BS04 ZN N/A GO:0000287 ... P9WGY7 41233305
    963392 9e7v:D (3.4) BS05 MG N/A GO:0000287 ... P9WGY7 41233305
    963393 9e7v:F (3.4) BS01 dna N/A GO:0000976 ... P9WGI1 41233305
    963394 9e7v:F (3.4) BS02 dna N/A GO:0000976 ... P9WGI1 41233305
    963395 9e7v:M (3.4) BS01 dna N/A GO:0000794 ... P9WJG3
    Q12306
    41233305
    963396 9e7v:M (3.4) BS02 dna N/A GO:0000794 ... P9WJG3
    Q12306
    41233305
    963397 9e7y:C (4.2) BS01 rna N/A GO:0003677 ... P9WGZ1 41233305
    963398 9e7y:C (4.2) BS02 dna N/A GO:0003677 ... P9WGZ1 41233305
    963399 9e7y:C (4.2) BS03 POP N/A GO:0003677 ... P9WGZ1 41233305
    963400 9e7y:D (4.2) BS01 dna N/A GO:0003677 ... P9WGY9 41233305

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).