SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    963601 9e8o:D (3.1) BS02 ADP N/A GO:0000502 ... P43686 41198955
    963602 9e8o:E (3.1) BS01 ADP N/A GO:0000502 ... P62333 41198955
    963603 9e8o:F (3.1) BS01 ADP N/A GO:0000502 ... P17980 41198955
    963604 9e8o:c (3.1) BS01 ZN N/A GO:0000502 ... O00487 41198955
    963605 9e8q:A (3.16) BS01 peptide N/A GO:0000502 ... P35998 41198955
    963606 9e8q:A (3.16) BS02 ADP N/A GO:0000502 ... P35998 41198955
    963607 9e8q:B (3.16) BS01 peptide N/A GO:0000502 ... P62191 41198955
    963608 9e8q:B (3.16) BS02 ATP N/A GO:0000502 ... P62191 41198955
    963609 9e8q:C (3.16) BS01 peptide N/A GO:0000502 ... P62195 41198955
    963610 9e8q:C (3.16) BS02 ATP N/A GO:0000502 ... P62195 41198955
    963611 9e8q:C (3.16) BS03 ATP N/A GO:0000502 ... P62195 41198955
    963612 9e8q:C (3.16) BS04 MG N/A GO:0000502 ... P62195 41198955
    963613 9e8q:D (3.16) BS01 ATP N/A GO:0000502 ... P43686 41198955
    963614 9e8q:D (3.16) BS02 ADP N/A GO:0000502 ... P43686 41198955
    963615 9e8q:E (3.16) BS01 peptide N/A GO:0000502 ... P62333 41198955
    963616 9e8q:E (3.16) BS02 ADP N/A GO:0000502 ... P62333 41198955
    963617 9e8q:F (3.16) BS01 ADP N/A GO:0000502 ... P17980 41198955
    963618 9e8q:c (3.16) BS01 peptide N/A GO:0000502 ... O00487 41198955
    963619 9e8q:c (3.16) BS02 ZN N/A GO:0000502 ... O00487 41198955
    963620 9e8r:A (1.5) BS01 A1BFE N/A N/A P0DTD1 N/A
    963621 9e8s:A (2.48) BS01 FE N/A GO:0004322 ... Q8U1L3 41052476
    963622 9e8s:A (2.48) BS02 FE N/A GO:0004322 ... Q8U1L3 41052476
    963623 9e8s:A (2.48) BS03 OXY N/A GO:0004322 ... Q8U1L3 41052476
    963624 9e8s:A (2.48) BS04 FE N/A GO:0004322 ... Q8U1L3 41052476
    963625 9e8s:A (2.48) BS05 O N/A GO:0004322 ... Q8U1L3 41052476
    963626 9e8s:B (2.48) BS01 FE N/A GO:0004322 ... Q8U1L3 41052476
    963627 9e8s:B (2.48) BS02 FE N/A GO:0004322 ... Q8U1L3 41052476
    963628 9e8s:B (2.48) BS03 FE N/A GO:0004322 ... Q8U1L3 41052476
    963629 9e8s:B (2.48) BS04 O N/A GO:0004322 ... Q8U1L3 41052476
    963630 9e8s:C (2.48) BS01 FE N/A GO:0004322 ... Q8U1L3 41052476
    963631 9e8s:C (2.48) BS02 FE N/A GO:0004322 ... Q8U1L3 41052476
    963632 9e8s:C (2.48) BS03 OXY N/A GO:0004322 ... Q8U1L3 41052476
    963633 9e8s:C (2.48) BS04 O N/A GO:0004322 ... Q8U1L3 41052476
    963634 9e8s:D (2.48) BS01 FE N/A GO:0004322 ... Q8U1L3 41052476
    963635 9e8s:D (2.48) BS02 FE N/A GO:0004322 ... Q8U1L3 41052476
    963636 9e8s:D (2.48) BS03 OXY N/A GO:0004322 ... Q8U1L3 41052476
    963637 9e8s:E (2.48) BS01 FE N/A GO:0004322 ... Q8U1L3 41052476
    963638 9e8s:E (2.48) BS02 FE N/A GO:0004322 ... Q8U1L3 41052476
    963639 9e8s:F (2.48) BS01 FE N/A GO:0004322 ... Q8U1L3 41052476
    963640 9e8s:F (2.48) BS02 FE N/A GO:0004322 ... Q8U1L3 41052476
    963641 9e8s:F (2.48) BS03 OXY N/A GO:0004322 ... Q8U1L3 41052476
    963642 9e8s:G (2.48) BS01 FE N/A GO:0004322 ... Q8U1L3 41052476
    963643 9e8s:G (2.48) BS02 FE N/A GO:0004322 ... Q8U1L3 41052476
    963644 9e8s:G (2.48) BS03 OXY N/A GO:0004322 ... Q8U1L3 41052476
    963645 9e8s:H (2.48) BS01 FE N/A GO:0004322 ... Q8U1L3 41052476
    963646 9e8s:H (2.48) BS02 FE N/A GO:0004322 ... Q8U1L3 41052476
    963647 9e8s:I (2.48) BS01 FE N/A GO:0004322 ... Q8U1L3 41052476
    963648 9e8s:I (2.48) BS02 FE N/A GO:0004322 ... Q8U1L3 41052476
    963649 9e8s:I (2.48) BS03 OXY N/A GO:0004322 ... Q8U1L3 41052476
    963650 9e8s:J (2.48) BS01 FE N/A GO:0004322 ... Q8U1L3 41052476
    963651 9e8s:J (2.48) BS02 FE N/A GO:0004322 ... Q8U1L3 41052476
    963652 9e8s:J (2.48) BS03 OXY N/A GO:0004322 ... Q8U1L3 41052476
    963653 9e8s:K (2.48) BS01 FE N/A GO:0004322 ... Q8U1L3 41052476
    963654 9e8s:K (2.48) BS02 FE N/A GO:0004322 ... Q8U1L3 41052476
    963655 9e8s:K (2.48) BS03 OXY N/A GO:0004322 ... Q8U1L3 41052476
    963656 9e8s:L (2.48) BS01 FE N/A GO:0004322 ... Q8U1L3 41052476
    963657 9e8s:L (2.48) BS02 FE N/A GO:0004322 ... Q8U1L3 41052476
    963658 9e8s:L (2.48) BS03 OXY N/A GO:0004322 ... Q8U1L3 41052476
    963659 9e8v:A (3.0) BS01 A1BGB N/A GO:0000122 ... P37840 N/A
    963660 9e8v:C (3.0) BS01 A1BGB N/A GO:0000122 ... P37840 N/A
    963661 9e8v:E (3.0) BS01 A1BGB N/A GO:0000122 ... P37840 N/A
    963662 9e8v:G (3.0) BS01 A1BGB N/A GO:0000122 ... P37840 N/A
    963663 9e8v:I (3.0) BS01 A1BGB N/A GO:0000122 ... P37840 N/A
    963664 9e8w:A (2.8) BS01 A1BGB N/A GO:0000122 ... P37840 N/A
    963665 9e8w:C (2.8) BS01 A1BGB N/A GO:0000122 ... P37840 N/A
    963666 9e8w:E (2.8) BS01 A1BGB N/A GO:0000122 ... P37840 N/A
    963667 9e8w:I (2.8) BS01 A1BGB N/A GO:0000122 ... P37840 N/A
    963668 9e8x:A (2.8) BS01 A1BGB N/A GO:0000122 ... P37840 N/A
    963669 9e8x:C (2.8) BS01 A1BGB N/A GO:0000122 ... P37840 N/A
    963670 9e8x:E (2.8) BS01 A1BGB N/A GO:0000122 ... P37840 N/A
    963671 9e8x:G (2.8) BS01 A1BGB N/A GO:0000122 ... P37840 N/A
    963672 9e8x:I (2.8) BS01 A1BGB N/A GO:0000122 ... P37840 N/A
    963673 9e8y:A (2.9) BS01 A1BGB N/A GO:0000122 ... P37840 N/A
    963674 9e8y:C (2.9) BS01 A1BGB N/A GO:0000122 ... P37840 N/A
    963675 9e8y:E (2.9) BS01 A1BGB N/A GO:0000122 ... P37840 N/A
    963676 9e8y:G (2.9) BS01 A1BGB N/A GO:0000122 ... P37840 N/A
    963677 9e8y:I (2.9) BS01 A1BGB N/A GO:0000122 ... P37840 N/A
    963678 9e8z:A (3.47) BS01 dna N/A GO:0000731 ... Q47527 40504952
    963679 9e8z:A (3.47) BS02 ADP N/A GO:0000731 ... Q47527 40504952
    963680 9e8z:A (3.47) BS03 ADP N/A GO:0000731 ... Q47527 40504952
    963681 9e8z:B (3.47) BS01 ZN N/A N/A P0DV93 40504952
    963682 9e8z:C (3.47) BS01 dna N/A GO:0000731 ... Q47527 40504952
    963683 9e8z:C (3.47) BS02 rna N/A GO:0000731 ... Q47527 40504952
    963684 9e8z:C (3.47) BS03 ADP N/A GO:0000731 ... Q47527 40504952
    963685 9e8z:C (3.47) BS04 ADP N/A GO:0000731 ... Q47527 40504952
    963686 9e8z:E (3.47) BS01 ZN N/A N/A P0DV93 40504952
    963687 9e8z:F (3.47) BS01 dna N/A GO:0000731 ... Q47527 40504952
    963688 9e8z:H (3.47) BS01 dna N/A GO:0003723 ... Q47526 40504952
    963689 9e8z:H (3.47) BS02 rna N/A GO:0003723 ... Q47526 40504952
    963690 9e90:A (3.45) BS01 ATP N/A GO:0000731 ... Q47527 40504952
    963691 9e90:A (3.45) BS02 ATP N/A GO:0000731 ... Q47527 40504952
    963692 9e90:B (3.45) BS01 ZN N/A N/A P0DV93 40504952
    963693 9e90:C (3.45) BS01 ATP N/A GO:0000731 ... Q47527 40504952
    963694 9e90:C (3.45) BS02 ATP N/A GO:0000731 ... Q47527 40504952
    963695 9e91:A (3.31) BS01 ATP N/A GO:0000731 ... Q47527 40504952
    963696 9e91:A (3.31) BS02 ATP N/A GO:0000731 ... Q47527 40504952
    963697 9e91:B (3.31) BS01 ATP N/A GO:0000731 ... Q47527 40504952
    963698 9e91:B (3.31) BS02 ATP N/A GO:0000731 ... Q47527 40504952
    963699 9e92:A (1.5) BS01 BGC N/A N/A Q5UNV6 40691173
    963700 9e92:A (1.5) BS02 GLC N/A N/A Q5UNV6 40691173
    963701 9e92:A (1.5) BS03 UDP N/A N/A Q5UNV6 40691173
    963702 9e92:A (1.5) BS04 MN N/A N/A Q5UNV6 40691173
    963703 9e92:A (1.5) BS05 BGC N/A N/A Q5UNV6 40691173
    963704 9e92:A (1.5) BS06 BGC N/A N/A Q5UNV6 40691173
    963705 9e92:A (1.5) BS07 GAL N/A N/A Q5UNV6 40691173
    963706 9e92:B (1.5) BS01 UDP N/A N/A Q5UNV6 40691173
    963707 9e92:B (1.5) BS02 MN N/A N/A Q5UNV6 40691173
    963708 9e92:B (1.5) BS03 BGC N/A N/A Q5UNV6 40691173
    963709 9e92:B (1.5) BS04 BGC N/A N/A Q5UNV6 40691173
    963710 9e92:B (1.5) BS05 GAL N/A N/A Q5UNV6 40691173
    963711 9e93:A (3.58) BS01 rna N/A N/A B7T0U6 40593686
    963712 9e93:A (3.58) BS02 rna N/A N/A B7T0U6 40593686
    963713 9e93:A (3.58) BS03 ZN N/A N/A B7T0U6 40593686
    963714 9e93:E (3.58) BS01 rna N/A N/A B7T0U6 40593686
    963715 9e93:E (3.58) BS02 rna N/A N/A B7T0U6 40593686
    963716 9e93:E (3.58) BS03 ZN N/A N/A B7T0U6 40593686
    963717 9e93:p (3.58) BS01 rna N/A N/A P12504 40593686
    963718 9e93:t (3.58) BS01 rna N/A N/A P12504 40593686
    963719 9e97:A (1.53) BS01 A1BGC N/A GO:0005829 ... Q9X266 40631863
    963720 9e97:A (1.53) BS02 CA N/A GO:0005829 ... Q9X266 40631863
    963721 9e97:B (1.53) BS01 A1BGC N/A GO:0005829 ... Q9X266 40631863
    963722 9e97:B (1.53) BS02 CA N/A GO:0005829 ... Q9X266 40631863
    963723 9e9b:A (2.61) BS01 TPP N/A GO:0000287 ... A0A0H3GD77 40673487
    963724 9e9b:A (2.61) BS02 MG N/A GO:0000287 ... A0A0H3GD77 40673487
    963725 9e9c:0 (3.62) BS01 rna N/A GO:0003735 ... Q9DCI9 40562754
    963726 9e9c:0 (3.62) BS02 ZN N/A GO:0003735 ... Q9DCI9 40562754
    963727 9e9c:1 (3.62) BS01 rna N/A GO:0003735 ... Q9CQP0 40562754
    963728 9e9c:2 (3.62) BS01 rna N/A GO:0003735 ... Q99N91 40562754
    963729 9e9c:3 (3.62) BS01 rna N/A GO:0003674 ... Q9CQL6 40562754
    963730 9e9c:4 (3.62) BS01 rna N/A GO:0003735 ... Q99N90 40562754
    963731 9e9c:4 (3.62) BS02 ZN N/A GO:0003735 ... Q99N90 40562754
    963732 9e9c:5 (3.62) BS01 rna N/A GO:0003735 ... Q921S7 40562754
    963733 9e9c:6 (3.62) BS01 rna N/A GO:0003674 ... Q8K2M0 40562754
    963734 9e9c:6 (3.62) BS02 rna N/A GO:0003674 ... Q8K2M0 40562754
    963735 9e9c:8 (3.62) BS01 rna N/A GO:0005730 ... Q9Z2Q5 40562754
    963736 9e9c:9 (3.62) BS01 rna N/A GO:0003735 ... Q9CQN7 40562754
    963737 9e9c:D (3.62) BS01 rna N/A GO:0003723 ... Q9D773 40562754
    963738 9e9c:E (3.62) BS01 rna N/A GO:0003735 ... Q99N95 40562754
    963739 9e9c:F (3.62) BS01 rna N/A GO:0003735 ... Q9DCU6 40562754
    963740 9e9c:H (3.62) BS01 rna N/A GO:0003735 ... Q99N94 40562754
    963741 9e9c:I (3.62) BS01 rna N/A GO:0003735 ... Q3TBW2 40562754
    963742 9e9c:I (3.62) BS02 FES N/A GO:0003735 ... Q3TBW2 40562754
    963743 9e9c:J (3.62) BS01 rna N/A GO:0003735 ... Q9CQF0 40562754
    963744 9e9c:K (3.62) BS01 rna N/A GO:0003729 ... Q9D1P0 40562754
    963745 9e9c:L (3.62) BS01 rna N/A GO:0003735 ... Q9D1I6 40562754
    963746 9e9c:M (3.62) BS01 rna N/A GO:0003735 ... Q9CPR5 40562754
    963747 9e9c:M (3.62) BS02 MG N/A GO:0003735 ... Q9CPR5 40562754
    963748 9e9c:O (3.62) BS01 rna N/A GO:0003735 ... Q9D8P4 40562754
    963749 9e9c:O (3.62) BS02 MG N/A GO:0003735 ... Q9D8P4 40562754
    963750 9e9c:P (3.62) BS01 rna N/A GO:0003735 ... Q9H0U6 40562754
    963751 9e9c:P (3.62) BS02 rna N/A GO:0003735 ... Q9H0U6 40562754
    963752 9e9c:Q (3.62) BS01 rna N/A GO:0003735 ... Q9D338 40562754
    963753 9e9c:R (3.62) BS01 rna N/A GO:0003735 ... Q9CQL4 40562754
    963754 9e9c:S (3.62) BS01 rna N/A GO:0003723 ... Q9D1N9 40562754
    963755 9e9c:T (3.62) BS01 rna N/A GO:0003735 ... Q8BU88 40562754
    963756 9e9c:U (3.62) BS01 rna N/A GO:0001650 ... O35972 40562754
    963757 9e9c:V (3.62) BS01 rna N/A GO:0003723 ... Q9CQ06 40562754
    963758 9e9c:W (3.62) BS01 rna N/A GO:0003735 ... Q99N92 40562754
    963759 9e9c:X (3.62) BS01 rna N/A GO:0003735 ... Q9D1B9 40562754
    963760 9e9c:Y (3.62) BS01 rna N/A GO:0003735 ... Q8K2Y7 40562754
    963761 9e9c:Z (3.62) BS01 rna N/A GO:0003674 ... Q9D7N6 40562754
    963762 9e9c:a (3.62) BS01 rna N/A GO:0005739 ... Q9CPV3 40562754
    963763 9e9c:b (3.62) BS01 rna N/A GO:0003735 ... Q5RL20 40562754
    963764 9e9c:c (3.62) BS01 rna N/A GO:0003725 ... Q9CY73 40562754
    963765 9e9c:d (3.62) BS01 rna N/A GO:0003735 ... Q9D0Q7 40562754
    963766 9e9c:e (3.62) BS01 rna N/A GO:0003735 ... Q9EQI8 40562754
    963767 9e9c:f (3.62) BS01 rna N/A GO:0003674 ... Q8JZS9 40562754
    963768 9e9c:g (3.62) BS01 rna N/A GO:0003735 ... Q9CQ40 40562754
    963769 9e9c:i (3.62) BS01 rna N/A GO:0003735 ... Q9CPY1 40562754
    963770 9e9c:j (3.62) BS01 rna N/A GO:0003735 ... Q9D0Y8 40562754
    963771 9e9c:l (3.62) BS01 rna N/A GO:0003735 ... Q9CPW3 40562754
    963772 9e9c:m (3.62) BS01 rna N/A GO:0003735 ... Q9CZ83 40562754
    963773 9e9c:o (3.62) BS01 rna N/A GO:0003735 ... Q9CQF8 40562754
    963774 9e9c:q (3.62) BS01 rna N/A GO:0003735 ... Q9CR59 40562754
    963775 9e9c:r (3.62) BS01 rna N/A GO:0003735 ... Q99N85 40562754
    963776 9e9c:r (3.62) BS02 FES N/A GO:0003735 ... Q99N85 40562754
    963777 9e9c:s (3.62) BS01 rna N/A GO:0003735 ... Q9D0G0 40562754
    963778 9e9c:t (3.62) BS01 rna N/A GO:0000287 ... Q8K013 40562754
    963779 9e9c:t (3.62) BS02 GNP N/A GO:0000287 ... Q8K013 40562754
    963780 9e9c:u (3.62) BS01 rna N/A GO:0005739 ... Q9CWV0 40562754
    963781 9e9c:x (3.62) BS01 rna N/A GO:0000957 ... Q9CZ57 40562754
    963782 9e9c:y (3.62) BS01 rna N/A GO:0003676 ... Q8BVN4 40562754
    963783 9e9c:z (3.62) BS01 rna N/A GO:0003924 ... Q8R2R6 40562754
    963784 9e9c:z (3.62) BS02 GNP N/A GO:0003924 ... Q8R2R6 40562754
    963785 9e9d:A (3.24) BS01 A1BX3 N/A GO:0000149 ... P19491
    Q71RJ2
    41315228
    963786 9e9d:B (3.24) BS01 A1BX3 N/A GO:0000149 ... P19491
    Q71RJ2
    41315228
    963787 9e9d:C (3.24) BS01 A1BX3 N/A GO:0000149 ... P19491
    Q71RJ2
    41315228
    963788 9e9d:D (3.24) BS01 A1BX3 N/A GO:0000149 ... P19491
    Q71RJ2
    41315228
    963789 9e9e:A (3.24) BS01 A1BX3 N/A GO:0000149 ... P19491
    Q71RJ2
    41315228
    963790 9e9e:B (3.24) BS01 A1BX3 N/A GO:0000149 ... P19491
    Q71RJ2
    41315228
    963791 9e9e:C (3.24) BS01 A1BX3 N/A GO:0000149 ... P19491
    Q71RJ2
    41315228
    963792 9e9e:D (3.24) BS01 A1BX3 N/A GO:0000149 ... P19491
    Q71RJ2
    41315228
    963793 9e9h:A (1.65) BS01 GDP N/A GO:0003924 ... P01116 39930787
    963794 9e9h:A (1.65) BS02 A1BH6 N/A GO:0003924 ... P01116 39930787
    963795 9e9i:A (1.18) BS01 GDP N/A GO:0003924 ... P01116 39930787
    963796 9e9i:A (1.18) BS02 A1BH5 N/A GO:0003924 ... P01116 39930787
    963797 9e9j:A (2.15) BS01 CA N/A GO:0005829 ... Q9X266 40631863
    963798 9e9j:B (2.15) BS01 CA N/A GO:0005829 ... Q9X266 40631863
    963799 9e9j:C (2.15) BS01 CA N/A GO:0005829 ... Q9X266 40631863
    963800 9e9j:D (2.15) BS01 CA N/A GO:0005829 ... Q9X266 40631863

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).