SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    964201 9edx:A (2.03) BS01 A1BIO N/A GO:0004672 ... A0A1D8PKB4 40038303
    964202 9edy:A (2.3) BS01 A1BIN N/A GO:0004672 ... A0A1D8PKB4 40038303
    964203 9edz:A (3.0) BS01 peptide N/A N/A P12493 N/A
    964204 9edz:B (3.0) BS01 peptide N/A N/A P12493 N/A
    964205 9edz:C (3.0) BS01 peptide N/A N/A P12493 N/A
    964206 9edz:D (3.0) BS01 peptide N/A N/A P12493 N/A
    964207 9edz:E (3.0) BS01 peptide N/A N/A P12493 N/A
    964208 9edz:F (3.0) BS01 peptide N/A N/A P12493 N/A
    964209 9edz:G (3.0) BS01 peptide N/A N/A P12493 N/A
    964210 9edz:I (3.0) BS01 peptide N/A N/A P12493 N/A
    964211 9edz:J (3.0) BS01 peptide N/A N/A P12493 N/A
    964212 9edz:K (3.0) BS01 peptide N/A N/A P12493 N/A
    964213 9edz:L (3.0) BS01 peptide N/A N/A P12493 N/A
    964214 9ee0:A (3.1) BS01 peptide N/A N/A P12493 N/A
    964215 9ee0:B (3.1) BS01 peptide N/A N/A P12493 N/A
    964216 9ee0:C (3.1) BS01 peptide N/A N/A P12493 N/A
    964217 9ee0:D (3.1) BS01 peptide N/A N/A P12493 N/A
    964218 9ee0:E (3.1) BS01 peptide N/A N/A P12493 N/A
    964219 9ee0:F (3.1) BS01 peptide N/A N/A P12493 N/A
    964220 9ee0:F (3.1) BS02 peptide N/A N/A P12493 N/A
    964221 9ee0:G (3.1) BS01 peptide N/A N/A P12493 N/A
    964222 9ee0:H (3.1) BS01 peptide N/A N/A P12493 N/A
    964223 9ee0:I (3.1) BS01 peptide N/A N/A P12493 N/A
    964224 9ee0:J (3.1) BS01 peptide N/A N/A P12493 N/A
    964225 9ee0:K (3.1) BS01 peptide N/A N/A P12493 N/A
    964226 9ee0:L (3.1) BS01 peptide N/A N/A P12493 N/A
    964227 9ee1:A (3.0) BS01 peptide N/A N/A P12493 N/A
    964228 9ee1:B (3.0) BS01 peptide N/A N/A P12493 N/A
    964229 9ee1:C (3.0) BS01 peptide N/A N/A P12493 N/A
    964230 9ee1:D (3.0) BS01 peptide N/A N/A P12493 N/A
    964231 9ee1:E (3.0) BS01 peptide N/A N/A P12493 N/A
    964232 9ee1:F (3.0) BS01 peptide N/A N/A P12493 N/A
    964233 9ee1:G (3.0) BS01 peptide N/A N/A P12493 N/A
    964234 9ee1:H (3.0) BS01 peptide N/A N/A P12493 N/A
    964235 9ee1:I (3.0) BS01 peptide N/A N/A P12493 N/A
    964236 9ee1:J (3.0) BS01 peptide N/A N/A P12493 N/A
    964237 9ee1:K (3.0) BS01 peptide N/A N/A P12493 N/A
    964238 9ee1:L (3.0) BS01 peptide N/A N/A P12493 N/A
    964239 9ee2:A (2.99) BS01 peptide N/A N/A P12493 N/A
    964240 9ee2:B (2.99) BS01 peptide N/A N/A P12493 N/A
    964241 9ee2:C (2.99) BS01 peptide N/A N/A P12493 N/A
    964242 9ee2:C (2.99) BS02 peptide N/A N/A P12493 N/A
    964243 9ee2:D (2.99) BS01 peptide N/A N/A P12493 N/A
    964244 9ee2:E (2.99) BS01 peptide N/A N/A P12493 N/A
    964245 9ee2:F (2.99) BS01 peptide N/A N/A P12493 N/A
    964246 9ee2:G (2.99) BS01 peptide N/A N/A P12493 N/A
    964247 9ee2:I (2.99) BS01 peptide N/A N/A P12493 N/A
    964248 9ee2:J (2.99) BS01 peptide N/A N/A P12493 N/A
    964249 9ee2:K (2.99) BS01 peptide N/A N/A P12493 N/A
    964250 9ee2:L (2.99) BS01 peptide N/A N/A P12493 N/A
    964251 9ee3:A (3.1) BS01 peptide N/A N/A P12493 N/A
    964252 9ee3:C (3.1) BS01 peptide N/A N/A P12493 N/A
    964253 9ee3:D (3.1) BS01 peptide N/A N/A P12493 N/A
    964254 9ee3:E (3.1) BS01 peptide N/A N/A P12493 N/A
    964255 9ee3:G (3.1) BS01 peptide N/A N/A P12493 N/A
    964256 9ee3:K (3.1) BS01 peptide N/A N/A P12493 N/A
    964257 9ee3:L (3.1) BS01 peptide N/A N/A P12493 N/A
    964258 9ee4:A (3.1) BS01 peptide N/A N/A P12493 N/A
    964259 9ee4:C (3.1) BS01 peptide N/A N/A P12493 N/A
    964260 9ee4:D (3.1) BS01 peptide N/A N/A P12493 N/A
    964261 9ee4:E (3.1) BS01 peptide N/A N/A P12493 N/A
    964262 9ee4:F (3.1) BS01 peptide N/A N/A P12493 N/A
    964263 9ee4:G (3.1) BS01 peptide N/A N/A P12493 N/A
    964264 9ee4:I (3.1) BS01 peptide N/A N/A P12493 N/A
    964265 9ee4:J (3.1) BS01 peptide N/A N/A P12493 N/A
    964266 9ee4:K (3.1) BS01 peptide N/A N/A P12493 N/A
    964267 9ee4:L (3.1) BS01 peptide N/A N/A P12493 N/A
    964268 9ee4:L (3.1) BS02 peptide N/A N/A P12493 N/A
    964269 9ee5:A (2.89) BS01 A1BIL N/A GO:0004930 ... Q13258 41062467
    964270 9ee8:A (2.63) BS01 ADN N/A GO:0001609 ... P29274 39875358
    964271 9ee9:A (3.16) BS01 ADN N/A GO:0001609 ... P29274 39875358
    964272 9eea:A (3.36) BS01 ADN N/A GO:0001609 ... P29274 39875358
    964273 9eeb:A (3.7) BS01 GTP N/A GO:0000226 ... P02550 41461644
    964274 9eeb:B (3.7) BS01 GDP N/A GO:0000226 ... P02554 41461644
    964275 9eeb:G (3.7) BS01 GTP N/A GO:0003674 ... P39110 41461644
    964276 9eed:A (2.1) BS01 12C N/A N/A A0A0U5FKB2 N/A
    964277 9eee:A (1.7) BS01 A1BHU N/A GO:0004190 ... Q7SSI0 39848476
    964278 9eee:B (1.7) BS01 A1BHU N/A GO:0004190 ... Q7SSI0 39848476
    964279 9eeg:A (1.7) BS01 A1BHV N/A GO:0004190 ... Q7SSI0 39848476
    964280 9eeg:B (1.7) BS01 A1BHV N/A GO:0004190 ... Q7SSI0 39848476
    964281 9eei:A (2.76) BS01 UED N/A GO:0008233 ... P0DTD1 40479048
    964282 9eet:A (2.39) BS01 UED N/A GO:0008233 ... P0DTD1 40479048
    964283 9eev:A (2.4) BS01 4WI N/A GO:0008233 ... P0DTD1 40479048
    964284 9eez:A (1.6) BS01 A1BHT N/A GO:0004725 ... P54829 40616465
    964285 9eez:A (1.6) BS02 A1BHT N/A GO:0004725 ... P54829 40616465
    964286 9ef0:A (3.33) BS01 FMN N/A GO:0003958 ... P00388 41562286
    964287 9ef0:A (3.33) BS02 FAD N/A GO:0003958 ... P00388 41562286
    964288 9ef1:A (4.4) BS01 peptide N/A GO:0004672 ... P09208 41152236
    964289 9ef1:B (4.4) BS01 peptide N/A GO:0004672 ... P09208 41152236
    964290 9ef1:B (4.4) BS02 peptide N/A GO:0004672 ... P09208 41152236
    964291 9ef2:A (3.36) BS01 CA N/A GO:0007155 ... P08648 40489013
    964292 9ef2:A (3.36) BS02 CA N/A GO:0007155 ... P08648 40489013
    964293 9ef2:A (3.36) BS03 CA N/A GO:0007155 ... P08648 40489013
    964294 9ef2:B (3.36) BS01 MN N/A N/A P05556 40489013
    964295 9ef2:B (3.36) BS02 MN N/A N/A P05556 40489013
    964296 9ef2:B (3.36) BS03 MN N/A N/A P05556 40489013
    964297 9ef4:A (3.9) BS01 peptide N/A GO:0004672 ... P09208 41152236
    964298 9ef4:A (3.9) BS02 peptide N/A GO:0004672 ... P09208 41152236
    964299 9ef4:A (3.9) BS03 peptide N/A GO:0004672 ... P09208 41152236
    964300 9ef4:B (3.9) BS01 peptide N/A GO:0004672 ... P09208 41152236
    964301 9ef4:B (3.9) BS02 peptide N/A GO:0004672 ... P09208 41152236
    964302 9ef4:B (3.9) BS03 peptide N/A GO:0004672 ... P09208 41152236
    964303 9ef5:A (3.7) BS01 peptide N/A GO:0004672 ... P09208 41152236
    964304 9ef5:B (3.7) BS01 peptide N/A GO:0004672 ... P09208 41152236
    964305 9ef5:B (3.7) BS02 peptide N/A GO:0004672 ... P09208 41152236
    964306 9ef6:A (1.95) BS01 MYA N/A GO:0004379 ... Q5CV46 N/A
    964307 9ef6:A (1.95) BS02 A1BHP N/A GO:0004379 ... Q5CV46 N/A
    964308 9ef6:B (1.95) BS01 MYA N/A GO:0004379 ... Q5CV46 N/A
    964309 9ef7:A (1.8) BS01 MYA N/A GO:0004379 ... Q5CV46 N/A
    964310 9ef7:A (1.8) BS02 A1BHQ N/A GO:0004379 ... Q5CV46 N/A
    964311 9ef7:B (1.8) BS01 MYA N/A GO:0004379 ... Q5CV46 N/A
    964312 9ef8:A (2.21) BS01 MYA N/A GO:0004379 ... Q5CV46 N/A
    964313 9ef8:A (2.21) BS02 A1BHR N/A GO:0004379 ... Q5CV46 N/A
    964314 9ef9:A (3.6) BS01 peptide N/A GO:0004672 ... P09208 41152236
    964315 9ef9:A (3.6) BS02 peptide N/A GO:0004672 ... P09208 41152236
    964316 9ef9:A (3.6) BS03 peptide N/A GO:0004672 ... P09208 41152236
    964317 9ef9:A (3.6) BS04 peptide N/A GO:0004672 ... P09208 41152236
    964318 9ef9:A (3.6) BS05 peptide N/A GO:0004672 ... P09208 41152236
    964319 9ef9:B (3.6) BS01 peptide N/A GO:0004672 ... P09208 41152236
    964320 9ef9:B (3.6) BS02 peptide N/A GO:0004672 ... P09208 41152236
    964321 9ef9:B (3.6) BS03 peptide N/A GO:0004672 ... P09208 41152236
    964322 9ef9:B (3.6) BS04 peptide N/A GO:0004672 ... P09208 41152236
    964323 9efa:A (2.8) BS01 ZN N/A N/A N/A 41659642
    964324 9efa:A (2.8) BS02 ZN N/A N/A N/A 41659642
    964325 9efa:B (2.8) BS01 ZN N/A N/A N/A 41659642
    964326 9efa:B (2.8) BS02 ZN N/A N/A N/A 41659642
    964327 9efb:A (2.4) BS01 ZN N/A N/A N/A 41659642
    964328 9efb:A (2.4) BS02 ZN N/A N/A N/A 41659642
    964329 9efb:B (2.4) BS01 ZN N/A N/A N/A 41659642
    964330 9efb:B (2.4) BS02 ZN N/A N/A N/A 41659642
    964331 9efc:A (1.26) BS01 A1BHY N/A N/A F8W4B7 40864867
    964332 9efc:A (1.26) BS02 ZN N/A N/A F8W4B7 40864867
    964333 9efc:B (1.26) BS01 A1BHY N/A N/A F8W4B7 40864867
    964334 9efc:B (1.26) BS02 ZN N/A N/A F8W4B7 40864867
    964335 9eff:A (1.82) BS01 dna N/A N/A F0NFD3 40473630
    964336 9eff:A (1.82) BS02 dna N/A N/A F0NFD3 40473630
    964337 9eff:B (1.82) BS01 dna N/A N/A F0NFD3 40473630
    964338 9eff:B (1.82) BS02 dna N/A N/A F0NFD3 40473630
    964339 9efj:A (1.82) BS01 A1BI3 N/A N/A Q07820 41223148
    964340 9efl:A (2.0) BS01 CA N/A N/A N/A N/A
    964341 9efm:K (3.16) BS01 ZN N/A GO:0000082 ... P62877 41673158
    964342 9efm:K (3.16) BS02 ZN N/A GO:0000082 ... P62877 41673158
    964343 9efm:K (3.16) BS03 ZN N/A GO:0000082 ... P62877 41673158
    964344 9efq:K (2.96) BS01 ZN N/A GO:0000082 ... P62877 41673158
    964345 9efq:K (2.96) BS02 ZN N/A GO:0000082 ... P62877 41673158
    964346 9efq:K (2.96) BS03 ZN N/A GO:0000082 ... P62877 41673158
    964347 9efr:A (1.24) BS01 A1BHX N/A N/A F8W4B7 40864867
    964348 9efr:A (1.24) BS02 ZN N/A N/A F8W4B7 40864867
    964349 9efr:B (1.24) BS01 A1BHX N/A N/A F8W4B7 40864867
    964350 9efr:B (1.24) BS02 ZN N/A N/A F8W4B7 40864867
    964351 9efu:A (2.92) BS01 SF4 N/A GO:0005524 ... B9KK24 40274796
    964352 9efu:A (2.92) BS02 PMR N/A GO:0005524 ... B9KK24 40274796
    964353 9efu:B (2.92) BS01 SF4 N/A GO:0015995 ... B9KK25 40274796
    964354 9efu:B (2.92) BS02 PMR N/A GO:0015995 ... B9KK25 40274796
    964355 9efu:C (2.92) BS01 SF4 N/A GO:0005524 ... B9KK24 40274796
    964356 9efu:C (2.92) BS02 PMR N/A GO:0005524 ... B9KK24 40274796
    964357 9efu:D (2.92) BS01 SF4 N/A GO:0015995 ... B9KK25 40274796
    964358 9efu:D (2.92) BS02 PMR N/A GO:0015995 ... B9KK25 40274796
    964359 9efu:D (2.92) BS03 CU N/A GO:0015995 ... B9KK25 40274796
    964360 9efv:E (3.03) BS01 6LT N/A GO:0000338 ... Q92905 41673158
    964361 9efv:E (3.03) BS02 ZN N/A GO:0000338 ... Q92905 41673158
    964362 9efv:K (3.03) BS01 ZN N/A GO:0000082 ... P62877 41673158
    964363 9efv:K (3.03) BS02 ZN N/A GO:0000082 ... P62877 41673158
    964364 9efv:K (3.03) BS03 ZN N/A GO:0000082 ... P62877 41673158
    964365 9efw:A (2.2) BS01 dna N/A GO:0003700 ... P40466 40990245
    964366 9efw:A (2.2) BS02 dna N/A GO:0003700 ... P40466 40990245
    964367 9efw:B (2.2) BS01 dna N/A GO:0003700 ... P40466 40990245
    964368 9efw:B (2.2) BS02 dna N/A GO:0003700 ... P40466 40990245
    964369 9efw:B (2.2) BS03 dna N/A GO:0003700 ... P40466 40990245
    964370 9efx:A (1.262) BS01 ZN N/A N/A F8W4B7 40864867
    964371 9efx:A (1.262) BS02 A1BHW N/A N/A F8W4B7 40864867
    964372 9efx:B (1.262) BS01 ZN N/A N/A F8W4B7 40864867
    964373 9efx:B (1.262) BS02 A1BHW N/A N/A F8W4B7 40864867
    964374 9efx:C (1.262) BS01 ZN N/A N/A F8W4B7 40864867
    964375 9efx:C (1.262) BS02 A1BHW N/A N/A F8W4B7 40864867
    964376 9efz:A (1.95) BS01 CA N/A GO:0005254 ... A0A8V0ZZU7 40249777
    964377 9efz:A (1.95) BS02 ABU N/A GO:0005254 ... A0A8V0ZZU7 40249777
    964378 9efz:A (1.95) BS03 ABU N/A GO:0005254 ... A0A8V0ZZU7 40249777
    964379 9efz:B (1.95) BS01 ABU N/A GO:0005254 ... A0A8V0ZZU7 40249777
    964380 9efz:B (1.95) BS02 CA N/A GO:0005254 ... A0A8V0ZZU7 40249777
    964381 9efz:B (1.95) BS03 ABU N/A GO:0005254 ... A0A8V0ZZU7 40249777
    964382 9efz:C (1.95) BS01 ABU N/A GO:0005254 ... A0A8V0ZZU7 40249777
    964383 9efz:C (1.95) BS02 CA N/A GO:0005254 ... A0A8V0ZZU7 40249777
    964384 9efz:C (1.95) BS03 ABU N/A GO:0005254 ... A0A8V0ZZU7 40249777
    964385 9efz:D (1.95) BS01 ABU N/A GO:0005254 ... A0A8V0ZZU7 40249777
    964386 9efz:D (1.95) BS02 CA N/A GO:0005254 ... A0A8V0ZZU7 40249777
    964387 9efz:D (1.95) BS03 ABU N/A GO:0005254 ... A0A8V0ZZU7 40249777
    964388 9efz:E (1.95) BS01 ABU N/A GO:0005254 ... A0A8V0ZZU7 40249777
    964389 9efz:E (1.95) BS02 ABU N/A GO:0005254 ... A0A8V0ZZU7 40249777
    964390 9efz:E (1.95) BS03 CA N/A GO:0005254 ... A0A8V0ZZU7 40249777
    964391 9eg1:K (3.52) BS01 ZN N/A GO:0005507 ... Q9UBF6 41673158
    964392 9eg1:K (3.52) BS02 ZN N/A GO:0005507 ... Q9UBF6 41673158
    964393 9eg1:K (3.52) BS03 ZN N/A GO:0005507 ... Q9UBF6 41673158
    964394 9eg7:A (1.5) BS01 E6C N/A GO:0006508 ... P00784 40346252
    964395 9eg8:K (3.39) BS01 ZN N/A GO:0000082 ... P62877 41673158
    964396 9eg8:K (3.39) BS02 ZN N/A GO:0000082 ... P62877 41673158
    964397 9eg8:K (3.39) BS03 ZN N/A GO:0000082 ... P62877 41673158
    964398 9eg9:A (1.31) BS01 FMN N/A GO:0004152 ... Q02127 40686985
    964399 9eg9:A (1.31) BS02 A1BIJ N/A GO:0004152 ... Q02127 40686985
    964400 9ega:A (1.35) BS01 MG N/A GO:0001681 ... A0A4R2HIK5 40745183

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).