SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4818 4819 4820 4821 4822 4823 4824 4825 4826 4827 4828 4829 4830 4831 4832 4833 4834 4835 4836 4837 4838 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    965401 9emu:A (1.4) BS01 RS3 N/A GO:0005737 ... K4R812 39097184
    965402 9emu:A (1.4) BS02 PO4 N/A GO:0005737 ... K4R812 39097184
    965403 9emu:A (1.4) BS03 RS3 N/A GO:0005737 ... K4R812 39097184
    965404 9emu:B (1.4) BS01 RS3 N/A GO:0005737 ... K4R812 39097184
    965405 9emu:B (1.4) BS02 RS3 N/A GO:0005737 ... K4R812 39097184
    965406 9emu:B (1.4) BS03 PO4 N/A GO:0005737 ... K4R812 39097184
    965407 9emu:C (1.4) BS01 RS3 N/A GO:0005737 ... K4R812 39097184
    965408 9emu:C (1.4) BS02 PO4 N/A GO:0005737 ... K4R812 39097184
    965409 9emu:C (1.4) BS03 RS3 N/A GO:0005737 ... K4R812 39097184
    965410 9emu:D (1.4) BS01 RS3 N/A GO:0005737 ... K4R812 39097184
    965411 9emu:D (1.4) BS02 RS3 N/A GO:0005737 ... K4R812 39097184
    965412 9emu:D (1.4) BS03 PO4 N/A GO:0005737 ... K4R812 39097184
    965413 9emv:A (2.34) BS01 SGV 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0004483 ... P0DTD1 N/A
    965414 9emv:A (2.34) BS02 GTA 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0004483 ... P0DTD1 N/A
    965415 9emv:A (2.34) BS03 SAH 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0004483 ... P0DTD1 N/A
    965416 9emv:A (2.34) BS04 V9G 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0004483 ... P0DTD1 N/A
    965417 9emv:B (2.34) BS01 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0003723 ... P0DTD1 N/A
    965418 9emv:B (2.34) BS02 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0003723 ... P0DTD1 N/A
    965419 9emw:A (2.51) BS01 IMH N/A GO:0009159 ... K9TVX3 41108030
    965420 9emw:C (2.51) BS01 IMH N/A GO:0009159 ... K9TVX3 41108030
    965421 9emw:D (2.51) BS01 IMH N/A GO:0009159 ... K9TVX3 41108030
    965422 9emx:A (1.77) BS01 3AD N/A GO:0009159 ... K9TVX3 41108030
    965423 9emx:A (1.77) BS02 3AD N/A GO:0009159 ... K9TVX3 41108030
    965424 9emx:B (1.77) BS01 3AD N/A GO:0009159 ... K9TVX3 41108030
    965425 9emx:B (1.77) BS02 3AD N/A GO:0009159 ... K9TVX3 41108030
    965426 9emx:C (1.77) BS01 3AD N/A GO:0009159 ... K9TVX3 41108030
    965427 9emx:C (1.77) BS02 3AD N/A GO:0009159 ... K9TVX3 41108030
    965428 9emx:D (1.77) BS01 3AD N/A GO:0009159 ... K9TVX3 41108030
    965429 9emx:D (1.77) BS02 3AD N/A GO:0009159 ... K9TVX3 41108030
    965430 9emy:A (2.814) BS01 AGS N/A GO:0004672 ... A0A2I0BRS6 40389650
    965431 9emy:B (2.814) BS01 AGS N/A GO:0004672 ... A0A2I0BRS6 40389650
    965432 9emy:G (2.814) BS01 AGS N/A GO:0004672 ... A0A2I0BRS6 40389650
    965433 9emy:H (2.814) BS01 AGS N/A GO:0004672 ... A0A2I0BRS6 40389650
    965434 9emz:A (3.0) BS01 peptide N/A GO:0004175 ... Q9HVM5 40119522
    965435 9emz:A (3.0) BS02 peptide N/A GO:0004175 ... Q9HVM5 40119522
    965436 9emz:B (3.0) BS01 peptide N/A GO:0004175 ... Q9HVM5 40119522
    965437 9emz:C (3.0) BS01 peptide N/A GO:0004175 ... Q9HVM5 40119522
    965438 9emz:C (3.0) BS02 peptide N/A GO:0004175 ... Q9HVM5 40119522
    965439 9emz:D (3.0) BS01 peptide N/A GO:0004175 ... Q9HVM5 40119522
    965440 9emz:D (3.0) BS02 peptide N/A GO:0004175 ... Q9HVM5 40119522
    965441 9en0:A (2.51) BS01 dna N/A GO:0000166 ... D0VWU9 N/A
    965442 9en0:A (2.51) BS02 dna N/A GO:0000166 ... D0VWU9 N/A
    965443 9en0:A (2.51) BS03 MG N/A GO:0000166 ... D0VWU9 N/A
    965444 9en0:A (2.51) BS04 MG N/A GO:0000166 ... D0VWU9 N/A
    965445 9en0:A (2.51) BS05 MG N/A GO:0000166 ... D0VWU9 N/A
    965446 9en0:A (2.51) BS06 MG N/A GO:0000166 ... D0VWU9 N/A
    965447 9en2:A (2.2) BS01 CA N/A N/A Q15113 38901640
    965448 9en2:A (2.2) BS02 CA N/A N/A Q15113 38901640
    965449 9en3:A (1.4) BS01 HIS N/A GO:0016747 ... Q8N8M0 40595645
    965450 9en3:A (1.4) BS02 A2U N/A GO:0016747 ... Q8N8M0 40595645
    965451 9en8:A (1.1) BS01 ZN N/A GO:0004064 ... P00918 N/A
    965452 9en8:A (1.1) BS02 A1H53 N/A GO:0004064 ... P00918 N/A
    965453 9en8:A (1.1) BS03 A1H53 N/A GO:0004064 ... P00918 N/A
    965454 9en9:A (2.02) BS01 A1H53 N/A GO:0004064 ... P00918 N/A
    965455 9en9:A (2.02) BS02 ZN N/A GO:0004064 ... P00918 N/A
    965456 9ena:A (1.7) BS01 MG N/A GO:0004336 ... P04062 40425544
    965457 9enb:A (2.66) BS01 rna N/A GO:0001522 ... Q9BZE2 38996458
    965458 9enb:A (2.66) BS02 rna N/A GO:0001522 ... Q9BZE2 38996458
    965459 9enb:B (2.66) BS01 rna N/A GO:0001522 ... Q9BZE2 38996458
    965460 9enb:B (2.66) BS02 rna N/A GO:0001522 ... Q9BZE2 38996458
    965461 9enc:A (3.36) BS01 rna N/A GO:0001522 ... Q9BZE2 38996458
    965462 9enc:B (3.36) BS01 rna N/A GO:0001522 ... Q9BZE2 38996458
    965463 9end:A (1.95) BS01 NDP N/A GO:0003824 ... Q8TWG5 39834309
    965464 9end:B (1.95) BS01 NDP N/A GO:0003824 ... Q8TWG5 39834309
    965465 9ene:A (3.15) BS01 rna N/A GO:0001522 ... Q9BZE2 38996458
    965466 9ene:A (3.15) BS02 rna N/A GO:0001522 ... Q9BZE2 38996458
    965467 9ene:B (3.15) BS01 rna N/A GO:0001522 ... Q9BZE2 38996458
    965468 9ene:B (3.15) BS02 rna N/A GO:0001522 ... Q9BZE2 38996458
    965469 9enf:A (2.97) BS01 rna N/A GO:0001522 ... Q9BZE2 38996458
    965470 9enf:A (2.97) BS02 rna N/A GO:0001522 ... Q9BZE2 38996458
    965471 9enf:B (2.97) BS01 rna N/A GO:0001522 ... Q9BZE2 38996458
    965472 9enf:B (2.97) BS02 rna N/A GO:0001522 ... Q9BZE2 38996458
    965473 9eng:A (2.2) BS01 MN N/A GO:0005737 ... A6T5R0 39236497
    965474 9eng:A (2.2) BS02 MN N/A GO:0005737 ... A6T5R0 39236497
    965475 9eng:A (2.2) BS03 A1H55 N/A GO:0005737 ... A6T5R0 39236497
    965476 9enh:A (2.3) BS01 FAD N/A GO:0001716 ... S4S6Z0 39152524
    965477 9enh:B (2.3) BS01 FAD N/A GO:0001716 ... S4S6Z0 39152524
    965478 9enh:C (2.3) BS01 FAD N/A GO:0001716 ... S4S6Z0 39152524
    965479 9enh:D (2.3) BS01 FAD N/A GO:0001716 ... S4S6Z0 39152524
    965480 9eni:A (2.1) BS01 FDA N/A GO:0001716 ... S4S6Z0 39152524
    965481 9eni:A (2.1) BS02 GLN N/A GO:0001716 ... S4S6Z0 39152524
    965482 9eni:B (2.1) BS01 FDA N/A GO:0001716 ... S4S6Z0 39152524
    965483 9eni:B (2.1) BS02 GLN N/A GO:0001716 ... S4S6Z0 39152524
    965484 9eni:C (2.1) BS01 FDA N/A GO:0001716 ... S4S6Z0 39152524
    965485 9eni:C (2.1) BS02 GLN N/A GO:0001716 ... S4S6Z0 39152524
    965486 9eni:D (2.1) BS01 FDA N/A GO:0001716 ... S4S6Z0 39152524
    965487 9eni:D (2.1) BS02 GLN N/A GO:0001716 ... S4S6Z0 39152524
    965488 9enj:A (2.1) BS01 FDA N/A GO:0001716 ... S4S6Z0 39152524
    965489 9enj:A (2.1) BS02 GLU N/A GO:0001716 ... S4S6Z0 39152524
    965490 9enj:B (2.1) BS01 FDA N/A GO:0001716 ... S4S6Z0 39152524
    965491 9enj:B (2.1) BS02 GLU N/A GO:0001716 ... S4S6Z0 39152524
    965492 9enj:C (2.1) BS01 FDA N/A GO:0001716 ... S4S6Z0 39152524
    965493 9enj:C (2.1) BS02 GLU N/A GO:0001716 ... S4S6Z0 39152524
    965494 9enj:D (2.1) BS01 FDA N/A GO:0001716 ... S4S6Z0 39152524
    965495 9enj:D (2.1) BS02 GLU N/A GO:0001716 ... S4S6Z0 39152524
    965496 9enk:A (2.2) BS01 FDA N/A GO:0001716 ... S4S6Z0 39152524
    965497 9enk:A (2.2) BS02 PHE N/A GO:0001716 ... S4S6Z0 39152524
    965498 9enk:B (2.2) BS01 FDA N/A GO:0001716 ... S4S6Z0 39152524
    965499 9enk:B (2.2) BS02 PHE N/A GO:0001716 ... S4S6Z0 39152524
    965500 9enk:C (2.2) BS01 FDA N/A GO:0001716 ... S4S6Z0 39152524
    965501 9enk:C (2.2) BS02 PHE N/A GO:0001716 ... S4S6Z0 39152524
    965502 9enk:D (2.2) BS01 FDA N/A GO:0001716 ... S4S6Z0 39152524
    965503 9enk:D (2.2) BS02 PHE N/A GO:0001716 ... S4S6Z0 39152524
    965504 9enn:A (1.8) BS01 FDA N/A GO:0001716 ... S4S6Z0 39152524
    965505 9enn:A (1.8) BS02 ALY N/A GO:0001716 ... S4S6Z0 39152524
    965506 9enn:B (1.8) BS01 FDA N/A GO:0001716 ... S4S6Z0 39152524
    965507 9enn:B (1.8) BS02 ALY N/A GO:0001716 ... S4S6Z0 39152524
    965508 9enn:C (1.8) BS01 FDA N/A GO:0001716 ... S4S6Z0 39152524
    965509 9enn:C (1.8) BS02 ALY N/A GO:0001716 ... S4S6Z0 39152524
    965510 9enn:D (1.8) BS01 FDA N/A GO:0001716 ... S4S6Z0 39152524
    965511 9enn:D (1.8) BS02 ALY N/A GO:0001716 ... S4S6Z0 39152524
    965512 9enp:A (2.12) BS01 dna 2.7.7.7
    3.1.26.4
    GO:0000166 ... P04293 38806233
    965513 9enp:A (2.12) BS02 dna 2.7.7.7
    3.1.26.4
    GO:0000166 ... P04293 38806233
    965514 9enp:A (2.12) BS03 CA 2.7.7.7
    3.1.26.4
    GO:0000166 ... P04293 38806233
    965515 9enp:A (2.12) BS04 CA 2.7.7.7
    3.1.26.4
    GO:0000166 ... P04293 38806233
    965516 9enp:B (2.12) BS01 dna ? GO:0003677 ... P10226 38806233
    965517 9enp:B (2.12) BS02 dna ? GO:0003677 ... P10226 38806233
    965518 9enq:A (2.12) BS01 dna 2.7.7.7
    3.1.26.4
    GO:0000166 ... P04293 38806233
    965519 9enq:A (2.12) BS02 CA 2.7.7.7
    3.1.26.4
    GO:0000166 ... P04293 38806233
    965520 9enq:A (2.12) BS03 CA 2.7.7.7
    3.1.26.4
    GO:0000166 ... P04293 38806233
    965521 9ent:A (2.2) BS01 5JK N/A GO:0003676 ... Q64610 39008358
    965522 9ent:A (2.2) BS02 ZN N/A GO:0003676 ... Q64610 39008358
    965523 9ent:A (2.2) BS03 ZN N/A GO:0003676 ... Q64610 39008358
    965524 9ent:A (2.2) BS04 CA N/A GO:0003676 ... Q64610 39008358
    965525 9enx:A (1.23) BS01 M9W N/A GO:0008800 ... Q09HD0 N/A
    965526 9enx:B (1.23) BS01 M9W N/A GO:0008800 ... Q09HD0 N/A
    965527 9eny:A (1.47) BS01 MDD N/A GO:0008800 ... Q9KJY7 N/A
    965528 9eny:B (1.47) BS01 A1H57 N/A GO:0008800 ... Q9KJY7 N/A
    965529 9eny:B (1.47) BS02 MDD N/A GO:0008800 ... Q9KJY7 N/A
    965530 9enz:AAA (1.6) BS01 PT 3.2.1.17 GO:0003796 ... P00698 38727007
    965531 9eo0:A (2.5) BS01 A1H56 N/A N/A Q9NZQ7 38894909
    965532 9eo0:B (2.5) BS01 A1H56 N/A N/A Q9NZQ7 38894909
    965533 9eo0:C (2.5) BS01 A1H56 N/A N/A Q9NZQ7 38894909
    965534 9eo0:D (2.5) BS01 A1H56 N/A N/A Q9NZQ7 38894909
    965535 9eo0:E (2.5) BS01 A1H56 N/A N/A Q9NZQ7 38894909
    965536 9eo0:F (2.5) BS01 A1H56 N/A N/A Q9NZQ7 38894909
    965537 9eo1:A (3.2) BS01 dna N/A GO:0003676 ... Q9Y2M0 40368883
    965538 9eo1:A (3.2) BS02 dna N/A GO:0003676 ... Q9Y2M0 40368883
    965539 9eo1:A (3.2) BS03 dna N/A GO:0003676 ... Q9Y2M0 40368883
    965540 9eo4:B (2.66) BS01 CLR N/A GO:0001504 ... Q01959 39112703
    965541 9eo4:B (2.66) BS02 Y01 N/A GO:0001504 ... Q01959 39112703
    965542 9eo4:B (2.66) BS03 CLR N/A GO:0001504 ... Q01959 39112703
    965543 9eo4:B (2.66) BS04 CLR N/A GO:0001504 ... Q01959 39112703
    965544 9eo4:B (2.66) BS05 NA N/A GO:0001504 ... Q01959 39112703
    965545 9eo4:B (2.66) BS06 COC N/A GO:0001504 ... Q01959 39112703
    965546 9eo6:A (2.11) BS01 peptide N/A GO:0008233 ... P0DTD1 39194208
    965547 9eo6:B (2.11) BS01 peptide N/A GO:0008233 ... P0DTD1 39194208
    965548 9eo6:B (2.11) BS02 peptide N/A GO:0008233 ... P0DTD1 39194208
    965549 9eo6:C (2.11) BS01 peptide N/A GO:0008233 ... P0DTD1 39194208
    965550 9eo6:D (2.11) BS01 peptide N/A GO:0008233 ... P0DTD1 39194208
    965551 9eo6:E (2.11) BS01 peptide N/A GO:0008233 ... P0DTD1 39194208
    965552 9eo6:F (2.11) BS01 peptide N/A GO:0008233 ... P0DTD1 39194208
    965553 9eo6:F (2.11) BS02 peptide N/A GO:0008233 ... P0DTD1 39194208
    965554 9eo8:BBB (1.76) BS01 NH3 4.6.1.18 GO:0003676 ... P61823 38727007
    965555 9eo8:BBB (1.76) BS02 PT 4.6.1.18 GO:0003676 ... P61823 38727007
    965556 9eoa:A (3.27) BS01 dna N/A GO:0003676 ... Q9Y2M0 40368883
    965557 9eoa:A (3.27) BS02 dna N/A GO:0003676 ... Q9Y2M0 40368883
    965558 9eoa:A (3.27) BS03 dna N/A GO:0003676 ... Q9Y2M0 40368883
    965559 9eoc:B (3.3) BS01 MG ? GO:0005515 ... Q96SY0 38823386
    965560 9eod:A (1.9) BS01 A1H6A N/A GO:0005615 ... P02768 N/A
    965561 9eod:A (1.9) BS02 A1H6A N/A GO:0005615 ... P02768 N/A
    965562 9eod:B (1.9) BS01 A1H6A N/A GO:0005615 ... P02768 N/A
    965563 9eok:A (23.0) BS01 GTP N/A GO:0005200 ... Q5U4V6 38600243
    965564 9eok:B (23.0) BS01 GDP N/A GO:0000226 ... P30883 38600243
    965565 9eok:B (23.0) BS02 TA1 N/A GO:0000226 ... P30883 38600243
    965566 9eok:C (23.0) BS01 GTP N/A GO:0005200 ... Q5U4V6 38600243
    965567 9eok:D (23.0) BS01 GTP N/A GO:0005200 ... Q5U4V6 38600243
    965568 9eok:E (23.0) BS01 GTP N/A GO:0005200 ... Q5U4V6 38600243
    965569 9eok:F (23.0) BS01 TA1 N/A GO:0000226 ... P30883 38600243
    965570 9eok:F (23.0) BS02 GDP N/A GO:0000226 ... P30883 38600243
    965571 9eok:G (23.0) BS01 GTP N/A GO:0005200 ... Q5U4V6 38600243
    965572 9eok:H (23.0) BS01 GTP N/A GO:0005200 ... Q5U4V6 38600243
    965573 9eok:I (23.0) BS01 GTP N/A GO:0005200 ... Q5U4V6 38600243
    965574 9eok:J (23.0) BS01 GTP N/A GO:0005200 ... Q5U4V6 38600243
    965575 9eok:K (23.0) BS01 GTP N/A GO:0005200 ... Q5U4V6 38600243
    965576 9eok:L (23.0) BS01 GTP N/A GO:0005200 ... Q5U4V6 38600243
    965577 9eok:M (23.0) BS01 GTP N/A GO:0005200 ... Q5U4V6 38600243
    965578 9eok:N (23.0) BS01 GTP N/A GO:0005200 ... Q5U4V6 38600243
    965579 9eok:O (23.0) BS01 GTP N/A GO:0005200 ... Q5U4V6 38600243
    965580 9eok:P (23.0) BS01 GTP N/A GO:0005200 ... Q5U4V6 38600243
    965581 9eok:Q (23.0) BS01 GDP N/A GO:0000226 ... P30883 38600243
    965582 9eok:Q (23.0) BS02 TA1 N/A GO:0000226 ... P30883 38600243
    965583 9eok:R (23.0) BS01 GDP N/A GO:0000226 ... P30883 38600243
    965584 9eok:R (23.0) BS02 TA1 N/A GO:0000226 ... P30883 38600243
    965585 9eok:S (23.0) BS01 GDP N/A GO:0000226 ... P30883 38600243
    965586 9eok:S (23.0) BS02 TA1 N/A GO:0000226 ... P30883 38600243
    965587 9eok:T (23.0) BS01 GDP N/A GO:0000226 ... P30883 38600243
    965588 9eok:T (23.0) BS02 TA1 N/A GO:0000226 ... P30883 38600243
    965589 9eok:U (23.0) BS01 TA1 N/A GO:0000226 ... P30883 38600243
    965590 9eok:U (23.0) BS02 GDP N/A GO:0000226 ... P30883 38600243
    965591 9eok:V (23.0) BS01 GDP N/A GO:0000226 ... P30883 38600243
    965592 9eok:V (23.0) BS02 TA1 N/A GO:0000226 ... P30883 38600243
    965593 9eok:W (23.0) BS01 GDP N/A GO:0000226 ... P30883 38600243
    965594 9eok:W (23.0) BS02 TA1 N/A GO:0000226 ... P30883 38600243
    965595 9eok:X (23.0) BS01 GDP N/A GO:0000226 ... P30883 38600243
    965596 9eok:X (23.0) BS02 TA1 N/A GO:0000226 ... P30883 38600243
    965597 9eok:Y (23.0) BS01 GDP N/A GO:0000226 ... P30883 38600243
    965598 9eok:Y (23.0) BS02 TA1 N/A GO:0000226 ... P30883 38600243
    965599 9eok:Z (23.0) BS01 GDP N/A GO:0000226 ... P30883 38600243
    965600 9eok:Z (23.0) BS02 TA1 N/A GO:0000226 ... P30883 38600243

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).