SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    965601 9eok:a (23.0) BS01 GDP N/A GO:0000226 ... P30883 38600243
    965602 9eok:a (23.0) BS02 TA1 N/A GO:0000226 ... P30883 38600243
    965603 9eok:b (23.0) BS01 GDP N/A GO:0000226 ... P30883 38600243
    965604 9eok:b (23.0) BS02 TA1 N/A GO:0000226 ... P30883 38600243
    965605 9eok:c (23.0) BS01 GTP N/A GO:0005200 ... Q5U4V6 38600243
    965606 9eok:d (23.0) BS01 GTP N/A GO:0005200 ... Q5U4V6 38600243
    965607 9eok:e (23.0) BS01 GTP N/A GO:0005200 ... Q5U4V6 38600243
    965608 9eok:f (23.0) BS01 GTP N/A GO:0005200 ... Q5U4V6 38600243
    965609 9eok:g (23.0) BS01 GTP N/A GO:0005200 ... Q5U4V6 38600243
    965610 9eok:h (23.0) BS01 GTP N/A GO:0005200 ... Q5U4V6 38600243
    965611 9eok:i (23.0) BS01 GTP N/A GO:0005200 ... Q5U4V6 38600243
    965612 9eok:j (23.0) BS01 GTP N/A GO:0005200 ... Q5U4V6 38600243
    965613 9eok:k (23.0) BS01 GTP N/A GO:0005200 ... Q5U4V6 38600243
    965614 9eok:o (23.0) BS01 GDP N/A GO:0000226 ... P30883 38600243
    965615 9eok:o (23.0) BS02 TA1 N/A GO:0000226 ... P30883 38600243
    965616 9eok:p (23.0) BS01 GDP N/A GO:0000226 ... P30883 38600243
    965617 9eok:p (23.0) BS02 TA1 N/A GO:0000226 ... P30883 38600243
    965618 9eok:q (23.0) BS01 GDP N/A GO:0000226 ... P30883 38600243
    965619 9eok:q (23.0) BS02 TA1 N/A GO:0000226 ... P30883 38600243
    965620 9eok:r (23.0) BS01 GDP N/A GO:0000226 ... P30883 38600243
    965621 9eok:r (23.0) BS02 TA1 N/A GO:0000226 ... P30883 38600243
    965622 9eok:s (23.0) BS01 GDP N/A GO:0000226 ... P30883 38600243
    965623 9eok:s (23.0) BS02 TA1 N/A GO:0000226 ... P30883 38600243
    965624 9eol:A (1.69) BS01 6PG N/A GO:0005829 ... Q9K3V1 N/A
    965625 9eol:B (1.69) BS01 6PG N/A GO:0005829 ... Q9K3V1 N/A
    965626 9eor:A (2.25) BS01 peptide N/A GO:0008233 ... P0DTD1 39194208
    965627 9eor:B (2.25) BS01 peptide N/A GO:0008233 ... P0DTD1 39194208
    965628 9eor:B (2.25) BS02 peptide N/A GO:0008233 ... P0DTD1 39194208
    965629 9eor:C (2.25) BS01 peptide N/A GO:0008233 ... P0DTD1 39194208
    965630 9eor:D (2.25) BS01 peptide N/A GO:0008233 ... P0DTD1 39194208
    965631 9eor:E (2.25) BS01 peptide N/A GO:0008233 ... P0DTD1 39194208
    965632 9eor:F (2.25) BS01 peptide N/A GO:0008233 ... P0DTD1 39194208
    965633 9eor:F (2.25) BS02 peptide N/A GO:0008233 ... P0DTD1 39194208
    965634 9eou:A (1.55) BS01 peptide N/A N/A O14786 38871237
    965635 9eov:A (1.8) BS01 HEC N/A N/A Q8EG34 40725986
    965636 9eov:A (1.8) BS02 HEC N/A N/A Q8EG34 40725986
    965637 9eov:A (1.8) BS03 HEC N/A N/A Q8EG34 40725986
    965638 9eov:A (1.8) BS04 HEC N/A N/A Q8EG34 40725986
    965639 9eov:A (1.8) BS05 HEC N/A N/A Q8EG34 40725986
    965640 9eov:A (1.8) BS06 MG N/A N/A Q8EG34 40725986
    965641 9eox:A (2.54) BS01 peptide N/A GO:0008233 ... P0DTD1 39194208
    965642 9eox:B (2.54) BS01 peptide N/A GO:0008233 ... P0DTD1 39194208
    965643 9eox:B (2.54) BS02 peptide N/A GO:0008233 ... P0DTD1 39194208
    965644 9eox:C (2.54) BS01 peptide N/A GO:0008233 ... P0DTD1 39194208
    965645 9eox:D (2.54) BS01 peptide N/A GO:0008233 ... P0DTD1 39194208
    965646 9eox:E (2.54) BS01 peptide N/A GO:0008233 ... P0DTD1 39194208
    965647 9eox:F (2.54) BS01 peptide N/A GO:0008233 ... P0DTD1 39194208
    965648 9eox:F (2.54) BS02 peptide N/A GO:0008233 ... P0DTD1 39194208
    965649 9eoy:C (2.1) BS01 A1H6K N/A GO:0004683 ... Q9UQM7 39275999
    965650 9eoy:D (2.1) BS01 A1H6K N/A GO:0004683 ... Q9UQM7 39275999
    965651 9eoz:A (3.1) BS01 dna N/A GO:0000978 ... O15527 39477986
    965652 9eoz:A (3.1) BS02 dna N/A GO:0000978 ... O15527 39477986
    965653 9eoz:B (3.1) BS01 dna N/A GO:0000781 ... P62805 39477986
    965654 9eoz:B (3.1) BS02 dna N/A GO:0000781 ... P62805 39477986
    965655 9eoz:E (3.1) BS01 dna N/A GO:0000776 ... P84243 39477986
    965656 9eoz:E (3.1) BS02 dna N/A GO:0000776 ... P84243 39477986
    965657 9eoz:F (3.1) BS01 dna N/A GO:0000781 ... P62805 39477986
    965658 9eoz:F (3.1) BS02 dna N/A GO:0000781 ... P62805 39477986
    965659 9eoz:G (3.1) BS01 dna N/A GO:0000786 ... Q93077 39477986
    965660 9eoz:G (3.1) BS02 dna N/A GO:0000786 ... Q93077 39477986
    965661 9eoz:H (3.1) BS01 dna N/A GO:0000786 ... P62807 39477986
    965662 9eoz:H (3.1) BS02 dna N/A GO:0000786 ... P62807 39477986
    965663 9eoz:K (3.1) BS01 dna N/A GO:0000776 ... P84243 39477986
    965664 9eoz:K (3.1) BS02 dna N/A GO:0000776 ... P84243 39477986
    965665 9eoz:L (3.1) BS01 dna N/A GO:0000786 ... Q93077 39477986
    965666 9eoz:L (3.1) BS02 dna N/A GO:0000786 ... Q93077 39477986
    965667 9eoz:M (3.1) BS01 dna N/A GO:0000786 ... P62807 39477986
    965668 9ep0:A (2.9) BS01 GDD N/A GO:0000271 ... Q8U4M3 N/A
    965669 9ep0:A (2.9) BS02 MG N/A GO:0000271 ... Q8U4M3 N/A
    965670 9ep0:A (2.9) BS03 EFS N/A GO:0000271 ... Q8U4M3 N/A
    965671 9ep0:A (2.9) BS04 MJC N/A GO:0000271 ... Q8U4M3 N/A
    965672 9ep2:AAA (1.47) BS01 ZN N/A GO:0004064 ... P00915 39031732
    965673 9ep2:AAA (1.47) BS02 A1H6C N/A GO:0004064 ... P00915 39031732
    965674 9ep2:BBB (1.47) BS01 ZN N/A GO:0004064 ... P00915 39031732
    965675 9ep2:BBB (1.47) BS02 A1H6C N/A GO:0004064 ... P00915 39031732
    965676 9ep3:A (3.08) BS01 peptide N/A N/A Q8N3U4 N/A
    965677 9ep3:B (3.08) BS01 peptide N/A GO:0007062 ... O60216 N/A
    965678 9ep8:A (2.63) BS01 A1H6L N/A GO:0004672 ... O75116 39297059
    965679 9ep8:B (2.63) BS01 A1H6L N/A GO:0004672 ... O75116 39297059
    965680 9ep8:C (2.63) BS01 A1H6L N/A GO:0004672 ... O75116 39297059
    965681 9ep8:D (2.63) BS01 A1H6L N/A GO:0004672 ... O75116 39297059
    965682 9epc:E (3.0) BS01 ZN N/A GO:0003677 ... A0A6C0M829 N/A
    965683 9epc:I (3.0) BS01 FE N/A GO:0004784 ... A0ABF7PQ09 N/A
    965684 9epc:K (3.0) BS01 CA N/A GO:0016301 ... N/A N/A
    965685 9epc:L (3.0) BS01 SAH N/A N/A N/A N/A
    965686 9epc:N (3.0) BS01 FE N/A GO:0004784 ... N/A N/A
    965687 9epc:S (3.0) BS01 CA N/A GO:0009507 ... A0ABF7PQ06 N/A
    965688 9epd:A (1.48) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    965689 9epd:B (1.48) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    965690 9epg:A (1.33) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    965691 9epg:B (1.33) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    965692 9eph:A (1.33) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    965693 9eph:B (1.33) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    965694 9epi:A (1.39) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    965695 9epi:B (1.39) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    965696 9epj:A (1.38) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    965697 9epj:B (1.38) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    965698 9epk:A (1.3) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    965699 9epk:B (1.3) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    965700 9epn:A (1.7) BS01 AGS N/A GO:0000155 ... P76339 39681306
    965701 9epn:A (1.7) BS02 GCH N/A GO:0000155 ... P76339 39681306
    965702 9epn:B (1.7) BS01 GCH N/A GO:0000155 ... P76339 39681306
    965703 9epn:B (1.7) BS02 AGS N/A GO:0000155 ... P76339 39681306
    965704 9epn:B (1.7) BS03 GCH N/A GO:0000155 ... P76339 39681306
    965705 9epo:A (1.9) BS01 Y01 N/A GO:0004888 ... O75084 39198452
    965706 9epo:A (1.9) BS02 Y01 N/A GO:0004888 ... O75084 39198452
    965707 9epo:A (1.9) BS03 Y01 N/A GO:0004888 ... O75084 39198452
    965708 9epo:D (1.9) BS01 Y01 N/A GO:0004888 ... O75084 39198452
    965709 9epo:D (1.9) BS02 Y01 N/A GO:0004888 ... O75084 39198452
    965710 9epo:D (1.9) BS03 Y01 N/A GO:0004888 ... O75084 39198452
    965711 9epp:R (4.06) BS01 A1H6M N/A GO:0004930 ... B1B1U5 39414813
    965712 9epq:R (4.15) BS01 A1H6M N/A GO:0004930 ... B1B1U5 39414813
    965713 9epr:R (4.9) BS01 RET N/A GO:0004930 ... B1B1U5 39414813
    965714 9epu:A (2.6) BS01 A1H6P N/A GO:0004672 ... O76039 N/A
    965715 9epv:A (2.3) BS01 A1H6H 2.7.11.1 GO:0004672 ... P68400 39067440
    965716 9epv:B (2.3) BS01 A1H6H 2.7.11.1 GO:0004672 ... P68400 39067440
    965717 9epw:B (2.3) BS01 A1H6F 2.7.11.1 GO:0004672 ... P68400 39067440
    965718 9epx:A (2.6) BS01 A1H6E 2.7.11.1 GO:0004672 ... P68400 39067440
    965719 9epx:B (2.6) BS01 A1H6E 2.7.11.1 GO:0004672 ... P68400 39067440
    965720 9epy:A (2.65) BS01 A1H6G 2.7.11.1 GO:0004672 ... P68400 39067440
    965721 9epy:B (2.65) BS01 A1H6G 2.7.11.1 GO:0004672 ... P68400 39067440
    965722 9epz:A (2.65) BS01 A1H6I 2.7.11.1 GO:0004672 ... P68400 39067440
    965723 9epz:B (2.65) BS01 A1H6I 2.7.11.1 GO:0004672 ... P68400 39067440
    965724 9eq0:A (3.15) BS01 A1H6D 2.7.11.1 GO:0004672 ... P68400 39067440
    965725 9eq0:B (3.15) BS01 A1H6D 2.7.11.1 GO:0004672 ... P68400 39067440
    965726 9eq1:A (3.0) BS01 A1H6J 2.7.11.1 GO:0004672 ... P68400 39067440
    965727 9eq1:B (3.0) BS01 A1H6J 2.7.11.1 GO:0004672 ... P68400 39067440
    965728 9eq2:A (3.68) BS01 ADP N/A GO:0000492 ... Q9FMR9 40015274
    965729 9eq2:B (3.68) BS01 ADP N/A GO:0000492 ... Q9FMR9 40015274
    965730 9eq2:C (3.68) BS01 ADP N/A GO:0000492 ... Q9FMR9 40015274
    965731 9eq5:A (2.17) BS01 PPH N/A GO:0003824 ... F0SIS6 38713131
    965732 9eq5:A (2.17) BS02 PPH N/A GO:0003824 ... F0SIS6 38713131
    965733 9eq5:B (2.17) BS01 PPH N/A GO:0003824 ... F0SIS6 38713131
    965734 9eq5:B (2.17) BS02 PPH N/A GO:0003824 ... F0SIS6 38713131
    965735 9eq5:C (2.17) BS01 PPH N/A GO:0003824 ... F0SIS6 38713131
    965736 9eq5:C (2.17) BS02 PPH N/A GO:0003824 ... F0SIS6 38713131
    965737 9eq5:D (2.17) BS01 PPH N/A GO:0003824 ... F0SIS6 38713131
    965738 9eq5:D (2.17) BS02 PPH N/A GO:0003824 ... F0SIS6 38713131
    965739 9eq7:A (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965740 9eq7:A (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    965741 9eq7:B (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965742 9eq7:B (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    965743 9eq7:C (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965744 9eq7:C (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    965745 9eq7:D (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965746 9eq7:D (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    965747 9eq7:E (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965748 9eq7:E (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    965749 9eq7:F (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965750 9eq7:F (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    965751 9eq7:G (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965752 9eq7:G (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    965753 9eq7:H (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965754 9eq7:H (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    965755 9eq7:I (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965756 9eq7:I (3.23) BS02 BDP N/A GO:0005198 ... P61116 38992036
    965757 9eq7:I (3.23) BS03 BGC N/A GO:0005198 ... P61116 38992036
    965758 9eq7:J (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965759 9eq7:J (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    965760 9eq7:K (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965761 9eq7:K (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    965762 9eq7:L (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965763 9eq7:L (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    965764 9eq7:M (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965765 9eq7:M (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    965766 9eq7:N (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965767 9eq7:N (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    965768 9eq7:O (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965769 9eq7:O (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    965770 9eq7:P (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965771 9eq7:P (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    965772 9eq7:Q (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965773 9eq7:Q (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    965774 9eq7:R (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965775 9eq7:R (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    965776 9eq7:S (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965777 9eq7:S (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    965778 9eq7:T (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965779 9eq7:T (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    965780 9eq7:U (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965781 9eq7:U (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    965782 9eq7:V (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965783 9eq7:V (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    965784 9eq7:W (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965785 9eq7:W (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    965786 9eq7:X (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965787 9eq7:X (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    965788 9eq7:Y (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965789 9eq7:Y (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    965790 9eq7:Z (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    965791 9eq7:Z (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    965792 9eq8:A (1.48) BS01 FE N/A GO:0006826 ... Q8N4E7 40223208
    965793 9eq8:A (1.48) BS02 FE N/A GO:0006826 ... Q8N4E7 40223208
    965794 9eq8:A (1.48) BS03 FE N/A GO:0006826 ... Q8N4E7 40223208
    965795 9eq8:A (1.48) BS04 MG N/A GO:0006826 ... Q8N4E7 40223208
    965796 9eq8:A (1.48) BS05 MG N/A GO:0006826 ... Q8N4E7 40223208
    965797 9eq8:A (1.48) BS06 MG N/A GO:0006826 ... Q8N4E7 40223208
    965798 9eq8:A (1.48) BS07 MG N/A GO:0006826 ... Q8N4E7 40223208
    965799 9eq8:A (1.48) BS08 MG N/A GO:0006826 ... Q8N4E7 40223208
    965800 9eq9:A (1.84) BS01 FE N/A GO:0006826 ... Q8N4E7 40223208

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).