SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    966201 9es6:A (3.0) BS02 BEF N/A GO:0001530 ... P10809 41256524
    966202 9es6:B (3.0) BS01 ADP N/A GO:0001530 ... P10809 41256524
    966203 9es6:B (3.0) BS02 BEF N/A GO:0001530 ... P10809 41256524
    966204 9es6:C (3.0) BS01 ADP N/A GO:0001530 ... P10809 41256524
    966205 9es6:C (3.0) BS02 BEF N/A GO:0001530 ... P10809 41256524
    966206 9es6:D (3.0) BS01 ADP N/A GO:0001530 ... P10809 41256524
    966207 9es6:D (3.0) BS02 BEF N/A GO:0001530 ... P10809 41256524
    966208 9es6:E (3.0) BS01 ADP N/A GO:0001530 ... P10809 41256524
    966209 9es6:E (3.0) BS02 BEF N/A GO:0001530 ... P10809 41256524
    966210 9es6:F (3.0) BS01 ADP N/A GO:0001530 ... P10809 41256524
    966211 9es6:F (3.0) BS02 BEF N/A GO:0001530 ... P10809 41256524
    966212 9es6:G (3.0) BS01 ADP N/A GO:0001530 ... P10809 41256524
    966213 9es6:G (3.0) BS02 BEF N/A GO:0001530 ... P10809 41256524
    966214 9es6:H (3.0) BS01 ADP N/A GO:0001530 ... P10809 41256524
    966215 9es6:H (3.0) BS02 BEF N/A GO:0001530 ... P10809 41256524
    966216 9es6:I (3.0) BS01 ADP N/A GO:0001530 ... P10809 41256524
    966217 9es6:I (3.0) BS02 BEF N/A GO:0001530 ... P10809 41256524
    966218 9es6:J (3.0) BS01 ADP N/A GO:0001530 ... P10809 41256524
    966219 9es6:J (3.0) BS02 BEF N/A GO:0001530 ... P10809 41256524
    966220 9es6:K (3.0) BS01 ADP N/A GO:0001530 ... P10809 41256524
    966221 9es6:K (3.0) BS02 BEF N/A GO:0001530 ... P10809 41256524
    966222 9es6:L (3.0) BS01 ADP N/A GO:0001530 ... P10809 41256524
    966223 9es6:L (3.0) BS02 BEF N/A GO:0001530 ... P10809 41256524
    966224 9es6:M (3.0) BS01 ADP N/A GO:0001530 ... P10809 41256524
    966225 9es6:M (3.0) BS02 BEF N/A GO:0001530 ... P10809 41256524
    966226 9es6:N (3.0) BS01 ADP N/A GO:0001530 ... P10809 41256524
    966227 9es6:N (3.0) BS02 BEF N/A GO:0001530 ... P10809 41256524
    966228 9es7:A (1.94) BS01 peptide N/A GO:0009055 ... P00165 39362993
    966229 9es7:A (1.94) BS02 HEM N/A GO:0009055 ... P00165 39362993
    966230 9es7:A (1.94) BS03 HEM N/A GO:0009055 ... P00165 39362993
    966231 9es7:A (1.94) BS04 HEC N/A GO:0009055 ... P00165 39362993
    966232 9es7:B (1.94) BS01 peptide N/A GO:0009055 ... P00166 39362993
    966233 9es7:B (1.94) BS02 CLA N/A GO:0009055 ... P00166 39362993
    966234 9es7:C (1.94) BS01 peptide N/A GO:0005506 ... P16013 39362993
    966235 9es7:C (1.94) BS02 HEC N/A GO:0005506 ... P16013 39362993
    966236 9es7:D (1.94) BS01 FES N/A GO:0005737 ... P08980 39362993
    966237 9es7:E (1.94) BS01 peptide N/A GO:0009055 ... Q9M3L0 39362993
    966238 9es7:F (1.94) BS01 peptide N/A GO:0009512 ... A0A9R0IV89 39362993
    966239 9es7:F (1.94) BS02 peptide N/A GO:0009512 ... A0A9R0IV89 39362993
    966240 9es7:G (1.94) BS01 peptide N/A GO:0009055 ... P69461 39362993
    966241 9es7:I (1.94) BS01 peptide N/A GO:0009055 ... P00165 39362993
    966242 9es7:I (1.94) BS02 peptide N/A GO:0009055 ... P00165 39362993
    966243 9es7:I (1.94) BS03 HEM N/A GO:0009055 ... P00165 39362993
    966244 9es7:I (1.94) BS04 HEM N/A GO:0009055 ... P00165 39362993
    966245 9es7:I (1.94) BS05 HEC N/A GO:0009055 ... P00165 39362993
    966246 9es7:J (1.94) BS01 peptide N/A GO:0009055 ... P00166 39362993
    966247 9es7:J (1.94) BS02 CLA N/A GO:0009055 ... P00166 39362993
    966248 9es7:K (1.94) BS01 peptide N/A GO:0005506 ... P16013 39362993
    966249 9es7:K (1.94) BS02 HEC N/A GO:0005506 ... P16013 39362993
    966250 9es7:L (1.94) BS01 FES N/A GO:0005737 ... P08980 39362993
    966251 9es7:M (1.94) BS01 peptide N/A GO:0009055 ... Q9M3L0 39362993
    966252 9es7:N (1.94) BS01 peptide N/A GO:0009512 ... A0A9R0IV89 39362993
    966253 9es7:N (1.94) BS02 peptide N/A GO:0009512 ... A0A9R0IV89 39362993
    966254 9es7:O (1.94) BS01 peptide N/A GO:0009055 ... P69461 39362993
    966255 9es8:A (2.24) BS01 peptide N/A GO:0009055 ... P00165 39362993
    966256 9es8:A (2.24) BS02 peptide N/A GO:0009055 ... P00165 39362993
    966257 9es8:A (2.24) BS03 HEM N/A GO:0009055 ... P00165 39362993
    966258 9es8:A (2.24) BS04 HEM N/A GO:0009055 ... P00165 39362993
    966259 9es8:A (2.24) BS05 HEC N/A GO:0009055 ... P00165 39362993
    966260 9es8:B (2.24) BS01 peptide N/A GO:0009055 ... P00166 39362993
    966261 9es8:B (2.24) BS02 CLA N/A GO:0009055 ... P00166 39362993
    966262 9es8:C (2.24) BS01 HEC N/A GO:0005506 ... P16013 39362993
    966263 9es8:D (2.24) BS01 FES N/A GO:0005737 ... P08980 39362993
    966264 9es8:E (2.24) BS01 peptide N/A GO:0009055 ... Q9M3L0 39362993
    966265 9es8:F (2.24) BS01 peptide N/A GO:0009512 ... A0A9R0IV89 39362993
    966266 9es8:G (2.24) BS01 peptide N/A GO:0009055 ... P69461 39362993
    966267 9es8:I (2.24) BS01 peptide N/A GO:0009055 ... P00165 39362993
    966268 9es8:I (2.24) BS02 peptide N/A GO:0009055 ... P00165 39362993
    966269 9es8:I (2.24) BS03 HEM N/A GO:0009055 ... P00165 39362993
    966270 9es8:I (2.24) BS04 HEM N/A GO:0009055 ... P00165 39362993
    966271 9es8:I (2.24) BS05 HEC N/A GO:0009055 ... P00165 39362993
    966272 9es8:J (2.24) BS01 peptide N/A GO:0009055 ... P00166 39362993
    966273 9es8:J (2.24) BS02 CLA N/A GO:0009055 ... P00166 39362993
    966274 9es8:K (2.24) BS01 HEC N/A GO:0005506 ... P16013 39362993
    966275 9es8:L (2.24) BS01 FES N/A GO:0005737 ... P08980 39362993
    966276 9es8:M (2.24) BS01 peptide N/A GO:0009055 ... Q9M3L0 39362993
    966277 9es8:N (2.24) BS01 peptide N/A GO:0009512 ... A0A9R0IV89 39362993
    966278 9es8:O (2.24) BS01 peptide N/A GO:0009055 ... P69461 39362993
    966279 9es9:A (2.33) BS01 peptide N/A GO:0009055 ... P00165 39362993
    966280 9es9:A (2.33) BS02 peptide N/A GO:0009055 ... P00165 39362993
    966281 9es9:A (2.33) BS03 HEM N/A GO:0009055 ... P00165 39362993
    966282 9es9:A (2.33) BS04 HEM N/A GO:0009055 ... P00165 39362993
    966283 9es9:A (2.33) BS05 HEC N/A GO:0009055 ... P00165 39362993
    966284 9es9:B (2.33) BS01 peptide N/A GO:0009055 ... P00166 39362993
    966285 9es9:B (2.33) BS02 BNT N/A GO:0009055 ... P00166 39362993
    966286 9es9:B (2.33) BS03 CLA N/A GO:0009055 ... P00166 39362993
    966287 9es9:C (2.33) BS01 HEC N/A GO:0005506 ... P16013 39362993
    966288 9es9:D (2.33) BS01 FES N/A GO:0005737 ... P08980 39362993
    966289 9es9:E (2.33) BS01 peptide N/A GO:0009055 ... Q9M3L0 39362993
    966290 9es9:F (2.33) BS01 peptide N/A GO:0009512 ... A0A9R0IV89 39362993
    966291 9es9:G (2.33) BS01 peptide N/A GO:0009055 ... P69461 39362993
    966292 9es9:I (2.33) BS01 peptide N/A GO:0009055 ... P00165 39362993
    966293 9es9:I (2.33) BS02 peptide N/A GO:0009055 ... P00165 39362993
    966294 9es9:I (2.33) BS03 HEM N/A GO:0009055 ... P00165 39362993
    966295 9es9:I (2.33) BS04 HEM N/A GO:0009055 ... P00165 39362993
    966296 9es9:I (2.33) BS05 HEC N/A GO:0009055 ... P00165 39362993
    966297 9es9:J (2.33) BS01 peptide N/A GO:0009055 ... P00166 39362993
    966298 9es9:J (2.33) BS02 BNT N/A GO:0009055 ... P00166 39362993
    966299 9es9:J (2.33) BS03 CLA N/A GO:0009055 ... P00166 39362993
    966300 9es9:K (2.33) BS01 HEC N/A GO:0005506 ... P16013 39362993
    966301 9es9:L (2.33) BS01 FES N/A GO:0005737 ... P08980 39362993
    966302 9es9:M (2.33) BS01 peptide N/A GO:0009055 ... Q9M3L0 39362993
    966303 9es9:O (2.33) BS01 peptide N/A GO:0009055 ... P69461 39362993
    966304 9esb:A (2.249) BS01 HEM N/A GO:0004833 ... P14902 N/A
    966305 9esb:A (2.249) BS02 A1H6T N/A GO:0004833 ... P14902 N/A
    966306 9esb:B (2.249) BS01 HEM N/A GO:0004833 ... P14902 N/A
    966307 9esb:B (2.249) BS02 A1H6T N/A GO:0004833 ... P14902 N/A
    966308 9esc:A (1.95) BS01 HEM N/A GO:0004833 ... P14902 N/A
    966309 9esc:A (1.95) BS02 A1H6R N/A GO:0004833 ... P14902 N/A
    966310 9esc:B (1.95) BS01 HEM N/A GO:0004833 ... P14902 N/A
    966311 9esc:B (1.95) BS02 A1H6R N/A GO:0004833 ... P14902 N/A
    966312 9esd:A (2.103) BS01 HEM N/A GO:0004833 ... P20351 N/A
    966313 9esd:A (2.103) BS02 5PK N/A GO:0004833 ... P20351 N/A
    966314 9esd:A (2.103) BS03 5PK N/A GO:0004833 ... P20351 N/A
    966315 9esd:B (2.103) BS01 HEM N/A GO:0004833 ... P20351 N/A
    966316 9esd:B (2.103) BS02 5PK N/A GO:0004833 ... P20351 N/A
    966317 9esd:C (2.103) BS01 HEM N/A GO:0004833 ... P20351 N/A
    966318 9esd:C (2.103) BS02 5PK N/A GO:0004833 ... P20351 N/A
    966319 9esd:D (2.103) BS01 5PK N/A GO:0004833 ... P20351 N/A
    966320 9esd:D (2.103) BS02 HEM N/A GO:0004833 ... P20351 N/A
    966321 9esd:D (2.103) BS03 5PK N/A GO:0004833 ... P20351 N/A
    966322 9ese:A (2.539) BS01 HEM N/A GO:0004833 ... P14902 N/A
    966323 9ese:A (2.539) BS02 A1H6V N/A GO:0004833 ... P14902 N/A
    966324 9ese:B (2.539) BS01 HEM N/A GO:0004833 ... P14902 N/A
    966325 9ese:B (2.539) BS02 A1H6V N/A GO:0004833 ... P14902 N/A
    966326 9esf:A (2.501) BS01 HEM N/A GO:0004833 ... P20351 N/A
    966327 9esf:A (2.501) BS02 A1H6U N/A GO:0004833 ... P20351 N/A
    966328 9esf:B (2.501) BS01 HEM N/A GO:0004833 ... P20351 N/A
    966329 9esf:B (2.501) BS02 A1H6U N/A GO:0004833 ... P20351 N/A
    966330 9esf:C (2.501) BS01 HEM N/A GO:0004833 ... P20351 N/A
    966331 9esf:C (2.501) BS02 A1H6U N/A GO:0004833 ... P20351 N/A
    966332 9esf:D (2.501) BS01 HEM N/A GO:0004833 ... P20351 N/A
    966333 9esf:D (2.501) BS02 A1H6U N/A GO:0004833 ... P20351 N/A
    966334 9esg:A (2.497) BS01 HEM N/A GO:0004833 ... P14902 N/A
    966335 9esg:A (2.497) BS02 A1H60 N/A GO:0004833 ... P14902 N/A
    966336 9esg:B (2.497) BS01 HEM N/A GO:0004833 ... P14902 N/A
    966337 9esg:B (2.497) BS02 A1H60 N/A GO:0004833 ... P14902 N/A
    966338 9esh:A (3.2) BS01 rna N/A GO:0000386 ... O14187 39833470
    966339 9esh:A (3.2) BS02 rna N/A GO:0000386 ... O14187 39833470
    966340 9esh:A (3.2) BS03 rna N/A GO:0000386 ... O14187 39833470
    966341 9esh:A (3.2) BS04 rna N/A GO:0000386 ... O14187 39833470
    966342 9esh:A (3.2) BS05 IHP N/A GO:0000386 ... O14187 39833470
    966343 9esh:B (3.2) BS01 rna N/A GO:0000244 ... O94316 39833470
    966344 9esh:B (3.2) BS02 GTP N/A GO:0000244 ... O94316 39833470
    966345 9esh:B (3.2) BS03 MG N/A GO:0000244 ... O94316 39833470
    966346 9esh:D (3.2) BS01 rna N/A GO:0000243 ... Q9UUC6 39833470
    966347 9esh:E (3.2) BS01 rna N/A GO:0000395 ... Q10163 39833470
    966348 9esh:F (3.2) BS01 rna N/A GO:0000243 ... O42661 39833470
    966349 9esh:G (3.2) BS01 rna N/A GO:0000387 ... O14036 39833470
    966350 9esh:H (3.2) BS01 rna N/A GO:0000387 ... Q9USZ3 39833470
    966351 9esh:I (3.2) BS01 rna N/A GO:0000395 ... O59734 39833470
    966352 9esh:J (3.2) BS01 rna N/A GO:0000395 ... O74966 39833470
    966353 9esh:L (3.2) BS01 rna N/A GO:0000398 ... Q09882 39833470
    966354 9esh:L (3.2) BS02 rna N/A GO:0000398 ... Q09882 39833470
    966355 9esh:M (3.2) BS01 rna N/A GO:0000974 ... O59800 39833470
    966356 9esh:M (3.2) BS02 ZN N/A GO:0000974 ... O59800 39833470
    966357 9esh:M (3.2) BS03 ZN N/A GO:0000974 ... O59800 39833470
    966358 9esh:O (3.2) BS01 rna N/A GO:0000398 ... O74772 39833470
    966359 9esh:O (3.2) BS02 rna N/A GO:0000398 ... O74772 39833470
    966360 9esh:O (3.2) BS03 ZN N/A GO:0000398 ... O74772 39833470
    966361 9esh:O (3.2) BS04 ZN N/A GO:0000398 ... O74772 39833470
    966362 9esh:O (3.2) BS05 ZN N/A GO:0000398 ... O74772 39833470
    966363 9esh:P (3.2) BS01 rna N/A GO:0000387 ... P87126 39833470
    966364 9esh:P (3.2) BS02 rna N/A GO:0000387 ... P87126 39833470
    966365 9esh:P (3.2) BS03 ZN N/A GO:0000387 ... P87126 39833470
    966366 9esh:Q (3.2) BS01 rna N/A GO:0000398 ... P78794 39833470
    966367 9esh:R (3.2) BS01 rna N/A GO:0000245 ... P87312 39833470
    966368 9esh:W (3.2) BS01 rna N/A GO:0000398 ... P39964 39833470
    966369 9esh:W (3.2) BS02 rna N/A GO:0000398 ... P39964 39833470
    966370 9esh:Y (3.2) BS01 rna N/A GO:0000974 ... O59733 39833470
    966371 9esh:a (3.2) BS01 rna N/A GO:0000398 ... O43071 39833470
    966372 9esh:b (3.2) BS01 rna N/A GO:0000974 ... O14161 39833470
    966373 9esh:b (3.2) BS02 rna N/A GO:0000974 ... O14161 39833470
    966374 9esh:y (3.2) BS01 rna N/A GO:0003723 ... Q9HE07 39833470
    966375 9esh:y (3.2) BS02 rna N/A GO:0003723 ... Q9HE07 39833470
    966376 9esh:z (3.2) BS01 peptide N/A GO:0000398 ... Q9HE06 39833470
    966377 9esi:A (3.1) BS01 rna N/A GO:0000386 ... O14187 39833470
    966378 9esi:A (3.1) BS02 rna N/A GO:0000386 ... O14187 39833470
    966379 9esi:A (3.1) BS03 rna N/A GO:0000386 ... O14187 39833470
    966380 9esi:A (3.1) BS04 rna N/A GO:0000386 ... O14187 39833470
    966381 9esi:A (3.1) BS05 IHP N/A GO:0000386 ... O14187 39833470
    966382 9esi:B (3.1) BS01 rna N/A GO:0000244 ... O94316 39833470
    966383 9esi:B (3.1) BS02 GTP N/A GO:0000244 ... O94316 39833470
    966384 9esi:B (3.1) BS03 MG N/A GO:0000244 ... O94316 39833470
    966385 9esi:D (3.1) BS01 rna N/A GO:0000243 ... Q9UUC6 39833470
    966386 9esi:E (3.1) BS01 rna N/A GO:0000395 ... Q10163 39833470
    966387 9esi:F (3.1) BS01 rna N/A GO:0000243 ... O42661 39833470
    966388 9esi:G (3.1) BS01 rna N/A GO:0000387 ... O14036 39833470
    966389 9esi:H (3.1) BS01 rna N/A GO:0000387 ... Q9USZ3 39833470
    966390 9esi:I (3.1) BS01 rna N/A GO:0000395 ... O59734 39833470
    966391 9esi:J (3.1) BS01 rna N/A GO:0000395 ... O74966 39833470
    966392 9esi:L (3.1) BS01 rna N/A GO:0000398 ... Q09882 39833470
    966393 9esi:L (3.1) BS02 rna N/A GO:0000398 ... Q09882 39833470
    966394 9esi:M (3.1) BS01 rna N/A GO:0000974 ... O59800 39833470
    966395 9esi:M (3.1) BS02 ZN N/A GO:0000974 ... O59800 39833470
    966396 9esi:M (3.1) BS03 ZN N/A GO:0000974 ... O59800 39833470
    966397 9esi:O (3.1) BS01 rna N/A GO:0000398 ... O74772 39833470
    966398 9esi:O (3.1) BS02 rna N/A GO:0000398 ... O74772 39833470
    966399 9esi:O (3.1) BS03 ZN N/A GO:0000398 ... O74772 39833470
    966400 9esi:O (3.1) BS04 ZN N/A GO:0000398 ... O74772 39833470

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).