SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    966401 9esi:O (3.1) BS05 ZN N/A GO:0000398 ... O74772 39833470
    966402 9esi:P (3.1) BS01 rna N/A GO:0000387 ... P87126 39833470
    966403 9esi:P (3.1) BS02 rna N/A GO:0000387 ... P87126 39833470
    966404 9esi:P (3.1) BS03 ZN N/A GO:0000387 ... P87126 39833470
    966405 9esi:Q (3.1) BS01 rna N/A GO:0000398 ... P78794 39833470
    966406 9esi:R (3.1) BS01 rna N/A GO:0000245 ... P87312 39833470
    966407 9esi:W (3.1) BS01 rna N/A GO:0000398 ... P39964 39833470
    966408 9esi:W (3.1) BS02 rna N/A GO:0000398 ... P39964 39833470
    966409 9esi:Y (3.1) BS01 rna N/A GO:0000974 ... O59733 39833470
    966410 9esi:a (3.1) BS01 rna N/A GO:0000398 ... O43071 39833470
    966411 9esi:b (3.1) BS01 rna N/A GO:0000974 ... O14161 39833470
    966412 9esi:y (3.1) BS01 rna N/A GO:0003723 ... Q9HE07 39833470
    966413 9esi:y (3.1) BS02 rna N/A GO:0003723 ... Q9HE07 39833470
    966414 9esi:z (3.1) BS01 peptide N/A GO:0000398 ... Q9HE06 39833470
    966415 9esj:A (2.37) BS01 HHT N/A GO:0000082 ... P24941 40816275
    966416 9esj:A (2.37) BS02 HHT N/A GO:0000082 ... P24941 40816275
    966417 9esj:A (2.37) BS03 HHT N/A GO:0000082 ... P24941 40816275
    966418 9esj:A (2.37) BS04 HHT N/A GO:0000082 ... P24941 40816275
    966419 9esj:B (2.37) BS01 HHT N/A GO:0016538 ... P30274 40816275
    966420 9esj:B (2.37) BS02 HHT N/A GO:0016538 ... P30274 40816275
    966421 9esj:B (2.37) BS03 HHT N/A GO:0016538 ... P30274 40816275
    966422 9esj:C (2.37) BS01 HHT N/A GO:0000082 ... P24941 40816275
    966423 9esj:C (2.37) BS02 HHT N/A GO:0000082 ... P24941 40816275
    966424 9esj:C (2.37) BS03 HHT N/A GO:0000082 ... P24941 40816275
    966425 9esj:D (2.37) BS01 HHT N/A GO:0016538 ... P30274 40816275
    966426 9esk:A (2.398) BS01 W3D N/A GO:0000082 ... P24941 40816275
    966427 9esk:A (2.398) BS02 W3D N/A GO:0000082 ... P24941 40816275
    966428 9esk:A (2.398) BS03 W3D N/A GO:0000082 ... P24941 40816275
    966429 9esk:B (2.398) BS01 W3D N/A GO:0016538 ... P30274 40816275
    966430 9esk:B (2.398) BS02 W3D N/A GO:0016538 ... P30274 40816275
    966431 9esk:C (2.398) BS01 W3D N/A GO:0000082 ... P24941 40816275
    966432 9esk:C (2.398) BS02 W3D N/A GO:0000082 ... P24941 40816275
    966433 9esk:D (2.398) BS01 W3D N/A GO:0016538 ... P30274 40816275
    966434 9esl:A (2.392) BS01 V3U N/A GO:0000082 ... P24941 40816275
    966435 9esl:A (2.392) BS02 V3U N/A GO:0000082 ... P24941 40816275
    966436 9esl:A (2.392) BS03 V3U N/A GO:0000082 ... P24941 40816275
    966437 9esl:C (2.392) BS01 V3U N/A GO:0000082 ... P24941 40816275
    966438 9esl:C (2.392) BS02 V3U N/A GO:0000082 ... P24941 40816275
    966439 9esl:D (2.392) BS01 V3U N/A GO:0016538 ... P30274 40816275
    966440 9esm:A (3.06) BS01 BGC N/A GO:0005198 ... P61116 38992036
    966441 9esm:A (3.06) BS02 BGC N/A GO:0005198 ... P61116 38992036
    966442 9esm:B (3.06) BS01 BGC N/A GO:0005198 ... P61116 38992036
    966443 9esm:C (3.06) BS01 BGC N/A GO:0005198 ... P61116 38992036
    966444 9esm:D (3.06) BS01 BGC N/A GO:0005198 ... P61116 38992036
    966445 9esm:E (3.06) BS01 BGC N/A GO:0005198 ... P61116 38992036
    966446 9esm:E (3.06) BS02 BGC N/A GO:0005198 ... P61116 38992036
    966447 9esm:F (3.06) BS01 BGC N/A GO:0005198 ... P61116 38992036
    966448 9esm:G (3.06) BS01 BGC N/A GO:0005198 ... P61116 38992036
    966449 9esm:G (3.06) BS02 BDP N/A GO:0005198 ... P61116 38992036
    966450 9esm:G (3.06) BS03 BGC N/A GO:0005198 ... P61116 38992036
    966451 9esm:H (3.06) BS01 BGC N/A GO:0005198 ... P61116 38992036
    966452 9esm:H (3.06) BS02 BGC N/A GO:0005198 ... P61116 38992036
    966453 9esm:I (3.06) BS01 BGC N/A GO:0005198 ... P61116 38992036
    966454 9esm:I (3.06) BS02 BGC N/A GO:0005198 ... P61116 38992036
    966455 9esm:J (3.06) BS01 BGC N/A GO:0005198 ... P61116 38992036
    966456 9esm:J (3.06) BS02 BGC N/A GO:0005198 ... P61116 38992036
    966457 9esm:K (3.06) BS01 BDP N/A GO:0005198 ... P61116 38992036
    966458 9esm:K (3.06) BS02 BGC N/A GO:0005198 ... P61116 38992036
    966459 9esm:K (3.06) BS03 BGC N/A GO:0005198 ... P61116 38992036
    966460 9esm:L (3.06) BS01 BGC N/A GO:0005198 ... P61116 38992036
    966461 9esm:L (3.06) BS02 BGC N/A GO:0005198 ... P61116 38992036
    966462 9esm:L (3.06) BS03 BDP N/A GO:0005198 ... P61116 38992036
    966463 9esm:M (3.06) BS01 BGC N/A GO:0005198 ... P61116 38992036
    966464 9esm:N (3.06) BS01 BDP N/A GO:0005198 ... P61116 38992036
    966465 9esm:N (3.06) BS02 BGC N/A GO:0005198 ... P61116 38992036
    966466 9esm:N (3.06) BS03 BGC N/A GO:0005198 ... P61116 38992036
    966467 9esm:O (3.06) BS01 BGC N/A GO:0005198 ... P61116 38992036
    966468 9esm:O (3.06) BS02 BGC N/A GO:0005198 ... P61116 38992036
    966469 9esm:P (3.06) BS01 BGC N/A GO:0005198 ... P61116 38992036
    966470 9esm:P (3.06) BS02 BGC N/A GO:0005198 ... P61116 38992036
    966471 9esm:Q (3.06) BS01 BDP N/A GO:0005198 ... P61116 38992036
    966472 9esm:Q (3.06) BS02 BGC N/A GO:0005198 ... P61116 38992036
    966473 9esm:Q (3.06) BS03 BGC N/A GO:0005198 ... P61116 38992036
    966474 9esm:R (3.06) BS01 BGC N/A GO:0005198 ... P61116 38992036
    966475 9esm:R (3.06) BS02 BGC N/A GO:0005198 ... P61116 38992036
    966476 9esm:S (3.06) BS01 BGC N/A GO:0005198 ... P61116 38992036
    966477 9esm:S (3.06) BS02 BGC N/A GO:0005198 ... P61116 38992036
    966478 9esm:T (3.06) BS01 BGC N/A GO:0005198 ... P61116 38992036
    966479 9esm:U (3.06) BS01 BGC N/A GO:0005198 ... P61116 38992036
    966480 9esm:U (3.06) BS02 BGC N/A GO:0005198 ... P61116 38992036
    966481 9esm:V (3.06) BS01 BGC N/A GO:0005198 ... P61116 38992036
    966482 9esm:V (3.06) BS02 BGC N/A GO:0005198 ... P61116 38992036
    966483 9esm:W (3.06) BS01 BGC N/A GO:0005198 ... P61116 38992036
    966484 9esm:W (3.06) BS02 BGC N/A GO:0005198 ... P61116 38992036
    966485 9esm:X (3.06) BS01 BDP N/A GO:0005198 ... P61116 38992036
    966486 9esm:X (3.06) BS02 BGC N/A GO:0005198 ... P61116 38992036
    966487 9esm:X (3.06) BS03 BGC N/A GO:0005198 ... P61116 38992036
    966488 9esm:Y (3.06) BS01 BGC N/A GO:0005198 ... P61116 38992036
    966489 9esm:Y (3.06) BS02 BGC N/A GO:0005198 ... P61116 38992036
    966490 9esn:A (2.393) BS01 UUS N/A GO:0000082 ... P24941 40816275
    966491 9esn:B (2.393) BS01 UUS N/A GO:0016538 ... P30274 40816275
    966492 9esn:C (2.393) BS01 UUS N/A GO:0000082 ... P24941 40816275
    966493 9esn:C (2.393) BS02 UUS N/A GO:0000082 ... P24941 40816275
    966494 9esn:D (2.393) BS01 UUS N/A GO:0016538 ... P30274 40816275
    966495 9eso:A (2.396) BS01 W3A N/A GO:0000082 ... P24941 40816275
    966496 9eso:B (2.396) BS01 W3A N/A GO:0016538 ... P30274 40816275
    966497 9eso:B (2.396) BS02 W3A N/A GO:0016538 ... P30274 40816275
    966498 9eso:C (2.396) BS01 W3A N/A GO:0000082 ... P24941 40816275
    966499 9eso:C (2.396) BS02 W3A N/A GO:0000082 ... P24941 40816275
    966500 9eso:C (2.396) BS03 W3A N/A GO:0000082 ... P24941 40816275
    966501 9eso:D (2.396) BS01 W3A N/A GO:0016538 ... P30274 40816275
    966502 9esp:A (2.381) BS01 UUV N/A GO:0000082 ... P24941 40816275
    966503 9esp:B (2.381) BS01 UUV N/A GO:0016538 ... P30274 40816275
    966504 9esp:C (2.381) BS01 UUV N/A GO:0000082 ... P24941 40816275
    966505 9esq:A (2.38) BS01 IT4 N/A GO:0000082 ... P24941 40816275
    966506 9esq:A (2.38) BS02 IT4 N/A GO:0000082 ... P24941 40816275
    966507 9esq:A (2.38) BS03 IT4 N/A GO:0000082 ... P24941 40816275
    966508 9esq:A (2.38) BS04 IT4 N/A GO:0000082 ... P24941 40816275
    966509 9esq:B (2.38) BS01 IT4 N/A GO:0016538 ... P30274 40816275
    966510 9esq:B (2.38) BS02 IT4 N/A GO:0016538 ... P30274 40816275
    966511 9esq:B (2.38) BS03 IT4 N/A GO:0016538 ... P30274 40816275
    966512 9esq:C (2.38) BS01 IT4 N/A GO:0000082 ... P24941 40816275
    966513 9esq:C (2.38) BS02 IT4 N/A GO:0000082 ... P24941 40816275
    966514 9esq:C (2.38) BS03 IT4 N/A GO:0000082 ... P24941 40816275
    966515 9esq:D (2.38) BS01 IT4 N/A GO:0016538 ... P30274 40816275
    966516 9esr:A (2.388) BS01 UU1 N/A GO:0000082 ... P24941 40816275
    966517 9esr:A (2.388) BS02 UU1 N/A GO:0000082 ... P24941 40816275
    966518 9esr:A (2.388) BS03 UU1 N/A GO:0000082 ... P24941 40816275
    966519 9esr:A (2.388) BS04 UU1 N/A GO:0000082 ... P24941 40816275
    966520 9esr:B (2.388) BS01 UU1 N/A GO:0016538 ... P30274 40816275
    966521 9esr:B (2.388) BS02 UU1 N/A GO:0016538 ... P30274 40816275
    966522 9esr:B (2.388) BS03 UU1 N/A GO:0016538 ... P30274 40816275
    966523 9esr:C (2.388) BS01 UU1 N/A GO:0000082 ... P24941 40816275
    966524 9esr:C (2.388) BS02 UU1 N/A GO:0000082 ... P24941 40816275
    966525 9esr:D (2.388) BS01 UU1 N/A GO:0016538 ... P30274 40816275
    966526 9esr:D (2.388) BS02 UU1 N/A GO:0016538 ... P30274 40816275
    966527 9ess:A (2.44) BS01 UUG N/A GO:0000082 ... P24941 40816275
    966528 9ess:A (2.44) BS02 UUG N/A GO:0000082 ... P24941 40816275
    966529 9ess:A (2.44) BS03 UUG N/A GO:0000082 ... P24941 40816275
    966530 9ess:A (2.44) BS04 UUG N/A GO:0000082 ... P24941 40816275
    966531 9ess:B (2.44) BS01 UUG N/A GO:0016538 ... P30274 40816275
    966532 9ess:C (2.44) BS01 UUG N/A GO:0000082 ... P24941 40816275
    966533 9ess:C (2.44) BS02 UUG N/A GO:0000082 ... P24941 40816275
    966534 9ess:D (2.44) BS01 UUG N/A GO:0016538 ... P30274 40816275
    966535 9ess:D (2.44) BS02 UUG N/A GO:0016538 ... P30274 40816275
    966536 9est:A (1.9) BS01 CA 3.4.21.36 GO:0004252 ... P00772 1998677
    966537 9est:A (1.9) BS02 IBR 3.4.21.36 GO:0004252 ... P00772 1998677
    966538 9esu:A (2.396) BS01 IJU N/A GO:0000082 ... P24941 40816275
    966539 9esu:C (2.396) BS01 IJU N/A GO:0000082 ... P24941 40816275
    966540 9esv:A (2.397) BS01 3Z7 N/A GO:0000082 ... P24941 40816275
    966541 9esv:A (2.397) BS02 3Z7 N/A GO:0000082 ... P24941 40816275
    966542 9esv:A (2.397) BS03 3Z7 N/A GO:0000082 ... P24941 40816275
    966543 9esv:A (2.397) BS04 3Z7 N/A GO:0000082 ... P24941 40816275
    966544 9esv:B (2.397) BS01 3Z7 N/A GO:0016538 ... P30274 40816275
    966545 9esv:C (2.397) BS01 3Z7 N/A GO:0000082 ... P24941 40816275
    966546 9esv:C (2.397) BS02 3Z7 N/A GO:0000082 ... P24941 40816275
    966547 9esv:D (2.397) BS01 3Z7 N/A GO:0016538 ... P30274 40816275
    966548 9esw:A (2.38) BS01 IJF N/A GO:0000082 ... P24941 40816275
    966549 9esw:A (2.38) BS02 IJF N/A GO:0000082 ... P24941 40816275
    966550 9esw:A (2.38) BS03 IJF N/A GO:0000082 ... P24941 40816275
    966551 9esw:B (2.38) BS01 IJF N/A GO:0016538 ... P30274 40816275
    966552 9esw:B (2.38) BS02 IJF N/A GO:0016538 ... P30274 40816275
    966553 9esw:C (2.38) BS01 IJF N/A GO:0000082 ... P24941 40816275
    966554 9esw:C (2.38) BS02 IJF N/A GO:0000082 ... P24941 40816275
    966555 9esw:C (2.38) BS03 IJF N/A GO:0000082 ... P24941 40816275
    966556 9esw:D (2.38) BS01 IJF N/A GO:0016538 ... P30274 40816275
    966557 9esw:D (2.38) BS02 IJF N/A GO:0016538 ... P30274 40816275
    966558 9esx:A (2.37) BS01 A1H6Y N/A GO:0000082 ... P24941 40816275
    966559 9esx:A (2.37) BS02 A1H6Y N/A GO:0000082 ... P24941 40816275
    966560 9esx:B (2.37) BS01 A1H6Y N/A GO:0016538 ... P30274 40816275
    966561 9esx:C (2.37) BS01 A1H6Y N/A GO:0000082 ... P24941 40816275
    966562 9esy:A (2.394) BS01 HH8 N/A GO:0000082 ... P24941 40816275
    966563 9esy:A (2.394) BS02 HH8 N/A GO:0000082 ... P24941 40816275
    966564 9esy:B (2.394) BS01 HH8 N/A GO:0016538 ... P30274 40816275
    966565 9esy:C (2.394) BS01 HH8 N/A GO:0000082 ... P24941 40816275
    966566 9esz:A (2.42) BS01 HGW N/A GO:0000082 ... P24941 40816275
    966567 9esz:C (2.42) BS01 HGW N/A GO:0000082 ... P24941 40816275
    966568 9et0:A (2.239) BS01 HHN N/A GO:0000082 ... P24941 40816275
    966569 9et0:C (2.239) BS01 HHN N/A GO:0000082 ... P24941 40816275
    966570 9et1:A (2.394) BS01 IJL N/A GO:0000082 ... P24941 40816275
    966571 9et1:A (2.394) BS02 IJL N/A GO:0000082 ... P24941 40816275
    966572 9et1:C (2.394) BS01 IJL N/A GO:0000082 ... P24941 40816275
    966573 9et2:A (2.37) BS01 IJX N/A GO:0000082 ... P24941 40816275
    966574 9et2:A (2.37) BS02 IJX N/A GO:0000082 ... P24941 40816275
    966575 9et2:C (2.37) BS01 IJX N/A GO:0000082 ... P24941 40816275
    966576 9et3:A (2.34) BS01 1P8 N/A GO:0000082 ... P24941 40816275
    966577 9et3:A (2.34) BS02 1P8 N/A GO:0000082 ... P24941 40816275
    966578 9et3:A (2.34) BS03 1P8 N/A GO:0000082 ... P24941 40816275
    966579 9et3:A (2.34) BS04 1P8 N/A GO:0000082 ... P24941 40816275
    966580 9et3:B (2.34) BS01 1P8 N/A GO:0016538 ... P30274 40816275
    966581 9et3:B (2.34) BS02 1P8 N/A GO:0016538 ... P30274 40816275
    966582 9et3:C (2.34) BS01 1P8 N/A GO:0000082 ... P24941 40816275
    966583 9et3:C (2.34) BS02 1P8 N/A GO:0000082 ... P24941 40816275
    966584 9et3:D (2.34) BS01 1P8 N/A GO:0016538 ... P30274 40816275
    966585 9et3:D (2.34) BS02 1P8 N/A GO:0016538 ... P30274 40816275
    966586 9et4:A (2.641) BS01 A1H6X N/A GO:0000082 ... P24941 40816275
    966587 9et4:A (2.641) BS02 A1H6X N/A GO:0000082 ... P24941 40816275
    966588 9et4:B (2.641) BS01 A1H6X N/A GO:0016538 ... P30274 40816275
    966589 9et4:C (2.641) BS01 A1H6X N/A GO:0000082 ... P24941 40816275
    966590 9et4:C (2.641) BS02 A1H6X N/A GO:0000082 ... P24941 40816275
    966591 9et4:D (2.641) BS01 A1H6X N/A GO:0016538 ... P30274 40816275
    966592 9et5:A (2.53) BS01 T5G N/A GO:0000082 ... P24941 40816275
    966593 9et5:A (2.53) BS02 T5G N/A GO:0000082 ... P24941 40816275
    966594 9et5:A (2.53) BS03 T5G N/A GO:0000082 ... P24941 40816275
    966595 9et5:B (2.53) BS01 T5G N/A GO:0016538 ... P30274 40816275
    966596 9et5:B (2.53) BS02 T5G N/A GO:0016538 ... P30274 40816275
    966597 9et5:C (2.53) BS01 T5G N/A GO:0000082 ... P24941 40816275
    966598 9et5:C (2.53) BS02 T5G N/A GO:0000082 ... P24941 40816275
    966599 9et5:D (2.53) BS01 T5G N/A GO:0016538 ... P30274 40816275
    966600 9et6:A (2.553) BS01 HHQ N/A GO:0000082 ... P24941 40816275

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).