SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    966801 9eu0:B (1.86) BS01 ZN N/A N/A F8W4B7 38892072
    966802 9eu0:B (1.86) BS02 A1H7I N/A N/A F8W4B7 38892072
    966803 9eu2:A (1.84) BS01 ZN N/A GO:0004560 ... G8UMQ6 39658312
    966804 9eu2:C (1.84) BS01 ZN N/A GO:0004560 ... G8UMQ6 39658312
    966805 9eu2:D (1.84) BS01 ZN N/A GO:0004560 ... G8UMQ6 39658312
    966806 9eu3:A (2.28) BS01 FUL N/A GO:0004560 ... G8UMQ6 39658312
    966807 9eu3:A (2.28) BS02 ZN N/A GO:0004560 ... G8UMQ6 39658312
    966808 9eu3:B (2.28) BS01 FUL N/A GO:0004560 ... G8UMQ6 39658312
    966809 9eu3:C (2.28) BS01 FUL N/A GO:0004560 ... G8UMQ6 39658312
    966810 9eu3:C (2.28) BS02 ZN N/A GO:0004560 ... G8UMQ6 39658312
    966811 9eu3:D (2.28) BS01 FUL N/A GO:0004560 ... G8UMQ6 39658312
    966812 9eu4:A (2.33) BS01 FUL N/A GO:0004560 ... Q64QR8 39658312
    966813 9eu4:B (2.33) BS01 FUL N/A GO:0004560 ... Q64QR8 39658312
    966814 9eu5:A (3.0) BS01 5JK N/A GO:0003676 ... Q64610 39008358
    966815 9eu5:A (3.0) BS02 ZN N/A GO:0003676 ... Q64610 39008358
    966816 9eu5:A (3.0) BS03 ZN N/A GO:0003676 ... Q64610 39008358
    966817 9eu5:A (3.0) BS04 ZN N/A GO:0003676 ... Q64610 39008358
    966818 9eu5:A (3.0) BS05 CA N/A GO:0003676 ... Q64610 39008358
    966819 9eu6:A (1.54) BS01 A1H7U 5.2.1.8 GO:0003755 ... Q13451 38818693
    966820 9eu7:A (2.21) BS01 A1H7A 5.2.1.8 GO:0003755 ... Q13451 38818693
    966821 9eu7:B (2.21) BS01 A1H7A 5.2.1.8 GO:0003755 ... Q13451 38818693
    966822 9eu7:B (2.21) BS02 A1H7A 5.2.1.8 GO:0003755 ... Q13451 38818693
    966823 9eu8:A (2.3) BS01 A1H7B 5.2.1.8 GO:0003755 ... Q13451 38818693
    966824 9eu8:B (2.3) BS01 A1H7B 5.2.1.8 GO:0003755 ... Q13451 38818693
    966825 9eu9:A (1.8) BS01 A1H7C 5.2.1.8 GO:0003755 ... Q13451 38818693
    966826 9eu9:B (1.8) BS01 A1H7C 5.2.1.8 GO:0003755 ... Q13451 38818693
    966827 9eua:A (2.5) BS01 A1H7D 5.2.1.8 GO:0003755 ... Q13451 38818693
    966828 9eua:B (2.5) BS01 A1H7D 5.2.1.8 GO:0003755 ... Q13451 38818693
    966829 9eub:A (2.0) BS01 A1H7E 5.2.1.8 GO:0003755 ... Q13451 38818693
    966830 9eub:B (2.0) BS01 A1H7E 5.2.1.8 GO:0003755 ... Q13451 38818693
    966831 9euc:A (2.4) BS01 A1H7F 5.2.1.8 GO:0003755 ... Q13451 38818693
    966832 9euc:B (2.4) BS01 A1H7F 5.2.1.8 GO:0003755 ... Q13451 38818693
    966833 9eud:A (2.022) BS01 A1H7G 5.2.1.8 GO:0003755 ... Q13451 38818693
    966834 9eud:B (2.022) BS01 A1H7G 5.2.1.8 GO:0003755 ... Q13451 38818693
    966835 9eue:A (2.0) BS01 A1H68 5.2.1.8 GO:0003755 ... Q13451 38818693
    966836 9eue:B (2.0) BS01 A1H68 5.2.1.8 GO:0003755 ... Q13451 38818693
    966837 9eun:A (2.33) BS01 SAM 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0004483 ... P0DTD1 N/A
    966838 9eun:A (2.33) BS02 MGP 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0004483 ... P0DTD1 N/A
    966839 9eun:B (2.33) BS01 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0003723 ... P0DTD1 N/A
    966840 9eun:B (2.33) BS02 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0003723 ... P0DTD1 N/A
    966841 9euo:A (3.2) BS01 A1H8F N/A GO:0016020 ... Q7K4Y6 39010681
    966842 9euo:A (3.2) BS02 Y01 N/A GO:0016020 ... Q7K4Y6 39010681
    966843 9euo:A (3.2) BS03 CLR N/A GO:0016020 ... Q7K4Y6 39010681
    966844 9euo:A (3.2) BS04 NA N/A GO:0016020 ... Q7K4Y6 39010681
    966845 9euo:A (3.2) BS05 CL N/A GO:0016020 ... Q7K4Y6 39010681
    966846 9eup:A (3.0) BS01 Y01 N/A GO:0016020 ... Q7K4Y6 39010681
    966847 9eup:A (3.0) BS02 CLR N/A GO:0016020 ... Q7K4Y6 39010681
    966848 9eup:A (3.0) BS03 NA N/A GO:0016020 ... Q7K4Y6 39010681
    966849 9eup:A (3.0) BS04 NA N/A GO:0016020 ... Q7K4Y6 39010681
    966850 9eup:A (3.0) BS05 CL N/A GO:0016020 ... Q7K4Y6 39010681
    966851 9euq:A (2.98) BS01 MG N/A GO:0000166 ... Q8Y8Q5 39908574
    966852 9euq:A (2.98) BS02 BEF N/A GO:0000166 ... Q8Y8Q5 39908574
    966853 9eut:A (2.95) BS01 LBV N/A GO:0000155 ... Q9HWR3 39216473
    966854 9eut:B (2.95) BS01 LBV N/A GO:0000155 ... Q9HWR3 39216473
    966855 9euy:A (2.95) BS01 LBV N/A GO:0000155 ... Q9HWR3 39216473
    966856 9euy:B (2.95) BS01 LBV N/A GO:0000155 ... Q9HWR3 39216473
    966857 9ev3:A (1.219) BS01 FAD N/A GO:0000287 ... Q8NMG5 39080980
    966858 9ev3:A (1.219) BS02 TPP N/A GO:0000287 ... Q8NMG5 39080980
    966859 9ev3:A (1.219) BS03 MG N/A GO:0000287 ... Q8NMG5 39080980
    966860 9ev4:A (1.474) BS01 FAD N/A GO:0000287 ... Q8NMG5 39080980
    966861 9ev5:A (1.863) BS01 TPP N/A GO:0000287 ... Q8NMG5 39080980
    966862 9ev5:A (1.863) BS02 MG N/A GO:0000287 ... Q8NMG5 39080980
    966863 9ev5:A (1.863) BS03 FAD N/A GO:0000287 ... Q8NMG5 39080980
    966864 9ev5:A (1.863) BS04 TPP N/A GO:0000287 ... Q8NMG5 39080980
    966865 9ev5:B (1.863) BS01 TPP N/A GO:0000287 ... Q8NMG5 39080980
    966866 9ev5:B (1.863) BS02 TPP N/A GO:0000287 ... Q8NMG5 39080980
    966867 9ev5:B (1.863) BS03 MG N/A GO:0000287 ... Q8NMG5 39080980
    966868 9ev5:B (1.863) BS04 FAD N/A GO:0000287 ... Q8NMG5 39080980
    966869 9ev5:C (1.863) BS01 TPP N/A GO:0000287 ... Q8NMG5 39080980
    966870 9ev5:C (1.863) BS02 MG N/A GO:0000287 ... Q8NMG5 39080980
    966871 9ev5:C (1.863) BS03 FAD N/A GO:0000287 ... Q8NMG5 39080980
    966872 9ev5:C (1.863) BS04 TPP N/A GO:0000287 ... Q8NMG5 39080980
    966873 9ev5:D (1.863) BS01 TPP N/A GO:0000287 ... Q8NMG5 39080980
    966874 9ev5:D (1.863) BS02 TPP N/A GO:0000287 ... Q8NMG5 39080980
    966875 9ev5:D (1.863) BS03 MG N/A GO:0000287 ... Q8NMG5 39080980
    966876 9ev5:D (1.863) BS04 FAD N/A GO:0000287 ... Q8NMG5 39080980
    966877 9ev6:A (1.891) BS01 FAD N/A GO:0000287 ... Q8NMG5 39080980
    966878 9ev6:A (1.891) BS02 TPP N/A GO:0000287 ... Q8NMG5 39080980
    966879 9ev6:A (1.891) BS03 MG N/A GO:0000287 ... Q8NMG5 39080980
    966880 9ev6:A (1.891) BS04 TPP N/A GO:0000287 ... Q8NMG5 39080980
    966881 9ev6:B (1.891) BS01 TPP N/A GO:0000287 ... Q8NMG5 39080980
    966882 9ev6:B (1.891) BS02 FAD N/A GO:0000287 ... Q8NMG5 39080980
    966883 9ev6:B (1.891) BS03 TPP N/A GO:0000287 ... Q8NMG5 39080980
    966884 9ev6:B (1.891) BS04 MG N/A GO:0000287 ... Q8NMG5 39080980
    966885 9ev6:C (1.891) BS01 FAD N/A GO:0000287 ... Q8NMG5 39080980
    966886 9ev6:C (1.891) BS02 TPP N/A GO:0000287 ... Q8NMG5 39080980
    966887 9ev6:C (1.891) BS03 MG N/A GO:0000287 ... Q8NMG5 39080980
    966888 9ev6:C (1.891) BS04 TPP N/A GO:0000287 ... Q8NMG5 39080980
    966889 9ev6:D (1.891) BS01 TPP N/A GO:0000287 ... Q8NMG5 39080980
    966890 9ev6:D (1.891) BS02 FAD N/A GO:0000287 ... Q8NMG5 39080980
    966891 9ev6:D (1.891) BS03 TPP N/A GO:0000287 ... Q8NMG5 39080980
    966892 9ev6:D (1.891) BS04 MG N/A GO:0000287 ... Q8NMG5 39080980
    966893 9ev8:A (2.06) BS01 CA N/A GO:0004888 ... A0ACD6B9Z9 41328424
    966894 9ev8:A (2.06) BS02 CA N/A GO:0004888 ... A0ACD6B9Z9 41328424
    966895 9ev8:B (2.06) BS01 CA N/A GO:0004888 ... A0ACD6B9Z9 41328424
    966896 9ev8:B (2.06) BS02 CA N/A GO:0004888 ... A0ACD6B9Z9 41328424
    966897 9ev8:C (2.06) BS01 CA N/A GO:0004888 ... A0ACD6B9Z9 41328424
    966898 9ev8:C (2.06) BS02 CA N/A GO:0004888 ... A0ACD6B9Z9 41328424
    966899 9ev8:D (2.06) BS01 CA N/A GO:0004888 ... A0ACD6B9Z9 41328424
    966900 9ev8:D (2.06) BS02 CA N/A GO:0004888 ... A0ACD6B9Z9 41328424
    966901 9ev8:E (2.06) BS01 CA N/A GO:0004888 ... A0ACD6B9Z9 41328424
    966902 9ev8:E (2.06) BS02 CA N/A GO:0004888 ... A0ACD6B9Z9 41328424
    966903 9eva:A (2.34) BS01 CA N/A GO:0004888 ... A0ACD6B9Z9 41328424
    966904 9eva:A (2.34) BS02 CA N/A GO:0004888 ... A0ACD6B9Z9 41328424
    966905 9eva:B (2.34) BS01 CA N/A GO:0004888 ... A0ACD6B9Z9 41328424
    966906 9eva:B (2.34) BS02 CA N/A GO:0004888 ... A0ACD6B9Z9 41328424
    966907 9eva:C (2.34) BS01 CA N/A GO:0004888 ... A0ACD6B9Z9 41328424
    966908 9eva:C (2.34) BS02 CA N/A GO:0004888 ... A0ACD6B9Z9 41328424
    966909 9eva:D (2.34) BS01 CA N/A GO:0004888 ... A0ACD6B9Z9 41328424
    966910 9eva:D (2.34) BS02 CA N/A GO:0004888 ... A0ACD6B9Z9 41328424
    966911 9eva:E (2.34) BS01 CA N/A GO:0004888 ... A0ACD6B9Z9 41328424
    966912 9eva:E (2.34) BS02 CA N/A GO:0004888 ... A0ACD6B9Z9 41328424
    966913 9evc:A (3.73) BS01 CA N/A GO:0000166 ... Q8Y8Q5 39908574
    966914 9evf:A (1.4) BS01 ADP N/A N/A A0A0P8H7C5 N/A
    966915 9evf:A (1.4) BS02 MG N/A N/A A0A0P8H7C5 N/A
    966916 9evf:A (1.4) BS03 MG N/A N/A A0A0P8H7C5 N/A
    966917 9evf:A (1.4) BS04 PYR N/A N/A A0A0P8H7C5 N/A
    966918 9evf:C (1.4) BS01 ADP N/A N/A A0A0P8H7C5 N/A
    966919 9evf:C (1.4) BS02 MG N/A N/A A0A0P8H7C5 N/A
    966920 9evf:C (1.4) BS03 MG N/A N/A A0A0P8H7C5 N/A
    966921 9evf:C (1.4) BS04 PYR N/A N/A A0A0P8H7C5 N/A
    966922 9evf:D (1.4) BS01 PYR N/A N/A A0A564JVI2 N/A
    966923 9evh:A (3.38) BS01 dna N/A GO:0000166 ... P03070 40108462
    966924 9evh:A (3.38) BS02 ADP N/A GO:0000166 ... P03070 40108462
    966925 9evh:B (3.38) BS01 dna N/A GO:0000166 ... P03070 40108462
    966926 9evh:B (3.38) BS02 ADP N/A GO:0000166 ... P03070 40108462
    966927 9evh:C (3.38) BS01 dna N/A GO:0000166 ... P03070 40108462
    966928 9evh:C (3.38) BS02 ADP N/A GO:0000166 ... P03070 40108462
    966929 9evh:D (3.38) BS01 dna N/A GO:0000166 ... P03070 40108462
    966930 9evh:D (3.38) BS02 ADP N/A GO:0000166 ... P03070 40108462
    966931 9evh:D (3.38) BS03 ADP N/A GO:0000166 ... P03070 40108462
    966932 9evh:E (3.38) BS01 dna N/A GO:0000166 ... P03070 40108462
    966933 9evh:E (3.38) BS02 ADP N/A GO:0000166 ... P03070 40108462
    966934 9evh:F (3.38) BS01 ADP N/A GO:0000166 ... P03070 40108462
    966935 9evj:A (2.7) BS01 GDU N/A GO:0005788 ... Q8NBJ5 40240392
    966936 9evj:A (2.7) BS02 UDP N/A GO:0005788 ... Q8NBJ5 40240392
    966937 9evj:B (2.7) BS01 GDU N/A GO:0005788 ... Q8NBJ5 40240392
    966938 9evk:A (3.0) BS01 GDU N/A GO:0005788 ... Q8NBJ5 40240392
    966939 9evk:B (3.0) BS01 GDU N/A GO:0005788 ... Q8NBJ5 40240392
    966940 9evl:A (2.8) BS01 GDU N/A GO:0005788 ... Q8NBJ5 40240392
    966941 9evl:B (2.8) BS01 GDU N/A GO:0005788 ... Q8NBJ5 40240392
    966942 9evm:A (1.8) BS01 FRU N/A GO:0005507 ... Q89EJ6 39002715
    966943 9evm:A (1.8) BS02 CU N/A GO:0005507 ... Q89EJ6 39002715
    966944 9evm:A (1.8) BS03 CU N/A GO:0005507 ... Q89EJ6 39002715
    966945 9evp:A (3.12) BS01 dna N/A GO:0003677 ... P03070 40108462
    966946 9evp:A (3.12) BS02 ANP N/A GO:0003677 ... P03070 40108462
    966947 9evp:B (3.12) BS01 dna N/A GO:0003677 ... P03070 40108462
    966948 9evp:B (3.12) BS02 ANP N/A GO:0003677 ... P03070 40108462
    966949 9evp:B (3.12) BS03 ANP N/A GO:0003677 ... P03070 40108462
    966950 9evp:C (3.12) BS01 dna N/A GO:0003677 ... P03070 40108462
    966951 9evp:C (3.12) BS02 ANP N/A GO:0003677 ... P03070 40108462
    966952 9evp:C (3.12) BS03 ANP N/A GO:0003677 ... P03070 40108462
    966953 9evp:D (3.12) BS01 dna N/A GO:0003677 ... P03070 40108462
    966954 9evp:D (3.12) BS02 ANP N/A GO:0003677 ... P03070 40108462
    966955 9evp:E (3.12) BS01 dna N/A GO:0003677 ... P03070 40108462
    966956 9evp:E (3.12) BS02 ANP N/A GO:0003677 ... P03070 40108462
    966957 9evp:F (3.12) BS01 dna N/A GO:0003677 ... P03070 40108462
    966958 9evp:F (3.12) BS02 ANP N/A GO:0003677 ... P03070 40108462
    966959 9evq:A (1.75) BS01 ACO N/A GO:0016747 ... Q38AU6 39579771
    966960 9evq:B (1.75) BS01 ACO N/A GO:0016747 ... Q38AU6 39579771
    966961 9evs:1B (3.05) BS01 rna N/A GO:0003723 ... A0A0D3B6N5 41330901
    966962 9evs:1C (3.05) BS01 rna N/A GO:0003723 ... A0A8E8L9Z5 41330901
    966963 9evs:1D (3.05) BS01 rna N/A GO:0003735 ... A0A0D3ACV4 41330901
    966964 9evs:1E (3.05) BS01 rna N/A GO:0003735 ... A0A0D2ZRI2 41330901
    966965 9evs:1F (3.05) BS01 rna N/A GO:0003735 ... A0A8E8LAA9 41330901
    966966 9evs:1G (3.05) BS01 rna N/A GO:0003735 ... A0A0D3D316 41330901
    966967 9evs:1H (3.05) BS01 rna N/A GO:0003735 ... A0A0D3EAI8 41330901
    966968 9evs:1I (3.05) BS01 rna N/A GO:0009507 ... A0A0D3AE97 41330901
    966969 9evs:1J (3.05) BS01 rna N/A GO:0003735 ... A0A0D3DHU3 41330901
    966970 9evs:1K (3.05) BS01 rna N/A GO:0003729 ... A0A0D3B978 41330901
    966971 9evs:1L (3.05) BS01 rna N/A GO:0003735 ... A0A0D3D9E7 41330901
    966972 9evs:1M (3.05) BS01 rna N/A GO:0003729 ... A0A0D3BF13 41330901
    966973 9evs:1N (3.05) BS01 rna N/A GO:0003735 ... G4XYG6 41330901
    966974 9evs:1N (3.05) BS02 rna N/A GO:0003735 ... G4XYG6 41330901
    966975 9evs:1O (3.05) BS01 rna N/A GO:0003735 ... A0A3P6DBK6 41330901
    966976 9evs:1P (3.05) BS01 rna N/A GO:0003735 ... A0A0D3DCH7 41330901
    966977 9evs:1P (3.05) BS02 rna N/A GO:0003735 ... A0A0D3DCH7 41330901
    966978 9evs:1Q (3.05) BS01 rna N/A GO:0003735 ... A0A0D3B0P2 41330901
    966979 9evs:1R (3.05) BS01 rna N/A GO:0003735 ... A0A3P6FUQ5 41330901
    966980 9evs:1S (3.05) BS01 rna N/A GO:0003723 ... A0A0D3BM42 41330901
    966981 9evs:1T (3.05) BS01 rna N/A GO:0003735 ... A0A0D3BFS0 41330901
    966982 9evs:1U (3.05) BS01 rna N/A GO:0003729 ... A0A3P6FL36 41330901
    966983 9evs:1V (3.05) BS01 rna N/A GO:0003723 ... A0A0D3E1K4 41330901
    966984 9evs:1W (3.05) BS01 rna N/A GO:0003729 ... A0A0D3D8C0 41330901
    966985 9evs:1X (3.05) BS01 rna N/A GO:0003735 ... A0A0D3BK40 41330901
    966986 9evs:1X (3.05) BS02 rna N/A GO:0003735 ... A0A0D3BK40 41330901
    966987 9evs:1Y (3.05) BS01 rna N/A GO:0003735 ... A0A0D3B184 41330901
    966988 9evs:1Z (3.05) BS01 rna N/A GO:0003735 ... A0A0D3A2V4 41330901
    966989 9evs:1a (3.05) BS01 rna N/A GO:0003735 ... A0A0D3C8D7 41330901
    966990 9evs:1b (3.05) BS01 rna N/A GO:0003735 ... A0A0D3EB87 41330901
    966991 9evs:1c (3.05) BS01 rna N/A N/A A0A3P6EA05 41330901
    966992 9evs:1c (3.05) BS02 rna N/A N/A A0A3P6EA05 41330901
    966993 9evs:1d (3.05) BS01 rna N/A GO:0003735 ... A0A0D3D6U6 41330901
    966994 9evs:1d (3.05) BS02 ZN N/A GO:0003735 ... A0A0D3D6U6 41330901
    966995 9evs:1e (3.05) BS01 rna N/A GO:0003735 ... A0A0D3B1V6 41330901
    966996 9evs:1f (3.05) BS01 rna N/A GO:0003735 ... A0A0D3CKG1 41330901
    966997 9evs:1g (3.05) BS01 rna N/A GO:0003735 ... A0A0D3AUD0 41330901
    966998 9evs:1h (3.05) BS01 rna N/A GO:0003735 ... A0A0D3B225 41330901
    966999 9evs:1h (3.05) BS02 ZN N/A GO:0003735 ... A0A0D3B225 41330901
    967000 9evs:1i (3.05) BS01 rna N/A GO:0005761 ... A0A3P6DV95 41330901

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).