SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    96601 2nz4:C (2.498) BS01 rna ? GO:0003676 ... P09012 17196404
    96602 2nz4:D (2.498) BS01 rna ? GO:0003676 ... P09012 17196404
    96603 2nz5:A (2.35) BS01 HEM 1.14.19.69 GO:0004497 ... Q9KZF5 17614370
    96604 2nz5:A (2.35) BS02 226 1.14.19.69 GO:0004497 ... Q9KZF5 17614370 MOAD: Kd=10.5uM
    96605 2nz5:A (2.35) BS03 226 1.14.19.69 GO:0004497 ... Q9KZF5 17614370 MOAD: Kd=10.5uM
    96606 2nz5:B (2.35) BS01 HEM 1.14.19.69 GO:0004497 ... Q9KZF5 17614370
    96607 2nz5:B (2.35) BS02 226 1.14.19.69 GO:0004497 ... Q9KZF5 17614370 MOAD: Kd=10.5uM
    96608 2nz5:B (2.35) BS03 226 1.14.19.69 GO:0004497 ... Q9KZF5 17614370 MOAD: Kd=10.5uM
    96609 2nz9:A (3.79) BS01 ZN 3.4.24.69 GO:0004222 ... P0DPI1 17173035
    96610 2nz9:A (3.79) BS02 CA 3.4.24.69 GO:0004222 ... P0DPI1 17173035
    96611 2nz9:B (3.79) BS01 ZN 3.4.24.69 GO:0004222 ... P0DPI1 17173035
    96612 2nza:A (2.9) BS01 HEM 1.14.19.69 GO:0004497 ... Q9KZF5 17614370
    96613 2nza:B (2.9) BS01 HEM 1.14.19.69 GO:0004497 ... Q9KZF5 17614370
    96614 2nzd:A (2.65) BS01 dna ? GO:0000786 ... P84233 17379244
    96615 2nzd:A (2.65) BS02 dna ? GO:0000786 ... P84233 17379244
    96616 2nzd:B (2.65) BS01 dna ? GO:0000786 ... P62799 17379244
    96617 2nzd:B (2.65) BS02 dna ? GO:0000786 ... P62799 17379244
    96618 2nzd:C (2.65) BS01 dna ? GO:0000786 ... P06897 17379244
    96619 2nzd:C (2.65) BS02 dna ? GO:0000786 ... P06897 17379244
    96620 2nzd:D (2.65) BS01 dna ? GO:0000786 ... P02281 17379244
    96621 2nzd:D (2.65) BS02 dna ? GO:0000786 ... P02281 17379244
    96622 2nzd:E (2.65) BS01 dna ? GO:0000786 ... P84233 17379244
    96623 2nzd:E (2.65) BS02 dna ? GO:0000786 ... P84233 17379244
    96624 2nzd:F (2.65) BS01 dna ? GO:0000786 ... P62799 17379244
    96625 2nzd:F (2.65) BS02 dna ? GO:0000786 ... P62799 17379244
    96626 2nzd:G (2.65) BS01 dna ? GO:0000786 ... P06897 17379244
    96627 2nzd:G (2.65) BS02 dna ? GO:0000786 ... P06897 17379244
    96628 2nzd:H (2.65) BS01 dna ? GO:0000786 ... P02281 17379244
    96629 2nzd:H (2.65) BS02 dna ? GO:0000786 ... P02281 17379244
    96630 2nze:A (1.8) BS01 ZN 3.5.2.6 GO:0008270 ... P04190 17915249
    96631 2nze:B (1.8) BS01 ZN 3.5.2.6 GO:0008270 ... P04190 17915249
    96632 2nzf:A (2.28) BS01 ZN 3.5.2.6 GO:0008270 ... P04190 17915249
    96633 2nzj:A (2.5) BS01 GDP ? GO:0003924 ... O75628 N/A
    96634 2nzj:B (2.5) BS01 GDP ? GO:0003924 ... O75628 N/A
    96635 2nzj:C (2.5) BS01 GDP ? GO:0003924 ... O75628 N/A
    96636 2nzj:D (2.5) BS01 GDP ? GO:0003924 ... O75628 N/A
    96637 2nzl:A (1.35) BS01 FMN 1.1.3.15
    1.2.3.5
    GO:0001561 ... Q9UJM8 N/A
    96638 2nzm:A (1.8) BS01 ADA 4.2.2.2 GO:0005576 ... P39116 20000851
    96639 2nzm:A (1.8) BS02 ADA 4.2.2.2 GO:0005576 ... P39116 20000851
    96640 2nzm:A (1.8) BS03 ADA 4.2.2.2 GO:0005576 ... P39116 20000851
    96641 2nzm:A (1.8) BS04 CA 4.2.2.2 GO:0005576 ... P39116 20000851
    96642 2nzm:A (1.8) BS05 CA 4.2.2.2 GO:0005576 ... P39116 20000851
    96643 2nzt:A (2.45) BS01 GLC 2.7.1.1 GO:0001678 ... P52789 29298880
    96644 2nzt:A (2.45) BS02 BG6 2.7.1.1 GO:0001678 ... P52789 29298880
    96645 2nzt:A (2.45) BS03 GLC 2.7.1.1 GO:0001678 ... P52789 29298880
    96646 2nzt:A (2.45) BS04 BG6 2.7.1.1 GO:0001678 ... P52789 29298880
    96647 2nzt:B (2.45) BS01 GLC 2.7.1.1 GO:0001678 ... P52789 29298880
    96648 2nzt:B (2.45) BS02 BG6 2.7.1.1 GO:0001678 ... P52789 29298880
    96649 2nzt:B (2.45) BS03 GLC 2.7.1.1 GO:0001678 ... P52789 29298880
    96650 2nzt:B (2.45) BS04 BG6 2.7.1.1 GO:0001678 ... P52789 29298880
    96651 2nzu:G (2.5) BS01 BG6 ? N/A P46828 17376479
    96652 2nzv:G (3.0) BS01 FBP ? N/A P46828 17376479
    96653 2nzx:A (1.9) BS01 GDP 2.4.1.152 GO:0008417 ... O30511 17251184
    96654 2nzx:B (1.9) BS01 GDP 2.4.1.152 GO:0008417 ... O30511 17251184
    96655 2nzx:C (1.9) BS01 GDP 2.4.1.152 GO:0008417 ... O30511 17251184
    96656 2nzy:A (2.05) BS01 FUC 2.4.1.152 GO:0008417 ... O30511 17251184
    96657 2nzy:A (2.05) BS02 GDP 2.4.1.152 GO:0008417 ... O30511 17251184
    96658 2nzy:B (2.05) BS01 FUC 2.4.1.152 GO:0008417 ... O30511 17251184
    96659 2nzy:B (2.05) BS02 GDP 2.4.1.152 GO:0008417 ... O30511 17251184
    96660 2nzy:C (2.05) BS01 FUC 2.4.1.152 GO:0008417 ... O30511 17251184
    96661 2nzy:C (2.05) BS02 GDP 2.4.1.152 GO:0008417 ... O30511 17251184
    96662 2o01:1 (3.4) BS01 CLA ? GO:0009765 ... Q01667 17476261
    96663 2o01:1 (3.4) BS02 CLA ? GO:0009765 ... Q01667 17476261
    96664 2o01:1 (3.4) BS03 CLA ? GO:0009765 ... Q01667 17476261
    96665 2o01:1 (3.4) BS04 CLA ? GO:0009765 ... Q01667 17476261
    96666 2o01:1 (3.4) BS05 CLA ? GO:0009765 ... Q01667 17476261
    96667 2o01:1 (3.4) BS06 CLA ? GO:0009765 ... Q01667 17476261
    96668 2o01:2 (3.4) BS01 CLA ? GO:0009765 ... Q41038 17476261
    96669 2o01:2 (3.4) BS02 CLA ? GO:0009765 ... Q41038 17476261
    96670 2o01:2 (3.4) BS03 CLA ? GO:0009765 ... Q41038 17476261
    96671 2o01:2 (3.4) BS04 CLA ? GO:0009765 ... Q41038 17476261
    96672 2o01:2 (3.4) BS05 CLA ? GO:0009765 ... Q41038 17476261
    96673 2o01:2 (3.4) BS06 CLA ? GO:0009765 ... Q41038 17476261
    96674 2o01:3 (3.4) BS01 CLA ? GO:0009765 ... Q9SY97 17476261
    96675 2o01:3 (3.4) BS02 CLA ? GO:0009765 ... Q9SY97 17476261
    96676 2o01:3 (3.4) BS03 CLA ? GO:0009765 ... Q9SY97 17476261
    96677 2o01:3 (3.4) BS04 CLA ? GO:0009765 ... Q9SY97 17476261
    96678 2o01:3 (3.4) BS05 CLA ? GO:0009765 ... Q9SY97 17476261
    96679 2o01:3 (3.4) BS06 CLA ? GO:0009765 ... Q9SY97 17476261
    96680 2o01:4 (3.4) BS01 CLA ? GO:0009765 ... Q9SQL2 17476261
    96681 2o01:4 (3.4) BS02 CLA ? GO:0009765 ... Q9SQL2 17476261
    96682 2o01:4 (3.4) BS03 CLA ? GO:0009765 ... Q9SQL2 17476261
    96683 2o01:4 (3.4) BS04 CLA ? GO:0009765 ... Q9SQL2 17476261
    96684 2o01:4 (3.4) BS05 CLA ? GO:0009765 ... Q9SQL2 17476261
    96685 2o01:4 (3.4) BS06 CLA ? GO:0009765 ... Q9SQL2 17476261
    96686 2o01:4 (3.4) BS07 CLA ? GO:0009765 ... Q9SQL2 17476261
    96687 2o01:A (3.4) BS01 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96688 2o01:A (3.4) BS02 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96689 2o01:A (3.4) BS03 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96690 2o01:A (3.4) BS04 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96691 2o01:A (3.4) BS05 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96692 2o01:A (3.4) BS06 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96693 2o01:A (3.4) BS07 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96694 2o01:A (3.4) BS08 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96695 2o01:A (3.4) BS09 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96696 2o01:A (3.4) BS10 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96697 2o01:A (3.4) BS11 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96698 2o01:A (3.4) BS12 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96699 2o01:A (3.4) BS13 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96700 2o01:A (3.4) BS14 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96701 2o01:A (3.4) BS15 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96702 2o01:A (3.4) BS16 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96703 2o01:A (3.4) BS17 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96704 2o01:A (3.4) BS18 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96705 2o01:A (3.4) BS19 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96706 2o01:A (3.4) BS20 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96707 2o01:A (3.4) BS21 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96708 2o01:A (3.4) BS22 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96709 2o01:A (3.4) BS23 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96710 2o01:A (3.4) BS24 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96711 2o01:A (3.4) BS25 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96712 2o01:A (3.4) BS26 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96713 2o01:A (3.4) BS27 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96714 2o01:A (3.4) BS28 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96715 2o01:A (3.4) BS29 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96716 2o01:A (3.4) BS30 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96717 2o01:A (3.4) BS31 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96718 2o01:A (3.4) BS32 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96719 2o01:A (3.4) BS33 PQN 1.97.1.12 GO:0000287 ... P05310 17476261
    96720 2o01:A (3.4) BS34 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96721 2o01:A (3.4) BS35 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96722 2o01:A (3.4) BS36 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96723 2o01:A (3.4) BS37 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96724 2o01:A (3.4) BS38 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96725 2o01:A (3.4) BS39 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96726 2o01:A (3.4) BS40 SF4 1.97.1.12 GO:0000287 ... P05310 17476261
    96727 2o01:A (3.4) BS41 CLA 1.97.1.12 GO:0000287 ... P05310 17476261
    96728 2o01:B (3.4) BS01 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96729 2o01:B (3.4) BS02 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96730 2o01:B (3.4) BS03 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96731 2o01:B (3.4) BS04 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96732 2o01:B (3.4) BS05 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96733 2o01:B (3.4) BS06 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96734 2o01:B (3.4) BS07 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96735 2o01:B (3.4) BS08 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96736 2o01:B (3.4) BS09 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96737 2o01:B (3.4) BS10 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96738 2o01:B (3.4) BS11 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96739 2o01:B (3.4) BS12 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96740 2o01:B (3.4) BS13 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96741 2o01:B (3.4) BS14 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96742 2o01:B (3.4) BS15 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96743 2o01:B (3.4) BS16 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96744 2o01:B (3.4) BS17 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96745 2o01:B (3.4) BS18 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96746 2o01:B (3.4) BS19 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96747 2o01:B (3.4) BS20 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96748 2o01:B (3.4) BS21 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96749 2o01:B (3.4) BS22 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96750 2o01:B (3.4) BS23 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96751 2o01:B (3.4) BS24 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96752 2o01:B (3.4) BS25 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96753 2o01:B (3.4) BS26 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96754 2o01:B (3.4) BS27 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96755 2o01:B (3.4) BS28 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96756 2o01:B (3.4) BS29 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96757 2o01:B (3.4) BS30 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96758 2o01:B (3.4) BS31 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96759 2o01:B (3.4) BS32 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96760 2o01:B (3.4) BS33 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96761 2o01:B (3.4) BS34 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96762 2o01:B (3.4) BS35 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96763 2o01:B (3.4) BS36 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96764 2o01:B (3.4) BS37 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96765 2o01:B (3.4) BS38 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96766 2o01:B (3.4) BS39 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96767 2o01:B (3.4) BS40 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96768 2o01:B (3.4) BS41 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96769 2o01:B (3.4) BS42 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96770 2o01:B (3.4) BS43 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96771 2o01:B (3.4) BS44 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96772 2o01:B (3.4) BS45 SF4 1.97.1.12 GO:0000287 ... P05311 17476261
    96773 2o01:B (3.4) BS46 PQN 1.97.1.12 GO:0000287 ... P05311 17476261
    96774 2o01:B (3.4) BS47 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96775 2o01:B (3.4) BS48 CLA 1.97.1.12 GO:0000287 ... P05311 17476261
    96776 2o01:C (3.4) BS01 SF4 1.97.1.12 GO:0009055 ... P10793 17476261
    96777 2o01:C (3.4) BS02 SF4 1.97.1.12 GO:0009055 ... P10793 17476261
    96778 2o01:F (3.4) BS01 CLA ? GO:0009522 ... P12355 17476261
    96779 2o01:F (3.4) BS02 CLA ? GO:0009522 ... P12355 17476261
    96780 2o01:F (3.4) BS03 CLA ? GO:0009522 ... P12355 17476261
    96781 2o01:F (3.4) BS04 CLA ? GO:0009522 ... P12355 17476261
    96782 2o01:G (3.4) BS01 CLA ? GO:0009522 ... P12357 17476261
    96783 2o01:G (3.4) BS02 CLA ? GO:0009522 ... P12357 17476261
    96784 2o01:G (3.4) BS03 CLA ? GO:0009522 ... P12357 17476261
    96785 2o01:H (3.4) BS01 CLA ? GO:0009522 ... P22179 17476261
    96786 2o01:I (3.4) BS01 CLA ? GO:0009522 ... P17227 17476261
    96787 2o01:I (3.4) BS02 CLA ? GO:0009522 ... P17227 17476261
    96788 2o01:I (3.4) BS03 CLA ? GO:0009522 ... P17227 17476261
    96789 2o01:J (3.4) BS01 CLA ? GO:0009522 ... P17230 17476261
    96790 2o01:K (3.4) BS01 CLA N/A N/A N/A 17476261
    96791 2o01:L (3.4) BS01 CLA ? GO:0009522 ... Q41385 17476261
    96792 2o01:L (3.4) BS02 CLA ? GO:0009522 ... Q41385 17476261
    96793 2o01:L (3.4) BS03 CLA ? GO:0009522 ... Q41385 17476261
    96794 2o01:L (3.4) BS04 CLA ? GO:0009522 ... Q41385 17476261
    96795 2o01:L (3.4) BS05 CLA ? GO:0009522 ... Q41385 17476261
    96796 2o01:L (3.4) BS06 CLA ? GO:0009522 ... Q41385 17476261
    96797 2o01:L (3.4) BS07 CLA ? GO:0009522 ... Q41385 17476261
    96798 2o02:A (1.5) BS01 peptide ? GO:0000122 ... P63104 17235285
    96799 2o02:B (1.5) BS01 peptide ? GO:0000122 ... P63104 17235285
    96800 2o03:A (2.699) BS01 ZN ? GO:0000976 ... P9WN85 17213192

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).