SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    969401 9f5x:Q (2.82) BS01 UQ5 N/A GO:0005743 ... P11658 40112058
    969402 9f5x:k (2.82) BS01 8Q1 N/A GO:0005743 ... Q6UKY8 40112058
    969403 9f5x:r (2.82) BS01 8Q1 N/A GO:0000035 ... Q6UKY4 40112058
    969404 9f5x:s (2.82) BS01 COO N/A GO:0009853 ... Q6S7R7 40112058
    969405 9f5x:s (2.82) BS02 ZN N/A GO:0009853 ... Q6S7R7 40112058
    969406 9f5x:t (2.82) BS01 COO N/A GO:0009853 ... A8JFK6 40112058
    969407 9f5y:A (2.51) BS01 FES N/A GO:0016491 ... Q6V9B3 40112058
    969408 9f5y:B (2.51) BS01 FMN N/A GO:0005739 ... A8ICJ1 40112058
    969409 9f5y:B (2.51) BS02 SF4 N/A GO:0005739 ... A8ICJ1 40112058
    969410 9f5y:C (2.51) BS01 FES N/A GO:0008137 ... A8IVJ7 40112058
    969411 9f5y:C (2.51) BS02 SF4 N/A GO:0008137 ... A8IVJ7 40112058
    969412 9f5y:C (2.51) BS03 SF4 N/A GO:0008137 ... A8IVJ7 40112058
    969413 9f5y:E (2.51) BS01 SF4 N/A GO:0005743 ... Q6V9A8 40112058
    969414 9f5y:F (2.51) BS01 SF4 N/A GO:0005739 ... Q6V9B0 40112058
    969415 9f5y:F (2.51) BS02 UQ5 N/A GO:0005739 ... Q6V9B0 40112058
    969416 9f5y:G (2.51) BS01 SF4 N/A GO:0003954 ... Q6V9B1 40112058
    969417 9f5y:G (2.51) BS02 SF4 N/A GO:0003954 ... Q6V9B1 40112058
    969418 9f5y:J (2.51) BS01 8Q1 N/A GO:0000035 ... Q6UKY4 40112058
    969419 9f5y:K (2.51) BS01 8Q1 N/A GO:0005743 ... Q6UKY9 40112058
    969420 9f5y:P (2.51) BS01 NDP N/A GO:0005739 ... Q6V506 40112058
    969421 9f5y:Q (2.51) BS01 UQ5 N/A GO:0005743 ... P11658 40112058
    969422 9f5y:k (2.51) BS01 8Q1 N/A GO:0005743 ... Q6UKY8 40112058
    969423 9f5y:r (2.51) BS01 8Q1 N/A GO:0000035 ... Q6UKY4 40112058
    969424 9f5y:s (2.51) BS01 COO N/A GO:0009853 ... Q6S7R7 40112058
    969425 9f5y:s (2.51) BS02 ZN N/A GO:0009853 ... Q6S7R7 40112058
    969426 9f5y:t (2.51) BS01 COO N/A GO:0009853 ... A8JFK6 40112058
    969427 9f5z:1A (2.39) BS01 UQ5 N/A GO:0005743 ... P23662 40112058
    969428 9f5z:1A (2.39) BS02 UQ5 N/A GO:0005743 ... P23662 40112058
    969429 9f5z:1A (2.39) BS03 HEC N/A GO:0005743 ... P23662 40112058
    969430 9f5z:1A (2.39) BS04 HEC N/A GO:0005743 ... P23662 40112058
    969431 9f5z:1B (2.39) BS01 UQ5 N/A GO:0005743 ... P23662 40112058
    969432 9f5z:1B (2.39) BS02 UQ5 N/A GO:0005743 ... P23662 40112058
    969433 9f5z:1B (2.39) BS03 HEC N/A GO:0005743 ... P23662 40112058
    969434 9f5z:1B (2.39) BS04 HEC N/A GO:0005743 ... P23662 40112058
    969435 9f5z:1E (2.39) BS01 HEC N/A GO:0005743 ... Q9FQ96 40112058
    969436 9f5z:1F (2.39) BS01 HEC N/A GO:0005743 ... Q9FQ96 40112058
    969437 9f5z:1M (2.39) BS01 ZN N/A GO:0004222 ... A8J5P7 40112058
    969438 9f60:2A (2.39) BS01 HEA N/A GO:0004129 ... P08681 40112058
    969439 9f60:2A (2.39) BS02 HEA N/A GO:0004129 ... P08681 40112058
    969440 9f60:2A (2.39) BS03 CU N/A GO:0004129 ... P08681 40112058
    969441 9f60:2A (2.39) BS04 MG N/A GO:0004129 ... P08681 40112058
    969442 9f60:2C (2.39) BS01 CUA N/A GO:0004129 ... Q9AU02 40112058
    969443 9f61:3A (2.55) BS01 HEA N/A GO:0004129 ... P08681 40112058
    969444 9f61:3A (2.55) BS02 HEA N/A GO:0004129 ... P08681 40112058
    969445 9f61:3A (2.55) BS03 CU N/A GO:0004129 ... P08681 40112058
    969446 9f61:3A (2.55) BS04 MG N/A GO:0004129 ... P08681 40112058
    969447 9f61:3C (2.55) BS01 CUA N/A GO:0004129 ... Q9AU02 40112058
    969448 9f62:1A (5.44) BS01 HEM N/A GO:0005743 ... P23662 40112058
    969449 9f62:1A (5.44) BS02 HEM N/A GO:0005743 ... P23662 40112058
    969450 9f62:1B (5.44) BS01 HEM N/A GO:0005743 ... P23662 40112058
    969451 9f62:1B (5.44) BS02 HEM N/A GO:0005743 ... P23662 40112058
    969452 9f62:1E (5.44) BS01 HEC N/A GO:0005743 ... Q9FQ96 40112058
    969453 9f62:1F (5.44) BS01 HEC N/A GO:0005743 ... Q9FQ96 40112058
    969454 9f62:1M (5.44) BS01 ZN N/A GO:0004222 ... A8J5P7 40112058
    969455 9f62:2A (5.44) BS01 HEA N/A GO:0004129 ... P08681 40112058
    969456 9f62:2A (5.44) BS02 HEA N/A GO:0004129 ... P08681 40112058
    969457 9f62:2A (5.44) BS03 CU N/A GO:0004129 ... P08681 40112058
    969458 9f62:2A (5.44) BS04 MG N/A GO:0004129 ... P08681 40112058
    969459 9f62:2C (5.44) BS01 CUA N/A GO:0004129 ... Q9AU02 40112058
    969460 9f62:3A (5.44) BS01 HEA N/A GO:0004129 ... P08681 40112058
    969461 9f62:3A (5.44) BS02 CU N/A GO:0004129 ... P08681 40112058
    969462 9f62:3A (5.44) BS03 MG N/A GO:0004129 ... P08681 40112058
    969463 9f62:3A (5.44) BS04 HEA N/A GO:0004129 ... P08681 40112058
    969464 9f62:3C (5.44) BS01 CUA N/A GO:0004129 ... Q9AU02 40112058
    969465 9f62:4A (5.44) BS01 CU N/A GO:0004129 ... P08681 40112058
    969466 9f62:4A (5.44) BS02 HEA N/A GO:0004129 ... P08681 40112058
    969467 9f62:4A (5.44) BS03 MG N/A GO:0004129 ... P08681 40112058
    969468 9f62:4A (5.44) BS04 HEA N/A GO:0004129 ... P08681 40112058
    969469 9f62:4C (5.44) BS01 CUA N/A GO:0004129 ... Q9AU02 40112058
    969470 9f62:5A (5.44) BS01 FES N/A GO:0016491 ... Q6V9B3 40112058
    969471 9f62:5B (5.44) BS01 FMN N/A GO:0005739 ... A8ICJ1 40112058
    969472 9f62:5B (5.44) BS02 SF4 N/A GO:0005739 ... A8ICJ1 40112058
    969473 9f62:5C (5.44) BS01 FES N/A GO:0008137 ... A8IVJ7 40112058
    969474 9f62:5C (5.44) BS02 SF4 N/A GO:0008137 ... A8IVJ7 40112058
    969475 9f62:5C (5.44) BS03 SF4 N/A GO:0008137 ... A8IVJ7 40112058
    969476 9f62:5E (5.44) BS01 SF4 N/A GO:0005743 ... Q6V9A8 40112058
    969477 9f62:5F (5.44) BS01 SF4 N/A GO:0005739 ... Q6V9B0 40112058
    969478 9f62:5G (5.44) BS01 SF4 N/A GO:0003954 ... Q6V9B1 40112058
    969479 9f62:5G (5.44) BS02 SF4 N/A GO:0003954 ... Q6V9B1 40112058
    969480 9f62:5J (5.44) BS01 8Q1 N/A GO:0000035 ... Q6UKY4 40112058
    969481 9f62:5K (5.44) BS01 8Q1 N/A GO:0005743 ... Q6UKY9 40112058
    969482 9f62:5P (5.44) BS01 NDP N/A GO:0005739 ... Q6V506 40112058
    969483 9f62:5k (5.44) BS01 8Q1 N/A GO:0005743 ... Q6UKY8 40112058
    969484 9f62:5r (5.44) BS01 8Q1 N/A GO:0000035 ... Q6UKY4 40112058
    969485 9f62:5s (5.44) BS01 COO N/A GO:0009853 ... Q6S7R7 40112058
    969486 9f62:5s (5.44) BS02 ZN N/A GO:0009853 ... Q6S7R7 40112058
    969487 9f62:5t (5.44) BS01 COO N/A GO:0009853 ... A8JFK6 40112058
    969488 9f62:6A (5.44) BS01 HEM N/A GO:0005743 ... P23662 40112058
    969489 9f62:6A (5.44) BS02 HEM N/A GO:0005743 ... P23662 40112058
    969490 9f62:6B (5.44) BS01 HEM N/A GO:0005743 ... P23662 40112058
    969491 9f62:6B (5.44) BS02 HEM N/A GO:0005743 ... P23662 40112058
    969492 9f62:6E (5.44) BS01 HEC N/A GO:0005743 ... Q9FQ96 40112058
    969493 9f62:6F (5.44) BS01 HEC N/A GO:0005743 ... Q9FQ96 40112058
    969494 9f62:6M (5.44) BS01 ZN N/A GO:0004222 ... A8J5P7 40112058
    969495 9f62:7A (5.44) BS01 HEA N/A GO:0004129 ... P08681 40112058
    969496 9f62:7A (5.44) BS02 HEA N/A GO:0004129 ... P08681 40112058
    969497 9f62:7A (5.44) BS03 CU N/A GO:0004129 ... P08681 40112058
    969498 9f62:7A (5.44) BS04 MG N/A GO:0004129 ... P08681 40112058
    969499 9f62:7C (5.44) BS01 CUA N/A GO:0004129 ... Q9AU02 40112058
    969500 9f62:8A (5.44) BS01 HEA N/A GO:0004129 ... P08681 40112058
    969501 9f62:8A (5.44) BS02 CU N/A GO:0004129 ... P08681 40112058
    969502 9f62:8A (5.44) BS03 MG N/A GO:0004129 ... P08681 40112058
    969503 9f62:8A (5.44) BS04 HEA N/A GO:0004129 ... P08681 40112058
    969504 9f62:8C (5.44) BS01 CUA N/A GO:0004129 ... Q9AU02 40112058
    969505 9f62:9A (5.44) BS01 MG N/A GO:0004129 ... P08681 40112058
    969506 9f62:9A (5.44) BS02 HEA N/A GO:0004129 ... P08681 40112058
    969507 9f62:9A (5.44) BS03 HEA N/A GO:0004129 ... P08681 40112058
    969508 9f62:9A (5.44) BS04 CU N/A GO:0004129 ... P08681 40112058
    969509 9f62:9C (5.44) BS01 CUA N/A GO:0004129 ... Q9AU02 40112058
    969510 9f62:A (5.44) BS01 FES N/A GO:0016491 ... Q6V9B3 40112058
    969511 9f62:B (5.44) BS01 SF4 N/A GO:0005739 ... A8ICJ1 40112058
    969512 9f62:B (5.44) BS02 FMN N/A GO:0005739 ... A8ICJ1 40112058
    969513 9f62:C (5.44) BS01 SF4 N/A GO:0008137 ... A8IVJ7 40112058
    969514 9f62:C (5.44) BS02 SF4 N/A GO:0008137 ... A8IVJ7 40112058
    969515 9f62:C (5.44) BS03 FES N/A GO:0008137 ... A8IVJ7 40112058
    969516 9f62:E (5.44) BS01 SF4 N/A GO:0005743 ... Q6V9A8 40112058
    969517 9f62:F (5.44) BS01 SF4 N/A GO:0005739 ... Q6V9B0 40112058
    969518 9f62:G (5.44) BS01 SF4 N/A GO:0003954 ... Q6V9B1 40112058
    969519 9f62:G (5.44) BS02 SF4 N/A GO:0003954 ... Q6V9B1 40112058
    969520 9f62:J (5.44) BS01 8Q1 N/A GO:0000035 ... Q6UKY4 40112058
    969521 9f62:K (5.44) BS01 8Q1 N/A GO:0005743 ... Q6UKY9 40112058
    969522 9f62:P (5.44) BS01 NDP N/A GO:0005739 ... Q6V506 40112058
    969523 9f62:k (5.44) BS01 8Q1 N/A GO:0005743 ... Q6UKY8 40112058
    969524 9f62:r (5.44) BS01 8Q1 N/A GO:0000035 ... Q6UKY4 40112058
    969525 9f62:s (5.44) BS01 COO N/A GO:0009853 ... Q6S7R7 40112058
    969526 9f62:s (5.44) BS02 ZN N/A GO:0009853 ... Q6S7R7 40112058
    969527 9f62:t (5.44) BS01 COO N/A GO:0009853 ... A8JFK6 40112058
    969528 9f64:A (1.75) BS01 A1IAQ N/A GO:0008379 ... O25151 N/A
    969529 9f65:A (1.95) BS01 A1IAR N/A GO:0008379 ... O25151 N/A
    969530 9f66:A (1.85) BS01 COH N/A GO:0004392 ... P71119 39352411
    969531 9f67:2 (2.8) BS01 rna N/A GO:0000339 ... Q585L4 39814716
    969532 9f69:A (1.17) BS01 DXX N/A GO:0004807 ... P60174 40014465
    969533 9f6b:A (1.57) BS01 A1IAT N/A N/A O14786 41262564
    969534 9f6b:B (1.57) BS01 A1IAT N/A N/A O14786 41262564
    969535 9f6b:B (1.57) BS02 A1IAT N/A N/A O14786 41262564
    969536 9f6c:A (2.33) BS01 MG N/A GO:0003774 ... Q9BE39 39196032
    969537 9f6c:A (2.33) BS02 6I6 N/A GO:0003774 ... Q9BE39 39196032
    969538 9f6c:A (2.33) BS03 ADP N/A GO:0003774 ... Q9BE39 39196032
    969539 9f6c:B (2.33) BS01 MG N/A GO:0003774 ... Q9BE39 39196032
    969540 9f6c:B (2.33) BS02 6I6 N/A GO:0003774 ... Q9BE39 39196032
    969541 9f6c:B (2.33) BS03 ADP N/A GO:0003774 ... Q9BE39 39196032
    969542 9f6d:A (3.6) BS01 dna N/A GO:0000166 ... Q07864 39112807
    969543 9f6d:A (3.6) BS02 dna N/A GO:0000166 ... Q07864 39112807
    969544 9f6d:A (3.6) BS03 SF4 N/A GO:0000166 ... Q07864 39112807
    969545 9f6d:A (3.6) BS04 DDS N/A GO:0000166 ... Q07864 39112807
    969546 9f6d:A (3.6) BS05 MG N/A GO:0000166 ... Q07864 39112807
    969547 9f6e:A (3.74) BS01 dna N/A GO:0000166 ... Q07864 39112807
    969548 9f6e:A (3.74) BS02 dna N/A GO:0000166 ... Q07864 39112807
    969549 9f6e:A (3.74) BS03 SF4 N/A GO:0000166 ... Q07864 39112807
    969550 9f6e:A (3.74) BS04 DDS N/A GO:0000166 ... Q07864 39112807
    969551 9f6f:A (3.75) BS01 dna N/A GO:0000166 ... Q07864 39112807
    969552 9f6f:A (3.75) BS02 dna N/A GO:0000166 ... Q07864 39112807
    969553 9f6f:A (3.75) BS03 SF4 N/A GO:0000166 ... Q07864 39112807
    969554 9f6f:A (3.75) BS04 DDS N/A GO:0000166 ... Q07864 39112807
    969555 9f6g:A (1.5) BS01 AYE N/A GO:0004843 ... P54578
    Q70CQ3
    Q9P2H5
    40325251
    969556 9f6h:B (2.42) BS01 peptide N/A GO:0004252 ... P00766 40562762
    969557 9f6h:B (2.42) BS02 peptide N/A GO:0004252 ... P00766 40562762
    969558 9f6h:C (2.42) BS01 peptide N/A GO:0004252 ... P00766 40562762
    969559 9f6h:C (2.42) BS02 peptide N/A GO:0004252 ... P00766 40562762
    969560 9f6i:A (3.3) BS01 dna N/A GO:0000166 ... Q07864 39112807
    969561 9f6i:A (3.3) BS02 dna N/A GO:0000166 ... Q07864 39112807
    969562 9f6i:A (3.3) BS03 SF4 N/A GO:0000166 ... Q07864 39112807
    969563 9f6i:A (3.3) BS04 DDS N/A GO:0000166 ... Q07864 39112807
    969564 9f6i:A (3.3) BS05 CA N/A GO:0000166 ... Q07864 39112807
    969565 9f6j:A (3.9) BS01 dna N/A GO:0000166 ... Q07864 39112807
    969566 9f6j:A (3.9) BS02 dna N/A GO:0000166 ... Q07864 39112807
    969567 9f6j:A (3.9) BS03 SF4 N/A GO:0000166 ... Q07864 39112807
    969568 9f6k:A (4.2) BS01 dna N/A GO:0000166 ... Q07864 39112807
    969569 9f6k:A (4.2) BS02 SF4 N/A GO:0000166 ... Q07864 39112807
    969570 9f6l:A (3.9) BS01 dna N/A GO:0000166 ... Q07864 39112807
    969571 9f6l:A (3.9) BS02 dna N/A GO:0000166 ... Q07864 39112807
    969572 9f6l:A (3.9) BS03 SF4 N/A GO:0000166 ... Q07864 39112807
    969573 9f6l:A (3.9) BS04 CA N/A GO:0000166 ... Q07864 39112807
    969574 9f6l:A (3.9) BS05 CA N/A GO:0000166 ... Q07864 39112807
    969575 9f6n:A (3.6) BS01 MN N/A GO:0005375 ... P49281 39824808
    969576 9f6p:A (3.7) BS01 MN N/A GO:0001818 ... P49279 39824808
    969577 9f6r:A (2.75) BS01 A1IAS N/A GO:0001507 ... P22303 N/A
    969578 9f6r:A (2.75) BS02 MG N/A GO:0001507 ... P22303 N/A
    969579 9f6r:A (2.75) BS03 MG N/A GO:0001507 ... P22303 N/A
    969580 9f6r:A (2.75) BS04 MG N/A GO:0001507 ... P22303 N/A
    969581 9f6r:A (2.75) BS05 MG N/A GO:0001507 ... P22303 N/A
    969582 9f6r:B (2.75) BS01 SIA N/A GO:0001507 ... P22303 N/A
    969583 9f6r:B (2.75) BS02 MG N/A GO:0001507 ... P22303 N/A
    969584 9f6r:B (2.75) BS03 MG N/A GO:0001507 ... P22303 N/A
    969585 9f6s:A (1.0) BS01 peptide N/A N/A Q96HC4 N/A
    969586 9f6t:A (3.5) BS01 GTP N/A GO:0003924 ... A0A7W7YIU5 40120574
    969587 9f6t:B (3.5) BS01 GTP N/A GO:0003924 ... A0A7W7YJ10 40120574
    969588 9f6u:A (3.6) BS01 GDP N/A GO:0003924 ... A0A7W7YIU5 40120574
    969589 9f6u:B (3.6) BS01 GTP N/A GO:0003924 ... A0A7W7YJ10 40120574
    969590 9f6v:A (3.5) BS01 GTP N/A GO:0003924 ... A0A7W7YIU5 40120574
    969591 9f6w:A (2.2) BS01 A1IAC N/A N/A Q9UIF9 N/A
    969592 9f6x:A (2.68) BS01 A1IAZ N/A GO:0004672 ... P36897 39441620
    969593 9f6y:A (2.98) BS01 peptide N/A GO:0003713 ... Q9ULK4 40263353
    969594 9f70:A (2.3) BS01 A1IAA N/A N/A Q9UIF9 N/A
    969595 9f71:A (2.35) BS01 A1IAB N/A N/A Q9UIF9 N/A
    969596 9f73:A (3.0) BS01 dna N/A GO:0003677 ... P03070 40108462
    969597 9f73:A (3.0) BS02 ATP N/A GO:0003677 ... P03070 40108462
    969598 9f73:B (3.0) BS01 dna N/A GO:0003677 ... P03070 40108462
    969599 9f73:B (3.0) BS02 ATP N/A GO:0003677 ... P03070 40108462
    969600 9f73:B (3.0) BS03 ATP N/A GO:0003677 ... P03070 40108462

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).