SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    970201 9fai:AAA (1.272) BS01 ZN N/A GO:0004064 ... P00918 39291024
    970202 9fai:AAA (1.272) BS02 A1IBT N/A GO:0004064 ... P00918 39291024
    970203 9faj:A (2.6) BS01 PIO N/A GO:0004888 ... P14867 N/A
    970204 9faj:A (2.6) BS02 PGW N/A GO:0004888 ... P14867 N/A
    970205 9faj:A (2.6) BS03 ABU N/A GO:0004888 ... P14867 N/A
    970206 9faj:B (2.6) BS01 ABU N/A GO:0004888 ... P28472 N/A
    970207 9faj:B (2.6) BS02 PGW N/A GO:0004888 ... P28472 N/A
    970208 9faj:C (2.6) BS01 MAN N/A GO:0004888 ... P18507 N/A
    970209 9faj:C (2.6) BS02 MAN N/A GO:0004888 ... P18507 N/A
    970210 9faj:C (2.6) BS03 CLR N/A GO:0004888 ... P18507 N/A
    970211 9faj:C (2.6) BS04 PGW N/A GO:0004888 ... P18507 N/A
    970212 9faj:D (2.6) BS01 PIO N/A GO:0004888 ... P14867 N/A
    970213 9faj:D (2.6) BS02 PGW N/A GO:0004888 ... P14867 N/A
    970214 9faj:D (2.6) BS03 ABU N/A GO:0004888 ... P14867 N/A
    970215 9faj:E (2.6) BS01 PGW N/A GO:0004888 ... P28472 N/A
    970216 9faj:E (2.6) BS02 PGW N/A GO:0004888 ... P28472 N/A
    970217 9faj:E (2.6) BS03 ABU N/A GO:0004888 ... P28472 N/A
    970218 9faj:L (2.6) BS01 CLR N/A N/A Q7Z7J7 N/A
    970219 9faj:L (2.6) BS02 PGW N/A N/A Q7Z7J7 N/A
    970220 9faj:L (2.6) BS03 PGW N/A N/A Q7Z7J7 N/A
    970221 9fak:A (2.6) BS01 PIO N/A GO:0004888 ... P14867 N/A
    970222 9fak:A (2.6) BS02 PGW N/A GO:0004888 ... P14867 N/A
    970223 9fak:A (2.6) BS03 ABU N/A GO:0004888 ... P14867 N/A
    970224 9fak:B (2.6) BS01 ABU N/A GO:0004888 ... P28472 N/A
    970225 9fak:B (2.6) BS02 PGW N/A GO:0004888 ... P28472 N/A
    970226 9fak:C (2.6) BS01 MAN N/A GO:0004888 ... P18507 N/A
    970227 9fak:C (2.6) BS02 CLR N/A GO:0004888 ... P18507 N/A
    970228 9fak:D (2.6) BS01 MAN N/A GO:0004888 ... P14867 N/A
    970229 9fak:D (2.6) BS02 PIO N/A GO:0004888 ... P14867 N/A
    970230 9fak:D (2.6) BS03 PGW N/A GO:0004888 ... P14867 N/A
    970231 9fak:D (2.6) BS04 ABU N/A GO:0004888 ... P14867 N/A
    970232 9fak:E (2.6) BS01 PGW N/A GO:0004888 ... P28472 N/A
    970233 9fak:E (2.6) BS02 PGW N/A GO:0004888 ... P28472 N/A
    970234 9fak:E (2.6) BS03 ABU N/A GO:0004888 ... P28472 N/A
    970235 9fak:L (2.6) BS01 PGW N/A N/A Q7Z7J7 N/A
    970236 9fak:L (2.6) BS02 CLR N/A N/A Q7Z7J7 N/A
    970237 9fak:L (2.6) BS03 PGW N/A N/A Q7Z7J7 N/A
    970238 9fal:A (1.39) BS01 A1IBQ N/A GO:0004348 ... P04062 38932616
    970239 9fal:A (1.39) BS02 BAQ N/A GO:0004348 ... P04062 38932616
    970240 9fam:A (3.5) BS01 PIO N/A GO:0004888 ... P14867 N/A
    970241 9fam:A (3.5) BS02 ABU N/A GO:0004888 ... P14867 N/A
    970242 9fam:B (3.5) BS01 ABU N/A GO:0004888 ... P28472 N/A
    970243 9fam:B (3.5) BS02 PGW N/A GO:0004888 ... P28472 N/A
    970244 9fam:C (3.5) BS01 MAN N/A GO:0004888 ... P18507 N/A
    970245 9fam:C (3.5) BS02 CLR N/A GO:0004888 ... P18507 N/A
    970246 9fam:C (3.5) BS03 PGW N/A GO:0004888 ... P18507 N/A
    970247 9fam:D (3.5) BS01 MAN N/A GO:0004888 ... P14867 N/A
    970248 9fam:D (3.5) BS02 PIO N/A GO:0004888 ... P14867 N/A
    970249 9fam:D (3.5) BS03 ABU N/A GO:0004888 ... P14867 N/A
    970250 9fam:E (3.5) BS01 ABU N/A GO:0004888 ... P28472 N/A
    970251 9fam:L (3.5) BS01 CLR N/A N/A Q7Z7J7 N/A
    970252 9fam:L (3.5) BS02 PGW N/A N/A Q7Z7J7 N/A
    970253 9fam:L (3.5) BS03 PGW N/A N/A Q7Z7J7 N/A
    970254 9fan:C (2.9) BS01 CLR N/A GO:0006811 ... P18507 N/A
    970255 9fan:L (2.9) BS01 CLR N/A N/A Q7Z7J7 N/A
    970256 9fan:L (2.9) BS02 PGW N/A N/A Q7Z7J7 N/A
    970257 9fao:AAA (1.206) BS01 ZN N/A GO:0004064 ... P00918 39291024
    970258 9fao:AAA (1.206) BS02 JKE N/A GO:0004064 ... P00918 39291024
    970259 9fap:A (2.8) BS01 PIO N/A GO:0004888 ... P14867 N/A
    970260 9fap:A (2.8) BS02 PGW N/A GO:0004888 ... P14867 N/A
    970261 9fap:B (2.8) BS01 MAN N/A GO:0004888 ... P28472 N/A
    970262 9fap:B (2.8) BS02 PGW N/A GO:0004888 ... P28472 N/A
    970263 9fap:C (2.8) BS01 MAN N/A GO:0004888 ... P18507 N/A
    970264 9fap:C (2.8) BS02 CLR N/A GO:0004888 ... P18507 N/A
    970265 9fap:C (2.8) BS03 PGW N/A GO:0004888 ... P18507 N/A
    970266 9fap:D (2.8) BS01 MAN N/A GO:0004888 ... P14867 N/A
    970267 9fap:D (2.8) BS02 PIO N/A GO:0004888 ... P14867 N/A
    970268 9fap:D (2.8) BS03 PGW N/A GO:0004888 ... P14867 N/A
    970269 9fap:D (2.8) BS04 PGW N/A GO:0004888 ... P14867 N/A
    970270 9fap:L (2.8) BS01 CLR N/A N/A Q7Z7J7 N/A
    970271 9fap:L (2.8) BS02 PGW N/A N/A Q7Z7J7 N/A
    970272 9fap:L (2.8) BS03 PGW N/A N/A Q7Z7J7 N/A
    970273 9faq:A (2.9) BS01 PIO N/A GO:0004888 ... P14867 N/A
    970274 9faq:B (2.9) BS01 PGW N/A GO:0004888 ... P28472 N/A
    970275 9faq:C (2.9) BS01 MAN N/A GO:0004888 ... P18507 N/A
    970276 9faq:C (2.9) BS02 PGW N/A GO:0004888 ... P18507 N/A
    970277 9faq:C (2.9) BS03 CLR N/A GO:0004888 ... P18507 N/A
    970278 9faq:D (2.9) BS01 PIO N/A GO:0004888 ... P14867 N/A
    970279 9faq:D (2.9) BS02 PGW N/A GO:0004888 ... P14867 N/A
    970280 9faq:D (2.9) BS03 PGW N/A GO:0004888 ... P14867 N/A
    970281 9faq:L (2.9) BS01 PGW N/A N/A Q7Z7J7 N/A
    970282 9faq:L (2.9) BS02 CLR N/A N/A Q7Z7J7 N/A
    970283 9faq:L (2.9) BS03 PGW N/A N/A Q7Z7J7 N/A
    970284 9far:C (2.9) BS01 CLR N/A GO:0006811 ... P18507 N/A
    970285 9far:L (2.9) BS01 PGW N/A N/A Q7Z7J7 N/A
    970286 9fas:A (2.5) BS01 PIO N/A GO:0004888 ... P14867 N/A
    970287 9fas:A (2.5) BS02 PGW N/A GO:0004888 ... P14867 N/A
    970288 9fas:A (2.5) BS03 PGW N/A GO:0004888 ... P14867 N/A
    970289 9fas:C (2.5) BS01 MAN N/A GO:0004888 ... P18507 N/A
    970290 9fas:C (2.5) BS02 MAN N/A GO:0004888 ... P18507 N/A
    970291 9fas:D (2.5) BS01 A8W N/A GO:0004888 ... P14867 N/A
    970292 9fas:D (2.5) BS02 PIO N/A GO:0004888 ... P14867 N/A
    970293 9fas:D (2.5) BS03 PGW N/A GO:0004888 ... P14867 N/A
    970294 9fat:A (3.6) BS01 PIO N/A GO:0004888 ... P14867 N/A
    970295 9fat:A (3.6) BS02 PGW N/A GO:0004888 ... P14867 N/A
    970296 9fat:B (3.6) BS01 PGW N/A GO:0004888 ... P28472 N/A
    970297 9fat:C (3.6) BS01 MAN N/A GO:0004888 ... P18507 N/A
    970298 9fat:C (3.6) BS02 PGW N/A GO:0004888 ... P18507 N/A
    970299 9fat:C (3.6) BS03 CLR N/A GO:0004888 ... P18507 N/A
    970300 9fat:D (3.6) BS01 MAN N/A GO:0004888 ... P14867 N/A
    970301 9fat:D (3.6) BS02 PIO N/A GO:0004888 ... P14867 N/A
    970302 9fat:L (3.6) BS01 PGW N/A N/A Q7Z7J7 N/A
    970303 9fat:L (3.6) BS02 PGW N/A N/A Q7Z7J7 N/A
    970304 9fau:B (3.1) BS01 PGW N/A GO:0004888 ... P28472 N/A
    970305 9fau:C (3.1) BS01 PGW N/A GO:0004888 ... P18507 N/A
    970306 9fau:C (3.1) BS02 CLR N/A GO:0004888 ... P18507 N/A
    970307 9fau:F (3.1) BS01 MAN N/A N/A N/A N/A
    970308 9fau:L (3.1) BS01 PGW N/A N/A Q7Z7J7 N/A
    970309 9fau:L (3.1) BS02 PGW N/A N/A Q7Z7J7 N/A
    970310 9fav:B (3.2) BS01 MAN N/A GO:0004888 ... P28472 N/A
    970311 9fav:B (3.2) BS02 PGW N/A GO:0004888 ... P28472 N/A
    970312 9fav:C (3.2) BS01 CLR N/A GO:0004888 ... P18507 N/A
    970313 9faw:B (2.9) BS01 PGW N/A GO:0004888 ... P28472 N/A
    970314 9faw:C (2.9) BS01 PGW N/A GO:0004888 ... P18507 N/A
    970315 9faw:C (2.9) BS02 CLR N/A GO:0004888 ... P18507 N/A
    970316 9faw:L (2.9) BS01 PGW N/A N/A Q7Z7J7 N/A
    970317 9faw:L (2.9) BS02 CLR N/A N/A Q7Z7J7 N/A
    970318 9fax:B (2.9) BS01 PGW N/A GO:0004888 ... P28472 N/A
    970319 9fax:C (2.9) BS01 CLR N/A GO:0004888 ... P18507 N/A
    970320 9fax:C (2.9) BS02 PGW N/A GO:0004888 ... P18507 N/A
    970321 9fax:D (2.9) BS01 PGW N/A GO:0004888 ... P28472 N/A
    970322 9fax:E (2.9) BS01 CLR N/A GO:0004888 ... P18507 N/A
    970323 9fax:I (2.9) BS01 CLR N/A N/A Q7Z7J7 N/A
    970324 9fax:I (2.9) BS02 PGW N/A N/A Q7Z7J7 N/A
    970325 9fax:I (2.9) BS03 PGW N/A N/A Q7Z7J7 N/A
    970326 9fax:L (2.9) BS01 PGW N/A N/A Q7Z7J7 N/A
    970327 9fax:L (2.9) BS02 PGW N/A N/A Q7Z7J7 N/A
    970328 9fay:A (1.4) BS01 A1IBR N/A GO:0004348 ... P04062 38932616
    970329 9faz:A (1.63) BS01 A1IBP N/A GO:0004348 ... P04062 38932616
    970330 9fb0:A (3.0) BS01 dna N/A GO:0003677 ... P03070 40108462
    970331 9fb0:A (3.0) BS02 ATP N/A GO:0003677 ... P03070 40108462
    970332 9fb0:B (3.0) BS01 dna N/A GO:0003677 ... P03070 40108462
    970333 9fb0:B (3.0) BS02 ATP N/A GO:0003677 ... P03070 40108462
    970334 9fb0:B (3.0) BS03 ATP N/A GO:0003677 ... P03070 40108462
    970335 9fb0:C (3.0) BS01 dna N/A GO:0003677 ... P03070 40108462
    970336 9fb0:C (3.0) BS02 ATP N/A GO:0003677 ... P03070 40108462
    970337 9fb0:C (3.0) BS03 ATP N/A GO:0003677 ... P03070 40108462
    970338 9fb0:D (3.0) BS01 dna N/A GO:0003677 ... P03070 40108462
    970339 9fb0:D (3.0) BS02 ATP N/A GO:0003677 ... P03070 40108462
    970340 9fb0:E (3.0) BS01 dna N/A GO:0003677 ... P03070 40108462
    970341 9fb0:E (3.0) BS02 ATP N/A GO:0003677 ... P03070 40108462
    970342 9fb0:E (3.0) BS03 ATP N/A GO:0003677 ... P03070 40108462
    970343 9fb0:F (3.0) BS01 dna N/A GO:0003677 ... P03070 40108462
    970344 9fb0:F (3.0) BS02 ATP N/A GO:0003677 ... P03070 40108462
    970345 9fb2:A (1.14) BS01 A1IBO N/A GO:0004348 ... P04062 38932616
    970346 9fb3:A (1.33) BS01 A1IB0 N/A GO:0001523 ... P15121 N/A
    970347 9fb3:A (1.33) BS02 NAP N/A GO:0001523 ... P15121 N/A
    970348 9fb4:A (3.13) BS01 dna N/A GO:0003677 ... P03070 40108462
    970349 9fb4:A (3.13) BS02 ATP N/A GO:0003677 ... P03070 40108462
    970350 9fb4:B (3.13) BS01 dna N/A GO:0003677 ... P03070 40108462
    970351 9fb4:B (3.13) BS02 ATP N/A GO:0003677 ... P03070 40108462
    970352 9fb4:B (3.13) BS03 ATP N/A GO:0003677 ... P03070 40108462
    970353 9fb4:C (3.13) BS01 dna N/A GO:0003677 ... P03070 40108462
    970354 9fb4:C (3.13) BS02 ATP N/A GO:0003677 ... P03070 40108462
    970355 9fb4:C (3.13) BS03 ATP N/A GO:0003677 ... P03070 40108462
    970356 9fb4:D (3.13) BS01 dna N/A GO:0003677 ... P03070 40108462
    970357 9fb4:D (3.13) BS02 ATP N/A GO:0003677 ... P03070 40108462
    970358 9fb4:E (3.13) BS01 dna N/A GO:0003677 ... P03070 40108462
    970359 9fb4:E (3.13) BS02 ATP N/A GO:0003677 ... P03070 40108462
    970360 9fb4:F (3.13) BS01 ATP N/A GO:0003677 ... P03070 40108462
    970361 9fb5:A (3.0) BS01 dna N/A GO:0003677 ... P03070 40108462
    970362 9fb5:A (3.0) BS02 ATP N/A GO:0003677 ... P03070 40108462
    970363 9fb5:B (3.0) BS01 dna N/A GO:0003677 ... P03070 40108462
    970364 9fb5:B (3.0) BS02 ATP N/A GO:0003677 ... P03070 40108462
    970365 9fb5:C (3.0) BS01 dna N/A GO:0003677 ... P03070 40108462
    970366 9fb5:C (3.0) BS02 ATP N/A GO:0003677 ... P03070 40108462
    970367 9fb5:D (3.0) BS01 dna N/A GO:0003677 ... P03070 40108462
    970368 9fb5:D (3.0) BS02 ATP N/A GO:0003677 ... P03070 40108462
    970369 9fb5:E (3.0) BS01 dna N/A GO:0003677 ... P03070 40108462
    970370 9fb5:E (3.0) BS02 ATP N/A GO:0003677 ... P03070 40108462
    970371 9fb5:F (3.0) BS01 dna N/A GO:0003677 ... P03070 40108462
    970372 9fb5:F (3.0) BS02 ATP N/A GO:0003677 ... P03070 40108462
    970373 9fb6:A (3.13) BS01 dna N/A GO:0003677 ... P03070 40108462
    970374 9fb6:A (3.13) BS02 ATP N/A GO:0003677 ... P03070 40108462
    970375 9fb6:B (3.13) BS01 dna N/A GO:0003677 ... P03070 40108462
    970376 9fb6:B (3.13) BS02 ATP N/A GO:0003677 ... P03070 40108462
    970377 9fb6:B (3.13) BS03 ATP N/A GO:0003677 ... P03070 40108462
    970378 9fb6:C (3.13) BS01 dna N/A GO:0003677 ... P03070 40108462
    970379 9fb6:C (3.13) BS02 ATP N/A GO:0003677 ... P03070 40108462
    970380 9fb6:C (3.13) BS03 ATP N/A GO:0003677 ... P03070 40108462
    970381 9fb6:D (3.13) BS01 dna N/A GO:0003677 ... P03070 40108462
    970382 9fb6:D (3.13) BS02 ATP N/A GO:0003677 ... P03070 40108462
    970383 9fb6:E (3.13) BS01 dna N/A GO:0003677 ... P03070 40108462
    970384 9fb6:E (3.13) BS02 ATP N/A GO:0003677 ... P03070 40108462
    970385 9fb6:F (3.13) BS01 ATP N/A GO:0003677 ... P03070 40108462
    970386 9fb7:A (2.02) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 N/A
    970387 9fb7:B (2.02) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 N/A
    970388 9fb7:C (2.02) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 N/A
    970389 9fb7:D (2.02) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 N/A
    970390 9fb7:E (2.02) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 N/A
    970391 9fb7:F (2.02) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 N/A
    970392 9fb8:A (1.727) BS01 ANP N/A GO:0000723 ... Q9H611 39417423
    970393 9fb8:A (1.727) BS02 O0J N/A GO:0000723 ... Q9H611 39417423
    970394 9fb8:A (1.727) BS03 O0J N/A GO:0000723 ... Q9H611 39417423
    970395 9fb9:A (2.19) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 N/A
    970396 9fb9:B (2.19) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 N/A
    970397 9fb9:C (2.19) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 N/A
    970398 9fb9:D (2.19) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 N/A
    970399 9fb9:E (2.19) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 N/A
    970400 9fb9:F (2.19) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).