SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    971001 9ffz:D (3.3) BS02 ABU N/A GO:0004888 ... P14867 N/A
    971002 9ffz:E (3.3) BS01 ABU N/A GO:0004888 ... P28472 N/A
    971003 9fg0:A (3.6) BS01 ABU N/A GO:0004888 ... P14867 N/A
    971004 9fg0:B (3.6) BS01 ABU N/A GO:0004888 ... P28472 N/A
    971005 9fg0:C (3.6) BS01 MAN N/A GO:0004888 ... P18507 N/A
    971006 9fg0:D (3.6) BS01 MAN N/A GO:0004888 ... P14867 N/A
    971007 9fg0:D (3.6) BS02 ABU N/A GO:0004888 ... P14867 N/A
    971008 9fg1:B (3.1) BS01 ABU N/A GO:0004888 ... P28472 N/A
    971009 9fg1:C (3.1) BS01 MAN N/A GO:0004888 ... P18507 N/A
    971010 9fg1:C (3.1) BS02 D3D N/A GO:0004888 ... P18507 N/A
    971011 9fg1:D (3.1) BS01 MAN N/A GO:0004888 ... P14867 N/A
    971012 9fg1:D (3.1) BS02 D3D N/A GO:0004888 ... P14867 N/A
    971013 9fg1:D (3.1) BS03 D3D N/A GO:0004888 ... P14867 N/A
    971014 9fg1:D (3.1) BS04 ABU N/A GO:0004888 ... P14867 N/A
    971015 9fg1:E (3.1) BS01 D3D N/A GO:0004888 ... P28472 N/A
    971016 9fg1:E (3.1) BS02 ABU N/A GO:0004888 ... P28472 N/A
    971017 9fg2:A (3.0) BS01 D3D N/A GO:0004888 ... P14867 N/A
    971018 9fg2:A (3.0) BS02 ABU N/A GO:0004888 ... P14867 N/A
    971019 9fg2:B (3.0) BS01 D3D N/A GO:0004888 ... P28472 N/A
    971020 9fg2:B (3.0) BS02 ABU N/A GO:0004888 ... P28472 N/A
    971021 9fg2:C (3.0) BS01 MAN N/A GO:0004888 ... P18507 N/A
    971022 9fg2:D (3.0) BS01 MAN N/A GO:0004888 ... P14867 N/A
    971023 9fg2:D (3.0) BS02 D3D N/A GO:0004888 ... P14867 N/A
    971024 9fg2:D (3.0) BS03 ABU N/A GO:0004888 ... P14867 N/A
    971025 9fg2:E (3.0) BS01 ABU N/A GO:0004888 ... P28472 N/A
    971026 9fg3:A (3.1) BS01 D3D N/A GO:0004888 ... P14867 N/A
    971027 9fg3:A (3.1) BS02 ABU N/A GO:0004888 ... P14867 N/A
    971028 9fg3:B (3.1) BS01 D3D N/A GO:0004888 ... P28472 N/A
    971029 9fg3:B (3.1) BS02 ABU N/A GO:0004888 ... P28472 N/A
    971030 9fg3:C (3.1) BS01 MAN N/A GO:0004888 ... P18507 N/A
    971031 9fg3:D (3.1) BS01 MAN N/A GO:0004888 ... P14867 N/A
    971032 9fg3:D (3.1) BS02 ABU N/A GO:0004888 ... P14867 N/A
    971033 9fg3:D (3.1) BS03 D3D N/A GO:0004888 ... P14867 N/A
    971034 9fg3:E (3.1) BS01 ABU N/A GO:0004888 ... P28472 N/A
    971035 9fg4:A (3.4) BS01 PIO N/A GO:0004888 ... P14867 N/A
    971036 9fg4:D (3.4) BS01 MAN N/A GO:0004888 ... P14867 N/A
    971037 9fg4:D (3.4) BS02 PIO N/A GO:0004888 ... P14867 N/A
    971038 9fg5:A (3.2) BS01 PIO N/A GO:0004888 ... P14867 N/A
    971039 9fg5:A (3.2) BS02 ABU N/A GO:0004888 ... P14867 N/A
    971040 9fg5:B (3.2) BS01 ABU N/A GO:0004888 ... P28472 N/A
    971041 9fg5:C (3.2) BS01 ABU N/A GO:0004888 ... P28472 N/A
    971042 9fg5:D (3.2) BS01 ABU N/A GO:0004888 ... P14867 N/A
    971043 9fg5:D (3.2) BS02 PIO N/A GO:0004888 ... P14867 N/A
    971044 9fg6:A (3.3) BS01 PIO N/A GO:0004888 ... P14867 N/A
    971045 9fg6:B (3.3) BS01 ABU N/A GO:0004888 ... P28472 N/A
    971046 9fg6:C (3.3) BS01 ABU N/A GO:0004888 ... P28472 N/A
    971047 9fg6:C (3.3) BS02 HSM N/A GO:0004888 ... P28472 N/A
    971048 9fg6:D (3.3) BS01 PIO N/A GO:0004888 ... P14867 N/A
    971049 9fg6:E (3.3) BS01 HSM N/A GO:0004888 ... P28472 N/A
    971050 9fg7:A (2.7) BS01 PIO N/A GO:0004888 ... P14867 N/A
    971051 9fg7:A (2.7) BS02 ABU N/A GO:0004888 ... P14867 N/A
    971052 9fg7:B (2.7) BS01 ABU N/A GO:0004888 ... P28472 N/A
    971053 9fg7:C (2.7) BS01 MAN N/A GO:0004888 ... P18507 N/A
    971054 9fg7:D (2.7) BS01 MAN N/A GO:0004888 ... P14867 N/A
    971055 9fg7:D (2.7) BS02 PIO N/A GO:0004888 ... P14867 N/A
    971056 9fg7:D (2.7) BS03 ABU N/A GO:0004888 ... P14867 N/A
    971057 9fg7:E (2.7) BS01 ABU N/A GO:0004888 ... P28472 N/A
    971058 9fg8:A (2.9) BS01 PIO N/A GO:0004888 ... P14867 N/A
    971059 9fg8:A (2.9) BS02 ABU N/A GO:0004888 ... P14867 N/A
    971060 9fg8:B (2.9) BS01 ABU N/A GO:0004888 ... P28472 N/A
    971061 9fg8:C (2.9) BS01 MAN N/A GO:0004888 ... P18507 N/A
    971062 9fg8:D (2.9) BS01 MAN N/A GO:0004888 ... P14867 N/A
    971063 9fg8:D (2.9) BS02 PIO N/A GO:0004888 ... P14867 N/A
    971064 9fg8:D (2.9) BS03 ABU N/A GO:0004888 ... P14867 N/A
    971065 9fg8:E (2.9) BS01 ABU N/A GO:0004888 ... P28472 N/A
    971066 9fg9:A (2.7) BS01 PIO N/A GO:0004888 ... P14867 N/A
    971067 9fg9:A (2.7) BS02 LBN N/A GO:0004888 ... P14867 N/A
    971068 9fg9:A (2.7) BS03 ABU N/A GO:0004888 ... P14867 N/A
    971069 9fg9:A (2.7) BS04 V8D N/A GO:0004888 ... P14867 N/A
    971070 9fg9:B (2.7) BS01 ABU N/A GO:0004888 ... P28472 N/A
    971071 9fg9:B (2.7) BS02 V8D N/A GO:0004888 ... P28472 N/A
    971072 9fg9:C (2.7) BS01 MAN N/A GO:0004888 ... P18507 N/A
    971073 9fg9:C (2.7) BS02 MAN N/A GO:0004888 ... P18507 N/A
    971074 9fg9:D (2.7) BS01 MAN N/A GO:0004888 ... P14867 N/A
    971075 9fg9:D (2.7) BS02 PIO N/A GO:0004888 ... P14867 N/A
    971076 9fg9:D (2.7) BS03 LBN N/A GO:0004888 ... P14867 N/A
    971077 9fg9:D (2.7) BS04 ABU N/A GO:0004888 ... P14867 N/A
    971078 9fg9:D (2.7) BS05 V8D N/A GO:0004888 ... P14867 N/A
    971079 9fg9:E (2.7) BS01 ABU N/A GO:0004888 ... P28472 N/A
    971080 9fg9:E (2.7) BS02 V8D N/A GO:0004888 ... P28472 N/A
    971081 9fga:A (3.3) BS01 PIO N/A GO:0004888 ... P14867 N/A
    971082 9fga:C (3.3) BS01 MAN N/A GO:0004888 ... P18507 N/A
    971083 9fga:D (3.3) BS01 MAN N/A GO:0004888 ... P14867 N/A
    971084 9fga:D (3.3) BS02 PIO N/A GO:0004888 ... P14867 N/A
    971085 9fgb:A (3.8) BS01 PIO N/A GO:0004888 ... P14867 N/A
    971086 9fgb:C (3.8) BS01 MAN N/A GO:0004888 ... P18507 N/A
    971087 9fgb:D (3.8) BS01 MAN N/A GO:0004888 ... P14867 N/A
    971088 9fgc:C (3.4) BS01 MAN N/A GO:0004888 ... P18507 N/A
    971089 9fgc:D (3.4) BS01 PIO N/A GO:0004888 ... P14867 N/A
    971090 9fgd:C (3.3) BS01 MAN N/A GO:0004888 ... P18507 N/A
    971091 9fgd:C (3.3) BS02 MAN N/A GO:0004888 ... P18507 N/A
    971092 9fge:A (1.6) BS01 FAD N/A GO:0003824 ... A0ACD6BAI9 39781101
    971093 9fge:A (1.6) BS02 V55 N/A GO:0003824 ... A0ACD6BAI9 39781101
    971094 9fge:B (1.6) BS01 FAD N/A GO:0003824 ... A0ACD6BAI9 39781101
    971095 9fge:B (1.6) BS02 V55 N/A GO:0003824 ... A0ACD6BAI9 39781101
    971096 9fgf:A (2.9) BS01 MAN N/A GO:0004888 ... P14867 N/A
    971097 9fgf:A (2.9) BS02 PIO N/A GO:0004888 ... P14867 N/A
    971098 9fgf:C (2.9) BS01 MAN N/A GO:0004888 ... P18507 N/A
    971099 9fgf:C (2.9) BS02 MAN N/A GO:0004888 ... P18507 N/A
    971100 9fgf:D (2.9) BS01 PIO N/A GO:0004888 ... P14867 N/A
    971101 9fgg:A (2.6) BS01 PIO N/A GO:0004888 ... P14867 N/A
    971102 9fgg:A (2.6) BS02 ABU N/A GO:0004888 ... P14867 N/A
    971103 9fgg:A (2.6) BS03 V8D N/A GO:0004888 ... P14867 N/A
    971104 9fgg:B (2.6) BS01 ABU N/A GO:0004888 ... P28472 N/A
    971105 9fgg:B (2.6) BS02 V8D N/A GO:0004888 ... P28472 N/A
    971106 9fgg:C (2.6) BS01 MAN N/A GO:0004888 ... P18507 N/A
    971107 9fgg:D (2.6) BS01 PIO N/A GO:0004888 ... P14867 N/A
    971108 9fgg:D (2.6) BS02 ABU N/A GO:0004888 ... P14867 N/A
    971109 9fgg:D (2.6) BS03 V8D N/A GO:0004888 ... P14867 N/A
    971110 9fgg:E (2.6) BS01 ABU N/A GO:0004888 ... P28472 N/A
    971111 9fgg:E (2.6) BS02 V8D N/A GO:0004888 ... P28472 N/A
    971112 9fgh:A (3.0) BS01 PIO N/A GO:0004888 ... P14867 N/A
    971113 9fgh:A (3.0) BS02 ABU N/A GO:0004888 ... P14867 N/A
    971114 9fgh:B (3.0) BS01 ABU N/A GO:0004888 ... P28472 N/A
    971115 9fgh:C (3.0) BS01 MAN N/A GO:0004888 ... P18507 N/A
    971116 9fgh:C (3.0) BS02 MAN N/A GO:0004888 ... P18507 N/A
    971117 9fgh:D (3.0) BS01 PIO N/A GO:0004888 ... P14867 N/A
    971118 9fgh:D (3.0) BS02 ABU N/A GO:0004888 ... P14867 N/A
    971119 9fgh:E (3.0) BS01 ABU N/A GO:0004888 ... P28472 N/A
    971120 9fgn:A (2.64) BS01 A1ICH N/A GO:0005198 ... P21404 39292620
    971121 9fgo:A (1.43) BS01 ZN N/A GO:0000166 ... E5L2F2 N/A
    971122 9fgp:A (1.49) BS01 ZN ? N/A Q6V702 N/A
    971123 9fgp:B (1.49) BS01 ZN ? N/A Q6V702 N/A
    971124 9fgq:A (2.5) BS01 dna N/A GO:0000786 ... P68431 39143240
    971125 9fgq:A (2.5) BS02 dna N/A GO:0000786 ... P68431 39143240
    971126 9fgq:B (2.5) BS01 dna N/A GO:0000781 ... P62805 39143240
    971127 9fgq:B (2.5) BS02 dna N/A GO:0000781 ... P62805 39143240
    971128 9fgq:C (2.5) BS01 peptide N/A GO:0000786 ... Q6FI13 39143240
    971129 9fgq:C (2.5) BS02 dna N/A GO:0000786 ... Q6FI13 39143240
    971130 9fgq:C (2.5) BS03 dna N/A GO:0000786 ... Q6FI13 39143240
    971131 9fgq:D (2.5) BS01 peptide N/A GO:0000781 ... P33778 39143240
    971132 9fgq:D (2.5) BS02 dna N/A GO:0000781 ... P33778 39143240
    971133 9fgq:D (2.5) BS03 dna N/A GO:0000781 ... P33778 39143240
    971134 9fgq:E (2.5) BS01 dna N/A GO:0000786 ... P68431 39143240
    971135 9fgq:E (2.5) BS02 dna N/A GO:0000786 ... P68431 39143240
    971136 9fgq:F (2.5) BS01 dna N/A GO:0000781 ... P62805 39143240
    971137 9fgq:F (2.5) BS02 dna N/A GO:0000781 ... P62805 39143240
    971138 9fgq:G (2.5) BS01 peptide N/A GO:0000786 ... Q6FI13 39143240
    971139 9fgq:G (2.5) BS02 dna N/A GO:0000786 ... Q6FI13 39143240
    971140 9fgq:G (2.5) BS03 dna N/A GO:0000786 ... Q6FI13 39143240
    971141 9fgq:H (2.5) BS01 peptide N/A GO:0000781 ... P33778 39143240
    971142 9fgq:H (2.5) BS02 dna N/A GO:0000781 ... P33778 39143240
    971143 9fgq:H (2.5) BS03 dna N/A GO:0000781 ... P33778 39143240
    971144 9fh7:A (1.529) BS01 FMN N/A GO:0003959 ... Q03558 39444529
    971145 9fh7:B (1.529) BS01 FMN N/A GO:0003959 ... Q03558 39444529
    971146 9fh9:A (2.5) BS01 dna N/A GO:0000786 ... P68431 39143240
    971147 9fh9:A (2.5) BS02 dna N/A GO:0000786 ... P68431 39143240
    971148 9fh9:B (2.5) BS01 dna N/A GO:0000781 ... P62805 39143240
    971149 9fh9:B (2.5) BS02 dna N/A GO:0000781 ... P62805 39143240
    971150 9fh9:C (2.5) BS01 peptide N/A GO:0000786 ... Q7L7L0 39143240
    971151 9fh9:C (2.5) BS02 dna N/A GO:0000786 ... Q7L7L0 39143240
    971152 9fh9:C (2.5) BS03 dna N/A GO:0000786 ... Q7L7L0 39143240
    971153 9fh9:D (2.5) BS01 peptide N/A GO:0000786 ... P02281 39143240
    971154 9fh9:D (2.5) BS02 dna N/A GO:0000786 ... P02281 39143240
    971155 9fh9:D (2.5) BS03 dna N/A GO:0000786 ... P02281 39143240
    971156 9fh9:E (2.5) BS01 dna N/A GO:0000786 ... P68431 39143240
    971157 9fh9:E (2.5) BS02 dna N/A GO:0000786 ... P68431 39143240
    971158 9fh9:F (2.5) BS01 dna N/A GO:0000781 ... P62805 39143240
    971159 9fh9:F (2.5) BS02 dna N/A GO:0000781 ... P62805 39143240
    971160 9fh9:G (2.5) BS01 peptide N/A GO:0000786 ... Q7L7L0 39143240
    971161 9fh9:G (2.5) BS02 dna N/A GO:0000786 ... Q7L7L0 39143240
    971162 9fh9:G (2.5) BS03 dna N/A GO:0000786 ... Q7L7L0 39143240
    971163 9fh9:H (2.5) BS01 peptide N/A GO:0000786 ... P02281 39143240
    971164 9fh9:H (2.5) BS02 dna N/A GO:0000786 ... P02281 39143240
    971165 9fh9:H (2.5) BS03 dna N/A GO:0000786 ... P02281 39143240
    971166 9fha:A (1.7) BS01 A1IC9 N/A GO:0001523 ... P02766 N/A
    971167 9fha:B (1.7) BS01 A1IC9 N/A GO:0001523 ... P02766 N/A
    971168 9fhb:A (3.87) BS01 HEM N/A GO:0004601 ... P69905 39738064
    971169 9fhb:B (3.87) BS01 HEM N/A GO:0004601 ... P68871 39738064
    971170 9fhb:D (3.87) BS01 CA N/A GO:0016020 ... Q86VB7 39738064
    971171 9fhb:D (3.87) BS02 CA N/A GO:0016020 ... Q86VB7 39738064
    971172 9fhc:A (2.2) BS01 MIY N/A GO:0005515 ... P31224 41298458
    971173 9fhd:A (1.845) BS01 A1ICK N/A GO:0004454 ... P50053 39179180
    971174 9fhd:B (1.845) BS01 A1ICK N/A GO:0004454 ... P50053 39179180
    971175 9fhe:A (2.313) BS01 A1ICK N/A GO:0004454 ... P50053 39179180
    971176 9fhe:B (2.313) BS01 A1ICK N/A GO:0004454 ... P50053 39179180
    971177 9fhl:3 (2.5) BS01 rna N/A GO:0001682 ... P55858 39753558
    971178 9fhl:A (2.5) BS01 rna N/A GO:0003735 ... Q9UXD4 39753558
    971179 9fhl:B (2.5) BS01 rna N/A GO:0000028 ... P95993 39753558
    971180 9fhl:C (2.5) BS01 rna N/A GO:0005737 ... Q980V0 39753558
    971181 9fhl:C (2.5) BS02 ZN N/A GO:0005737 ... Q980V0 39753558
    971182 9fhl:C (2.5) BS03 ZN N/A GO:0005737 ... Q980V0 39753558
    971183 9fhl:D (2.5) BS01 rna N/A GO:0003723 ... P95987 39753558
    971184 9fhl:E (2.5) BS01 rna N/A GO:0003723 ... Q9UX94 39753558
    971185 9fhl:F (2.5) BS01 rna N/A GO:0003723 ... Q9UX87 39753558
    971186 9fhl:F (2.5) BS02 ZN N/A GO:0003723 ... Q9UX87 39753558
    971187 9fhl:G (2.5) BS01 rna N/A GO:0003735 ... Q980A6 39753558
    971188 9fhl:H (2.5) BS01 rna N/A GO:0003723 ... P35026 39753558
    971189 9fhl:I (2.5) BS01 rna N/A GO:0003735 ... Q9UX92 39753558
    971190 9fhl:J (2.5) BS01 rna N/A GO:0002181 ... Q980W3 39753558
    971191 9fhl:K (2.5) BS01 rna N/A GO:0000462 ... P95992 39753558
    971192 9fhl:L (2.5) BS01 rna N/A GO:0000049 ... P35027 39753558
    971193 9fhl:M (2.5) BS01 rna N/A GO:0003735 ... P95988 39753558
    971194 9fhl:N (2.5) BS01 rna N/A GO:0003735 ... P39573 39753558
    971195 9fhl:O (2.5) BS01 rna N/A GO:0003676 ... P95986 39753558
    971196 9fhl:P (2.5) BS01 rna N/A GO:0002181 ... Q97ZQ5 39753558
    971197 9fhl:P (2.5) BS02 ZN N/A GO:0002181 ... Q97ZQ5 39753558
    971198 9fhl:Q (2.5) BS01 rna N/A GO:0000462 ... Q980A8 39753558
    971199 9fhl:R (2.5) BS01 rna N/A GO:0003735 ... Q9UX98 39753558
    971200 9fhl:R (2.5) BS02 ZN N/A GO:0003735 ... Q9UX98 39753558

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).