SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4848 4849 4850 4851 4852 4853 4854 4855 4856 4857 4858 4859 4860 4861 4862 4863 4864 4865 4866 4867 4868 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    971401 9fia:BK (3.29) BS01 rna N/A N/A S8EVV8 39690155
    971402 9fia:BK (3.29) BS02 rna N/A N/A S8EVV8 39690155
    971403 9fia:BK (3.29) BS03 rna N/A N/A S8EVV8 39690155
    971404 9fia:BL (3.29) BS01 rna N/A GO:0003735 ... A0A125YU95 39690155
    971405 9fia:BL (3.29) BS02 rna N/A GO:0003735 ... A0A125YU95 39690155
    971406 9fia:BL (3.29) BS03 rna N/A GO:0003735 ... A0A125YU95 39690155
    971407 9fia:BO (3.29) BS01 rna N/A GO:0003735 ... A0A125YGX6 39690155
    971408 9fia:BO (3.29) BS02 rna N/A GO:0003735 ... A0A125YGX6 39690155
    971409 9fia:BO (3.29) BS03 rna N/A GO:0003735 ... A0A125YGX6 39690155
    971410 9fia:BO (3.29) BS04 rna N/A GO:0003735 ... A0A125YGX6 39690155
    971411 9fia:BO (3.29) BS05 rna N/A GO:0003735 ... A0A125YGX6 39690155
    971412 9fia:BQ (3.29) BS01 peptide N/A N/A S8GKJ3 39690155
    971413 9fia:BQ (3.29) BS02 rna N/A N/A S8GKJ3 39690155
    971414 9fia:BQ (3.29) BS03 rna N/A N/A S8GKJ3 39690155
    971415 9fia:BQ (3.29) BS04 rna N/A N/A S8GKJ3 39690155
    971416 9fia:BQ (3.29) BS05 rna N/A N/A S8GKJ3 39690155
    971417 9fia:BQ (3.29) BS06 rna N/A N/A S8GKJ3 39690155
    971418 9fia:BQ (3.29) BS07 rna N/A N/A S8GKJ3 39690155
    971419 9fia:BQ (3.29) BS08 rna N/A N/A S8GKJ3 39690155
    971420 9fia:BS (3.29) BS01 rna N/A N/A S8G0I7 39690155
    971421 9fia:BT (3.29) BS01 rna N/A N/A A0A0F7VBJ0 39690155
    971422 9fia:BT (3.29) BS02 rna N/A N/A A0A0F7VBJ0 39690155
    971423 9fia:BV (3.29) BS01 rna N/A N/A S8F351 39690155
    971424 9fia:BV (3.29) BS02 rna N/A N/A S8F351 39690155
    971425 9fia:BV (3.29) BS03 rna N/A N/A S8F351 39690155
    971426 9fia:BW (3.29) BS01 rna N/A N/A S8F063 39690155
    971427 9fia:BW (3.29) BS02 rna N/A N/A S8F063 39690155
    971428 9fia:Bc (3.29) BS01 peptide N/A GO:0003860 ... A0A125YR83 39690155
    971429 9fia:Bg (3.29) BS01 rna N/A N/A S8ETC4 39690155
    971430 9fia:Bg (3.29) BS02 rna N/A N/A S8ETC4 39690155
    971431 9fia:Bh (3.29) BS01 rna N/A GO:0003735 ... A0A125YN27 39690155
    971432 9fia:Bh (3.29) BS02 rna N/A GO:0003735 ... A0A125YN27 39690155
    971433 9fia:Bh (3.29) BS03 rna N/A GO:0003735 ... A0A125YN27 39690155
    971434 9fia:Bi (3.29) BS01 rna N/A N/A S8GJU2 39690155
    971435 9fia:Bk (3.29) BS01 rna N/A N/A S8G5S9 39690155
    971436 9fia:Bk (3.29) BS02 rna N/A N/A S8G5S9 39690155
    971437 9fia:Bk (3.29) BS03 rna N/A N/A S8G5S9 39690155
    971438 9fia:Bk (3.29) BS04 rna N/A N/A S8G5S9 39690155
    971439 9fia:Bk (3.29) BS05 rna N/A N/A S8G5S9 39690155
    971440 9fia:Bl (3.29) BS01 peptide N/A GO:0003735 ... S8EUD1 39690155
    971441 9fia:Bl (3.29) BS02 rna N/A GO:0003735 ... S8EUD1 39690155
    971442 9fia:Bl (3.29) BS03 rna N/A GO:0003735 ... S8EUD1 39690155
    971443 9fia:Bl (3.29) BS04 rna N/A GO:0003735 ... S8EUD1 39690155
    971444 9fia:Bl (3.29) BS05 rna N/A GO:0003735 ... S8EUD1 39690155
    971445 9fia:Bl (3.29) BS06 rna N/A GO:0003735 ... S8EUD1 39690155
    971446 9fia:Bl (3.29) BS07 rna N/A GO:0003735 ... S8EUD1 39690155
    971447 9fia:Bl (3.29) BS08 rna N/A GO:0003735 ... S8EUD1 39690155
    971448 9fia:HJ (3.29) BS01 rna N/A GO:0003723 ... S8F5G8 39690155
    971449 9fia:HJ (3.29) BS02 rna N/A GO:0003723 ... S8F5G8 39690155
    971450 9fia:HJ (3.29) BS03 rna N/A GO:0003723 ... S8F5G8 39690155
    971451 9fia:HJ (3.29) BS04 rna N/A GO:0003723 ... S8F5G8 39690155
    971452 9fia:HJ (3.29) BS05 rna N/A GO:0003723 ... S8F5G8 39690155
    971453 9fia:HJ (3.29) BS06 rna N/A GO:0003723 ... S8F5G8 39690155
    971454 9fia:HJ (3.29) BS07 rna N/A GO:0003723 ... S8F5G8 39690155
    971455 9fia:HS (3.29) BS01 rna N/A N/A A0A125YXT1 39690155
    971456 9fia:HS (3.29) BS02 rna N/A N/A A0A125YXT1 39690155
    971457 9fia:HS (3.29) BS03 rna N/A N/A A0A125YXT1 39690155
    971458 9fib:D (2.3) BS01 rna N/A GO:0000028 ... P0A7V8 40075065
    971459 9fib:E (2.3) BS01 rna N/A GO:0000028 ... P0A7W1 40075065
    971460 9fib:F (2.3) BS01 rna N/A GO:0002181 ... P02358 40075065
    971461 9fib:H (2.3) BS01 rna N/A GO:0000028 ... P0A7W7 40075065
    971462 9fib:I (2.3) BS01 rna N/A GO:0003676 ... P69222 40075065
    971463 9fib:I (2.3) BS02 rna N/A GO:0003676 ... P69222 40075065
    971464 9fib:J (2.3) BS01 rna N/A GO:0003743 ... P0A707 40075065
    971465 9fib:J (2.3) BS02 rna N/A GO:0003743 ... P0A707 40075065
    971466 9fib:K (2.3) BS01 rna N/A GO:0002181 ... P0A7R9 40075065
    971467 9fib:K (2.3) BS02 A1IC4 N/A GO:0002181 ... P0A7R9 40075065
    971468 9fib:L (2.3) BS01 rna N/A GO:0000049 ... P0A7S3 40075065
    971469 9fib:O (2.3) BS01 rna N/A GO:0000028 ... P0ADZ4 40075065
    971470 9fib:P (2.3) BS01 rna N/A GO:0000028 ... P0A7T3 40075065
    971471 9fib:Q (2.3) BS01 rna N/A GO:0000028 ... P0AG63 40075065
    971472 9fib:R (2.3) BS01 rna N/A GO:0002181 ... P0A7T7 40075065
    971473 9fib:T (2.3) BS01 rna N/A GO:0000028 ... P0A7U7 40075065
    971474 9fib:U (2.3) BS01 rna N/A GO:0000028 ... P68679 40075065
    971475 9fid:A (2.4) BS01 CA N/A GO:0004252 ... P09958 40897699
    971476 9fid:A (2.4) BS02 CA N/A GO:0004252 ... P09958 40897699
    971477 9fid:B (2.4) BS01 CA N/A GO:0004252 ... P09958 40897699
    971478 9fid:B (2.4) BS02 CA N/A GO:0004252 ... P09958 40897699
    971479 9fid:C (2.4) BS01 CA N/A GO:0004252 ... P09958 40897699
    971480 9fid:C (2.4) BS02 CA N/A GO:0004252 ... P09958 40897699
    971481 9fie:A (2.0) BS01 CA N/A GO:0004252 ... P09958 40897699
    971482 9fie:A (2.0) BS02 CA N/A GO:0004252 ... P09958 40897699
    971483 9fie:A (2.0) BS03 CA N/A GO:0004252 ... P09958 40897699
    971484 9fie:C (2.0) BS01 CA N/A GO:0004252 ... P09958 40897699
    971485 9fie:C (2.0) BS02 CA N/A GO:0004252 ... P09958 40897699
    971486 9fie:C (2.0) BS03 CA N/A GO:0004252 ... P09958 40897699
    971487 9fie:E (2.0) BS01 CA N/A GO:0004252 ... P09958 40897699
    971488 9fie:E (2.0) BS02 CA N/A GO:0004252 ... P09958 40897699
    971489 9fie:E (2.0) BS03 CA N/A GO:0004252 ... P09958 40897699
    971490 9fie:G (2.0) BS01 CA N/A GO:0004252 ... P09958 40897699
    971491 9fie:G (2.0) BS02 CA N/A GO:0004252 ... P09958 40897699
    971492 9fie:G (2.0) BS03 CA N/A GO:0004252 ... P09958 40897699
    971493 9fif:A (1.77) BS01 FES N/A GO:0003954 ... O66842 38960077
    971494 9fif:B (1.77) BS01 SF4 N/A GO:0008137 ... O66841 38960077
    971495 9fif:B (1.77) BS02 FMN N/A GO:0008137 ... O66841 38960077
    971496 9fif:B (1.77) BS03 NAI N/A GO:0008137 ... O66841 38960077
    971497 9fif:C (1.77) BS01 FES N/A GO:0003954 ... O66842 38960077
    971498 9fif:D (1.77) BS01 SF4 N/A GO:0008137 ... O66841 38960077
    971499 9fif:D (1.77) BS02 FMN N/A GO:0008137 ... O66841 38960077
    971500 9fih:A (2.08) BS01 FES N/A GO:0003954 ... O66842 38960077
    971501 9fih:B (2.08) BS01 SF4 N/A GO:0008137 ... O66841 38960077
    971502 9fih:B (2.08) BS02 FNR N/A GO:0008137 ... O66841 38960077
    971503 9fih:B (2.08) BS03 NAI N/A GO:0008137 ... O66841 38960077
    971504 9fih:C (2.08) BS01 FES N/A GO:0003954 ... O66842 38960077
    971505 9fih:D (2.08) BS01 SF4 N/A GO:0008137 ... O66841 38960077
    971506 9fih:D (2.08) BS02 FNR N/A GO:0008137 ... O66841 38960077
    971507 9fih:D (2.08) BS03 NAI N/A GO:0008137 ... O66841 38960077
    971508 9fii:A (2.5) BS01 FES N/A GO:0003954 ... O66842 38960077
    971509 9fii:B (2.5) BS01 SF4 N/A GO:0008137 ... O66841 38960077
    971510 9fii:B (2.5) BS02 FMN N/A GO:0008137 ... O66841 38960077
    971511 9fii:C (2.5) BS01 FES N/A GO:0003954 ... O66842 38960077
    971512 9fii:D (2.5) BS01 SF4 N/A GO:0008137 ... O66841 38960077
    971513 9fii:D (2.5) BS02 FMN N/A GO:0008137 ... O66841 38960077
    971514 9fij:A (2.35) BS01 FES N/A GO:0003954 ... O66842 38960077
    971515 9fij:B (2.35) BS01 SF4 N/A GO:0008137 ... O66841 38960077
    971516 9fij:B (2.35) BS02 FNR N/A GO:0008137 ... O66841 38960077
    971517 9fij:C (2.35) BS01 FES N/A GO:0003954 ... O66842 38960077
    971518 9fij:D (2.35) BS01 SF4 N/A GO:0008137 ... O66841 38960077
    971519 9fij:D (2.35) BS02 FNR N/A GO:0008137 ... O66841 38960077
    971520 9fil:A (2.54) BS01 FES N/A GO:0003954 ... O66842 38960077
    971521 9fil:B (2.54) BS01 SF4 N/A GO:0008137 ... O66841 38960077
    971522 9fil:B (2.54) BS02 FNR N/A GO:0008137 ... O66841 38960077
    971523 9fil:B (2.54) BS03 NAD N/A GO:0008137 ... O66841 38960077
    971524 9fil:C (2.54) BS01 FES N/A GO:0003954 ... O66842 38960077
    971525 9fil:D (2.54) BS01 SF4 N/A GO:0008137 ... O66841 38960077
    971526 9fil:D (2.54) BS02 FNR N/A GO:0008137 ... O66841 38960077
    971527 9fil:D (2.54) BS03 NAD N/A GO:0008137 ... O66841 38960077
    971528 9fim:A (1.6) BS01 A1IC3 N/A GO:0003676 ... Q9Y5N5 N/A
    971529 9fio:A (2.6) BS01 R4D N/A GO:0004843 ... Q93009 39441669
    971530 9fio:B (2.6) BS01 R4D N/A GO:0004843 ... Q93009 39441669
    971531 9fip:A (3.06) BS01 A1ICU N/A GO:0004843 ... Q93009 39441669
    971532 9fip:B (3.06) BS01 A1ICU N/A GO:0004843 ... Q93009 39441669
    971533 9fiq:A (2.86) BS01 A1ICV N/A GO:0004843 ... Q93009 39441669
    971534 9fiq:A (2.86) BS02 A1ICV N/A GO:0004843 ... Q93009 39441669
    971535 9fiq:B (2.86) BS01 A1ICV N/A GO:0004843 ... Q93009 39441669
    971536 9fiq:B (2.86) BS02 A1ICV N/A GO:0004843 ... Q93009 39441669
    971537 9fir:A (2.76) BS01 A1ICS N/A GO:0004843 ... Q93009 39441669
    971538 9fir:B (2.76) BS01 A1ICS N/A GO:0004843 ... Q93009 39441669
    971539 9fis:A (2.77) BS01 A1ICW N/A GO:0004843 ... Q93009 39441669
    971540 9fis:B (2.77) BS01 A1ICW N/A GO:0004843 ... Q93009 39441669
    971541 9fit:A (2.7) BS01 A1ICT N/A GO:0004843 ... Q93009 39441669
    971542 9fit:B (2.7) BS01 A1ICT N/A GO:0004843 ... Q93009 39441669
    971543 9fiu:A (3.37) BS01 A1ICX N/A GO:0004843 ... Q93009 39441669
    971544 9fiu:B (3.37) BS01 A1ICX N/A GO:0004843 ... Q93009 39441669
    971545 9fiv:A (2.7) BS01 A1ICO N/A GO:0004843 ... Q93009 39441669
    971546 9fiv:B (2.7) BS01 A1ICO N/A GO:0004843 ... Q93009 39441669
    971547 9fiw:M (2.82) BS01 peptide N/A GO:0006886 ... P84092 N/A
    971548 9fix:M (2.78) BS01 peptide N/A GO:0006886 ... P84092 N/A
    971549 9fiy:M (2.88) BS01 peptide N/A GO:0006886 ... P84092 N/A
    971550 9fj1:A (3.8) BS01 A1IDM N/A GO:0003824 ... P04021 39939832
    971551 9fj2:A (2.19) BS01 FE N/A GO:0005506 ... A0A099I6D2 N/A
    971552 9fj2:A (2.19) BS02 FE N/A GO:0005506 ... A0A099I6D2 N/A
    971553 9fj2:A (2.19) BS03 FE N/A GO:0005506 ... A0A099I6D2 N/A
    971554 9fj2:A (2.19) BS04 O N/A GO:0005506 ... A0A099I6D2 N/A
    971555 9fj2:B (2.19) BS01 O N/A GO:0005506 ... A0A099I6D2 N/A
    971556 9fj2:B (2.19) BS02 FE N/A GO:0005506 ... A0A099I6D2 N/A
    971557 9fj2:B (2.19) BS03 FE N/A GO:0005506 ... A0A099I6D2 N/A
    971558 9fj2:B (2.19) BS04 FE N/A GO:0005506 ... A0A099I6D2 N/A
    971559 9fj2:B (2.19) BS05 O N/A GO:0005506 ... A0A099I6D2 N/A
    971560 9fj2:C (2.19) BS01 FE N/A GO:0005506 ... A0A099I6D2 N/A
    971561 9fj2:C (2.19) BS02 FE N/A GO:0005506 ... A0A099I6D2 N/A
    971562 9fj2:C (2.19) BS03 FE N/A GO:0005506 ... A0A099I6D2 N/A
    971563 9fj2:D (2.19) BS01 FE N/A GO:0005506 ... A0A099I6D2 N/A
    971564 9fj2:D (2.19) BS02 FE N/A GO:0005506 ... A0A099I6D2 N/A
    971565 9fj2:D (2.19) BS03 FE N/A GO:0005506 ... A0A099I6D2 N/A
    971566 9fj2:D (2.19) BS04 O N/A GO:0005506 ... A0A099I6D2 N/A
    971567 9fj2:E (2.19) BS01 FE N/A GO:0005506 ... A0A099I6D2 N/A
    971568 9fj2:E (2.19) BS02 FE N/A GO:0005506 ... A0A099I6D2 N/A
    971569 9fj2:E (2.19) BS03 FE N/A GO:0005506 ... A0A099I6D2 N/A
    971570 9fj2:F (2.19) BS01 FE N/A GO:0005506 ... A0A099I6D2 N/A
    971571 9fj2:F (2.19) BS02 FE N/A GO:0005506 ... A0A099I6D2 N/A
    971572 9fj2:F (2.19) BS03 FE N/A GO:0005506 ... A0A099I6D2 N/A
    971573 9fj2:F (2.19) BS04 O N/A GO:0005506 ... A0A099I6D2 N/A
    971574 9fj2:G (2.19) BS01 FE N/A GO:0005506 ... A0A099I6D2 N/A
    971575 9fj2:G (2.19) BS02 FE N/A GO:0005506 ... A0A099I6D2 N/A
    971576 9fj2:G (2.19) BS03 FE N/A GO:0005506 ... A0A099I6D2 N/A
    971577 9fj2:G (2.19) BS04 O N/A GO:0005506 ... A0A099I6D2 N/A
    971578 9fj2:H (2.19) BS01 O N/A GO:0005506 ... A0A099I6D2 N/A
    971579 9fj2:H (2.19) BS02 FE N/A GO:0005506 ... A0A099I6D2 N/A
    971580 9fj2:H (2.19) BS03 FE N/A GO:0005506 ... A0A099I6D2 N/A
    971581 9fj2:H (2.19) BS04 FE N/A GO:0005506 ... A0A099I6D2 N/A
    971582 9fj3:A (1.4) BS01 peptide N/A N/A P0CG48 39268210
    971583 9fj3:D (1.4) BS01 peptide N/A N/A P0CG48 39268210
    971584 9fj4:A (1.54) BS01 peptide N/A N/A P0CG48 39268210
    971585 9fj8:A (2.3) BS01 BMA N/A GO:0009298 ... B0K2C2 N/A
    971586 9fj8:A (2.3) BS02 BMA N/A GO:0009298 ... B0K2C2 N/A
    971587 9fj8:A (2.3) BS03 BMA N/A GO:0009298 ... B0K2C2 N/A
    971588 9fj8:B (2.3) BS01 BMA N/A GO:0009298 ... B0K2C2 N/A
    971589 9fj8:B (2.3) BS02 BMA N/A GO:0009298 ... B0K2C2 N/A
    971590 9fj8:B (2.3) BS03 BMA N/A GO:0009298 ... B0K2C2 N/A
    971591 9fj8:B (2.3) BS04 BMA N/A GO:0009298 ... B0K2C2 N/A
    971592 9fja:A (3.5) BS01 A1ICJ N/A GO:0003824 ... P04021 39939832
    971593 9fjc:1 (2.15) BS01 peptide N/A GO:0005198 ... A0A7T7KAA0 38978565
    971594 9fjc:3 (2.15) BS01 peptide N/A GO:0005198 ... L7UV52 38978565
    971595 9fjl:A (3.1) BS01 ZN N/A N/A A0A0U2WS94 N/A
    971596 9fjm:A (3.65) BS01 peptide N/A GO:0000776 ... P60709 39261469
    971597 9fjm:A (3.65) BS02 ADP N/A GO:0000776 ... P60709 39261469
    971598 9fjm:B (3.65) BS01 peptide N/A GO:0000776 ... P60709 39261469
    971599 9fjm:B (3.65) BS02 peptide N/A GO:0000776 ... P60709 39261469
    971600 9fjm:B (3.65) BS03 ADP N/A GO:0000776 ... P60709 39261469

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).