SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    971801 9fks:k (4.31) BS06 MN N/A GO:0004129 ... A1B3D7 N/A
    971802 9fks:l (4.31) BS01 CUA N/A N/A A1BA41 N/A
    971803 9fks:m (4.31) BS01 ZN N/A GO:0004129 ... A1BA37 N/A
    971804 9fks:m (4.31) BS02 DU0 N/A GO:0004129 ... A1BA37 N/A
    971805 9fku:A (1.9) BS01 peptide N/A N/A O31927 N/A
    971806 9fku:B (1.9) BS01 peptide N/A N/A O31927 N/A
    971807 9fkv:A (1.47) BS01 A1IC8 N/A GO:0003676 ... Q9Y5N5 N/A
    971808 9fkw:A (1.392) BS01 A1IDY N/A GO:0003676 ... Q9Y5N5 N/A
    971809 9fkx:A (2.048) BS01 A1IDT N/A GO:0002225 ... Q16552 39276085
    971810 9fkx:B (2.048) BS01 A1IDT N/A GO:0002225 ... Q16552 39276085
    971811 9fky:A (1.557) BS01 A1IDP N/A GO:0042981 ... Q16548 39291659
    971812 9fky:B (1.557) BS01 A1IDP N/A GO:0042981 ... Q16548 39291659
    971813 9fkz:A (1.684) BS01 A1IDO N/A GO:0042981 ... Q16548 39291659
    971814 9fl0:A (1.94) BS01 A1IDG N/A GO:0042981 ... Q16548 39291659
    971815 9fl0:B (1.94) BS01 A1IDG N/A GO:0042981 ... Q16548 39291659
    971816 9fl2:A (2.64) BS01 FAD N/A GO:0016614 ... N/A 39395808
    971817 9fl2:B (2.64) BS01 FAD N/A GO:0016614 ... N/A 39395808
    971818 9fl2:C (2.64) BS01 FAD N/A GO:0016614 ... N/A 39395808
    971819 9fl2:D (2.64) BS01 FAD N/A GO:0016614 ... N/A 39395808
    971820 9fl3:A (2.068) BS01 A1IDS N/A GO:0002225 ... Q16552 39276085
    971821 9fl3:B (2.068) BS01 A1IDS N/A GO:0002225 ... Q16552 39276085
    971822 9fl4:A (1.7) BS01 A1IC6 N/A GO:0003676 ... Q9Y5N5 N/A
    971823 9fl5:A (1.392) BS01 62X N/A GO:0003676 ... Q9Y5N5 N/A
    971824 9fl6:AAA (1.3) BS01 A1IFR N/A GO:0005515 ... P36639 N/A
    971825 9fl7:A (4.3) BS01 NAD N/A GO:0016491 ... O95831 40578349
    971826 9fl7:A (4.3) BS02 FAD N/A GO:0016491 ... O95831 40578349
    971827 9fl7:B (4.3) BS01 NAD N/A GO:0016491 ... O95831 40578349
    971828 9fl7:B (4.3) BS02 FAD N/A GO:0016491 ... O95831 40578349
    971829 9fl8:B (2.64) BS01 peptide N/A GO:0006402 ... Q92600 39319385
    971830 9fl8:C (2.64) BS01 peptide N/A GO:0006402 ... Q92600 39319385
    971831 9flb:A (2.5) BS01 A1IDB N/A GO:0004672 ... Q8TF76 39503260
    971832 9flc:A (2.18) BS01 A1IDA N/A GO:0004672 ... Q8TF76 39503260
    971833 9flf:A (2.2) BS01 ZN N/A GO:0004089 ... Q16790 39688904
    971834 9flf:A (2.2) BS02 A1IDV N/A GO:0004089 ... Q16790 39688904
    971835 9flf:B (2.2) BS01 ZN N/A GO:0004089 ... Q16790 39688904
    971836 9flf:B (2.2) BS02 A1IDV N/A GO:0004089 ... Q16790 39688904
    971837 9flf:C (2.2) BS01 ZN N/A GO:0004089 ... Q16790 39688904
    971838 9flf:C (2.2) BS02 A1IDV N/A GO:0004089 ... Q16790 39688904
    971839 9flf:D (2.2) BS01 ZN N/A GO:0004089 ... Q16790 39688904
    971840 9flf:D (2.2) BS02 A1IDV N/A GO:0004089 ... Q16790 39688904
    971841 9flh:AA (1.5) BS01 ZN N/A N/A Q8DN78 39722888
    971842 9flh:AA (1.5) BS02 ZN N/A N/A Q8DN78 39722888
    971843 9flh:AA (1.5) BS03 ZN N/A N/A Q8DN78 39722888
    971844 9flh:AA (1.5) BS04 ZN N/A N/A Q8DN78 39722888
    971845 9fli:A (3.2) BS01 CA N/A GO:0015926 ... F8TRX1 N/A
    971846 9fli:B (3.2) BS01 CA N/A GO:0015926 ... F8TRX1 N/A
    971847 9fli:C (3.2) BS01 CA N/A GO:0015926 ... F8TRX1 N/A
    971848 9flj:AA (1.6) BS01 ZN N/A N/A Q8DN78 39722888
    971849 9flj:AA (1.6) BS02 ZN N/A N/A Q8DN78 39722888
    971850 9flj:AA (1.6) BS03 ZN N/A N/A Q8DN78 39722888
    971851 9flk:AA (1.85) BS01 ZN N/A N/A Q8DN78 39722888
    971852 9flk:AA (1.85) BS02 ZN N/A N/A Q8DN78 39722888
    971853 9fll:AA (2.8) BS01 ZN N/A N/A Q8DN78 39722888
    971854 9flm:A (1.5) BS01 ZN N/A N/A Q8DN78 39722888
    971855 9flm:A (1.5) BS02 ZN N/A N/A Q8DN78 39722888
    971856 9fln:A (1.14) BS01 ZN N/A N/A Q8DN78 39722888
    971857 9flo:A (2.9) BS01 A1IDC N/A GO:0004672 ... Q8TF76 39503260
    971858 9flq:A (1.85) BS01 A1IDD N/A GO:0004672 ... Q8TF76 N/A
    971859 9flr:A (1.91) BS01 A1IDE N/A GO:0004672 ... Q8TF76 39503260
    971860 9flt:A (2.4) BS01 A1IDF N/A GO:0004672 ... Q8TF76 39503260
    971861 9flz:A (3.0) BS01 ZN N/A GO:0004022 ... A1B4L3 40592898
    971862 9flz:A (3.0) BS02 ZN N/A GO:0004022 ... A1B4L3 40592898
    971863 9flz:B (3.0) BS01 ZN N/A GO:0004022 ... A1B4L3 40592898
    971864 9flz:B (3.0) BS02 ZN N/A GO:0004022 ... A1B4L3 40592898
    971865 9flz:C (3.0) BS01 ZN N/A GO:0004022 ... A1B4L3 40592898
    971866 9flz:C (3.0) BS02 ZN N/A GO:0004022 ... A1B4L3 40592898
    971867 9flz:D (3.0) BS01 ZN N/A GO:0004022 ... A1B4L3 40592898
    971868 9flz:D (3.0) BS02 ZN N/A GO:0004022 ... A1B4L3 40592898
    971869 9fm3:A (2.59) BS01 dna N/A GO:0001882 ... P52028 39428682
    971870 9fm3:A (2.59) BS02 dna N/A GO:0001882 ... P52028 39428682
    971871 9fm3:A (2.59) BS03 A1IDZ N/A GO:0001882 ... P52028 39428682
    971872 9fm3:A (2.59) BS04 MG N/A GO:0001882 ... P52028 39428682
    971873 9fm3:A (2.59) BS05 DOC N/A GO:0001882 ... P52028 39428682
    971874 9fm5:A (1.597) BS01 peptide N/A GO:0004252 ... A5KB03 39832214
    971875 9fm5:A (1.597) BS02 CA N/A GO:0004252 ... A5KB03 39832214
    971876 9fm5:A (1.597) BS03 CA N/A GO:0004252 ... A5KB03 39832214
    971877 9fm5:A (1.597) BS04 CA N/A GO:0004252 ... A5KB03 39832214
    971878 9fm5:B (1.597) BS01 peptide N/A GO:0004252 ... A5KB03 39832214
    971879 9fm5:B (1.597) BS02 CA N/A GO:0004252 ... A5KB03 39832214
    971880 9fm5:B (1.597) BS03 CA N/A GO:0004252 ... A5KB03 39832214
    971881 9fm5:B (1.597) BS04 CA N/A GO:0004252 ... A5KB03 39832214
    971882 9fm7:A (2.0) BS01 ATR N/A GO:0016491 ... N/A 39781332
    971883 9fma:A (1.76) BS01 ZN N/A GO:0004222 ... Q7MXL5 N/A
    971884 9fmb:B (3.0) BS01 MAN N/A N/A P01880 39582378
    971885 9fmb:B (3.0) BS02 MAN N/A N/A P01880 39582378
    971886 9fmb:C (3.0) BS01 MAN N/A N/A P01880 39582378
    971887 9fmb:D (3.0) BS01 MAN N/A N/A P01880 39582378
    971888 9fmd:1 (3.3) BS01 rna N/A GO:0000398 ... Q9H875 38925148
    971889 9fmd:1 (3.3) BS02 rna N/A GO:0000398 ... Q9H875 38925148
    971890 9fmd:32 (3.3) BS01 rna N/A GO:0000398 ... Q9Y421 38925148
    971891 9fmd:7 (3.3) BS01 ATP N/A GO:0000184 ... P38919 38925148
    971892 9fmd:A (3.3) BS01 rna N/A GO:0000244 ... Q6P2Q9 38925148
    971893 9fmd:A (3.3) BS02 rna N/A GO:0000244 ... Q6P2Q9 38925148
    971894 9fmd:A (3.3) BS03 rna N/A GO:0000244 ... Q6P2Q9 38925148
    971895 9fmd:A (3.3) BS04 rna N/A GO:0000244 ... Q6P2Q9 38925148
    971896 9fmd:A (3.3) BS05 rna N/A GO:0000244 ... Q6P2Q9 38925148
    971897 9fmd:A (3.3) BS06 IHP N/A GO:0000244 ... Q6P2Q9 38925148
    971898 9fmd:C (3.3) BS01 rna N/A GO:0000244 ... Q15029 38925148
    971899 9fmd:C (3.3) BS02 GTP N/A GO:0000244 ... Q15029 38925148
    971900 9fmd:E (3.3) BS01 rna N/A GO:0000244 ... Q96DI7 38925148
    971901 9fmd:L (3.3) BS01 rna N/A GO:0000077 ... Q99459 38925148
    971902 9fmd:L (3.3) BS02 rna N/A GO:0000077 ... Q99459 38925148
    971903 9fmd:L (3.3) BS03 rna N/A GO:0000077 ... Q99459 38925148
    971904 9fmd:M (3.3) BS01 rna N/A GO:0000398 ... O95926 38925148
    971905 9fmd:M (3.3) BS02 rna N/A GO:0000398 ... O95926 38925148
    971906 9fmd:N (3.3) BS01 rna N/A GO:0000398 ... P41223 38925148
    971907 9fmd:N (3.3) BS02 rna N/A GO:0000398 ... P41223 38925148
    971908 9fmd:N (3.3) BS03 ZN N/A GO:0000398 ... P41223 38925148
    971909 9fmd:N (3.3) BS04 ZN N/A GO:0000398 ... P41223 38925148
    971910 9fmd:N (3.3) BS05 ZN N/A GO:0000398 ... P41223 38925148
    971911 9fmd:O (3.3) BS01 rna N/A GO:0000398 ... Q9NW64 38925148
    971912 9fmd:O (3.3) BS02 rna N/A GO:0000398 ... Q9NW64 38925148
    971913 9fmd:O (3.3) BS03 ZN N/A GO:0000398 ... Q9NW64 38925148
    971914 9fmd:O (3.3) BS04 ZN N/A GO:0000398 ... Q9NW64 38925148
    971915 9fmd:O (3.3) BS05 ZN N/A GO:0000398 ... Q9NW64 38925148
    971916 9fmd:P (3.3) BS01 rna N/A GO:0000398 ... Q9P013 38925148
    971917 9fmd:P (3.3) BS02 rna N/A GO:0000398 ... Q9P013 38925148
    971918 9fmd:P (3.3) BS03 rna N/A GO:0000398 ... Q9P013 38925148
    971919 9fmd:R (3.3) BS01 rna N/A GO:0000122 ... Q13573 38925148
    971920 9fmd:R (3.3) BS02 rna N/A GO:0000122 ... Q13573 38925148
    971921 9fmd:SR (3.3) BS01 rna N/A GO:0000398 ... Q9UQ35 38925148
    971922 9fmd:SR (3.3) BS02 rna N/A GO:0000398 ... Q9UQ35 38925148
    971923 9fmd:T (3.3) BS01 rna N/A GO:0000398 ... O43660 38925148
    971924 9fmd:U (3.3) BS01 IHP N/A GO:0000375 ... O95391 38925148
    971925 9fmd:W (3.3) BS01 rna N/A GO:0000398 ... O60508 38925148
    971926 9fmd:W (3.3) BS02 rna N/A GO:0000398 ... O60508 38925148
    971927 9fmd:a (3.3) BS01 rna N/A GO:0000243 ... P62318 38925148
    971928 9fmd:b (3.3) BS01 rna N/A GO:0000244 ... P14678 38925148
    971929 9fmd:c (3.3) BS01 rna N/A GO:0000243 ... P62314 38925148
    971930 9fmd:d (3.3) BS01 rna N/A GO:0000244 ... P62316 38925148
    971931 9fmd:e (3.3) BS01 rna N/A GO:0000244 ... P62304 38925148
    971932 9fmd:f (3.3) BS01 rna N/A GO:0000244 ... P62306 38925148
    971933 9fmd:g (3.3) BS01 rna N/A GO:0000244 ... P62308 38925148
    971934 9fmd:h (3.3) BS01 rna N/A GO:0000243 ... P62318 38925148
    971935 9fmd:i (3.3) BS01 rna N/A GO:0000244 ... P14678 38925148
    971936 9fmd:j (3.3) BS01 rna N/A GO:0000243 ... P62314 38925148
    971937 9fmd:k (3.3) BS01 rna N/A GO:0000244 ... P62316 38925148
    971938 9fmd:l (3.3) BS01 rna N/A GO:0000244 ... P62304 38925148
    971939 9fmd:m (3.3) BS01 rna N/A GO:0000244 ... P62306 38925148
    971940 9fmd:n (3.3) BS01 rna N/A GO:0000244 ... P62308 38925148
    971941 9fmd:o (3.3) BS01 rna N/A GO:0000387 ... P09661 38925148
    971942 9fmd:p (3.3) BS01 rna N/A GO:0000387 ... P08579 38925148
    971943 9fmf:A (2.1) BS01 dna N/A GO:0001882 ... P52028 39428682
    971944 9fmf:A (2.1) BS02 dna N/A GO:0001882 ... P52028 39428682
    971945 9fmf:A (2.1) BS03 MG N/A GO:0001882 ... P52028 39428682
    971946 9fmf:A (2.1) BS04 A1IDW N/A GO:0001882 ... P52028 39428682
    971947 9fmg:A (2.71) BS01 S5Q N/A GO:0016491 ... Q2RW97 N/A
    971948 9fmg:A (2.71) BS02 CLF N/A GO:0016491 ... Q2RW97 N/A
    971949 9fmg:B (2.71) BS01 CLF N/A GO:0016491 ... Q2RW98 N/A
    971950 9fmg:D (2.71) BS01 ADP N/A GO:0005524 ... Q2RW96 N/A
    971951 9fmg:D (2.71) BS02 AF3 N/A GO:0005524 ... Q2RW96 N/A
    971952 9fmg:D (2.71) BS03 SF4 N/A GO:0005524 ... Q2RW96 N/A
    971953 9fmg:D (2.71) BS04 ADP N/A GO:0005524 ... Q2RW96 N/A
    971954 9fmg:D (2.71) BS05 AF3 N/A GO:0005524 ... Q2RW96 N/A
    971955 9fmg:E (2.71) BS01 ADP N/A GO:0005524 ... Q2RW96 N/A
    971956 9fmg:E (2.71) BS02 SF4 N/A GO:0005524 ... Q2RW96 N/A
    971957 9fmg:E (2.71) BS03 ADP N/A GO:0005524 ... Q2RW96 N/A
    971958 9fmg:E (2.71) BS04 AF3 N/A GO:0005524 ... Q2RW96 N/A
    971959 9fmh:A (0.9) BS01 SAH N/A GO:0005634 ... P0DPA9 39413044
    971960 9fmh:A (0.9) BS02 XP6 N/A GO:0005634 ... P0DPA9 39413044
    971961 9fmi:A (0.9) BS01 SAH N/A GO:0005634 ... P0DPA9 39413044
    971962 9fmi:A (0.9) BS02 XP6 N/A GO:0005634 ... P0DPA9 39413044
    971963 9fmj:A (0.95) BS01 SFG N/A GO:0005634 ... P0DPA9 39413044
    971964 9fmj:A (0.95) BS02 XPN N/A GO:0005634 ... P0DPA9 39413044
    971965 9fmk:A (1.01) BS01 SFG N/A GO:0005634 ... P0DPA9 39413044
    971966 9fmk:A (1.01) BS02 XPN N/A GO:0005634 ... P0DPA9 39413044
    971967 9fmm:A (2.5) BS01 A1IDX N/A GO:0000122 ... Q9BYF1 39066808
    971968 9fmm:A (2.5) BS02 ZN N/A GO:0000122 ... Q9BYF1 39066808
    971969 9fmm:B (2.5) BS01 A1IDX N/A GO:0000122 ... Q9BYF1 39066808
    971970 9fmm:B (2.5) BS02 ZN N/A GO:0000122 ... Q9BYF1 39066808
    971971 9fmp:A (2.69) BS01 ADN N/A GO:0004672 ... M1UWB5 N/A
    971972 9fmp:B (2.69) BS01 ADN N/A GO:0004672 ... M1UWB5 N/A
    971973 9fmq:A (1.77) BS01 CA N/A GO:0004672 ... M1UWB5 N/A
    971974 9fmr:A (3.9) BS01 RMF N/A GO:0003676 ... Q16531 39450271
    971975 9fmr:B (3.9) BS01 RMF N/A GO:0004672 ... Q9NYV4 39450271
    971976 9fmr:D (3.9) BS01 RMF N/A GO:0003676 ... Q16531 39450271
    971977 9fmr:E (3.9) BS01 RMF N/A GO:0004672 ... Q9NYV4 39450271
    971978 9fmr:G (3.9) BS01 RMF N/A GO:0003676 ... Q16531 39450271
    971979 9fmr:H (3.9) BS01 RMF N/A GO:0004672 ... Q9NYV4 39450271
    971980 9fms:A (2.65) BS01 peptide N/A GO:0000448 ... P53063 39657659
    971981 9fms:A (2.65) BS02 MG N/A GO:0000448 ... P53063 39657659
    971982 9fmu:A (4.46) BS01 HEM N/A GO:0004601 ... P69905 39738064
    971983 9fmu:B (4.46) BS01 HEM N/A GO:0004601 ... P68871 39738064
    971984 9fmu:D (4.46) BS01 CA N/A GO:0016020 ... Q86VB7 39738064
    971985 9fmu:D (4.46) BS02 CA N/A GO:0016020 ... Q86VB7 39738064
    971986 9fmu:E (4.46) BS01 CA N/A GO:0016020 ... Q86VB7 39738064
    971987 9fmy:AAA (1.09) BS01 A1IE3 N/A GO:0003796 ... P00698 N/A
    971988 9fmy:AAA (1.09) BS02 VVB N/A GO:0003796 ... P00698 N/A
    971989 9fmy:AAA (1.09) BS03 VVB N/A GO:0003796 ... P00698 N/A
    971990 9fmy:AAA (1.09) BS04 A1IE4 N/A GO:0003796 ... P00698 N/A
    971991 9fmz:A (3.6) BS01 C2E N/A GO:0005886 ... P37653 39394223
    971992 9fmz:A (3.6) BS02 C2E N/A GO:0005886 ... P37653 39394223
    971993 9fn0:D (1.5) BS01 COA N/A GO:0008410 ... Q5P688 N/A
    971994 9fn5:A (2.35) BS01 MG N/A GO:0000160 ... A0A090IXS5 N/A
    971995 9fn5:B (2.35) BS01 MG N/A GO:0000160 ... A0A090IXS5 N/A
    971996 9fn7:A (1.12) BS01 ZN N/A GO:0004089 ... O43570 39905940
    971997 9fn7:A (1.12) BS02 A1ID0 N/A GO:0004089 ... O43570 39905940
    971998 9fn7:B (1.12) BS01 ZN N/A GO:0004089 ... O43570 39905940
    971999 9fn7:B (1.12) BS02 A1ID0 N/A GO:0004089 ... O43570 39905940
    972000 9fn7:C (1.12) BS01 ZN N/A GO:0004089 ... O43570 39905940

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).