SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    972401 9fp3:D (2.42) BS03 B4P N/A GO:0000287 ... Q8RQE8 41513851
    972402 9fp3:D (2.42) BS04 ZN N/A GO:0000287 ... Q8RQE8 41513851
    972403 9fp3:D (2.42) BS05 ZN N/A GO:0000287 ... Q8RQE8 41513851
    972404 9fp3:D (2.42) BS06 MG N/A GO:0000287 ... Q8RQE8 41513851
    972405 9fp3:D (2.42) BS07 G2P N/A GO:0000287 ... Q8RQE8 41513851
    972406 9fp3:F (2.42) BS01 dna N/A GO:0003677 ... Q72L95 41513851
    972407 9fp3:F (2.42) BS02 dna N/A GO:0003677 ... Q72L95 41513851
    972408 9fp4:A (1.45) BS01 TEW N/A GO:0016705 ... P96809 N/A
    972409 9fp4:B (1.45) BS01 TEW N/A GO:0016705 ... P96809 N/A
    972410 9fp6:A (2.9) BS01 ATP N/A GO:0006952 ... A0A0S3ANR1 39504373
    972411 9fp6:B (2.9) BS01 ATP N/A GO:0006952 ... A0A0S3ANR1 39504373
    972412 9fp6:C (2.9) BS01 ATP N/A GO:0006952 ... A0A0S3ANR1 39504373
    972413 9fp6:D (2.9) BS01 ATP N/A GO:0006952 ... A0A0S3ANR1 39504373
    972414 9fp6:E (2.9) BS01 ATP N/A GO:0006952 ... A0A0S3ANR1 39504373
    972415 9fp6:F (2.9) BS01 ATP N/A GO:0006952 ... A0A0S3ANR1 39504373
    972416 9fpd:A (2.402) BS01 A1IED N/A GO:0004672 ... O43318
    Q15750
    39576936
    972417 9fpe:A (1.35) BS01 A1IEC N/A GO:0003824 ... P0ABP8 39408755
    972418 9fpe:B (1.35) BS01 A1IEC N/A GO:0003824 ... P0ABP8 39408755
    972419 9fpe:C (1.35) BS01 A1IEC N/A GO:0003824 ... P0ABP8 39408755
    972420 9fpf:X (1.27) BS01 SF4 N/A GO:0003824 ... Q9F8A8 N/A
    972421 9fpf:X (1.27) BS02 FES N/A GO:0003824 ... Q9F8A8 N/A
    972422 9fpf:X (1.27) BS03 WCC N/A GO:0003824 ... Q9F8A8 N/A
    972423 9fpf:X (1.27) BS04 FE2 N/A GO:0003824 ... Q9F8A8 N/A
    972424 9fpg:X (1.31) BS01 SF4 N/A GO:0003824 ... Q9F8A8 N/A
    972425 9fpg:X (1.31) BS02 FES N/A GO:0003824 ... Q9F8A8 N/A
    972426 9fpg:X (1.31) BS03 WCC N/A GO:0003824 ... Q9F8A8 N/A
    972427 9fpg:X (1.31) BS04 FE N/A GO:0003824 ... Q9F8A8 N/A
    972428 9fph:X (1.01) BS01 SF4 N/A GO:0003824 ... Q9F8A8 N/A
    972429 9fph:X (1.01) BS02 FES N/A GO:0003824 ... Q9F8A8 N/A
    972430 9fph:X (1.01) BS03 WCC N/A GO:0003824 ... Q9F8A8 N/A
    972431 9fph:X (1.01) BS04 FE N/A GO:0003824 ... Q9F8A8 N/A
    972432 9fpi:X (1.01) BS01 SF4 N/A GO:0003824 ... Q9F8A8 N/A
    972433 9fpi:X (1.01) BS02 FES N/A GO:0003824 ... Q9F8A8 N/A
    972434 9fpi:X (1.01) BS03 F3S N/A GO:0003824 ... Q9F8A8 N/A
    972435 9fpi:X (1.01) BS04 FE N/A GO:0003824 ... Q9F8A8 N/A
    972436 9fpj:X (1.18) BS01 SF4 N/A GO:0003824 ... Q9F8A8 N/A
    972437 9fpj:X (1.18) BS02 FES N/A GO:0003824 ... Q9F8A8 N/A
    972438 9fpj:X (1.18) BS03 F3S N/A GO:0003824 ... Q9F8A8 N/A
    972439 9fpj:X (1.18) BS04 FE N/A GO:0003824 ... Q9F8A8 N/A
    972440 9fpk:X (1.26) BS01 SF4 N/A GO:0003824 ... Q9F8A8 N/A
    972441 9fpk:X (1.26) BS02 FES N/A GO:0003824 ... Q9F8A8 N/A
    972442 9fpk:X (1.26) BS03 F3S N/A GO:0003824 ... Q9F8A8 N/A
    972443 9fpk:X (1.26) BS04 FE N/A GO:0003824 ... Q9F8A8 N/A
    972444 9fpl:X (1.31) BS01 SF4 N/A GO:0003824 ... Q9F8A8 N/A
    972445 9fpl:X (1.31) BS02 FES N/A GO:0003824 ... Q9F8A8 N/A
    972446 9fpl:X (1.31) BS03 F3S N/A GO:0003824 ... Q9F8A8 N/A
    972447 9fpl:X (1.31) BS04 FE N/A GO:0003824 ... Q9F8A8 N/A
    972448 9fpn:X (1.16) BS01 SF4 N/A GO:0003824 ... Q9F8A8 N/A
    972449 9fpn:X (1.16) BS02 FES N/A GO:0003824 ... Q9F8A8 N/A
    972450 9fpn:X (1.16) BS03 WCC N/A GO:0003824 ... Q9F8A8 N/A
    972451 9fpn:X (1.16) BS04 FE N/A GO:0003824 ... Q9F8A8 N/A
    972452 9fpo:X (1.03) BS01 SF4 N/A GO:0003824 ... Q9F8A8 N/A
    972453 9fpo:X (1.03) BS02 FES N/A GO:0003824 ... Q9F8A8 N/A
    972454 9fpo:X (1.03) BS03 F3S N/A GO:0003824 ... Q9F8A8 N/A
    972455 9fpo:X (1.03) BS04 FE N/A GO:0003824 ... Q9F8A8 N/A
    972456 9fpp:A (2.35) BS01 TEW N/A GO:0016705 ... P96809 N/A
    972457 9fpp:A (2.35) BS02 TEW N/A GO:0016705 ... P96809 N/A
    972458 9fpp:A (2.35) BS03 TEW N/A GO:0016705 ... P96809 N/A
    972459 9fpp:B (2.35) BS01 F42 N/A GO:0016705 ... P96809 N/A
    972460 9fpp:B (2.35) BS02 TEW N/A GO:0016705 ... P96809 N/A
    972461 9fpp:E (2.35) BS01 TEW N/A GO:0016705 ... P96809 N/A
    972462 9fpp:E (2.35) BS02 TEW N/A GO:0016705 ... P96809 N/A
    972463 9fpp:E (2.35) BS03 TEW N/A GO:0016705 ... P96809 N/A
    972464 9fpp:F (2.35) BS01 TEW N/A GO:0016705 ... P96809 N/A
    972465 9fpp:F (2.35) BS02 F42 N/A GO:0016705 ... P96809 N/A
    972466 9fpq:A (1.5) BS01 ZN N/A GO:0004064 ... P00918 40801814
    972467 9fpq:A (1.5) BS02 A1IEL N/A GO:0004064 ... P00918 40801814
    972468 9fpr:A (1.46) BS01 ZN N/A GO:0004064 ... P00918 40801814
    972469 9fpr:A (1.46) BS02 A1IEN N/A GO:0004064 ... P00918 40801814
    972470 9fps:A (1.39) BS01 ZN N/A GO:0004064 ... P00918 40801814
    972471 9fps:A (1.39) BS02 A1IEM N/A GO:0004064 ... P00918 40801814
    972472 9fps:A (1.39) BS03 A1IEM N/A GO:0004064 ... P00918 40801814
    972473 9fpt:A (1.18) BS01 ZN N/A GO:0004064 ... P00918 40801814
    972474 9fpt:A (1.18) BS02 A1IEO N/A GO:0004064 ... P00918 40801814
    972475 9fpu:A (1.12) BS01 ZN N/A GO:0004064 ... P00918 40801814
    972476 9fpu:A (1.12) BS02 A1IEP N/A GO:0004064 ... P00918 40801814
    972477 9fpv:A (1.7) BS01 ZN N/A GO:0004089 ... Q8N1Q1 40801814
    972478 9fpv:A (1.7) BS02 A1IEL N/A GO:0004089 ... Q8N1Q1 40801814
    972479 9fpv:B (1.7) BS01 ZN N/A GO:0004089 ... Q8N1Q1 40801814
    972480 9fpv:B (1.7) BS02 A1IEL N/A GO:0004089 ... Q8N1Q1 40801814
    972481 9fpw:A (1.9) BS01 ZN N/A GO:0004089 ... Q8N1Q1 40801814
    972482 9fpw:A (1.9) BS02 A1IEN N/A GO:0004089 ... Q8N1Q1 40801814
    972483 9fpw:B (1.9) BS01 ZN N/A GO:0004089 ... Q8N1Q1 40801814
    972484 9fpw:B (1.9) BS02 A1IEN N/A GO:0004089 ... Q8N1Q1 40801814
    972485 9fpx:A (2.69) BS01 CC9 N/A GO:0004672 ... Q13627 N/A
    972486 9fpx:B (2.69) BS01 CC9 N/A GO:0004672 ... Q13627 N/A
    972487 9fpy:A (2.4) BS01 MG N/A GO:0000428 ... P20504 N/A
    972488 9fpy:A (2.4) BS02 ZN N/A GO:0000428 ... P20504 N/A
    972489 9fpy:A (2.4) BS03 ZN N/A GO:0000428 ... P20504 N/A
    972490 9fpy:B (2.4) BS01 ZN N/A GO:0000428 ... P68694 N/A
    972491 9fpy:I (2.4) BS01 rna N/A GO:0003700 ... P68439 N/A
    972492 9fpy:I (2.4) BS02 ZN N/A GO:0003700 ... P68439 N/A
    972493 9fpy:Y (2.4) BS01 rna N/A GO:0000166 ... P20637 N/A
    972494 9fpz:A (2.69) BS01 rna N/A GO:0003723 ... P50579 39227397
    972495 9fpz:A (2.69) BS02 CO N/A GO:0003723 ... P50579 39227397
    972496 9fpz:A (2.69) BS03 CO N/A GO:0003723 ... P50579 39227397
    972497 9fpz:B (2.69) BS01 rna N/A GO:0003723 ... Q9BXJ9 39227397
    972498 9fpz:B (2.69) BS02 IHP N/A GO:0003723 ... Q9BXJ9 39227397
    972499 9fpz:LC (2.69) BS01 rna N/A GO:0002181 ... P36578 39227397
    972500 9fpz:LE (2.69) BS01 rna N/A GO:0002181 ... Q02878 39227397
    972501 9fpz:LR (2.69) BS01 rna N/A GO:0002181 ... P84098 39227397
    972502 9fpz:LX (2.69) BS01 rna N/A GO:0002181 ... P62750 39227397
    972503 9fpz:LX (2.69) BS02 rna N/A GO:0002181 ... P62750 39227397
    972504 9fpz:LY (2.69) BS01 rna N/A GO:0002181 ... P61254 39227397
    972505 9fpz:LY (2.69) BS02 rna N/A GO:0002181 ... P61254 39227397
    972506 9fpz:Lh (2.69) BS01 rna N/A GO:0000463 ... P42766 39227397
    972507 9fpz:Lk (2.69) BS01 rna N/A GO:0002181 ... P63173 39227397
    972508 9fpz:Lr (2.69) BS01 rna N/A GO:0002181 ... P46779 39227397
    972509 9fq0:B (4.67) BS01 rna N/A GO:0003723 ... Q9BXJ9 39227397
    972510 9fq0:B (4.67) BS02 IHP N/A GO:0003723 ... Q9BXJ9 39227397
    972511 9fq0:D (4.67) BS01 rna N/A GO:0003723 ... P20290 39227397
    972512 9fq0:LC (4.67) BS01 rna N/A GO:0002181 ... P36578 39227397
    972513 9fq0:LE (4.67) BS01 rna N/A GO:0002181 ... Q02878 39227397
    972514 9fq0:LR (4.67) BS01 rna N/A GO:0002181 ... P84098 39227397
    972515 9fq0:LU (4.67) BS01 rna N/A GO:0002181 ... P35268 39227397
    972516 9fq0:LX (4.67) BS01 rna N/A GO:0002181 ... P62750 39227397
    972517 9fq0:LX (4.67) BS02 rna N/A GO:0002181 ... P62750 39227397
    972518 9fq0:LY (4.67) BS01 rna N/A GO:0003723 ... Q6IBH6 39227397
    972519 9fq0:LY (4.67) BS02 rna N/A GO:0003723 ... Q6IBH6 39227397
    972520 9fq0:Lh (4.67) BS01 rna N/A GO:0000463 ... P42766 39227397
    972521 9fq0:Lk (4.67) BS01 rna N/A GO:0002181 ... P63173 39227397
    972522 9fq0:Lr (4.67) BS01 rna N/A GO:0002181 ... P46779 39227397
    972523 9fq4:A (1.2) BS01 NAP N/A GO:0004365 ... O25902 N/A
    972524 9fq5:A (1.9) BS01 MG N/A GO:0006564 ... Q8YI30 40719280
    972525 9fq6:A (2.5) BS01 MG N/A GO:0000428 ... P20504 N/A
    972526 9fq6:A (2.5) BS02 ZN N/A GO:0000428 ... P20504 N/A
    972527 9fq6:A (2.5) BS03 ZN N/A GO:0000428 ... P20504 N/A
    972528 9fq6:B (2.5) BS01 ZN N/A GO:0000428 ... P68694 N/A
    972529 9fq6:I (2.5) BS01 rna N/A GO:0003700 ... P68439 N/A
    972530 9fq6:I (2.5) BS02 ZN N/A GO:0003700 ... P68439 N/A
    972531 9fq6:Y (2.5) BS01 rna N/A GO:0000166 ... Q49PL2 N/A
    972532 9fq7:2M (2.5) BS01 FAD N/A GO:0000104 ... C5LYE7 N/A
    972533 9fq7:2N (2.5) BS01 UQ1 N/A GO:0005743 ... C5LYT4 N/A
    972534 9fq7:2N (2.5) BS02 FES N/A GO:0005743 ... C5LYT4 N/A
    972535 9fq7:2N (2.5) BS03 SF4 N/A GO:0005743 ... C5LYT4 N/A
    972536 9fq7:2N (2.5) BS04 F3S N/A GO:0005743 ... C5LYT4 N/A
    972537 9fq7:2m (2.5) BS01 FAD N/A GO:0000104 ... C5LYE7 N/A
    972538 9fq7:2n (2.5) BS01 FES N/A GO:0005743 ... C5LYT4 N/A
    972539 9fq7:2n (2.5) BS02 SF4 N/A GO:0005743 ... C5LYT4 N/A
    972540 9fq7:2n (2.5) BS03 F3S N/A GO:0005743 ... C5LYT4 N/A
    972541 9fq7:3C (2.5) BS01 HEC N/A GO:0009055 ... C5K8N0 N/A
    972542 9fq7:3G (2.5) BS01 UQ1 N/A GO:0005743 ... F8SRJ0 N/A
    972543 9fq7:3G (2.5) BS02 UQ1 N/A GO:0005743 ... F8SRJ0 N/A
    972544 9fq7:3G (2.5) BS03 HEM N/A GO:0005743 ... F8SRJ0 N/A
    972545 9fq7:3G (2.5) BS04 HEM N/A GO:0005743 ... F8SRJ0 N/A
    972546 9fq7:3H (2.5) BS01 FES N/A GO:0008121 ... C5KYR8 N/A
    972547 9fq7:3c (2.5) BS01 HEC N/A GO:0009055 ... C5K8N0 N/A
    972548 9fq7:3g (2.5) BS01 UQ1 N/A GO:0005743 ... F8SRJ0 N/A
    972549 9fq7:3g (2.5) BS02 UQ1 N/A GO:0005743 ... F8SRJ0 N/A
    972550 9fq7:3g (2.5) BS03 HEM N/A GO:0005743 ... F8SRJ0 N/A
    972551 9fq7:3g (2.5) BS04 HEM N/A GO:0005743 ... F8SRJ0 N/A
    972552 9fq7:3h (2.5) BS01 FES N/A GO:0008121 ... C5KYR8 N/A
    972553 9fq7:4N (2.5) BS01 CUA N/A GO:0004129 ... C5K5E4 N/A
    972554 9fq7:4Q (2.5) BS01 CU N/A GO:0004129 ... F8SRI9 N/A
    972555 9fq7:4Q (2.5) BS02 MG N/A GO:0004129 ... F8SRI9 N/A
    972556 9fq7:4Q (2.5) BS03 HEA N/A GO:0004129 ... F8SRI9 N/A
    972557 9fq7:4Q (2.5) BS04 HEA N/A GO:0004129 ... F8SRI9 N/A
    972558 9fq7:4T (2.5) BS01 ZN N/A N/A C5K4P8 N/A
    972559 9fq7:4T (2.5) BS02 ZN N/A N/A C5K4P8 N/A
    972560 9fq7:4X (2.5) BS01 ZN N/A GO:0005740 ... C5LUB2 N/A
    972561 9fq7:4n (2.5) BS01 CUA N/A GO:0004129 ... C5K5E4 N/A
    972562 9fq7:4q (2.5) BS01 CU N/A GO:0004129 ... F8SRI9 N/A
    972563 9fq7:4q (2.5) BS02 MG N/A GO:0004129 ... F8SRI9 N/A
    972564 9fq7:4q (2.5) BS03 HEA N/A GO:0004129 ... F8SRI9 N/A
    972565 9fq7:4q (2.5) BS04 HEA N/A GO:0004129 ... F8SRI9 N/A
    972566 9fq7:4t (2.5) BS01 ZN N/A N/A C5K4P8 N/A
    972567 9fq7:4t (2.5) BS02 ZN N/A N/A C5K4P8 N/A
    972568 9fq7:4x (2.5) BS01 ZN N/A GO:0005740 ... C5LUB2 N/A
    972569 9fq8:4N (2.2) BS01 CUA N/A GO:0004129 ... C5K5E4 N/A
    972570 9fq8:4Q (2.2) BS01 CU N/A GO:0004129 ... F8SRI9 N/A
    972571 9fq8:4Q (2.2) BS02 MG N/A GO:0004129 ... F8SRI9 N/A
    972572 9fq8:4Q (2.2) BS03 HEA N/A GO:0004129 ... F8SRI9 N/A
    972573 9fq8:4Q (2.2) BS04 HEA N/A GO:0004129 ... F8SRI9 N/A
    972574 9fq8:4T (2.2) BS01 ZN N/A N/A C5K4P8 N/A
    972575 9fq8:4T (2.2) BS02 ZN N/A N/A C5K4P8 N/A
    972576 9fq8:4X (2.2) BS01 ZN N/A GO:0005740 ... C5LUB2 N/A
    972577 9fq9:A (1.25) BS01 A1IF1 N/A GO:0008233 ... P0DTD1 39146284
    972578 9fqa:A (1.47) BS01 A1IEY N/A GO:0008233 ... P0DTD1 39146284
    972579 9fqa:A (1.47) BS02 MG N/A GO:0008233 ... P0DTD1 39146284
    972580 9fqc:A (2.35) BS01 SEP N/A GO:0006564 ... Q8YI30 40719280
    972581 9fqc:A (2.35) BS02 CA N/A GO:0006564 ... Q8YI30 40719280
    972582 9fqd:A (1.7) BS01 ZN N/A GO:0004222 ... P14756 39973061
    972583 9fqd:A (1.7) BS02 CA N/A GO:0004222 ... P14756 39973061
    972584 9fqd:A (1.7) BS03 A1IEX N/A GO:0004222 ... P14756 39973061
    972585 9fqe:A (1.6) BS01 CA N/A GO:0004222 ... P14756 N/A
    972586 9fqe:A (1.6) BS02 A1IEU N/A GO:0004222 ... P14756 N/A
    972587 9fqe:A (1.6) BS03 ZN N/A GO:0004222 ... P14756 N/A
    972588 9fqh:A (1.786) BS01 A1IEW N/A GO:0001784 ... Q13191 39132828
    972589 9fqh:A (1.786) BS02 ZN N/A GO:0001784 ... Q13191 39132828
    972590 9fqh:A (1.786) BS03 ZN N/A GO:0001784 ... Q13191 39132828
    972591 9fqi:A (1.954) BS01 A1IEV N/A GO:0001784 ... Q13191 39132828
    972592 9fqi:A (1.954) BS02 ZN N/A GO:0001784 ... Q13191 39132828
    972593 9fqi:A (1.954) BS03 ZN N/A GO:0001784 ... Q13191 39132828
    972594 9fqj:A (1.563) BS01 A1IE5 N/A GO:0001784 ... Q13191 39132828
    972595 9fqj:A (1.563) BS02 ZN N/A GO:0001784 ... Q13191 39132828
    972596 9fqj:A (1.563) BS03 ZN N/A GO:0001784 ... Q13191 39132828
    972597 9fqj:B (1.563) BS01 A1IE5 N/A GO:0001784 ... Q13191 39132828
    972598 9fqj:B (1.563) BS02 ZN N/A GO:0001784 ... Q13191 39132828
    972599 9fqj:B (1.563) BS03 ZN N/A GO:0001784 ... Q13191 39132828
    972600 9fqk:2m (2.2) BS01 FAD N/A GO:0000104 ... C5LYE7 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).