SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    973401 9fqr:Vg (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973402 9fqr:Vg (5.0) BS02 MG N/A GO:0000226 ... Q32KN8 39743588
    973403 9fqr:Vh (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973404 9fqr:Vi (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973405 9fqr:Vj (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973406 9fqr:Vk (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973407 9fqr:Vm (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973408 9fqr:Vn (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973409 9fqr:Vo (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973410 9fqr:Vo (5.0) BS02 GTP N/A GO:0000226 ... Q3MHM5 39743588
    973411 9fqr:Vp (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973412 9fqr:Vq (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973413 9fqr:Vq (5.0) BS02 GTP N/A GO:0000226 ... Q3MHM5 39743588
    973414 9fqr:Vr (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973415 9fqr:Vs (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973416 9fqr:Vt (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973417 9fqr:Vu (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973418 9fqr:Vu (5.0) BS02 GTP N/A GO:0000226 ... Q3MHM5 39743588
    973419 9fqr:Vv (5.0) BS01 MG N/A GO:0000226 ... Q32KN8 39743588
    973420 9fqr:Vv (5.0) BS02 GTP N/A GO:0000226 ... Q32KN8 39743588
    973421 9fqr:Vw (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973422 9fqr:Vw (5.0) BS02 GTP N/A GO:0000226 ... Q3MHM5 39743588
    973423 9fqr:Vx (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973424 9fqr:Vz (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973425 9fqr:WA (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973426 9fqr:WB (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973427 9fqr:WC (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973428 9fqr:WC (5.0) BS02 MG N/A GO:0000226 ... Q32KN8 39743588
    973429 9fqr:WD (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973430 9fqr:WE (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973431 9fqr:WE (5.0) BS02 MG N/A GO:0000226 ... Q32KN8 39743588
    973432 9fqr:WF (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973433 9fqr:WG (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973434 9fqr:WG (5.0) BS02 MG N/A GO:0000226 ... Q32KN8 39743588
    973435 9fqr:WH (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973436 9fqr:WI (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973437 9fqr:WJ (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973438 9fqr:WK (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973439 9fqr:WL (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973440 9fqr:WM (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973441 9fqr:WM (5.0) BS02 MG N/A GO:0000226 ... Q32KN8 39743588
    973442 9fqr:WN (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973443 9fqr:WO (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973444 9fqr:WP (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973445 9fqr:WP (5.0) BS02 MG N/A GO:0000226 ... Q32KN8 39743588
    973446 9fqr:WQ (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973447 9fqr:WR (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973448 9fqr:WR (5.0) BS02 MG N/A GO:0000226 ... Q32KN8 39743588
    973449 9fqr:WS (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973450 9fqr:WU (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973451 9fqr:WV (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973452 9fqr:WV (5.0) BS02 MG N/A GO:0000226 ... Q32KN8 39743588
    973453 9fqr:WW (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973454 9fqr:WX (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973455 9fqr:WX (5.0) BS02 MG N/A GO:0000226 ... Q32KN8 39743588
    973456 9fqr:WY (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973457 9fqr:WZ (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973458 9fqr:WZ (5.0) BS02 MG N/A GO:0000226 ... Q32KN8 39743588
    973459 9fqr:Wa (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973460 9fqr:Wb (5.0) BS01 MG N/A GO:0000226 ... Q32KN8 39743588
    973461 9fqr:Wb (5.0) BS02 GTP N/A GO:0000226 ... Q32KN8 39743588
    973462 9fqr:Wc (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973463 9fqr:Wd (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973464 9fqr:Wd (5.0) BS02 MG N/A GO:0000226 ... Q32KN8 39743588
    973465 9fqr:We (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973466 9fqr:Wf (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973467 9fqr:Wf (5.0) BS02 MG N/A GO:0000226 ... Q32KN8 39743588
    973468 9fqr:Wg (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973469 9fqr:Wi (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973470 9fqr:Wj (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973471 9fqr:Wj (5.0) BS02 MG N/A GO:0000226 ... Q32KN8 39743588
    973472 9fqr:Wk (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973473 9fqr:Wl (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973474 9fqr:Wl (5.0) BS02 MG N/A GO:0000226 ... Q32KN8 39743588
    973475 9fqr:Wm (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973476 9fqr:Wn (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973477 9fqr:Wn (5.0) BS02 MG N/A GO:0000226 ... Q32KN8 39743588
    973478 9fqr:Wo (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973479 9fqr:Wp (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973480 9fqr:Wq (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973481 9fqr:Wr (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973482 9fqr:Ws (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973483 9fqr:Wt (5.0) BS01 GTP N/A GO:0000226 ... Q32KN8 39743588
    973484 9fqr:Wu (5.0) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    973485 9fqs:A (1.783) BS01 A1IE0 N/A GO:0004672 ... P00533 39824516
    973486 9fqt:A (3.5) BS01 Y01 N/A GO:0000064 ... Q09143 41698924
    973487 9fqu:A (2.79) BS01 Y01 N/A GO:0000064 ... Q09143 41698924
    973488 9fqu:A (2.79) BS02 Y01 N/A GO:0000064 ... Q09143 41698924
    973489 9fqu:A (2.79) BS03 ARG N/A GO:0000064 ... Q09143 41698924
    973490 9fqv:A (2.95) BS01 LYS N/A GO:0000064 ... Q09143 41698924
    973491 9fqv:A (2.95) BS02 Y01 N/A GO:0000064 ... Q09143 41698924
    973492 9fqv:A (2.95) BS03 Y01 N/A GO:0000064 ... Q09143 41698924
    973493 9fqw:A (3.01) BS01 Y01 N/A GO:0000064 ... Q09143 41698924
    973494 9fqw:A (3.01) BS02 Y01 N/A GO:0000064 ... Q09143 41698924
    973495 9fqw:A (3.01) BS03 ORN N/A GO:0000064 ... Q09143 41698924
    973496 9fqw:B (3.01) BS01 FUC N/A N/A P03390 41698924
    973497 9fqx:A (1.8) BS01 CA N/A GO:0004222 ... P14756 N/A
    973498 9fqx:A (1.8) BS02 ZN N/A GO:0004222 ... P14756 N/A
    973499 9fqx:A (1.8) BS03 A1IJJ N/A GO:0004222 ... P14756 N/A
    973500 9fqy:A (1.6) BS01 ZN N/A GO:0004222 ... P14756 39973061
    973501 9fqy:A (1.6) BS02 CA N/A GO:0004222 ... P14756 39973061
    973502 9fqy:A (1.6) BS03 A1IFN N/A GO:0004222 ... P14756 39973061
    973503 9fqz:CB (2.85) BS01 rna N/A GO:0002039 ... P13639 N/A
    973504 9fqz:CB (2.85) BS02 rna N/A GO:0002039 ... P13639 N/A
    973505 9fqz:CB (2.85) BS03 GDP N/A GO:0002039 ... P13639 N/A
    973506 9fqz:CD (2.85) BS01 rna N/A GO:0003723 ... Q8NC51 N/A
    973507 9fqz:LA (2.85) BS01 rna N/A GO:0002181 ... P62917 N/A
    973508 9fqz:LA (2.85) BS02 rna N/A GO:0002181 ... P62917 N/A
    973509 9fqz:LB (2.85) BS01 rna N/A GO:0002181 ... P39023 N/A
    973510 9fqz:LC (2.85) BS01 rna N/A GO:0002181 ... P36578 N/A
    973511 9fqz:LC (2.85) BS02 rna N/A GO:0002181 ... P36578 N/A
    973512 9fqz:LD (2.85) BS01 rna N/A GO:0000027 ... P46777 N/A
    973513 9fqz:LD (2.85) BS02 rna N/A GO:0000027 ... P46777 N/A
    973514 9fqz:LE (2.85) BS01 rna N/A GO:0002181 ... Q02878 N/A
    973515 9fqz:LF (2.85) BS01 rna N/A GO:0000463 ... P18124 N/A
    973516 9fqz:LF (2.85) BS02 rna N/A GO:0000463 ... P18124 N/A
    973517 9fqz:LG (2.85) BS01 rna N/A GO:0000470 ... P62424 N/A
    973518 9fqz:LG (2.85) BS02 rna N/A GO:0000470 ... P62424 N/A
    973519 9fqz:LH (2.85) BS01 rna N/A GO:0002181 ... P32969 N/A
    973520 9fqz:LI (2.85) BS01 rna N/A GO:0000027 ... Q96L21 N/A
    973521 9fqz:LI (2.85) BS02 rna N/A GO:0000027 ... Q96L21 N/A
    973522 9fqz:LJ (2.85) BS01 rna N/A GO:0000027 ... P62913 N/A
    973523 9fqz:LJ (2.85) BS02 rna N/A GO:0000027 ... P62913 N/A
    973524 9fqz:LL (2.85) BS01 rna N/A GO:0002181 ... P26373 N/A
    973525 9fqz:LL (2.85) BS02 rna N/A GO:0002181 ... P26373 N/A
    973526 9fqz:LM (2.85) BS01 rna N/A GO:0002181 ... P50914 N/A
    973527 9fqz:LN (2.85) BS01 rna N/A GO:0002181 ... P61313 N/A
    973528 9fqz:LN (2.85) BS02 rna N/A GO:0002181 ... P61313 N/A
    973529 9fqz:LO (2.85) BS01 rna N/A GO:0002181 ... P40429 N/A
    973530 9fqz:LP (2.85) BS01 rna N/A GO:0002181 ... P18621 N/A
    973531 9fqz:LP (2.85) BS02 rna N/A GO:0002181 ... P18621 N/A
    973532 9fqz:LQ (2.85) BS01 rna N/A GO:0002181 ... Q07020 N/A
    973533 9fqz:LR (2.85) BS01 rna N/A GO:0002181 ... P84098 N/A
    973534 9fqz:LR (2.85) BS02 rna N/A GO:0002181 ... P84098 N/A
    973535 9fqz:LS (2.85) BS01 rna N/A GO:0002181 ... Q02543 N/A
    973536 9fqz:LS (2.85) BS02 rna N/A GO:0002181 ... Q02543 N/A
    973537 9fqz:LT (2.85) BS01 rna N/A GO:0001650 ... P46778 N/A
    973538 9fqz:LT (2.85) BS02 rna N/A GO:0001650 ... P46778 N/A
    973539 9fqz:LU (2.85) BS01 rna N/A GO:0002181 ... P35268 N/A
    973540 9fqz:LV (2.85) BS01 rna N/A GO:0000122 ... P62829 N/A
    973541 9fqz:LW (2.85) BS01 rna N/A GO:0002181 ... P83731 N/A
    973542 9fqz:LW (2.85) BS02 rna N/A GO:0002181 ... P83731 N/A
    973543 9fqz:LX (2.85) BS01 rna N/A GO:0002181 ... P62750 N/A
    973544 9fqz:LX (2.85) BS02 rna N/A GO:0002181 ... P62750 N/A
    973545 9fqz:LX (2.85) BS03 peptide N/A GO:0002181 ... P62750 N/A
    973546 9fqz:LY (2.85) BS01 rna N/A GO:0002181 ... P61254 N/A
    973547 9fqz:LY (2.85) BS02 rna N/A GO:0002181 ... P61254 N/A
    973548 9fqz:LZ (2.85) BS01 rna N/A GO:0002181 ... P61353 N/A
    973549 9fqz:La (2.85) BS01 rna N/A GO:0002181 ... P46776 N/A
    973550 9fqz:Lb (2.85) BS01 rna N/A GO:0002181 ... P47914 N/A
    973551 9fqz:Lc (2.85) BS01 rna N/A GO:0002181 ... P62888 N/A
    973552 9fqz:Ld (2.85) BS01 rna N/A GO:0002181 ... P62899 N/A
    973553 9fqz:Le (2.85) BS01 rna N/A GO:0002181 ... P62910 N/A
    973554 9fqz:Lf (2.85) BS01 rna N/A GO:0002181 ... P18077 N/A
    973555 9fqz:Lg (2.85) BS01 rna N/A GO:0002181 ... P49207 N/A
    973556 9fqz:Lg (2.85) BS02 ZN N/A GO:0002181 ... P49207 N/A
    973557 9fqz:Lg (2.85) BS03 MG N/A GO:0002181 ... P49207 N/A
    973558 9fqz:Lh (2.85) BS01 rna N/A GO:0000463 ... P42766 N/A
    973559 9fqz:Lh (2.85) BS02 rna N/A GO:0000463 ... P42766 N/A
    973560 9fqz:Li (2.85) BS01 rna N/A GO:0002181 ... Q9Y3U8 N/A
    973561 9fqz:Li (2.85) BS02 MG N/A GO:0002181 ... Q9Y3U8 N/A
    973562 9fqz:Lj (2.85) BS01 rna N/A GO:0000448 ... P61927 N/A
    973563 9fqz:Lj (2.85) BS02 rna N/A GO:0000448 ... P61927 N/A
    973564 9fqz:Lj (2.85) BS03 ZN N/A GO:0000448 ... P61927 N/A
    973565 9fqz:Lk (2.85) BS01 rna N/A GO:0002181 ... P63173 N/A
    973566 9fqz:Ll (2.85) BS01 rna N/A GO:0002181 ... P62891 N/A
    973567 9fqz:Ll (2.85) BS02 rna N/A GO:0002181 ... P62891 N/A
    973568 9fqz:Lm (2.85) BS01 rna N/A GO:0002181 ... P62987 N/A
    973569 9fqz:Lm (2.85) BS02 ZN N/A GO:0002181 ... P62987 N/A
    973570 9fqz:Lo (2.85) BS01 rna N/A GO:0002181 ... P83881 N/A
    973571 9fqz:Lo (2.85) BS02 ZN N/A GO:0002181 ... P83881 N/A
    973572 9fqz:Lp (2.85) BS01 rna N/A GO:0002181 ... P61513 N/A
    973573 9fqz:Lp (2.85) BS02 ZN N/A GO:0002181 ... P61513 N/A
    973574 9fqz:Lq (2.85) BS01 rna N/A GO:0002181 ... P05388 N/A
    973575 9fqz:Lr (2.85) BS01 rna N/A GO:0002181 ... P46779 N/A
    973576 9fqz:SA (2.85) BS01 rna N/A GO:0000028 ... P08865 N/A
    973577 9fqz:SB (2.85) BS01 rna N/A GO:0002181 ... P61247 N/A
    973578 9fqz:SB (2.85) BS02 rna N/A GO:0002181 ... P61247 N/A
    973579 9fqz:SC (2.85) BS01 rna N/A GO:0002181 ... P15880 N/A
    973580 9fqz:SD (2.85) BS01 rna N/A GO:0001228 ... P23396 N/A
    973581 9fqz:SE (2.85) BS01 rna N/A GO:0002181 ... P62701 N/A
    973582 9fqz:SF (2.85) BS01 rna N/A GO:0002181 ... P46782 N/A
    973583 9fqz:SG (2.85) BS01 rna N/A GO:0002181 ... P62753 N/A
    973584 9fqz:SH (2.85) BS01 rna N/A GO:0002181 ... P62081 N/A
    973585 9fqz:SI (2.85) BS01 rna N/A GO:0002181 ... P62241 N/A
    973586 9fqz:SI (2.85) BS02 rna N/A GO:0002181 ... P62241 N/A
    973587 9fqz:SJ (2.85) BS01 rna N/A GO:0002181 ... P46781 N/A
    973588 9fqz:SK (2.85) BS01 rna N/A GO:0002181 ... P46783 N/A
    973589 9fqz:SL (2.85) BS01 rna N/A GO:0002181 ... P62280 N/A
    973590 9fqz:SM (2.85) BS01 rna N/A GO:0002181 ... P25398 N/A
    973591 9fqz:SN (2.85) BS01 rna N/A GO:0000462 ... P62277 N/A
    973592 9fqz:SN (2.85) BS02 rna N/A GO:0000462 ... P62277 N/A
    973593 9fqz:SO (2.85) BS01 rna N/A GO:0000028 ... P62263 N/A
    973594 9fqz:SP (2.85) BS01 rna N/A GO:0000056 ... P62841 N/A
    973595 9fqz:SQ (2.85) BS01 rna N/A GO:0000462 ... P62249 N/A
    973596 9fqz:SR (2.85) BS01 rna N/A GO:0002181 ... P08708 N/A
    973597 9fqz:SS (2.85) BS01 rna N/A GO:0002181 ... P62269 N/A
    973598 9fqz:ST (2.85) BS01 rna N/A GO:0000028 ... P39019 N/A
    973599 9fqz:SU (2.85) BS01 rna N/A GO:0002181 ... P60866 N/A
    973600 9fqz:SW (2.85) BS01 rna N/A GO:0002181 ... P62244 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).