SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    975401 9g00:B (2.88) BS02 SF4 N/A GO:0003824 ... A0A3M0S5E1 39883773
    975402 9g00:B (2.88) BS03 RQM N/A GO:0003824 ... A0A3M0S5E1 39883773
    975403 9g00:C (2.88) BS01 SF4 N/A GO:0003824 ... A0A3M0S5E1 39883773
    975404 9g00:C (2.88) BS02 SF4 N/A GO:0003824 ... A0A3M0S5E1 39883773
    975405 9g00:C (2.88) BS03 RQM N/A GO:0003824 ... A0A3M0S5E1 39883773
    975406 9g00:D (2.88) BS01 SF4 N/A GO:0003824 ... A0A3M0S3T0 39883773
    975407 9g00:D (2.88) BS02 B12 N/A GO:0003824 ... A0A3M0S3T0 39883773
    975408 9g00:F (2.88) BS01 SF4 N/A GO:0051536 ... A0A3M0S5D2 39883773
    975409 9g00:F (2.88) BS02 B12 N/A GO:0051536 ... A0A3M0S5D2 39883773
    975410 9g01:B (2.83) BS01 SF4 N/A GO:0003824 ... A0A3M0S5E1 39883773
    975411 9g01:B (2.83) BS02 SF4 N/A GO:0003824 ... A0A3M0S5E1 39883773
    975412 9g01:B (2.83) BS03 RQM N/A GO:0003824 ... A0A3M0S5E1 39883773
    975413 9g01:C (2.83) BS01 SF4 N/A GO:0003824 ... A0A3M0S5E1 39883773
    975414 9g01:C (2.83) BS02 SF4 N/A GO:0003824 ... A0A3M0S5E1 39883773
    975415 9g01:C (2.83) BS03 RQM N/A GO:0003824 ... A0A3M0S5E1 39883773
    975416 9g01:D (2.83) BS01 SF4 N/A GO:0003824 ... A0A3M0S3T0 39883773
    975417 9g01:D (2.83) BS02 CMO N/A GO:0003824 ... A0A3M0S3T0 39883773
    975418 9g02:B (3.29) BS01 SF4 N/A GO:0003824 ... A0A3M0S5E1 39883773
    975419 9g02:B (3.29) BS02 SF4 N/A GO:0003824 ... A0A3M0S5E1 39883773
    975420 9g02:B (3.29) BS03 RQM N/A GO:0003824 ... A0A3M0S5E1 39883773
    975421 9g02:C (3.29) BS01 SF4 N/A GO:0003824 ... A0A3M0S5E1 39883773
    975422 9g02:C (3.29) BS02 SF4 N/A GO:0003824 ... A0A3M0S5E1 39883773
    975423 9g02:C (3.29) BS03 RQM N/A GO:0003824 ... A0A3M0S5E1 39883773
    975424 9g02:D (3.29) BS01 SF4 N/A GO:0003824 ... A0A3M0S3T0 39883773
    975425 9g03:B (2.1) BS01 SF4 N/A GO:0003824 ... A0A3M0S5E1 39883773
    975426 9g03:B (2.1) BS02 RQM N/A GO:0003824 ... A0A3M0S5E1 39883773
    975427 9g03:B (2.1) BS03 SF4 N/A GO:0003824 ... A0A3M0S5E1 39883773
    975428 9g03:C (2.1) BS01 SF4 N/A GO:0003824 ... A0A3M0S5E1 39883773
    975429 9g03:C (2.1) BS02 SF4 N/A GO:0003824 ... A0A3M0S5E1 39883773
    975430 9g03:C (2.1) BS03 RQM N/A GO:0003824 ... A0A3M0S5E1 39883773
    975431 9g03:E (2.1) BS01 SF4 N/A GO:0005737 ... A0A3M0T3C4 39883773
    975432 9g03:E (2.1) BS02 SF4 N/A GO:0005737 ... A0A3M0T3C4 39883773
    975433 9g05:A (3.13) BS01 peptide N/A N/A N/A 40634635
    975434 9g05:B (3.13) BS01 peptide N/A N/A N/A 40634635
    975435 9g06:C (2.85) BS01 rna N/A GO:0000028 ... P0A7V3 40075065
    975436 9g06:D (2.85) BS01 rna N/A GO:0000028 ... P0A7V8 40075065
    975437 9g06:E (2.85) BS01 rna N/A GO:0000028 ... P0A7W1 40075065
    975438 9g06:F (2.85) BS01 rna N/A GO:0002181 ... P02358 40075065
    975439 9g06:G (2.85) BS01 rna N/A GO:0000028 ... P02359 40075065
    975440 9g06:H (2.85) BS01 rna N/A GO:0000028 ... P0A7W7 40075065
    975441 9g06:I (2.85) BS01 rna N/A GO:0003676 ... P69222 40075065
    975442 9g06:J (2.85) BS01 rna N/A GO:0003743 ... P0A707 40075065
    975443 9g06:J (2.85) BS02 rna N/A GO:0003743 ... P0A707 40075065
    975444 9g06:K (2.85) BS01 rna N/A GO:0002181 ... P0A7R9 40075065
    975445 9g06:L (2.85) BS01 rna N/A GO:0000049 ... P0A7S3 40075065
    975446 9g06:M (2.85) BS01 rna N/A GO:0000049 ... P0A7S9 40075065
    975447 9g06:N (2.85) BS01 rna N/A GO:0000028 ... P0AG59 40075065
    975448 9g06:O (2.85) BS01 rna N/A GO:0000028 ... P0ADZ4 40075065
    975449 9g06:P (2.85) BS01 rna N/A GO:0000028 ... P0A7T3 40075065
    975450 9g06:Q (2.85) BS01 rna N/A GO:0000028 ... P0AG63 40075065
    975451 9g06:R (2.85) BS01 rna N/A GO:0002181 ... P0A7T7 40075065
    975452 9g06:S (2.85) BS01 rna N/A GO:0002181 ... P0A7U3 40075065
    975453 9g06:T (2.85) BS01 rna N/A GO:0000028 ... P0A7U7 40075065
    975454 9g06:U (2.85) BS01 rna N/A GO:0000028 ... P68679 40075065
    975455 9g06:b (2.85) BS01 rna N/A GO:0002181 ... P0A7X3 40075065
    975456 9g06:b (2.85) BS02 rna N/A GO:0002181 ... P0A7X3 40075065
    975457 9g06:c (2.85) BS01 rna N/A GO:0000049 ... P0A7R5 40075065
    975458 9g07:A (1.66) BS01 A1IHU N/A GO:0004347 ... P83780 41532565
    975459 9g07:A (1.66) BS02 PA5 N/A GO:0004347 ... P83780 41532565
    975460 9g08:A (3.3) BS01 ATP N/A GO:0001525 ... Q63HN8 40205224
    975461 9g08:A (3.3) BS02 MG N/A GO:0001525 ... Q63HN8 40205224
    975462 9g08:A (3.3) BS03 ZN N/A GO:0001525 ... Q63HN8 40205224
    975463 9g08:A (3.3) BS04 ZN N/A GO:0001525 ... Q63HN8 40205224
    975464 9g08:A (3.3) BS05 ZN N/A GO:0001525 ... Q63HN8 40205224
    975465 9g09:A (3.4) BS01 ATP N/A GO:0001525 ... Q63HN8 40205224
    975466 9g09:A (3.4) BS02 MG N/A GO:0001525 ... Q63HN8 40205224
    975467 9g09:A (3.4) BS03 ZN N/A GO:0001525 ... Q63HN8 40205224
    975468 9g09:A (3.4) BS04 ZN N/A GO:0001525 ... Q63HN8 40205224
    975469 9g09:A (3.4) BS05 ZN N/A GO:0001525 ... Q63HN8 40205224
    975470 9g0a:A (3.1) BS01 rna N/A GO:0003677 ... I3LJR4 41781612
    975471 9g0a:A (3.1) BS02 dna N/A GO:0003677 ... I3LJR4 41781612
    975472 9g0a:A (3.1) BS03 dna N/A GO:0003677 ... I3LJR4 41781612
    975473 9g0a:A (3.1) BS04 ZN N/A GO:0003677 ... I3LJR4 41781612
    975474 9g0a:A (3.1) BS05 ZN N/A GO:0003677 ... I3LJR4 41781612
    975475 9g0a:A (3.1) BS06 MG N/A GO:0003677 ... I3LJR4 41781612
    975476 9g0a:B (3.1) BS01 rna N/A GO:0001172 ... A0A0B8RVL1 41781612
    975477 9g0a:B (3.1) BS02 dna N/A GO:0001172 ... A0A0B8RVL1 41781612
    975478 9g0a:B (3.1) BS03 dna N/A GO:0001172 ... A0A0B8RVL1 41781612
    975479 9g0a:B (3.1) BS04 ZN N/A GO:0001172 ... A0A0B8RVL1 41781612
    975480 9g0a:C (3.1) BS01 ZN N/A GO:0003677 ... I3LCH3 41781612
    975481 9g0a:E (3.1) BS01 dna N/A GO:0003677 ... I3LSI7 41781612
    975482 9g0a:I (3.1) BS01 ZN N/A GO:0001193 ... P60899 41781612
    975483 9g0a:I (3.1) BS02 ZN N/A GO:0001193 ... P60899 41781612
    975484 9g0a:J (3.1) BS01 ZN N/A GO:0003677 ... A0A4X1VYD0 41781612
    975485 9g0a:L (3.1) BS01 ZN N/A GO:0001650 ... A0A4X1TRS6 41781612
    975486 9g0a:Z (3.1) BS01 dna N/A GO:0000122 ... O00267 41781612
    975487 9g0a:a (3.1) BS01 rna N/A GO:0003723 ... M9TI86 41781612
    975488 9g0a:a (3.1) BS02 rna N/A GO:0003723 ... M9TI86 41781612
    975489 9g0a:a (3.1) BS03 rna N/A GO:0003723 ... M9TI86 41781612
    975490 9g0a:a (3.1) BS04 MG N/A GO:0003723 ... M9TI86 41781612
    975491 9g0a:b (3.1) BS01 rna N/A GO:0000166 ... M9TLW3 41781612
    975492 9g0a:b (3.1) BS02 rna N/A GO:0000166 ... M9TLW3 41781612
    975493 9g0a:b (3.1) BS03 rna N/A GO:0000166 ... M9TLW3 41781612
    975494 9g0a:c (3.1) BS01 rna N/A GO:0001172 ... X5F427 41781612
    975495 9g0a:c (3.1) BS02 rna N/A GO:0001172 ... X5F427 41781612
    975496 9g0a:c (3.1) BS03 peptide N/A GO:0001172 ... X5F427 41781612
    975497 9g0a:c (3.1) BS04 G1G N/A GO:0001172 ... X5F427 41781612
    975498 9g0c:B (1.8) BS01 GNP N/A GO:0003924 ... P61026 N/A
    975499 9g0c:B (1.8) BS02 MG N/A GO:0003924 ... P61026 N/A
    975500 9g0d:C (2.05) BS01 GNP N/A GO:0003924 ... P61026 N/A
    975501 9g0d:C (2.05) BS02 MG N/A GO:0003924 ... P61026 N/A
    975502 9g0f:A (3.7) BS01 ANP N/A GO:0016887 ... A0ACD6BA40 40103227
    975503 9g0f:B (3.7) BS01 ANP N/A GO:0016887 ... A0ACD6BA40 40103227
    975504 9g0f:B (3.7) BS02 ANP N/A GO:0016887 ... A0ACD6BA40 40103227
    975505 9g0f:C (3.7) BS01 dna N/A GO:0016887 ... A0ACD6BA40 40103227
    975506 9g0f:C (3.7) BS02 ANP N/A GO:0016887 ... A0ACD6BA40 40103227
    975507 9g0f:C (3.7) BS03 ANP N/A GO:0016887 ... A0ACD6BA40 40103227
    975508 9g0f:D (3.7) BS01 dna N/A GO:0016887 ... A0ACD6BA40 40103227
    975509 9g0f:D (3.7) BS02 ANP N/A GO:0016887 ... A0ACD6BA40 40103227
    975510 9g0f:E (3.7) BS01 ANP N/A GO:0016887 ... A0ACD6BA40 40103227
    975511 9g0f:E (3.7) BS02 ANP N/A GO:0016887 ... A0ACD6BA40 40103227
    975512 9g0f:F (3.7) BS01 ANP N/A GO:0016887 ... A0ACD6BA40 40103227
    975513 9g0f:F (3.7) BS02 ANP N/A GO:0016887 ... A0ACD6BA40 40103227
    975514 9g0f:F (3.7) BS03 MG N/A GO:0016887 ... A0ACD6BA40 40103227
    975515 9g0f:G (3.7) BS01 ANP N/A GO:0016887 ... A0ACD6BA40 40103227
    975516 9g0f:G (3.7) BS02 ANP N/A GO:0016887 ... A0ACD6BA40 40103227
    975517 9g0f:G (3.7) BS03 MG N/A GO:0016887 ... A0ACD6BA40 40103227
    975518 9g0g:A (1.7) BS01 TJ9 N/A GO:0004016 ... Q45589 39177700
    975519 9g0g:B (1.7) BS01 TJ9 N/A GO:0004016 ... Q45589 39177700
    975520 9g0h:A (1.65) BS01 A1IHT N/A GO:0008233 ... P0DTC1 39319611
    975521 9g0h:B (1.65) BS01 MG N/A GO:0008233 ... P0DTC1 39319611
    975522 9g0i:A (1.67) BS01 A1IHV N/A GO:0008233 ... P0DTC1 39319611
    975523 9g0j:A (1.55) BS01 ZN N/A GO:0008237 ... A4INY2 41583563
    975524 9g0j:B (1.55) BS01 ZN N/A GO:0008237 ... A4INY2 41583563
    975525 9g0k:A (2.0) BS01 SAH N/A N/A A0A1W6R556 39121999
    975526 9g0k:B (2.0) BS01 SAH N/A N/A A0A1W6R556 39121999
    975527 9g0l:A (1.9) BS01 ZN N/A GO:0006511 ... Q8IUQ4 39910688
    975528 9g0l:A (1.9) BS02 ZN N/A GO:0006511 ... Q8IUQ4 39910688
    975529 9g0l:A (1.9) BS03 ZN N/A GO:0006511 ... Q8IUQ4 39910688
    975530 9g0o:A (3.3) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975531 9g0o:B (3.3) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975532 9g0o:C (3.3) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975533 9g0o:D (3.3) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975534 9g0o:E (3.3) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975535 9g0o:F (3.3) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975536 9g0o:a (3.3) BS01 GTP N/A GO:0005200 ... Q5EB23 39798564
    975537 9g0o:a (3.3) BS02 MG N/A GO:0005200 ... Q5EB23 39798564
    975538 9g0o:b (3.3) BS01 GTP N/A GO:0005200 ... Q5EB23 39798564
    975539 9g0o:b (3.3) BS02 MG N/A GO:0005200 ... Q5EB23 39798564
    975540 9g0o:c (3.3) BS01 MG N/A GO:0005200 ... Q5EB23 39798564
    975541 9g0o:c (3.3) BS02 GTP N/A GO:0005200 ... Q5EB23 39798564
    975542 9g0o:d (3.3) BS01 MG N/A GO:0005200 ... Q5EB23 39798564
    975543 9g0o:d (3.3) BS02 GTP N/A GO:0005200 ... Q5EB23 39798564
    975544 9g0o:e (3.3) BS01 MG N/A GO:0005200 ... Q5EB23 39798564
    975545 9g0o:e (3.3) BS02 GTP N/A GO:0005200 ... Q5EB23 39798564
    975546 9g0o:f (3.3) BS01 MG N/A GO:0005200 ... Q5EB23 39798564
    975547 9g0o:f (3.3) BS02 GTP N/A GO:0005200 ... Q5EB23 39798564
    975548 9g0p:A (3.0) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975549 9g0p:B (3.0) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975550 9g0p:C (3.0) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975551 9g0p:D (3.0) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975552 9g0p:E (3.0) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975553 9g0p:F (3.0) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975554 9g0p:a (3.0) BS01 GTP N/A GO:0000226 ... A0A8J0UQF0 39798564
    975555 9g0p:b (3.0) BS01 GTP N/A GO:0000226 ... A0A8J0UQF0 39798564
    975556 9g0p:c (3.0) BS01 GTP N/A GO:0000226 ... A0A8J0UQF0 39798564
    975557 9g0p:d (3.0) BS01 GTP N/A GO:0000226 ... A0A8J0UQF0 39798564
    975558 9g0p:e (3.0) BS01 GTP N/A GO:0000226 ... A0A8J0UQF0 39798564
    975559 9g0p:f (3.0) BS01 GTP N/A GO:0000226 ... A0A8J0UQF0 39798564
    975560 9g0q:A (3.2) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975561 9g0q:A (3.2) BS02 GTP N/A GO:0000226 ... P30883 39798564
    975562 9g0q:B (3.2) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975563 9g0q:B (3.2) BS02 GTP N/A GO:0000226 ... P30883 39798564
    975564 9g0q:C (3.2) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975565 9g0q:C (3.2) BS02 GTP N/A GO:0000226 ... P30883 39798564
    975566 9g0q:D (3.2) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975567 9g0q:D (3.2) BS02 GTP N/A GO:0000226 ... P30883 39798564
    975568 9g0q:E (3.2) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975569 9g0q:E (3.2) BS02 GTP N/A GO:0000226 ... P30883 39798564
    975570 9g0q:F (3.2) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975571 9g0q:F (3.2) BS02 GTP N/A GO:0000226 ... P30883 39798564
    975572 9g0q:a (3.2) BS01 GTP N/A GO:0000226 ... A0A8J0UQF0 39798564
    975573 9g0q:b (3.2) BS01 GTP N/A GO:0000226 ... A0A8J0UQF0 39798564
    975574 9g0q:c (3.2) BS01 GTP N/A GO:0000226 ... A0A8J0UQF0 39798564
    975575 9g0q:d (3.2) BS01 GTP N/A GO:0000226 ... A0A8J0UQF0 39798564
    975576 9g0q:e (3.2) BS01 GTP N/A GO:0000226 ... A0A8J0UQF0 39798564
    975577 9g0q:f (3.2) BS01 GTP N/A GO:0000226 ... A0A8J0UQF0 39798564
    975578 9g0r:A (3.1) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975579 9g0r:B (3.1) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975580 9g0r:C (3.1) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975581 9g0r:D (3.1) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975582 9g0r:E (3.1) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975583 9g0r:F (3.1) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975584 9g0r:a (3.1) BS01 GTP N/A GO:0000226 ... A0A8J0UQF0 39798564
    975585 9g0r:b (3.1) BS01 GTP N/A GO:0000226 ... A0A8J0UQF0 39798564
    975586 9g0r:c (3.1) BS01 GTP N/A GO:0000226 ... A0A8J0UQF0 39798564
    975587 9g0r:d (3.1) BS01 GTP N/A GO:0000226 ... A0A8J0UQF0 39798564
    975588 9g0r:e (3.1) BS01 GTP N/A GO:0000226 ... A0A8J0UQF0 39798564
    975589 9g0r:f (3.1) BS01 GTP N/A GO:0000226 ... A0A8J0UQF0 39798564
    975590 9g0s:A (3.6) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975591 9g0s:B (3.6) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975592 9g0s:C (3.6) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975593 9g0s:D (3.6) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975594 9g0s:E (3.6) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975595 9g0s:F (3.6) BS01 GDP N/A GO:0000226 ... P30883 39798564
    975596 9g0s:a (3.6) BS01 MG N/A GO:0005200 ... Q5EB23 39798564
    975597 9g0s:a (3.6) BS02 GTP N/A GO:0005200 ... Q5EB23 39798564
    975598 9g0s:b (3.6) BS01 MG N/A GO:0005200 ... Q5EB23 39798564
    975599 9g0s:b (3.6) BS02 GTP N/A GO:0005200 ... Q5EB23 39798564
    975600 9g0s:c (3.6) BS01 MG N/A GO:0005200 ... Q5EB23 39798564

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).