SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    975801 9g1z:G (3.1) BS01 rna N/A GO:0003723 ... Q5AG43 40273100
    975802 9g1z:H (3.1) BS01 rna N/A GO:0003674 ... A0A1D8PL99 40273100
    975803 9g1z:I (3.1) BS01 rna N/A GO:0003735 ... Q5AJ93 40273100
    975804 9g1z:J (3.1) BS01 rna N/A GO:0002181 ... Q59T44 40273100
    975805 9g1z:J (3.1) BS02 rna N/A GO:0002181 ... Q59T44 40273100
    975806 9g1z:K (3.1) BS01 rna N/A GO:0003723 ... A0A1D8PGY8 40273100
    975807 9g1z:L (3.1) BS01 rna N/A GO:0003674 ... A0A1D8PI15 40273100
    975808 9g1z:M (3.1) BS01 rna N/A GO:0003674 ... A0A1D8PN83 40273100
    975809 9g1z:N (3.1) BS01 rna N/A GO:0000028 ... Q5ADQ6 40273100
    975810 9g1z:O (3.1) BS01 rna N/A GO:0000462 ... A0A1D8PPE0 40273100
    975811 9g1z:P (3.1) BS01 rna N/A GO:0000028 ... A0A1D8PDT3 40273100
    975812 9g1z:Q (3.1) BS01 rna N/A GO:0003723 ... A0A1D8PK22 40273100
    975813 9g1z:R (3.1) BS01 rna N/A GO:0000462 ... A0A1D8PCW6 40273100
    975814 9g1z:S (3.1) BS01 rna N/A GO:0000028 ... A0A1D8PEY9 40273100
    975815 9g1z:T (3.1) BS01 rna N/A GO:0000054 ... A0A1D8PQQ5 40273100
    975816 9g1z:U (3.1) BS01 rna N/A GO:0003674 ... A0A1D8PK61 40273100
    975817 9g1z:V (3.1) BS01 rna N/A GO:0000462 ... Q5A389 40273100
    975818 9g1z:W (3.1) BS01 rna N/A GO:0000447 ... A0A1D8PCG7 40273100
    975819 9g1z:X (3.1) BS01 rna N/A GO:0003674 ... Q96W54 40273100
    975820 9g1z:Y (3.1) BS01 rna N/A GO:0003674 ... A0A1D8PDU3 40273100
    975821 9g1z:Z (3.1) BS01 rna N/A GO:0002181 ... Q5A7K0 40273100
    975822 9g1z:a (3.1) BS01 rna N/A GO:0003674 ... A0A1D8PNQ6 40273100
    975823 9g1z:b (3.1) BS01 rna N/A GO:0003729 ... Q5ALV6 40273100
    975824 9g1z:b (3.1) BS02 ZN N/A GO:0003729 ... Q5ALV6 40273100
    975825 9g1z:c (3.1) BS01 rna N/A GO:0003674 ... A0A1D8PTI7 40273100
    975826 9g1z:d (3.1) BS01 rna N/A GO:0000028 ... A0A1D8PQN0 40273100
    975827 9g1z:e (3.1) BS01 rna N/A GO:0002181 ... A0A1D8PTR4 40273100
    975828 9g1z:f (3.1) BS01 rna N/A GO:0003735 ... A0A1D8PSK2 40273100
    975829 9g1z:g (3.1) BS01 rna N/A GO:0000028 ... Q5A109 40273100
    975830 9g1z:g (3.1) BS02 ZN N/A GO:0000028 ... Q5A109 40273100
    975831 9g1z:h (3.1) BS01 rna N/A GO:0001403 ... P83774 40273100
    975832 9g1z:j (3.1) BS01 rna N/A GO:0002181 ... A0A1D8PF08 40273100
    975833 9g1z:j (3.1) BS02 rna N/A GO:0002181 ... A0A1D8PF08 40273100
    975834 9g1z:j (3.1) BS03 YMZ N/A GO:0002181 ... A0A1D8PF08 40273100
    975835 9g1z:k (3.1) BS01 rna N/A GO:0000027 ... Q59LS1 40273100
    975836 9g1z:l (3.1) BS01 rna N/A GO:0003723 ... A0A1D8PFV1 40273100
    975837 9g1z:l (3.1) BS02 rna N/A GO:0003723 ... A0A1D8PFV1 40273100
    975838 9g1z:m (3.1) BS01 rna N/A GO:0000027 ... Q5AGZ7 40273100
    975839 9g1z:m (3.1) BS02 rna N/A GO:0000027 ... Q5AGZ7 40273100
    975840 9g1z:n (3.1) BS01 rna N/A GO:0002181 ... A0A1D8PCX8 40273100
    975841 9g1z:o (3.1) BS01 rna N/A GO:0000463 ... A0A1D8PDL6 40273100
    975842 9g1z:o (3.1) BS02 rna N/A GO:0000463 ... A0A1D8PDL6 40273100
    975843 9g1z:p (3.1) BS01 rna N/A GO:0000470 ... Q5ANA1 40273100
    975844 9g1z:p (3.1) BS02 rna N/A GO:0000470 ... Q5ANA1 40273100
    975845 9g1z:q (3.1) BS01 rna N/A GO:0002181 ... Q5AEN2 40273100
    975846 9g1z:r (3.1) BS01 rna N/A GO:0003735 ... Q5AIB8 40273100
    975847 9g1z:r (3.1) BS02 rna N/A GO:0003735 ... Q5AIB8 40273100
    975848 9g1z:s (3.1) BS01 rna N/A GO:0003723 ... A0A1D8PHW1 40273100
    975849 9g1z:s (3.1) BS02 rna N/A GO:0003723 ... A0A1D8PHW1 40273100
    975850 9g1z:t (3.1) BS01 rna N/A GO:0003723 ... O59931 40273100
    975851 9g1z:t (3.1) BS02 rna N/A GO:0003723 ... O59931 40273100
    975852 9g1z:u (3.1) BS01 rna N/A GO:0003723 ... A0A1D8PFL9 40273100
    975853 9g1z:v (3.1) BS01 rna N/A GO:0002181 ... Q5A6R1 40273100
    975854 9g1z:v (3.1) BS02 rna N/A GO:0002181 ... Q5A6R1 40273100
    975855 9g1z:w (3.1) BS01 rna N/A GO:0003729 ... Q5AB87 40273100
    975856 9g1z:x (3.1) BS01 rna N/A GO:0002181 ... Q59TE0 40273100
    975857 9g1z:x (3.1) BS02 rna N/A GO:0002181 ... Q59TE0 40273100
    975858 9g1z:y (3.1) BS01 rna N/A GO:0002181 ... A0A1D8PK43 40273100
    975859 9g1z:z (3.1) BS01 rna N/A GO:0003723 ... A0A1D8PK40 40273100
    975860 9g1z:z (3.1) BS02 rna N/A GO:0003723 ... A0A1D8PK40 40273100
    975861 9g23:A (3.4) BS01 rna N/A GO:0003677 ... P10964 40480971
    975862 9g23:A (3.4) BS02 dna N/A GO:0003677 ... P10964 40480971
    975863 9g23:A (3.4) BS03 dna N/A GO:0003677 ... P10964 40480971
    975864 9g23:A (3.4) BS04 ZN N/A GO:0003677 ... P10964 40480971
    975865 9g23:A (3.4) BS05 ZN N/A GO:0003677 ... P10964 40480971
    975866 9g23:A (3.4) BS06 MG N/A GO:0003677 ... P10964 40480971
    975867 9g23:A (3.4) BS07 APC N/A GO:0003677 ... P10964 40480971
    975868 9g23:B (3.4) BS01 rna N/A GO:0003677 ... P22138 40480971
    975869 9g23:B (3.4) BS02 dna N/A GO:0003677 ... P22138 40480971
    975870 9g23:B (3.4) BS03 dna N/A GO:0003677 ... P22138 40480971
    975871 9g23:B (3.4) BS04 ZN N/A GO:0003677 ... P22138 40480971
    975872 9g23:B (3.4) BS05 APC N/A GO:0003677 ... P22138 40480971
    975873 9g23:I (3.4) BS01 ZN N/A GO:0000122 ... P32529 40480971
    975874 9g23:J (3.4) BS01 ZN N/A GO:0001172 ... P22139 40480971
    975875 9g23:L (3.4) BS01 ZN N/A GO:0001172 ... P40422 40480971
    975876 9g24:A (3.5) BS01 rna N/A GO:0003677 ... P10964 40480971
    975877 9g24:A (3.5) BS02 dna N/A GO:0003677 ... P10964 40480971
    975878 9g24:A (3.5) BS03 dna N/A GO:0003677 ... P10964 40480971
    975879 9g24:A (3.5) BS04 ZN N/A GO:0003677 ... P10964 40480971
    975880 9g24:A (3.5) BS05 ZN N/A GO:0003677 ... P10964 40480971
    975881 9g24:A (3.5) BS06 MG N/A GO:0003677 ... P10964 40480971
    975882 9g24:B (3.5) BS01 dna N/A GO:0003677 ... P22138 40480971
    975883 9g24:B (3.5) BS02 dna N/A GO:0003677 ... P22138 40480971
    975884 9g24:B (3.5) BS03 ZN N/A GO:0003677 ... P22138 40480971
    975885 9g24:I (3.5) BS01 ZN N/A GO:0000122 ... P32529 40480971
    975886 9g24:J (3.5) BS01 ZN N/A GO:0001172 ... P22139 40480971
    975887 9g24:L (3.5) BS01 ZN N/A GO:0001172 ... P40422 40480971
    975888 9g25:A (2.89) BS01 rna N/A GO:0000154 ... P33322 40399280
    975889 9g25:A (2.89) BS02 rna N/A GO:0000154 ... P33322 40399280
    975890 9g25:B (2.89) BS01 rna N/A GO:0000454 ... Q6Q547 40399280
    975891 9g25:C (2.89) BS01 rna N/A GO:0000454 ... P28007 40399280
    975892 9g25:D (2.89) BS01 rna N/A GO:0000454 ... P32495 40399280
    975893 9g25:E (2.89) BS01 rna N/A GO:0000154 ... P33322 40399280
    975894 9g25:F (2.89) BS01 rna N/A GO:0000454 ... Q6Q547 40399280
    975895 9g25:G (2.89) BS01 rna N/A GO:0000454 ... P32495 40399280
    975896 9g25:H (2.89) BS01 rna N/A GO:0000447 ... P25586 40399280
    975897 9g25:H (2.89) BS02 rna N/A GO:0000447 ... P25586 40399280
    975898 9g25:I (2.89) BS01 rna N/A GO:0000447 ... P42846 40399280
    975899 9g25:I (2.89) BS02 rna N/A GO:0000447 ... P42846 40399280
    975900 9g25:J (2.89) BS01 rna N/A GO:0000462 ... P05756 40399280
    975901 9g25:K (2.89) BS01 rna N/A GO:0000447 ... Q12339 40399280
    975902 9g25:K (2.89) BS02 rna N/A GO:0000447 ... Q12339 40399280
    975903 9g25:K (2.89) BS03 ZN N/A GO:0000447 ... Q12339 40399280
    975904 9g25:L (2.89) BS01 rna N/A GO:0000028 ... P06367 40399280
    975905 9g26:A (3.4) BS01 rna N/A GO:0003677 ... P10964 40480971
    975906 9g26:A (3.4) BS02 dna N/A GO:0003677 ... P10964 40480971
    975907 9g26:A (3.4) BS03 dna N/A GO:0003677 ... P10964 40480971
    975908 9g26:A (3.4) BS04 MG N/A GO:0003677 ... P10964 40480971
    975909 9g26:A (3.4) BS05 ZN N/A GO:0003677 ... P10964 40480971
    975910 9g26:A (3.4) BS06 ZN N/A GO:0003677 ... P10964 40480971
    975911 9g26:B (3.4) BS01 rna N/A GO:0003677 ... P22138 40480971
    975912 9g26:B (3.4) BS02 dna N/A GO:0003677 ... P22138 40480971
    975913 9g26:B (3.4) BS03 dna N/A GO:0003677 ... P22138 40480971
    975914 9g26:B (3.4) BS04 ZN N/A GO:0003677 ... P22138 40480971
    975915 9g26:I (3.4) BS01 ZN N/A GO:0000122 ... P32529 40480971
    975916 9g26:J (3.4) BS01 ZN N/A GO:0001172 ... P22139 40480971
    975917 9g26:L (3.4) BS01 ZN N/A GO:0001172 ... P40422 40480971
    975918 9g27:A (2.8) BS01 peptide N/A GO:0003677 ... P10964 40480971
    975919 9g27:A (2.8) BS02 rna N/A GO:0003677 ... P10964 40480971
    975920 9g27:A (2.8) BS03 dna N/A GO:0003677 ... P10964 40480971
    975921 9g27:A (2.8) BS04 dna N/A GO:0003677 ... P10964 40480971
    975922 9g27:A (2.8) BS05 ZN N/A GO:0003677 ... P10964 40480971
    975923 9g27:A (2.8) BS06 ZN N/A GO:0003677 ... P10964 40480971
    975924 9g27:B (2.8) BS01 rna N/A GO:0003677 ... P22138 40480971
    975925 9g27:B (2.8) BS02 dna N/A GO:0003677 ... P22138 40480971
    975926 9g27:B (2.8) BS03 dna N/A GO:0003677 ... P22138 40480971
    975927 9g27:B (2.8) BS04 ZN N/A GO:0003677 ... P22138 40480971
    975928 9g27:E (2.8) BS01 dna N/A GO:0001172 ... P20434 40480971
    975929 9g27:F (2.8) BS01 peptide N/A GO:0001172 ... P20435 40480971
    975930 9g27:G (2.8) BS01 peptide N/A GO:0003899 ... P46669 40480971
    975931 9g27:I (2.8) BS01 ZN N/A GO:0000122 ... P32529 40480971
    975932 9g27:J (2.8) BS01 ZN N/A GO:0001172 ... P22139 40480971
    975933 9g27:L (2.8) BS01 ZN N/A GO:0001172 ... P40422 40480971
    975934 9g28:A (3.18) BS01 rna N/A GO:0000154 ... P33322 40399280
    975935 9g28:A (3.18) BS02 rna N/A GO:0000154 ... P33322 40399280
    975936 9g28:B (3.18) BS01 rna N/A GO:0000454 ... Q6Q547 40399280
    975937 9g28:D (3.18) BS01 rna N/A GO:0000454 ... P32495 40399280
    975938 9g28:E (3.18) BS01 rna N/A GO:0000154 ... P33322 40399280
    975939 9g28:F (3.18) BS01 rna N/A GO:0000454 ... Q6Q547 40399280
    975940 9g28:G (3.18) BS01 rna N/A GO:0000454 ... P32495 40399280
    975941 9g28:H (3.18) BS01 rna N/A GO:0000447 ... P25586 40399280
    975942 9g28:H (3.18) BS02 rna N/A GO:0000447 ... P25586 40399280
    975943 9g28:I (3.18) BS01 rna N/A GO:0000447 ... P42846 40399280
    975944 9g28:I (3.18) BS02 rna N/A GO:0000447 ... P42846 40399280
    975945 9g28:J (3.18) BS01 rna N/A GO:0000462 ... P05756 40399280
    975946 9g28:L (3.18) BS01 rna N/A GO:0000028 ... P06367 40399280
    975947 9g29:A (3.3) BS01 peptide N/A GO:0003677 ... P10964 40480971
    975948 9g29:A (3.3) BS02 rna N/A GO:0003677 ... P10964 40480971
    975949 9g29:A (3.3) BS03 dna N/A GO:0003677 ... P10964 40480971
    975950 9g29:A (3.3) BS04 MG N/A GO:0003677 ... P10964 40480971
    975951 9g29:A (3.3) BS05 ZN N/A GO:0003677 ... P10964 40480971
    975952 9g29:A (3.3) BS06 ZN N/A GO:0003677 ... P10964 40480971
    975953 9g29:B (3.3) BS01 rna N/A GO:0003677 ... P22138 40480971
    975954 9g29:B (3.3) BS02 dna N/A GO:0003677 ... P22138 40480971
    975955 9g29:B (3.3) BS03 dna N/A GO:0003677 ... P22138 40480971
    975956 9g29:B (3.3) BS04 ZN N/A GO:0003677 ... P22138 40480971
    975957 9g29:E (3.3) BS01 dna N/A GO:0001172 ... P20434 40480971
    975958 9g29:F (3.3) BS01 peptide N/A GO:0001172 ... P20435 40480971
    975959 9g29:G (3.3) BS01 peptide N/A GO:0003899 ... P46669 40480971
    975960 9g29:I (3.3) BS01 ZN N/A GO:0000122 ... P32529 40480971
    975961 9g29:I (3.3) BS02 ZN N/A GO:0000122 ... P32529 40480971
    975962 9g29:J (3.3) BS01 ZN N/A GO:0001172 ... P22139 40480971
    975963 9g29:L (3.3) BS01 ZN N/A GO:0001172 ... P40422 40480971
    975964 9g2b:A (3.2) BS01 peptide N/A GO:0003677 ... P10964 40480971
    975965 9g2b:A (3.2) BS02 rna N/A GO:0003677 ... P10964 40480971
    975966 9g2b:A (3.2) BS03 dna N/A GO:0003677 ... P10964 40480971
    975967 9g2b:A (3.2) BS04 ZN N/A GO:0003677 ... P10964 40480971
    975968 9g2b:A (3.2) BS05 ZN N/A GO:0003677 ... P10964 40480971
    975969 9g2b:A (3.2) BS06 MG N/A GO:0003677 ... P10964 40480971
    975970 9g2b:B (3.2) BS01 rna N/A GO:0003677 ... P22138 40480971
    975971 9g2b:B (3.2) BS02 dna N/A GO:0003677 ... P22138 40480971
    975972 9g2b:B (3.2) BS03 dna N/A GO:0003677 ... P22138 40480971
    975973 9g2b:B (3.2) BS04 ZN N/A GO:0003677 ... P22138 40480971
    975974 9g2b:F (3.2) BS01 peptide N/A GO:0001172 ... P20435 40480971
    975975 9g2b:G (3.2) BS01 peptide N/A GO:0003899 ... P46669 40480971
    975976 9g2b:I (3.2) BS01 ZN N/A GO:0000122 ... P32529 40480971
    975977 9g2b:J (3.2) BS01 ZN N/A GO:0001172 ... P22139 40480971
    975978 9g2b:L (3.2) BS01 ZN N/A GO:0001172 ... P40422 40480971
    975979 9g2c:A (3.5) BS01 dna N/A GO:0003677 ... P10964 40480971
    975980 9g2c:A (3.5) BS02 dna N/A GO:0003677 ... P10964 40480971
    975981 9g2c:B (3.5) BS01 dna N/A GO:0003677 ... P22138 40480971
    975982 9g2c:B (3.5) BS02 dna N/A GO:0003677 ... P22138 40480971
    975983 9g2c:B (3.5) BS03 ZN N/A GO:0003677 ... P22138 40480971
    975984 9g2c:I (3.5) BS01 ZN N/A GO:0000122 ... P32529 40480971
    975985 9g2c:J (3.5) BS01 ZN N/A GO:0001172 ... P22139 40480971
    975986 9g2c:L (3.5) BS01 ZN N/A GO:0001172 ... P40422 40480971
    975987 9g2f:B (2.8) BS01 MAN N/A N/A A0A0A0MQB7 N/A
    975988 9g2k:A (3.14) BS01 AOV N/A GO:0005524 ... G7CBF5 39880813
    975989 9g2k:A (3.14) BS02 MG N/A GO:0005524 ... G7CBF5 39880813
    975990 9g2k:A (3.14) BS03 ZN N/A GO:0005524 ... G7CBF5 39880813
    975991 9g2k:A (3.14) BS04 AOV N/A GO:0005524 ... G7CBF5 39880813
    975992 9g2k:B (3.14) BS01 AOV N/A GO:0005524 ... G7CBF6 39880813
    975993 9g2k:B (3.14) BS02 AOV N/A GO:0005524 ... G7CBF6 39880813
    975994 9g2k:B (3.14) BS03 MG N/A GO:0005524 ... G7CBF6 39880813
    975995 9g2l:A (3.23) BS01 ZN N/A GO:0005524 ... G7CBF5 39880813
    975996 9g2m:A (3.23) BS01 AOV N/A GO:0005524 ... G7CBF5 39880813
    975997 9g2m:A (3.23) BS02 MG N/A GO:0005524 ... G7CBF5 39880813
    975998 9g2m:A (3.23) BS03 ZN N/A GO:0005524 ... G7CBF5 39880813
    975999 9g2m:A (3.23) BS04 AOV N/A GO:0005524 ... G7CBF5 39880813
    976000 9g2m:B (3.23) BS01 AOV N/A GO:0005524 ... G7CBF6 39880813

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).