SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4872 4873 4874 4875 4876 4877 4878 4879 4880 4881 4882 4883 4884 4885 4886 4887 4888 4889 4890 4891 4892 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    976201 9g33:UK (3.05) BS02 rna N/A GO:0000447 ... P34247 40399280
    976202 9g33:UK (3.05) BS03 rna N/A GO:0000447 ... P34247 40399280
    976203 9g33:UL (3.05) BS01 rna N/A GO:0000447 ... Q12220 40399280
    976204 9g33:UM (3.05) BS01 rna N/A GO:0000447 ... Q05946 40399280
    976205 9g33:UN (3.05) BS01 rna N/A GO:0000447 ... Q04500 40399280
    976206 9g33:UN (3.05) BS02 rna N/A GO:0000447 ... Q04500 40399280
    976207 9g33:UO (3.05) BS01 rna N/A GO:0000462 ... Q04305 40399280
    976208 9g33:UO (3.05) BS02 rna N/A GO:0000462 ... Q04305 40399280
    976209 9g33:UP (3.05) BS01 rna N/A GO:0000447 ... Q08492 40399280
    976210 9g33:UQ (3.05) BS01 rna N/A GO:0000462 ... Q02931 40399280
    976211 9g33:UQ (3.05) BS02 rna N/A GO:0000462 ... Q02931 40399280
    976212 9g33:UR (3.05) BS01 rna N/A GO:0000292 ... P40362 40399280
    976213 9g33:UR (3.05) BS02 rna N/A GO:0000292 ... P40362 40399280
    976214 9g33:US (3.05) BS01 rna N/A GO:0000028 ... Q06512 40399280
    976215 9g33:UT (3.05) BS01 rna N/A GO:0000447 ... P35194 40399280
    976216 9g33:UT (3.05) BS02 rna N/A GO:0000447 ... P35194 40399280
    976217 9g33:UU (3.05) BS01 rna N/A GO:0003674 ... Q06078 40399280
    976218 9g33:UU (3.05) BS02 rna N/A GO:0003674 ... Q06078 40399280
    976219 9g33:UX (3.05) BS01 rna N/A GO:0000447 ... Q05498 40399280
    976220 9g33:UX (3.05) BS02 rna N/A GO:0000447 ... Q05498 40399280
    976221 9g33:UX (3.05) BS03 ZN N/A GO:0000447 ... Q05498 40399280
    976222 9g33:UZ (3.05) BS01 rna N/A GO:0000462 ... P36144 40399280
    976223 9g33:UZ (3.05) BS02 rna N/A GO:0000462 ... P36144 40399280
    976224 9g34:A (1.3) BS01 017 N/A GO:0004190 ... P11838 N/A
    976225 9g34:B (1.3) BS01 017 N/A GO:0004190 ... P11838 N/A
    976226 9g35:A (1.5) BS01 AB1 N/A GO:0004190 ... P11838 N/A
    976227 9g36:A (3.21) BS01 ADP N/A GO:0005524 ... G7CBF5 39880813
    976228 9g36:B (3.21) BS01 ADP N/A GO:0005524 ... G7CBF6 39880813
    976229 9g37:A (3.0) BS01 ATP N/A GO:0005524 ... G7CBF5 39880813
    976230 9g37:A (3.0) BS02 MG N/A GO:0005524 ... G7CBF5 39880813
    976231 9g37:A (3.0) BS03 ATP N/A GO:0005524 ... G7CBF5 39880813
    976232 9g37:B (3.0) BS01 ATP N/A GO:0005524 ... G7CBF6 39880813
    976233 9g37:B (3.0) BS02 MG N/A GO:0005524 ... G7CBF6 39880813
    976234 9g37:B (3.0) BS03 ATP N/A GO:0005524 ... G7CBF6 39880813
    976235 9g38:A (1.2) BS01 A1IH2 N/A GO:0004064 ... P00918 39711099
    976236 9g38:A (1.2) BS02 ZN N/A GO:0004064 ... P00918 39711099
    976237 9g3k:A (1.55) BS01 CA N/A GO:0030246 ... Q9HYN5 40279549
    976238 9g3k:A (1.55) BS02 CA N/A GO:0030246 ... Q9HYN5 40279549
    976239 9g3k:B (1.55) BS01 CA N/A GO:0030246 ... Q9HYN5 40279549
    976240 9g3k:B (1.55) BS02 CA N/A GO:0030246 ... Q9HYN5 40279549
    976241 9g3k:C (1.55) BS01 CA N/A GO:0030246 ... Q9HYN5 40279549
    976242 9g3k:C (1.55) BS02 CA N/A GO:0030246 ... Q9HYN5 40279549
    976243 9g3k:D (1.55) BS01 CA N/A GO:0030246 ... Q9HYN5 40279549
    976244 9g3k:D (1.55) BS02 CA N/A GO:0030246 ... Q9HYN5 40279549
    976245 9g3k:D (1.55) BS03 R7E N/A GO:0030246 ... Q9HYN5 40279549
    976246 9g3l:A (1.739) BS01 CA N/A GO:0030246 ... Q9HYN5 40279549
    976247 9g3l:A (1.739) BS02 CA N/A GO:0030246 ... Q9HYN5 40279549
    976248 9g3l:A (1.739) BS03 R7E N/A GO:0030246 ... Q9HYN5 40279549
    976249 9g3l:B (1.739) BS01 CA N/A GO:0030246 ... Q9HYN5 40279549
    976250 9g3l:B (1.739) BS02 CA N/A GO:0030246 ... Q9HYN5 40279549
    976251 9g3l:B (1.739) BS03 A1IH4 N/A GO:0030246 ... Q9HYN5 40279549
    976252 9g3l:C (1.739) BS01 CA N/A GO:0030246 ... Q9HYN5 40279549
    976253 9g3l:C (1.739) BS02 CA N/A GO:0030246 ... Q9HYN5 40279549
    976254 9g3l:C (1.739) BS03 A1IH4 N/A GO:0030246 ... Q9HYN5 40279549
    976255 9g3l:D (1.739) BS01 CA N/A GO:0030246 ... Q9HYN5 40279549
    976256 9g3l:D (1.739) BS02 CA N/A GO:0030246 ... Q9HYN5 40279549
    976257 9g3l:D (1.739) BS03 A1IH4 N/A GO:0030246 ... Q9HYN5 40279549
    976258 9g3r:A (1.7) BS01 YIO N/A GO:0005737 ... Q05097 39535852
    976259 9g3r:A (1.7) BS02 CA N/A GO:0005737 ... Q05097 39535852
    976260 9g3r:B (1.7) BS01 YIO N/A GO:0005737 ... Q05097 39535852
    976261 9g3r:B (1.7) BS02 CA N/A GO:0005737 ... Q05097 39535852
    976262 9g3r:C (1.7) BS01 CA N/A GO:0005737 ... Q05097 39535852
    976263 9g3r:C (1.7) BS02 YIO N/A GO:0005737 ... Q05097 39535852
    976264 9g3r:D (1.7) BS01 YIO N/A GO:0005737 ... Q05097 39535852
    976265 9g3r:D (1.7) BS02 CA N/A GO:0005737 ... Q05097 39535852
    976266 9g3r:E (1.7) BS01 CA N/A GO:0005737 ... Q05097 39535852
    976267 9g3r:E (1.7) BS02 YIO N/A GO:0005737 ... Q05097 39535852
    976268 9g3r:F (1.7) BS01 CA N/A GO:0005737 ... Q05097 39535852
    976269 9g3r:F (1.7) BS02 YIO N/A GO:0005737 ... Q05097 39535852
    976270 9g3r:G (1.7) BS01 YIO N/A GO:0005737 ... Q05097 39535852
    976271 9g3r:G (1.7) BS02 CA N/A GO:0005737 ... Q05097 39535852
    976272 9g3r:H (1.7) BS01 YIO N/A GO:0005737 ... Q05097 39535852
    976273 9g3r:H (1.7) BS02 CA N/A GO:0005737 ... Q05097 39535852
    976274 9g3s:A (1.85) BS01 FUC N/A GO:0030246 ... Q9HYN5 39535852
    976275 9g3s:A (1.85) BS02 CA N/A GO:0030246 ... Q9HYN5 39535852
    976276 9g3s:A (1.85) BS03 CA N/A GO:0030246 ... Q9HYN5 39535852
    976277 9g3s:B (1.85) BS01 FUC N/A GO:0030246 ... Q9HYN5 39535852
    976278 9g3s:B (1.85) BS02 YIO N/A GO:0030246 ... Q9HYN5 39535852
    976279 9g3s:B (1.85) BS03 CA N/A GO:0030246 ... Q9HYN5 39535852
    976280 9g3s:B (1.85) BS04 CA N/A GO:0030246 ... Q9HYN5 39535852
    976281 9g3s:C (1.85) BS01 YIO N/A GO:0030246 ... Q9HYN5 39535852
    976282 9g3s:C (1.85) BS02 FUC N/A GO:0030246 ... Q9HYN5 39535852
    976283 9g3s:C (1.85) BS03 CA N/A GO:0030246 ... Q9HYN5 39535852
    976284 9g3s:C (1.85) BS04 CA N/A GO:0030246 ... Q9HYN5 39535852
    976285 9g3s:D (1.85) BS01 YIO N/A GO:0030246 ... Q9HYN5 39535852
    976286 9g3s:D (1.85) BS02 FUC N/A GO:0030246 ... Q9HYN5 39535852
    976287 9g3s:D (1.85) BS03 CA N/A GO:0030246 ... Q9HYN5 39535852
    976288 9g3s:D (1.85) BS04 CA N/A GO:0030246 ... Q9HYN5 39535852
    976289 9g3s:E (1.85) BS01 FUC N/A GO:0030246 ... Q9HYN5 39535852
    976290 9g3s:E (1.85) BS02 CA N/A GO:0030246 ... Q9HYN5 39535852
    976291 9g3s:E (1.85) BS03 CA N/A GO:0030246 ... Q9HYN5 39535852
    976292 9g3s:F (1.85) BS01 YIO N/A GO:0030246 ... Q9HYN5 39535852
    976293 9g3s:F (1.85) BS02 FUC N/A GO:0030246 ... Q9HYN5 39535852
    976294 9g3s:F (1.85) BS03 CA N/A GO:0030246 ... Q9HYN5 39535852
    976295 9g3s:F (1.85) BS04 CA N/A GO:0030246 ... Q9HYN5 39535852
    976296 9g3s:G (1.85) BS01 YIO N/A GO:0030246 ... Q9HYN5 39535852
    976297 9g3s:G (1.85) BS02 FUC N/A GO:0030246 ... Q9HYN5 39535852
    976298 9g3s:G (1.85) BS03 CA N/A GO:0030246 ... Q9HYN5 39535852
    976299 9g3s:G (1.85) BS04 CA N/A GO:0030246 ... Q9HYN5 39535852
    976300 9g3s:H (1.85) BS01 YIO N/A GO:0030246 ... Q9HYN5 39535852
    976301 9g3s:H (1.85) BS02 FUC N/A GO:0030246 ... Q9HYN5 39535852
    976302 9g3s:H (1.85) BS03 CA N/A GO:0030246 ... Q9HYN5 39535852
    976303 9g3s:H (1.85) BS04 CA N/A GO:0030246 ... Q9HYN5 39535852
    976304 9g3t:A (1.6) BS01 ZN N/A GO:0008237 ... A4INY2 41583563
    976305 9g3t:B (1.6) BS01 ZN N/A GO:0008237 ... A4INY2 41583563
    976306 9g3w:A (1.8) BS01 MNB N/A GO:0002088 ... P07320 N/A
    976307 9g3w:A (1.8) BS02 MNB N/A GO:0002088 ... P07320 N/A
    976308 9g3w:A (1.8) BS03 MNB N/A GO:0002088 ... P07320 N/A
    976309 9g3w:X (1.8) BS01 MNB N/A GO:0002088 ... P07320 N/A
    976310 9g3w:X (1.8) BS02 MNB N/A GO:0002088 ... P07320 N/A
    976311 9g3w:X (1.8) BS03 MNB N/A GO:0002088 ... P07320 N/A
    976312 9g41:B (3.48) BS01 MAN N/A N/A A0A0A0MQB7 N/A
    976313 9g43:A (1.2) BS01 peptide N/A N/A A0A024GZ97 N/A
    976314 9g43:A (1.2) BS02 CA N/A N/A A0A024GZ97 N/A
    976315 9g44:A (3.2) BS01 dna N/A N/A A4Y6G0 N/A
    976316 9g44:A (3.2) BS02 MG N/A N/A A4Y6G0 N/A
    976317 9g44:A (3.2) BS03 MG N/A N/A A4Y6G0 N/A
    976318 9g44:B (3.2) BS01 rna N/A N/A A4Y6G2 N/A
    976319 9g44:B (3.2) BS02 dna N/A N/A A4Y6G2 N/A
    976320 9g44:B (3.2) BS03 dna N/A N/A A4Y6G2 N/A
    976321 9g44:C (3.2) BS01 rna N/A N/A A4Y6G3 N/A
    976322 9g44:D (3.2) BS01 rna N/A N/A A4Y6G1 N/A
    976323 9g44:E (3.2) BS01 rna N/A N/A A4Y6G1 N/A
    976324 9g44:E (3.2) BS02 dna N/A N/A A4Y6G1 N/A
    976325 9g44:F (3.2) BS01 rna N/A N/A A4Y6G1 N/A
    976326 9g44:F (3.2) BS02 dna N/A N/A A4Y6G1 N/A
    976327 9g44:G (3.2) BS01 rna N/A N/A A4Y6G1 N/A
    976328 9g44:G (3.2) BS02 dna N/A N/A A4Y6G1 N/A
    976329 9g44:G (3.2) BS03 dna N/A N/A A4Y6G1 N/A
    976330 9g44:H (3.2) BS01 rna N/A N/A A4Y6G1 N/A
    976331 9g44:H (3.2) BS02 dna N/A N/A A4Y6G1 N/A
    976332 9g44:H (3.2) BS03 dna N/A N/A A4Y6G1 N/A
    976333 9g44:I (3.2) BS01 rna N/A N/A A4Y6G1 N/A
    976334 9g44:I (3.2) BS02 dna N/A N/A A4Y6G1 N/A
    976335 9g44:I (3.2) BS03 dna N/A N/A A4Y6G1 N/A
    976336 9g45:A (1.6) BS01 PA5 N/A GO:0004347 ... P83780 41532565
    976337 9g45:A (1.6) BS02 A1IH9 N/A GO:0004347 ... P83780 41532565
    976338 9g45:B (1.6) BS01 A1IH9 N/A GO:0004347 ... P83780 41532565
    976339 9g45:B (1.6) BS02 PA5 N/A GO:0004347 ... P83780 41532565
    976340 9g46:A (1.44) BS01 PA5 N/A GO:0004347 ... P83780 41532565
    976341 9g46:A (1.44) BS02 A1IIA N/A GO:0004347 ... P83780 41532565
    976342 9g46:B (1.44) BS01 PA5 N/A GO:0004347 ... P83780 41532565
    976343 9g46:B (1.44) BS02 A1IIA N/A GO:0004347 ... P83780 41532565
    976344 9g47:A (1.51) BS01 PA5 N/A GO:0004347 ... P83780 41532565
    976345 9g47:A (1.51) BS02 A1IIC N/A GO:0004347 ... P83780 41532565
    976346 9g47:B (1.51) BS01 A1IIC N/A GO:0004347 ... P83780 41532565
    976347 9g47:B (1.51) BS02 PA5 N/A GO:0004347 ... P83780 41532565
    976348 9g4a:A (1.653) BS01 peptide N/A GO:0005634 ... Q9BYW2 N/A
    976349 9g4a:A (1.653) BS02 ZN N/A GO:0005634 ... Q9BYW2 N/A
    976350 9g4a:A (1.653) BS03 ZN N/A GO:0005634 ... Q9BYW2 N/A
    976351 9g4a:A (1.653) BS04 ZN N/A GO:0005634 ... Q9BYW2 N/A
    976352 9g4a:A (1.653) BS05 SAM N/A GO:0005634 ... Q9BYW2 N/A
    976353 9g4b:A (1.14) BS01 GDP N/A GO:0003924 ... P01116 40162713
    976354 9g4b:A (1.14) BS02 A1IIU N/A GO:0003924 ... P01116 40162713
    976355 9g4c:B (2.5) BS01 A1IIL N/A N/A A0A7Z7MWD0 N/A
    976356 9g4c:B (2.5) BS02 MG N/A N/A A0A7Z7MWD0 N/A
    976357 9g4c:D (2.5) BS01 A1IIL N/A N/A A0A7Z7MWD0 N/A
    976358 9g4c:D (2.5) BS02 MG N/A N/A A0A7Z7MWD0 N/A
    976359 9g4h:A (1.53) BS01 PA5 N/A GO:0004347 ... P83780 41532565
    976360 9g4h:A (1.53) BS02 A1IHU N/A GO:0004347 ... P83780 41532565
    976361 9g4h:B (1.53) BS01 PA5 N/A GO:0004347 ... P83780 41532565
    976362 9g4h:B (1.53) BS02 A1IHU N/A GO:0004347 ... P83780 41532565
    976363 9g4k:A (1.49) BS01 A1IIB N/A GO:0004347 ... P83780 41532565
    976364 9g4k:A (1.49) BS02 PA5 N/A GO:0004347 ... P83780 41532565
    976365 9g4k:A (1.49) BS03 A1IIB N/A GO:0004347 ... P83780 41532565
    976366 9g4k:B (1.49) BS01 A1IIB N/A GO:0004347 ... P83780 41532565
    976367 9g4k:B (1.49) BS02 A1IIB N/A GO:0004347 ... P83780 41532565
    976368 9g4m:A (1.41) BS01 A1IIH N/A GO:0004622 ... Q99685 39916545
    976369 9g4n:A (2.32) BS01 BGC N/A N/A A0A1Y1CQ89 39528173
    976370 9g4n:A (2.32) BS02 BGC N/A N/A A0A1Y1CQ89 39528173
    976371 9g4n:A (2.32) BS03 BGC N/A N/A A0A1Y1CQ89 39528173
    976372 9g4n:A (2.32) BS04 BGC N/A N/A A0A1Y1CQ89 39528173
    976373 9g4n:B (2.32) BS01 BGC N/A N/A A0A1Y1CQ89 39528173
    976374 9g4n:B (2.32) BS02 BGC N/A N/A A0A1Y1CQ89 39528173
    976375 9g4n:B (2.32) BS03 BGC N/A N/A A0A1Y1CQ89 39528173
    976376 9g4n:B (2.32) BS04 BGC N/A N/A A0A1Y1CQ89 39528173
    976377 9g4n:C (2.32) BS01 BGC N/A N/A A0A1Y1CQ89 39528173
    976378 9g4n:C (2.32) BS02 BGC N/A N/A A0A1Y1CQ89 39528173
    976379 9g4n:C (2.32) BS03 BGC N/A N/A A0A1Y1CQ89 39528173
    976380 9g4n:D (2.32) BS01 BGC N/A N/A A0A1Y1CQ89 39528173
    976381 9g4n:D (2.32) BS02 BGC N/A N/A A0A1Y1CQ89 39528173
    976382 9g4n:D (2.32) BS03 BGC N/A N/A A0A1Y1CQ89 39528173
    976383 9g4n:D (2.32) BS04 BGC N/A N/A A0A1Y1CQ89 39528173
    976384 9g4o:A (1.55) BS01 NAD N/A GO:0005829 ... Q9A0G6 41532565
    976385 9g4o:A (1.55) BS02 A1IH7 N/A GO:0005829 ... Q9A0G6 41532565
    976386 9g4s:A (1.95) BS01 A1III N/A N/A Q86U44 39883878
    976387 9g4s:A (1.95) BS02 CA N/A N/A Q86U44 39883878
    976388 9g4s:A (1.95) BS03 CA N/A N/A Q86U44 39883878
    976389 9g4s:B (1.95) BS01 CA N/A N/A Q9HCE5 39883878
    976390 9g4t:A (2.51) BS01 ZN N/A GO:0004089 ... O85042
    P06654
    41223214
    976391 9g4u:A (2.0) BS01 A1IIK N/A N/A Q86U44 39883878
    976392 9g4w:A (1.85) BS01 A1IIM N/A N/A Q86U44 39883878
    976393 9g4w:B (1.85) BS01 CA N/A N/A Q9HCE5 39883878
    976394 9g4y:A (2.6) BS01 A1IIE N/A GO:0005216 ... Q9UL62 N/A
    976395 9g4y:B (2.6) BS01 A1IIE N/A GO:0005216 ... Q9UL62 N/A
    976396 9g4y:B (2.6) BS02 A1IIE N/A GO:0005216 ... Q9UL62 N/A
    976397 9g4y:C (2.6) BS01 A1IIE N/A GO:0005216 ... Q9UL62 N/A
    976398 9g4y:C (2.6) BS02 A1IIE N/A GO:0005216 ... Q9UL62 N/A
    976399 9g4y:D (2.6) BS01 A1IIE N/A GO:0005216 ... Q9UL62 N/A
    976400 9g4y:D (2.6) BS02 A1IIE N/A GO:0005216 ... Q9UL62 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).