SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    976401 9g50:A (2.9) BS01 ZN N/A GO:0005216 ... Q9UL62 N/A
    976402 9g50:A (2.9) BS02 A1IIF N/A GO:0005216 ... Q9UL62 N/A
    976403 9g50:B (2.9) BS01 ZN N/A GO:0005216 ... Q9UL62 N/A
    976404 9g50:B (2.9) BS02 A1IIF N/A GO:0005216 ... Q9UL62 N/A
    976405 9g50:C (2.9) BS01 ZN N/A GO:0005216 ... Q9UL62 N/A
    976406 9g50:C (2.9) BS02 A1IIF N/A GO:0005216 ... Q9UL62 N/A
    976407 9g50:C (2.9) BS03 A1IIF N/A GO:0005216 ... Q9UL62 N/A
    976408 9g50:D (2.9) BS01 ZN N/A GO:0005216 ... Q9UL62 N/A
    976409 9g50:D (2.9) BS02 A1IIF N/A GO:0005216 ... Q9UL62 N/A
    976410 9g53:A (1.96) BS01 GN1 N/A GO:0003977 ... A0A229XUD0 41532565
    976411 9g53:A (1.96) BS02 A1IIG N/A GO:0003977 ... A0A229XUD0 41532565
    976412 9g53:B (1.96) BS01 GN1 N/A GO:0003977 ... A0A229XUD0 41532565
    976413 9g53:B (1.96) BS02 A1IIG N/A GO:0003977 ... A0A229XUD0 41532565
    976414 9g53:B (1.96) BS03 MG N/A GO:0003977 ... A0A229XUD0 41532565
    976415 9g53:C (1.96) BS01 71G N/A GO:0003977 ... A0A229XUD0 41532565
    976416 9g53:D (1.96) BS01 71G N/A GO:0003977 ... A0A229XUD0 41532565
    976417 9g53:D (1.96) BS02 71G N/A GO:0003977 ... A0A229XUD0 41532565
    976418 9g55:A (3.04) BS01 A8Z N/A GO:0004888 ... P24046 N/A
    976419 9g55:B (3.04) BS01 A8Z N/A GO:0004888 ... P24046 N/A
    976420 9g55:C (3.04) BS01 A8Z N/A GO:0004888 ... P24046 N/A
    976421 9g55:D (3.04) BS01 A8Z N/A GO:0004888 ... P24046 N/A
    976422 9g55:E (3.04) BS01 A8Z N/A GO:0004888 ... P24046 N/A
    976423 9g57:A (2.48) BS01 ABU N/A GO:0004888 ... P24046 N/A
    976424 9g57:A (2.48) BS02 A8Z N/A GO:0004888 ... P24046 N/A
    976425 9g57:A (2.48) BS03 ABU N/A GO:0004888 ... P24046 N/A
    976426 9g57:B (2.48) BS01 ABU N/A GO:0004888 ... P24046 N/A
    976427 9g57:B (2.48) BS02 ABU N/A GO:0004888 ... P24046 N/A
    976428 9g57:B (2.48) BS03 A8Z N/A GO:0004888 ... P24046 N/A
    976429 9g57:C (2.48) BS01 ABU N/A GO:0004888 ... P24046 N/A
    976430 9g57:C (2.48) BS02 A8Z N/A GO:0004888 ... P24046 N/A
    976431 9g57:D (2.48) BS01 ABU N/A GO:0004888 ... P24046 N/A
    976432 9g57:D (2.48) BS02 A8Z N/A GO:0004888 ... P24046 N/A
    976433 9g57:E (2.48) BS01 ABU N/A GO:0004888 ... P24046 N/A
    976434 9g57:E (2.48) BS02 A8Z N/A GO:0004888 ... P24046 N/A
    976435 9g5a:B (1.87) BS01 A1IHU N/A GO:0003977 ... A0A229XUD0 41532565
    976436 9g5a:B (1.87) BS02 GN1 N/A GO:0003977 ... A0A229XUD0 41532565
    976437 9g5a:B (1.87) BS03 A1IHU N/A GO:0003977 ... A0A229XUD0 41532565
    976438 9g5b:0 (3.2) BS01 rna N/A GO:0003735 ... P82930 40240327
    976439 9g5b:9 (3.2) BS01 rna N/A GO:0003723 ... Q8NC60 40240327
    976440 9g5b:B (3.2) BS01 rna N/A GO:0003735 ... Q9Y399 40240327
    976441 9g5b:B (3.2) BS02 MG N/A GO:0003735 ... Q9Y399 40240327
    976442 9g5b:C (3.2) BS01 rna N/A GO:0003723 ... Q96EL2 40240327
    976443 9g5b:D (3.2) BS01 rna N/A GO:0003723 ... P82675 40240327
    976444 9g5b:E (3.2) BS01 rna N/A GO:0003735 ... P82932 40240327
    976445 9g5b:E (3.2) BS02 FES N/A GO:0003735 ... P82932 40240327
    976446 9g5b:F (3.2) BS01 rna N/A GO:0003723 ... Q9Y2R9 40240327
    976447 9g5b:G (3.2) BS01 rna N/A GO:0003723 ... P82933 40240327
    976448 9g5b:H (3.2) BS01 rna N/A GO:0005739 ... P82664 40240327
    976449 9g5b:I (3.2) BS01 rna N/A GO:0003723 ... P82912 40240327
    976450 9g5b:J (3.2) BS01 rna N/A GO:0003723 ... O15235 40240327
    976451 9g5b:K (3.2) BS01 rna N/A GO:0003723 ... O60783 40240327
    976452 9g5b:L (3.2) BS01 rna N/A GO:0003723 ... P82914 40240327
    976453 9g5b:M (3.2) BS01 rna N/A GO:0003735 ... Q9Y3D3 40240327
    976454 9g5b:N (3.2) BS01 rna N/A GO:0003735 ... Q9Y2R5 40240327
    976455 9g5b:O (3.2) BS01 rna N/A GO:0003735 ... Q9Y676 40240327
    976456 9g5b:O (3.2) BS02 ZN N/A GO:0003735 ... Q9Y676 40240327
    976457 9g5b:P (3.2) BS01 rna N/A GO:0003735 ... Q9Y3D5 40240327
    976458 9g5b:P (3.2) BS02 FES N/A GO:0003735 ... Q9Y3D5 40240327
    976459 9g5b:Q (3.2) BS01 rna N/A GO:0003723 ... P82921 40240327
    976460 9g5b:S (3.2) BS01 rna N/A GO:0003723 ... Q9Y3D9 40240327
    976461 9g5b:T (3.2) BS01 rna N/A GO:0003735 ... P82663 40240327
    976462 9g5b:T (3.2) BS02 FES N/A GO:0003735 ... P82663 40240327
    976463 9g5b:U (3.2) BS01 rna N/A GO:0003723 ... Q9BYN8 40240327
    976464 9g5b:X (3.2) BS01 rna N/A GO:0003723 ... P51398 40240327
    976465 9g5b:X (3.2) BS02 ATP N/A GO:0003723 ... P51398 40240327
    976466 9g5b:X (3.2) BS03 GDP N/A GO:0003723 ... P51398 40240327
    976467 9g5b:X (3.2) BS04 MG N/A GO:0003723 ... P51398 40240327
    976468 9g5b:Z (3.2) BS01 rna N/A GO:0003735 ... Q9Y291 40240327
    976469 9g5b:a (3.2) BS01 rna N/A GO:0005515 ... Q8N0V3 40240327
    976470 9g5b:c (3.2) BS01 rna N/A GO:0000154 ... Q8WVM0 40240327
    976471 9g5c:0 (3.0) BS01 rna N/A GO:0003735 ... P82930 40240327
    976472 9g5c:3 (3.0) BS01 rna N/A GO:0005515 ... Q9NWT8 40240327
    976473 9g5c:B (3.0) BS01 rna N/A GO:0003735 ... Q9Y399 40240327
    976474 9g5c:B (3.0) BS02 MG N/A GO:0003735 ... Q9Y399 40240327
    976475 9g5c:C (3.0) BS01 rna N/A GO:0003723 ... Q96EL2 40240327
    976476 9g5c:D (3.0) BS01 rna N/A GO:0003723 ... P82675 40240327
    976477 9g5c:E (3.0) BS01 rna N/A GO:0003735 ... P82932 40240327
    976478 9g5c:E (3.0) BS02 FES N/A GO:0003735 ... P82932 40240327
    976479 9g5c:F (3.0) BS01 rna N/A GO:0003723 ... Q9Y2R9 40240327
    976480 9g5c:G (3.0) BS01 rna N/A GO:0003723 ... P82933 40240327
    976481 9g5c:H (3.0) BS01 rna N/A GO:0005739 ... P82664 40240327
    976482 9g5c:I (3.0) BS01 rna N/A GO:0003723 ... P82912 40240327
    976483 9g5c:J (3.0) BS01 rna N/A GO:0003723 ... O15235 40240327
    976484 9g5c:K (3.0) BS01 rna N/A GO:0003723 ... O60783 40240327
    976485 9g5c:L (3.0) BS01 rna N/A GO:0003723 ... P82914 40240327
    976486 9g5c:M (3.0) BS01 rna N/A GO:0003735 ... Q9Y3D3 40240327
    976487 9g5c:N (3.0) BS01 rna N/A GO:0003735 ... Q9Y2R5 40240327
    976488 9g5c:O (3.0) BS01 rna N/A GO:0003735 ... Q9Y676 40240327
    976489 9g5c:O (3.0) BS02 ZN N/A GO:0003735 ... Q9Y676 40240327
    976490 9g5c:P (3.0) BS01 rna N/A GO:0003735 ... Q9Y3D5 40240327
    976491 9g5c:P (3.0) BS02 FES N/A GO:0003735 ... Q9Y3D5 40240327
    976492 9g5c:Q (3.0) BS01 rna N/A GO:0003723 ... P82921 40240327
    976493 9g5c:S (3.0) BS01 rna N/A GO:0003723 ... Q9Y3D9 40240327
    976494 9g5c:T (3.0) BS01 rna N/A GO:0003735 ... P82663 40240327
    976495 9g5c:T (3.0) BS02 FES N/A GO:0003735 ... P82663 40240327
    976496 9g5c:U (3.0) BS01 rna N/A GO:0003723 ... Q9BYN8 40240327
    976497 9g5c:X (3.0) BS01 rna N/A GO:0003723 ... P51398 40240327
    976498 9g5c:X (3.0) BS02 ATP N/A GO:0003723 ... P51398 40240327
    976499 9g5c:X (3.0) BS03 GDP N/A GO:0003723 ... P51398 40240327
    976500 9g5c:Z (3.0) BS01 rna N/A GO:0003735 ... Q9Y291 40240327
    976501 9g5c:a (3.0) BS01 rna N/A GO:0005515 ... Q8N0V3 40240327
    976502 9g5c:b (3.0) BS01 rna N/A GO:0005515 ... A6NJ78 40240327
    976503 9g5c:b (3.0) BS02 SAH N/A GO:0005515 ... A6NJ78 40240327
    976504 9g5d:0 (3.0) BS01 rna N/A GO:0003735 ... P82930 40240327
    976505 9g5d:1 (3.0) BS01 rna N/A GO:0003723 ... P82673 40240327
    976506 9g5d:3 (3.0) BS01 rna N/A GO:0005515 ... Q9NWT8 40240327
    976507 9g5d:B (3.0) BS01 rna N/A GO:0003735 ... Q9Y399 40240327
    976508 9g5d:B (3.0) BS02 MG N/A GO:0003735 ... Q9Y399 40240327
    976509 9g5d:C (3.0) BS01 rna N/A GO:0003723 ... Q96EL2 40240327
    976510 9g5d:D (3.0) BS01 rna N/A GO:0003723 ... P82675 40240327
    976511 9g5d:E (3.0) BS01 rna N/A GO:0003735 ... P82932 40240327
    976512 9g5d:E (3.0) BS02 FES N/A GO:0003735 ... P82932 40240327
    976513 9g5d:F (3.0) BS01 rna N/A GO:0003723 ... Q9Y2R9 40240327
    976514 9g5d:G (3.0) BS01 rna N/A GO:0003723 ... P82933 40240327
    976515 9g5d:H (3.0) BS01 rna N/A GO:0005739 ... P82664 40240327
    976516 9g5d:I (3.0) BS01 rna N/A GO:0003723 ... P82912 40240327
    976517 9g5d:J (3.0) BS01 rna N/A GO:0003723 ... O15235 40240327
    976518 9g5d:K (3.0) BS01 rna N/A GO:0003723 ... O60783 40240327
    976519 9g5d:L (3.0) BS01 rna N/A GO:0003723 ... P82914 40240327
    976520 9g5d:L (3.0) BS02 NAD N/A GO:0003723 ... P82914 40240327
    976521 9g5d:M (3.0) BS01 rna N/A GO:0003735 ... Q9Y3D3 40240327
    976522 9g5d:N (3.0) BS01 rna N/A GO:0003735 ... Q9Y2R5 40240327
    976523 9g5d:O (3.0) BS01 rna N/A GO:0003735 ... Q9Y676 40240327
    976524 9g5d:O (3.0) BS02 ZN N/A GO:0003735 ... Q9Y676 40240327
    976525 9g5d:P (3.0) BS01 rna N/A GO:0003735 ... Q9Y3D5 40240327
    976526 9g5d:P (3.0) BS02 FES N/A GO:0003735 ... Q9Y3D5 40240327
    976527 9g5d:Q (3.0) BS01 rna N/A GO:0003723 ... P82921 40240327
    976528 9g5d:S (3.0) BS01 rna N/A GO:0003723 ... Q9Y3D9 40240327
    976529 9g5d:T (3.0) BS01 rna N/A GO:0003735 ... P82663 40240327
    976530 9g5d:T (3.0) BS02 FES N/A GO:0003735 ... P82663 40240327
    976531 9g5d:U (3.0) BS01 rna N/A GO:0003723 ... Q9BYN8 40240327
    976532 9g5d:X (3.0) BS01 rna N/A GO:0003723 ... P51398 40240327
    976533 9g5d:X (3.0) BS02 GDP N/A GO:0003723 ... P51398 40240327
    976534 9g5d:X (3.0) BS03 ATP N/A GO:0003723 ... P51398 40240327
    976535 9g5d:Z (3.0) BS01 rna N/A GO:0003735 ... Q9Y291 40240327
    976536 9g5d:a (3.0) BS01 rna N/A GO:0005515 ... Q8N0V3 40240327
    976537 9g5d:b (3.0) BS01 rna N/A GO:0005515 ... A6NJ78 40240327
    976538 9g5d:b (3.0) BS02 SAH N/A GO:0005515 ... A6NJ78 40240327
    976539 9g5e:0 (3.2) BS01 rna N/A GO:0003735 ... P82930 40240327
    976540 9g5e:2 (3.2) BS01 rna N/A GO:0001650 ... Q96BP2 40240327
    976541 9g5e:3 (3.2) BS01 rna N/A GO:0005515 ... Q9NWT8 40240327
    976542 9g5e:7 (3.2) BS01 rna N/A GO:0001731 ... P46199 40240327
    976543 9g5e:7 (3.2) BS02 GTP N/A GO:0001731 ... P46199 40240327
    976544 9g5e:B (3.2) BS01 rna N/A GO:0003735 ... Q9Y399 40240327
    976545 9g5e:B (3.2) BS02 MG N/A GO:0003735 ... Q9Y399 40240327
    976546 9g5e:C (3.2) BS01 rna N/A GO:0003723 ... Q96EL2 40240327
    976547 9g5e:D (3.2) BS01 rna N/A GO:0003723 ... P82675 40240327
    976548 9g5e:E (3.2) BS01 rna N/A GO:0003735 ... P82932 40240327
    976549 9g5e:E (3.2) BS02 FES N/A GO:0003735 ... P82932 40240327
    976550 9g5e:F (3.2) BS01 rna N/A GO:0003723 ... Q9Y2R9 40240327
    976551 9g5e:G (3.2) BS01 rna N/A GO:0003723 ... P82933 40240327
    976552 9g5e:H (3.2) BS01 rna N/A GO:0005739 ... P82664 40240327
    976553 9g5e:I (3.2) BS01 rna N/A GO:0003723 ... P82912 40240327
    976554 9g5e:J (3.2) BS01 rna N/A GO:0003723 ... O15235 40240327
    976555 9g5e:K (3.2) BS01 rna N/A GO:0003723 ... O60783 40240327
    976556 9g5e:L (3.2) BS01 rna N/A GO:0003723 ... P82914 40240327
    976557 9g5e:M (3.2) BS01 rna N/A GO:0003735 ... Q9Y3D3 40240327
    976558 9g5e:N (3.2) BS01 rna N/A GO:0003735 ... Q9Y2R5 40240327
    976559 9g5e:O (3.2) BS01 rna N/A GO:0003735 ... Q9Y676 40240327
    976560 9g5e:O (3.2) BS02 ZN N/A GO:0003735 ... Q9Y676 40240327
    976561 9g5e:P (3.2) BS01 rna N/A GO:0003735 ... Q9Y3D5 40240327
    976562 9g5e:P (3.2) BS02 FES N/A GO:0003735 ... Q9Y3D5 40240327
    976563 9g5e:Q (3.2) BS01 rna N/A GO:0003723 ... P82921 40240327
    976564 9g5e:S (3.2) BS01 rna N/A GO:0003723 ... Q9Y3D9 40240327
    976565 9g5e:T (3.2) BS01 rna N/A GO:0003735 ... P82663 40240327
    976566 9g5e:T (3.2) BS02 FES N/A GO:0003735 ... P82663 40240327
    976567 9g5e:U (3.2) BS01 rna N/A GO:0003723 ... Q9BYN8 40240327
    976568 9g5e:X (3.2) BS01 rna N/A GO:0003723 ... P51398 40240327
    976569 9g5e:X (3.2) BS02 ATP N/A GO:0003723 ... P51398 40240327
    976570 9g5e:X (3.2) BS03 GDP N/A GO:0003723 ... P51398 40240327
    976571 9g5e:Z (3.2) BS01 rna N/A GO:0003735 ... Q9Y291 40240327
    976572 9g5f:A (1.62) BS01 GN1 N/A GO:0003977 ... Q4WAR0 41532565
    976573 9g5f:A (1.62) BS02 YRL N/A GO:0003977 ... Q4WAR0 41532565
    976574 9g5f:A (1.62) BS03 YRL N/A GO:0003977 ... Q4WAR0 41532565
    976575 9g5f:B (1.62) BS01 GN1 N/A GO:0003977 ... Q4WAR0 41532565
    976576 9g5f:B (1.62) BS02 YRL N/A GO:0003977 ... Q4WAR0 41532565
    976577 9g5f:B (1.62) BS03 YRL N/A GO:0003977 ... Q4WAR0 41532565
    976578 9g5f:B (1.62) BS04 MG N/A GO:0003977 ... Q4WAR0 41532565
    976579 9g5f:D (1.62) BS01 YRL N/A GO:0003977 ... Q4WAR0 41532565
    976580 9g5f:D (1.62) BS02 MG N/A GO:0003977 ... Q4WAR0 41532565
    976581 9g5g:A (2.71) BS01 BGC N/A N/A A0A1Y1CQ89 39528173
    976582 9g5g:A (2.71) BS02 BGC N/A N/A A0A1Y1CQ89 39528173
    976583 9g5g:B (2.71) BS01 BGC N/A N/A A0A1Y1CQ89 39528173
    976584 9g5g:D (2.71) BS01 BGC N/A N/A A0A1Y1CQ89 39528173
    976585 9g5g:D (2.71) BS02 BGC N/A N/A A0A1Y1CQ89 39528173
    976586 9g5g:D (2.71) BS03 BGC N/A N/A A0A1Y1CQ89 39528173
    976587 9g5h:A (1.65) BS01 A1IIO N/A GO:0000976 ... P04637 40599607
    976588 9g5h:A (1.65) BS02 A1IIO N/A GO:0000976 ... P04637 40599607
    976589 9g5h:A (1.65) BS03 ZN N/A GO:0000976 ... P04637 40599607
    976590 9g5h:B (1.65) BS01 A1IIO N/A GO:0000976 ... P04637 40599607
    976591 9g5h:B (1.65) BS02 A1IIO N/A GO:0000976 ... P04637 40599607
    976592 9g5h:B (1.65) BS03 A1IIO N/A GO:0000976 ... P04637 40599607
    976593 9g5h:B (1.65) BS04 ZN N/A GO:0000976 ... P04637 40599607
    976594 9g5j:A (2.0) BS01 peptide N/A GO:0008237 ... A4INY2 41583563
    976595 9g5j:A (2.0) BS02 ZN N/A GO:0008237 ... A4INY2 41583563
    976596 9g5j:B (2.0) BS01 peptide N/A GO:0008237 ... A4INY2 41583563
    976597 9g5j:B (2.0) BS02 peptide N/A GO:0008237 ... A4INY2 41583563
    976598 9g5j:B (2.0) BS03 ZN N/A GO:0008237 ... A4INY2 41583563
    976599 9g5j:C (2.0) BS01 peptide N/A GO:0008237 ... A4INY2 41583563
    976600 9g5j:C (2.0) BS02 peptide N/A GO:0008237 ... A4INY2 41583563

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).