SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    977201 9g6j:n (2.15) BS01 rna N/A GO:0002181 ... A0A1D8PCX8 40273100
    977202 9g6j:o (2.15) BS01 rna N/A GO:0000463 ... A0A1D8PDL6 40273100
    977203 9g6j:o (2.15) BS02 rna N/A GO:0000463 ... A0A1D8PDL6 40273100
    977204 9g6j:p (2.15) BS01 rna N/A GO:0000470 ... Q5ANA1 40273100
    977205 9g6j:p (2.15) BS02 rna N/A GO:0000470 ... Q5ANA1 40273100
    977206 9g6j:q (2.15) BS01 rna N/A GO:0002181 ... Q5AEN2 40273100
    977207 9g6j:r (2.15) BS01 rna N/A GO:0003735 ... Q5AIB8 40273100
    977208 9g6j:r (2.15) BS02 rna N/A GO:0003735 ... Q5AIB8 40273100
    977209 9g6j:s (2.15) BS01 rna N/A GO:0003723 ... A0A1D8PHW1 40273100
    977210 9g6j:s (2.15) BS02 rna N/A GO:0003723 ... A0A1D8PHW1 40273100
    977211 9g6j:t (2.15) BS01 rna N/A GO:0003723 ... O59931 40273100
    977212 9g6j:t (2.15) BS02 rna N/A GO:0003723 ... O59931 40273100
    977213 9g6j:u (2.15) BS01 rna N/A GO:0003723 ... A0A1D8PFL9 40273100
    977214 9g6j:v (2.15) BS01 rna N/A GO:0002181 ... Q5A6R1 40273100
    977215 9g6j:v (2.15) BS02 rna N/A GO:0002181 ... Q5A6R1 40273100
    977216 9g6j:w (2.15) BS01 rna N/A GO:0003729 ... Q5AB87 40273100
    977217 9g6j:x (2.15) BS01 rna N/A GO:0002181 ... Q59TE0 40273100
    977218 9g6j:x (2.15) BS02 rna N/A GO:0002181 ... Q59TE0 40273100
    977219 9g6j:y (2.15) BS01 rna N/A GO:0002181 ... A0A1D8PK43 40273100
    977220 9g6j:z (2.15) BS01 rna N/A GO:0003723 ... A0A1D8PK40 40273100
    977221 9g6j:z (2.15) BS02 rna N/A GO:0003723 ... A0A1D8PK40 40273100
    977222 9g6k:L0 (2.89) BS01 rna N/A GO:0003676 ... S8F7E5 39690155
    977223 9g6k:L0 (2.89) BS02 rna N/A GO:0003676 ... S8F7E5 39690155
    977224 9g6k:L1 (2.89) BS01 rna N/A N/A S8F6A8 39690155
    977225 9g6k:L1 (2.89) BS02 rna N/A N/A S8F6A8 39690155
    977226 9g6k:L2 (2.89) BS01 rna N/A N/A A0A0F7V439 39690155
    977227 9g6k:L2 (2.89) BS02 rna N/A N/A A0A0F7V439 39690155
    977228 9g6k:L2 (2.89) BS03 rna N/A N/A A0A0F7V439 39690155
    977229 9g6k:L2 (2.89) BS04 rna N/A N/A A0A0F7V439 39690155
    977230 9g6k:L3 (2.89) BS01 rna N/A GO:0003735 ... S8ER88 39690155
    977231 9g6k:L4 (2.89) BS01 rna N/A N/A S8G8G0 39690155
    977232 9g6k:L4 (2.89) BS02 rna N/A N/A S8G8G0 39690155
    977233 9g6k:L4 (2.89) BS03 rna N/A N/A S8G8G0 39690155
    977234 9g6k:L4 (2.89) BS04 rna N/A N/A S8G8G0 39690155
    977235 9g6k:L5 (2.89) BS01 rna N/A N/A S8F1F9 39690155
    977236 9g6k:L5 (2.89) BS02 rna N/A N/A S8F1F9 39690155
    977237 9g6k:L6 (2.89) BS01 rna N/A N/A A0A2T6IV06 39690155
    977238 9g6k:L7 (2.89) BS01 rna N/A GO:0003735 ... A0A125YQP1 39690155
    977239 9g6k:L7 (2.89) BS02 rna N/A GO:0003735 ... A0A125YQP1 39690155
    977240 9g6k:L7 (2.89) BS03 rna N/A GO:0003735 ... A0A125YQP1 39690155
    977241 9g6k:L7 (2.89) BS04 rna N/A GO:0003735 ... A0A125YQP1 39690155
    977242 9g6k:L8 (2.89) BS01 rna N/A GO:0003735 ... A0A125YFY0 39690155
    977243 9g6k:L8 (2.89) BS02 rna N/A GO:0003735 ... A0A125YFY0 39690155
    977244 9g6k:L8 (2.89) BS03 rna N/A GO:0003735 ... A0A125YFY0 39690155
    977245 9g6k:L8 (2.89) BS04 rna N/A GO:0003735 ... A0A125YFY0 39690155
    977246 9g6k:L8 (2.89) BS05 rna N/A GO:0003735 ... A0A125YFY0 39690155
    977247 9g6k:L8 (2.89) BS06 rna N/A GO:0003735 ... A0A125YFY0 39690155
    977248 9g6k:L8 (2.89) BS07 rna N/A GO:0003735 ... A0A125YFY0 39690155
    977249 9g6k:L9 (2.89) BS01 rna N/A N/A A0A125YNS5 39690155
    977250 9g6k:L9 (2.89) BS02 rna N/A N/A A0A125YNS5 39690155
    977251 9g6k:L9 (2.89) BS03 rna N/A N/A A0A125YNS5 39690155
    977252 9g6k:LA (2.89) BS01 rna N/A GO:0003729 ... A0A125YJY5 39690155
    977253 9g6k:LA (2.89) BS02 rna N/A GO:0003729 ... A0A125YJY5 39690155
    977254 9g6k:LA (2.89) BS03 rna N/A GO:0003729 ... A0A125YJY5 39690155
    977255 9g6k:LA (2.89) BS04 rna N/A GO:0003729 ... A0A125YJY5 39690155
    977256 9g6k:LA (2.89) BS05 rna N/A GO:0003729 ... A0A125YJY5 39690155
    977257 9g6k:LA (2.89) BS06 rna N/A GO:0003729 ... A0A125YJY5 39690155
    977258 9g6k:LB (2.89) BS01 rna N/A GO:0003735 ... A0A125YU12 39690155
    977259 9g6k:LB (2.89) BS02 rna N/A GO:0003735 ... A0A125YU12 39690155
    977260 9g6k:LB (2.89) BS03 rna N/A GO:0003735 ... A0A125YU12 39690155
    977261 9g6k:LB (2.89) BS04 rna N/A GO:0003735 ... A0A125YU12 39690155
    977262 9g6k:LC (2.89) BS01 rna N/A N/A S8GAV7 39690155
    977263 9g6k:LC (2.89) BS02 rna N/A N/A S8GAV7 39690155
    977264 9g6k:LE (2.89) BS01 rna N/A N/A S8F814 39690155
    977265 9g6k:LE (2.89) BS02 rna N/A N/A S8F814 39690155
    977266 9g6k:LE (2.89) BS03 rna N/A N/A S8F814 39690155
    977267 9g6k:LE (2.89) BS04 rna N/A N/A S8F814 39690155
    977268 9g6k:LE (2.89) BS05 rna N/A N/A S8F814 39690155
    977269 9g6k:LF (2.89) BS01 rna N/A N/A S8GJM3 39690155
    977270 9g6k:LF (2.89) BS02 rna N/A N/A S8GJM3 39690155
    977271 9g6k:LF (2.89) BS03 rna N/A N/A S8GJM3 39690155
    977272 9g6k:LF (2.89) BS04 rna N/A N/A S8GJM3 39690155
    977273 9g6k:LG (2.89) BS01 rna N/A N/A A0A7J6JUA9 39690155
    977274 9g6k:LG (2.89) BS02 rna N/A N/A A0A7J6JUA9 39690155
    977275 9g6k:LG (2.89) BS03 rna N/A N/A A0A7J6JUA9 39690155
    977276 9g6k:LH (2.89) BS01 rna N/A GO:0003735 ... S8G4D4 39690155
    977277 9g6k:LI (2.89) BS01 rna N/A GO:0003735 ... A0A125YTD0 39690155
    977278 9g6k:LI (2.89) BS02 rna N/A GO:0003735 ... A0A125YTD0 39690155
    977279 9g6k:LI (2.89) BS03 rna N/A GO:0003735 ... A0A125YTD0 39690155
    977280 9g6k:LI (2.89) BS04 rna N/A GO:0003735 ... A0A125YTD0 39690155
    977281 9g6k:LJ (2.89) BS01 rna N/A N/A A0A125YNK1 39690155
    977282 9g6k:LJ (2.89) BS02 rna N/A N/A A0A125YNK1 39690155
    977283 9g6k:LJ (2.89) BS03 rna N/A N/A A0A125YNK1 39690155
    977284 9g6k:LJ (2.89) BS04 rna N/A N/A A0A125YNK1 39690155
    977285 9g6k:LJ (2.89) BS05 rna N/A N/A A0A125YNK1 39690155
    977286 9g6k:LJ (2.89) BS06 rna N/A N/A A0A125YNK1 39690155
    977287 9g6k:LK (2.89) BS01 rna N/A N/A S8GF62 39690155
    977288 9g6k:LK (2.89) BS02 rna N/A N/A S8GF62 39690155
    977289 9g6k:LK (2.89) BS03 rna N/A N/A S8GF62 39690155
    977290 9g6k:LK (2.89) BS04 rna N/A N/A S8GF62 39690155
    977291 9g6k:LK (2.89) BS05 rna N/A N/A S8GF62 39690155
    977292 9g6k:LL (2.89) BS01 rna N/A N/A S8F8W6 39690155
    977293 9g6k:LL (2.89) BS02 rna N/A N/A S8F8W6 39690155
    977294 9g6k:LL (2.89) BS03 rna N/A N/A S8F8W6 39690155
    977295 9g6k:LL (2.89) BS04 rna N/A N/A S8F8W6 39690155
    977296 9g6k:LL (2.89) BS05 rna N/A N/A S8F8W6 39690155
    977297 9g6k:LM (2.89) BS01 rna N/A GO:0003735 ... A0A125YTN1 39690155
    977298 9g6k:LM (2.89) BS02 rna N/A GO:0003735 ... A0A125YTN1 39690155
    977299 9g6k:LN (2.89) BS01 rna N/A N/A A0A125YU18 39690155
    977300 9g6k:LN (2.89) BS02 rna N/A N/A A0A125YU18 39690155
    977301 9g6k:LN (2.89) BS03 rna N/A N/A A0A125YU18 39690155
    977302 9g6k:LN (2.89) BS04 rna N/A N/A A0A125YU18 39690155
    977303 9g6k:LN (2.89) BS05 rna N/A N/A A0A125YU18 39690155
    977304 9g6k:LN (2.89) BS06 rna N/A N/A A0A125YU18 39690155
    977305 9g6k:LN (2.89) BS07 rna N/A N/A A0A125YU18 39690155
    977306 9g6k:LO (2.89) BS01 rna N/A GO:0003723 ... S8F793 39690155
    977307 9g6k:LO (2.89) BS02 rna N/A GO:0003723 ... S8F793 39690155
    977308 9g6k:LO (2.89) BS03 rna N/A GO:0003723 ... S8F793 39690155
    977309 9g6k:LP (2.89) BS01 rna N/A GO:0000413 ... S8FB56 39690155
    977310 9g6k:LP (2.89) BS02 rna N/A GO:0000413 ... S8FB56 39690155
    977311 9g6k:LQ (2.89) BS01 rna N/A N/A A0A125YKA8 39690155
    977312 9g6k:LQ (2.89) BS02 rna N/A N/A A0A125YKA8 39690155
    977313 9g6k:LR (2.89) BS01 rna N/A N/A A0A125YZ59 39690155
    977314 9g6k:LR (2.89) BS02 rna N/A N/A A0A125YZ59 39690155
    977315 9g6k:LS (2.89) BS01 rna N/A GO:0003723 ... A0A125YMH9 39690155
    977316 9g6k:LS (2.89) BS02 rna N/A GO:0003723 ... A0A125YMH9 39690155
    977317 9g6k:LS (2.89) BS03 rna N/A GO:0003723 ... A0A125YMH9 39690155
    977318 9g6k:LS (2.89) BS04 rna N/A GO:0003723 ... A0A125YMH9 39690155
    977319 9g6k:LT (2.89) BS01 rna N/A GO:0003735 ... A0A125YRM7 39690155
    977320 9g6k:LT (2.89) BS02 rna N/A GO:0003735 ... A0A125YRM7 39690155
    977321 9g6k:LT (2.89) BS03 rna N/A GO:0003735 ... A0A125YRM7 39690155
    977322 9g6k:LT (2.89) BS04 rna N/A GO:0003735 ... A0A125YRM7 39690155
    977323 9g6k:LT (2.89) BS05 rna N/A GO:0003735 ... A0A125YRM7 39690155
    977324 9g6k:LT (2.89) BS06 rna N/A GO:0003735 ... A0A125YRM7 39690155
    977325 9g6k:LU (2.89) BS01 rna N/A GO:0003735 ... A0A125YX92 39690155
    977326 9g6k:LU (2.89) BS02 rna N/A GO:0003735 ... A0A125YX92 39690155
    977327 9g6k:LV (2.89) BS01 rna N/A N/A S8EU00 39690155
    977328 9g6k:LV (2.89) BS02 rna N/A N/A S8EU00 39690155
    977329 9g6k:LW (2.89) BS01 rna N/A GO:0003735 ... A0A125YKW9 39690155
    977330 9g6k:LW (2.89) BS02 rna N/A GO:0003735 ... A0A125YKW9 39690155
    977331 9g6k:LW (2.89) BS03 rna N/A GO:0003735 ... A0A125YKW9 39690155
    977332 9g6k:LW (2.89) BS04 rna N/A GO:0003735 ... A0A125YKW9 39690155
    977333 9g6k:LW (2.89) BS05 rna N/A GO:0003735 ... A0A125YKW9 39690155
    977334 9g6k:LW (2.89) BS06 rna N/A GO:0003735 ... A0A125YKW9 39690155
    977335 9g6k:LY (2.89) BS01 rna N/A GO:0003735 ... S8F1I2 39690155
    977336 9g6k:LY (2.89) BS02 rna N/A GO:0003735 ... S8F1I2 39690155
    977337 9g6k:LY (2.89) BS03 rna N/A GO:0003735 ... S8F1I2 39690155
    977338 9g6k:LY (2.89) BS04 rna N/A GO:0003735 ... S8F1I2 39690155
    977339 9g6k:LY (2.89) BS05 rna N/A GO:0003735 ... S8F1I2 39690155
    977340 9g6k:LY (2.89) BS06 rna N/A GO:0003735 ... S8F1I2 39690155
    977341 9g6k:LY (2.89) BS07 rna N/A GO:0003735 ... S8F1I2 39690155
    977342 9g6k:LY (2.89) BS08 rna N/A GO:0003735 ... S8F1I2 39690155
    977343 9g6k:LY (2.89) BS09 rna N/A GO:0003735 ... S8F1I2 39690155
    977344 9g6k:LZ (2.89) BS01 rna N/A N/A A0A125YYR6 39690155
    977345 9g6k:LZ (2.89) BS02 rna N/A N/A A0A125YYR6 39690155
    977346 9g6k:LZ (2.89) BS03 rna N/A N/A A0A125YYR6 39690155
    977347 9g6k:LZ (2.89) BS04 rna N/A N/A A0A125YYR6 39690155
    977348 9g6k:La (2.89) BS01 rna N/A GO:0003735 ... A0A125YSK9 39690155
    977349 9g6k:La (2.89) BS02 rna N/A GO:0003735 ... A0A125YSK9 39690155
    977350 9g6k:La (2.89) BS03 rna N/A GO:0003735 ... A0A125YSK9 39690155
    977351 9g6k:La (2.89) BS04 rna N/A GO:0003735 ... A0A125YSK9 39690155
    977352 9g6k:Lb (2.89) BS01 rna N/A N/A S8F6E9 39690155
    977353 9g6k:Lb (2.89) BS02 rna N/A N/A S8F6E9 39690155
    977354 9g6k:Lb (2.89) BS03 rna N/A N/A S8F6E9 39690155
    977355 9g6k:Lb (2.89) BS04 rna N/A N/A S8F6E9 39690155
    977356 9g6k:Lb (2.89) BS05 rna N/A N/A S8F6E9 39690155
    977357 9g6k:Lb (2.89) BS06 rna N/A N/A S8F6E9 39690155
    977358 9g6k:Le (2.89) BS01 rna N/A N/A S8GIP4 39690155
    977359 9g6k:Le (2.89) BS02 rna N/A N/A S8GIP4 39690155
    977360 9g6k:Le (2.89) BS03 rna N/A N/A S8GIP4 39690155
    977361 9g6k:Le (2.89) BS04 rna N/A N/A S8GIP4 39690155
    977362 9g6k:Le (2.89) BS05 rna N/A N/A S8GIP4 39690155
    977363 9g6k:Lf (2.89) BS01 rna N/A N/A S8GMU2 39690155
    977364 9g6k:Lf (2.89) BS02 rna N/A N/A S8GMU2 39690155
    977365 9g6k:Lf (2.89) BS03 rna N/A N/A S8GMU2 39690155
    977366 9g6k:Lg (2.89) BS01 rna N/A GO:0003735 ... A0A125YVS8 39690155
    977367 9g6k:Lg (2.89) BS02 rna N/A GO:0003735 ... A0A125YVS8 39690155
    977368 9g6k:Lg (2.89) BS03 rna N/A GO:0003735 ... A0A125YVS8 39690155
    977369 9g6k:Lh (2.89) BS01 rna N/A GO:0003735 ... S8EX11 39690155
    977370 9g6k:Lh (2.89) BS02 rna N/A GO:0003735 ... S8EX11 39690155
    977371 9g6k:Lh (2.89) BS03 rna N/A GO:0003735 ... S8EX11 39690155
    977372 9g6k:Lh (2.89) BS04 rna N/A GO:0003735 ... S8EX11 39690155
    977373 9g6k:Lh (2.89) BS05 rna N/A GO:0003735 ... S8EX11 39690155
    977374 9g6k:Lh (2.89) BS06 rna N/A GO:0003735 ... S8EX11 39690155
    977375 9g6k:Lh (2.89) BS07 rna N/A GO:0003735 ... S8EX11 39690155
    977376 9g6k:Lh (2.89) BS08 rna N/A GO:0003735 ... S8EX11 39690155
    977377 9g6k:Lh (2.89) BS09 rna N/A GO:0003735 ... S8EX11 39690155
    977378 9g6k:Lh (2.89) BS10 rna N/A GO:0003735 ... S8EX11 39690155
    977379 9g6k:Li (2.89) BS01 rna N/A N/A S8FC14 39690155
    977380 9g6k:Li (2.89) BS02 rna N/A N/A S8FC14 39690155
    977381 9g6k:Li (2.89) BS03 rna N/A N/A S8FC14 39690155
    977382 9g6k:Lj (2.89) BS01 rna N/A N/A A0A125YYH1 39690155
    977383 9g6k:Lj (2.89) BS02 rna N/A N/A A0A125YYH1 39690155
    977384 9g6k:Lj (2.89) BS03 rna N/A N/A A0A125YYH1 39690155
    977385 9g6k:Lj (2.89) BS04 rna N/A N/A A0A125YYH1 39690155
    977386 9g6k:Lj (2.89) BS05 rna N/A N/A A0A125YYH1 39690155
    977387 9g6k:Lk (2.89) BS01 rna N/A N/A S8F1K6 39690155
    977388 9g6k:Lk (2.89) BS02 rna N/A N/A S8F1K6 39690155
    977389 9g6k:Ll (2.89) BS01 rna N/A GO:0003735 ... A0A125YVS1 39690155
    977390 9g6k:Ll (2.89) BS02 rna N/A GO:0003735 ... A0A125YVS1 39690155
    977391 9g6k:Ll (2.89) BS03 rna N/A GO:0003735 ... A0A125YVS1 39690155
    977392 9g6k:Ll (2.89) BS04 rna N/A GO:0003735 ... A0A125YVS1 39690155
    977393 9g6k:Lm (2.89) BS01 rna N/A GO:0003723 ... A0A125YTV4 39690155
    977394 9g6k:Lm (2.89) BS02 rna N/A GO:0003723 ... A0A125YTV4 39690155
    977395 9g6k:Lm (2.89) BS03 rna N/A GO:0003723 ... A0A125YTV4 39690155
    977396 9g6k:Ln (2.89) BS01 rna N/A N/A S8G210 39690155
    977397 9g6k:Ln (2.89) BS02 rna N/A N/A S8G210 39690155
    977398 9g6k:Ln (2.89) BS03 rna N/A N/A S8G210 39690155
    977399 9g6k:Lo (2.89) BS01 rna N/A N/A S8G7J3 39690155
    977400 9g6k:Lo (2.89) BS02 rna N/A N/A S8G7J3 39690155
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
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