SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    977401 9g6k:Lo (2.89) BS03 rna N/A N/A S8G7J3 39690155
    977402 9g6k:Lp (2.89) BS01 rna N/A GO:0003735 ... S8GBY9 39690155
    977403 9g6k:Lp (2.89) BS02 rna N/A GO:0003735 ... S8GBY9 39690155
    977404 9g6k:Lp (2.89) BS03 rna N/A GO:0003735 ... S8GBY9 39690155
    977405 9g6k:Lp (2.89) BS04 rna N/A GO:0003735 ... S8GBY9 39690155
    977406 9g6k:Lp (2.89) BS05 rna N/A GO:0003735 ... S8GBY9 39690155
    977407 9g6k:Lp (2.89) BS06 rna N/A GO:0003735 ... S8GBY9 39690155
    977408 9g6k:Lp (2.89) BS07 rna N/A GO:0003735 ... S8GBY9 39690155
    977409 9g6k:Lp (2.89) BS08 rna N/A GO:0003735 ... S8GBY9 39690155
    977410 9g6k:Lq (2.89) BS01 rna N/A N/A S8EQ41 39690155
    977411 9g6k:Lq (2.89) BS02 rna N/A N/A S8EQ41 39690155
    977412 9g6k:Lq (2.89) BS03 rna N/A N/A S8EQ41 39690155
    977413 9g6k:Lq (2.89) BS04 rna N/A N/A S8EQ41 39690155
    977414 9g6k:Lr (2.89) BS01 rna N/A GO:0003735 ... A0A125YXA5 39690155
    977415 9g6k:Lr (2.89) BS02 rna N/A GO:0003735 ... A0A125YXA5 39690155
    977416 9g6k:Lr (2.89) BS03 rna N/A GO:0003735 ... A0A125YXA5 39690155
    977417 9g6k:Lr (2.89) BS04 rna N/A GO:0003735 ... A0A125YXA5 39690155
    977418 9g6k:Lr (2.89) BS05 rna N/A GO:0003735 ... A0A125YXA5 39690155
    977419 9g6k:Ls (2.89) BS01 rna N/A GO:0003735 ... S8GIU7 39690155
    977420 9g6k:Ls (2.89) BS02 rna N/A GO:0003735 ... S8GIU7 39690155
    977421 9g6k:Ls (2.89) BS03 rna N/A GO:0003735 ... S8GIU7 39690155
    977422 9g6k:Ls (2.89) BS04 rna N/A GO:0003735 ... S8GIU7 39690155
    977423 9g6k:Ls (2.89) BS05 rna N/A GO:0003735 ... S8GIU7 39690155
    977424 9g6k:Ls (2.89) BS06 rna N/A GO:0003735 ... S8GIU7 39690155
    977425 9g6k:Ls (2.89) BS07 rna N/A GO:0003735 ... S8GIU7 39690155
    977426 9g6k:Lt (2.89) BS01 rna N/A N/A S8F2D4 39690155
    977427 9g6k:Lu (2.89) BS01 rna N/A N/A A0A125YRP8 39690155
    977428 9g6k:Lv (2.89) BS01 rna N/A N/A A0A125YKH4 39690155
    977429 9g6k:Lw (2.89) BS01 rna N/A GO:0003735 ... A0A125YNI9 39690155
    977430 9g6k:Lw (2.89) BS02 rna N/A GO:0003735 ... A0A125YNI9 39690155
    977431 9g6k:Lw (2.89) BS03 rna N/A GO:0003735 ... A0A125YNI9 39690155
    977432 9g6k:Lx (2.89) BS01 rna N/A N/A S8G7B2 39690155
    977433 9g6k:Ly (2.89) BS01 rna N/A GO:0005840 ... S8F9B8 39690155
    977434 9g6k:Ly (2.89) BS02 rna N/A GO:0005840 ... S8F9B8 39690155
    977435 9g6k:Ly (2.89) BS03 rna N/A GO:0005840 ... S8F9B8 39690155
    977436 9g6k:Ly (2.89) BS04 rna N/A GO:0005840 ... S8F9B8 39690155
    977437 9g6k:Ly (2.89) BS05 rna N/A GO:0005840 ... S8F9B8 39690155
    977438 9g6k:Ly (2.89) BS06 rna N/A GO:0005840 ... S8F9B8 39690155
    977439 9g6k:Ly (2.89) BS07 rna N/A GO:0005840 ... S8F9B8 39690155
    977440 9g6k:Lz (2.89) BS01 rna N/A GO:0003676 ... A0A125YVN6 39690155
    977441 9g6k:Lz (2.89) BS02 rna N/A GO:0003676 ... A0A125YVN6 39690155
    977442 9g6k:Lz (2.89) BS03 rna N/A GO:0003676 ... A0A125YVN6 39690155
    977443 9g6k:UA (2.89) BS01 rna N/A N/A S8FAF6 39690155
    977444 9g6k:UA (2.89) BS02 rna N/A N/A S8FAF6 39690155
    977445 9g6k:UB (2.89) BS01 rna N/A N/A S8GME4 39690155
    977446 9g6k:UB (2.89) BS02 rna N/A N/A S8GME4 39690155
    977447 9g6k:UB (2.89) BS03 rna N/A N/A S8GME4 39690155
    977448 9g6k:UB (2.89) BS04 rna N/A N/A S8GME4 39690155
    977449 9g6k:UC (2.89) BS01 rna N/A N/A S8EXG3 39690155
    977450 9g6k:UC (2.89) BS02 rna N/A N/A S8EXG3 39690155
    977451 9g6k:UD (2.89) BS01 rna N/A N/A A0A125YKV7 39690155
    977452 9g6k:UD (2.89) BS02 rna N/A N/A A0A125YKV7 39690155
    977453 9g6k:UD (2.89) BS03 rna N/A N/A A0A125YKV7 39690155
    977454 9g6k:UD (2.89) BS04 rna N/A N/A A0A125YKV7 39690155
    977455 9g6k:UE (2.89) BS01 rna N/A N/A S8G1Y9 39690155
    977456 9g6k:UF (2.89) BS01 rna N/A N/A A0A125YQ85 39690155
    977457 9g6k:UF (2.89) BS02 rna N/A N/A A0A125YQ85 39690155
    977458 9g6k:UF (2.89) BS03 rna N/A N/A A0A125YQ85 39690155
    977459 9g6k:UF (2.89) BS04 rna N/A N/A A0A125YQ85 39690155
    977460 9g6k:UF (2.89) BS05 rna N/A N/A A0A125YQ85 39690155
    977461 9g6k:UG (2.89) BS01 rna N/A GO:0003700 ... S8GSN6 39690155
    977462 9g6k:UG (2.89) BS02 rna N/A GO:0003700 ... S8GSN6 39690155
    977463 9g6k:UG (2.89) BS03 rna N/A GO:0003700 ... S8GSN6 39690155
    977464 9g6k:UH (2.89) BS01 rna N/A N/A N/A 39690155
    977465 9g6k:UH (2.89) BS02 rna N/A N/A N/A 39690155
    977466 9g6k:UI (2.89) BS01 rna N/A N/A A0A0F7V869 39690155
    977467 9g6k:UI (2.89) BS02 rna N/A N/A A0A0F7V869 39690155
    977468 9g6l:A (1.7) BS01 GLC N/A GO:0000287 ... P24300 40670369
    977469 9g6l:A (1.7) BS02 GLO N/A GO:0000287 ... P24300 40670369
    977470 9g6l:A (1.7) BS03 MG N/A GO:0000287 ... P24300 40670369
    977471 9g6l:A (1.7) BS04 MG N/A GO:0000287 ... P24300 40670369
    977472 9g6l:A (1.7) BS05 MG N/A GO:0000287 ... P24300 40670369
    977473 9g6m:A (1.7) BS01 GLC N/A GO:0000287 ... P24300 40670369
    977474 9g6m:A (1.7) BS02 GLO N/A GO:0000287 ... P24300 40670369
    977475 9g6m:A (1.7) BS03 MG N/A GO:0000287 ... P24300 40670369
    977476 9g6m:A (1.7) BS04 MG N/A GO:0000287 ... P24300 40670369
    977477 9g6m:A (1.7) BS05 MG N/A GO:0000287 ... P24300 40670369
    977478 9g6n:A (1.7) BS01 GLC N/A GO:0000287 ... P24300 40670369
    977479 9g6n:A (1.7) BS02 GLO N/A GO:0000287 ... P24300 40670369
    977480 9g6n:A (1.7) BS03 MG N/A GO:0000287 ... P24300 40670369
    977481 9g6n:A (1.7) BS04 MG N/A GO:0000287 ... P24300 40670369
    977482 9g6n:A (1.7) BS05 MG N/A GO:0000287 ... P24300 40670369
    977483 9g6o:A (1.7) BS01 GLC N/A GO:0000287 ... P24300 40670369
    977484 9g6o:A (1.7) BS02 GLO N/A GO:0000287 ... P24300 40670369
    977485 9g6o:A (1.7) BS03 MG N/A GO:0000287 ... P24300 40670369
    977486 9g6o:A (1.7) BS04 MG N/A GO:0000287 ... P24300 40670369
    977487 9g6o:A (1.7) BS05 MG N/A GO:0000287 ... P24300 40670369
    977488 9g6p:A (1.7) BS01 GLC N/A GO:0000287 ... P24300 40670369
    977489 9g6p:A (1.7) BS02 GLO N/A GO:0000287 ... P24300 40670369
    977490 9g6p:A (1.7) BS03 MG N/A GO:0000287 ... P24300 40670369
    977491 9g6p:A (1.7) BS04 MG N/A GO:0000287 ... P24300 40670369
    977492 9g6p:A (1.7) BS05 MG N/A GO:0000287 ... P24300 40670369
    977493 9g6q:H (1.2) BS01 RBR N/A N/A N/A 39892658
    977494 9g6q:L (1.2) BS01 RBR N/A N/A N/A 39892658
    977495 9g6r:H (1.72) BS01 RBR N/A N/A N/A 39892658
    977496 9g6r:L (1.72) BS01 RBR N/A N/A N/A 39892658
    977497 9g6s:H (2.373) BS01 RBR N/A N/A N/A 39892658
    977498 9g6s:L (2.373) BS01 RBR N/A N/A N/A 39892658
    977499 9g6t:A (1.56) BS01 A1II4 N/A GO:0000976 ... P04637 40599607
    977500 9g6t:A (1.56) BS02 A1II4 N/A GO:0000976 ... P04637 40599607
    977501 9g6t:A (1.56) BS03 ZN N/A GO:0000976 ... P04637 40599607
    977502 9g6t:B (1.56) BS01 A1II4 N/A GO:0000976 ... P04637 40599607
    977503 9g6t:B (1.56) BS02 A1II4 N/A GO:0000976 ... P04637 40599607
    977504 9g6t:B (1.56) BS03 A1II4 N/A GO:0000976 ... P04637 40599607
    977505 9g6t:B (1.56) BS04 ZN N/A GO:0000976 ... P04637 40599607
    977506 9g6u:A (1.64) BS01 A1II1 N/A GO:0000976 ... P04637 40599607
    977507 9g6u:A (1.64) BS02 A1II1 N/A GO:0000976 ... P04637 40599607
    977508 9g6u:A (1.64) BS03 ZN N/A GO:0000976 ... P04637 40599607
    977509 9g6u:B (1.64) BS01 A1II1 N/A GO:0000976 ... P04637 40599607
    977510 9g6u:B (1.64) BS02 A1II1 N/A GO:0000976 ... P04637 40599607
    977511 9g6u:B (1.64) BS03 A1II1 N/A GO:0000976 ... P04637 40599607
    977512 9g6u:B (1.64) BS04 ZN N/A GO:0000976 ... P04637 40599607
    977513 9g6w:A (2.0) BS01 A1IIW N/A N/A Q9H2X3 N/A
    977514 9g6w:A (2.0) BS02 CA N/A N/A Q9H2X3 N/A
    977515 9g6w:A (2.0) BS03 CA N/A N/A Q9H2X3 N/A
    977516 9g6w:A (2.0) BS04 CA N/A N/A Q9H2X3 N/A
    977517 9g6w:B (2.0) BS01 A1IIW N/A N/A Q9H2X3 N/A
    977518 9g6w:B (2.0) BS02 CA N/A N/A Q9H2X3 N/A
    977519 9g6w:B (2.0) BS03 CA N/A N/A Q9H2X3 N/A
    977520 9g6w:B (2.0) BS04 CA N/A N/A Q9H2X3 N/A
    977521 9g6y:A (1.9) BS01 A1IIY N/A GO:0000287 ... Q9UKK9 N/A
    977522 9g6y:A (1.9) BS02 A1IIY N/A GO:0000287 ... Q9UKK9 N/A
    977523 9g6y:B (1.9) BS01 A1IIY N/A GO:0000287 ... Q9UKK9 N/A
    977524 9g6y:B (1.9) BS02 A1IIY N/A GO:0000287 ... Q9UKK9 N/A
    977525 9g6y:B (1.9) BS03 MG N/A GO:0000287 ... Q9UKK9 N/A
    977526 9g6z:A (2.22) BS01 peptide N/A N/A Q09293 37758951
    977527 9g70:A (3.13) BS01 ABU N/A GO:0004888 ... P24046 N/A
    977528 9g70:A (3.13) BS02 ABU N/A GO:0004888 ... P24046 N/A
    977529 9g70:B (3.13) BS01 ABU N/A GO:0004888 ... P24046 N/A
    977530 9g70:C (3.13) BS01 P9N N/A GO:0004888 ... P24046 N/A
    977531 9g70:C (3.13) BS02 ABU N/A GO:0004888 ... P24046 N/A
    977532 9g70:D (3.13) BS01 ABU N/A GO:0004888 ... P24046 N/A
    977533 9g70:E (3.13) BS01 P9N N/A GO:0004888 ... P24046 N/A
    977534 9g70:E (3.13) BS02 ABU N/A GO:0004888 ... P24046 N/A
    977535 9g70:E (3.13) BS03 ABU N/A GO:0004888 ... P24046 N/A
    977536 9g71:A (2.74) BS01 CLR N/A GO:0005225 ... Q9BSA4 40562935
    977537 9g71:A (2.74) BS02 CLR N/A GO:0005225 ... Q9BSA4 40562935
    977538 9g71:A (2.74) BS03 CLR N/A GO:0005225 ... Q9BSA4 40562935
    977539 9g71:A (2.74) BS04 CPL N/A GO:0005225 ... Q9BSA4 40562935
    977540 9g71:B (2.74) BS01 CPL N/A GO:0005225 ... Q9BSA4 40562935
    977541 9g72:A (1.91) BS01 A1II0 N/A GO:0004176 ... A0A0N1MQL5 38296985
    977542 9g72:B (1.91) BS01 A1II0 N/A GO:0004176 ... A0A0N1MQL5 38296985
    977543 9g72:C (1.91) BS01 A1II0 N/A GO:0004176 ... A0A0N1MQL5 38296985
    977544 9g72:D (1.91) BS01 A1II0 N/A GO:0004176 ... A0A0N1MQL5 38296985
    977545 9g72:E (1.91) BS01 A1II0 N/A GO:0004176 ... A0A0N1MQL5 38296985
    977546 9g72:F (1.91) BS01 A1II0 N/A GO:0004176 ... A0A0N1MQL5 38296985
    977547 9g72:G (1.91) BS01 A1II0 N/A GO:0004176 ... A0A0N1MQL5 38296985
    977548 9g72:H (1.91) BS01 A1II0 N/A GO:0004176 ... A0A0N1MQL5 38296985
    977549 9g72:I (1.91) BS01 A1II0 N/A GO:0004176 ... A0A0N1MQL5 38296985
    977550 9g72:J (1.91) BS01 A1II0 N/A GO:0004176 ... A0A0N1MQL5 38296985
    977551 9g72:K (1.91) BS01 A1II0 N/A GO:0004176 ... A0A0N1MQL5 38296985
    977552 9g72:L (1.91) BS01 A1II0 N/A GO:0004176 ... A0A0N1MQL5 38296985
    977553 9g72:M (1.91) BS01 A1II0 N/A GO:0004176 ... A0A0N1MQL5 38296985
    977554 9g72:N (1.91) BS01 A1II0 N/A GO:0004176 ... A0A0N1MQL5 38296985
    977555 9g74:A (2.75) BS01 dna N/A GO:0000262 ... P54099 40404629
    977556 9g74:A (2.75) BS02 dna N/A GO:0000262 ... P54099 40404629
    977557 9g74:A (2.75) BS03 CA N/A GO:0000262 ... P54099 40404629
    977558 9g74:A (2.75) BS04 DCP N/A GO:0000262 ... P54099 40404629
    977559 9g75:A (2.98) BS01 dna N/A GO:0000262 ... P54099 40404629
    977560 9g75:A (2.98) BS02 dna N/A GO:0000262 ... P54099 40404629
    977561 9g76:A (1.199) BS01 CA N/A N/A P07306 40052708
    977562 9g76:A (1.199) BS02 CA N/A N/A P07306 40052708
    977563 9g76:A (1.199) BS03 CA N/A N/A P07306 40052708
    977564 9g77:A (2.87) BS01 dna N/A GO:0000262 ... P54099 40404629
    977565 9g77:A (2.87) BS02 dna N/A GO:0000262 ... P54099 40404629
    977566 9g77:A (2.87) BS03 CA N/A GO:0000262 ... P54099 40404629
    977567 9g77:A (2.87) BS04 DCP N/A GO:0000262 ... P54099 40404629
    977568 9g77:A (2.87) BS05 CA N/A GO:0000262 ... P54099 40404629
    977569 9g78:A (3.11) BS01 P9N N/A GO:0004888 ... P24046 N/A
    977570 9g78:B (3.11) BS01 P9N N/A GO:0004888 ... P24046 N/A
    977571 9g78:D (3.11) BS01 P9N N/A GO:0004888 ... P24046 N/A
    977572 9g78:E (3.11) BS01 P9N N/A GO:0004888 ... P24046 N/A
    977573 9g7a:A (2.12) BS01 A1IIV N/A GO:0004888 ... P24046 N/A
    977574 9g7a:A (2.12) BS02 A1IIV N/A GO:0004888 ... P24046 N/A
    977575 9g7a:B (2.12) BS01 A1IIV N/A GO:0004888 ... P24046 N/A
    977576 9g7a:B (2.12) BS02 A1IIV N/A GO:0004888 ... P24046 N/A
    977577 9g7a:C (2.12) BS01 A1IIV N/A GO:0004888 ... P24046 N/A
    977578 9g7a:C (2.12) BS02 A1IIV N/A GO:0004888 ... P24046 N/A
    977579 9g7a:D (2.12) BS01 A1IIV N/A GO:0004888 ... P24046 N/A
    977580 9g7a:D (2.12) BS02 A1IIV N/A GO:0004888 ... P24046 N/A
    977581 9g7a:E (2.12) BS01 A1IIV N/A GO:0004888 ... P24046 N/A
    977582 9g7a:E (2.12) BS02 A1IIV N/A GO:0004888 ... P24046 N/A
    977583 9g7b:A (2.18) BS01 ABU N/A GO:0004888 ... P24046 N/A
    977584 9g7b:A (2.18) BS02 A1IIV N/A GO:0004888 ... P24046 N/A
    977585 9g7b:A (2.18) BS03 A1IIV N/A GO:0004888 ... P24046 N/A
    977586 9g7b:B (2.18) BS01 A1IIV N/A GO:0004888 ... P24046 N/A
    977587 9g7b:B (2.18) BS02 ABU N/A GO:0004888 ... P24046 N/A
    977588 9g7b:B (2.18) BS03 A1IIV N/A GO:0004888 ... P24046 N/A
    977589 9g7b:C (2.18) BS01 A1IIV N/A GO:0004888 ... P24046 N/A
    977590 9g7b:C (2.18) BS02 ABU N/A GO:0004888 ... P24046 N/A
    977591 9g7b:C (2.18) BS03 A1IIV N/A GO:0004888 ... P24046 N/A
    977592 9g7b:D (2.18) BS01 A1IIV N/A GO:0004888 ... P24046 N/A
    977593 9g7b:D (2.18) BS02 ABU N/A GO:0004888 ... P24046 N/A
    977594 9g7b:D (2.18) BS03 A1IIV N/A GO:0004888 ... P24046 N/A
    977595 9g7b:E (2.18) BS01 A1IIV N/A GO:0004888 ... P24046 N/A
    977596 9g7b:E (2.18) BS02 ABU N/A GO:0004888 ... P24046 N/A
    977597 9g7b:E (2.18) BS03 A1IIV N/A GO:0004888 ... P24046 N/A
    977598 9g7d:A (1.588) BS01 CA N/A N/A P07306 40052708
    977599 9g7d:A (1.588) BS02 CA N/A N/A P07306 40052708
    977600 9g7d:A (1.588) BS03 CA N/A N/A P07306 40052708

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).