SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    978001 9g98:A (2.1) BS03 BEM N/A N/A A0A7I9C8Z1 40102416
    978002 9g98:A (2.1) BS04 MAV N/A N/A A0A7I9C8Z1 40102416
    978003 9g98:A (2.1) BS05 BEM N/A N/A A0A7I9C8Z1 40102416
    978004 9g9a:A (2.83) BS01 rna N/A N/A E6LHV7 39817514
    978005 9g9a:D (2.83) BS01 rna N/A N/A E6LHV5 39817514
    978006 9g9a:E (2.83) BS01 rna N/A N/A E6LHV5 39817514
    978007 9g9a:F (2.83) BS01 rna N/A N/A E6LHV5 39817514
    978008 9g9a:G (2.83) BS01 rna N/A N/A E6LHV4 39817514
    978009 9g9a:H (2.83) BS01 rna N/A N/A E6LHV3 39817514
    978010 9g9b:A (3.07) BS01 rna N/A N/A E6LHV7 39817514
    978011 9g9b:D (3.07) BS01 rna N/A N/A E6LHV5 39817514
    978012 9g9b:E (3.07) BS01 rna N/A N/A E6LHV5 39817514
    978013 9g9b:F (3.07) BS01 rna N/A N/A E6LHV5 39817514
    978014 9g9b:G (3.07) BS01 rna N/A N/A E6LHV4 39817514
    978015 9g9b:H (3.07) BS01 rna N/A N/A E6LHV3 39817514
    978016 9g9b:I (3.07) BS01 rna N/A N/A E6LHV5 39817514
    978017 9g9c:A (2.72) BS01 rna N/A N/A E6LHV7 39817514
    978018 9g9c:A (2.72) BS02 rna N/A N/A E6LHV7 39817514
    978019 9g9c:B (2.72) BS01 rna N/A N/A E6LHV6 39817514
    978020 9g9c:C (2.72) BS01 rna N/A N/A E6LHV6 39817514
    978021 9g9c:D (2.72) BS01 rna N/A N/A E6LHV5 39817514
    978022 9g9c:D (2.72) BS02 rna N/A N/A E6LHV5 39817514
    978023 9g9c:E (2.72) BS01 rna N/A N/A E6LHV5 39817514
    978024 9g9c:E (2.72) BS02 rna N/A N/A E6LHV5 39817514
    978025 9g9c:F (2.72) BS01 rna N/A N/A E6LHV5 39817514
    978026 9g9c:F (2.72) BS02 rna N/A N/A E6LHV5 39817514
    978027 9g9c:G (2.72) BS01 rna N/A N/A E6LHV4 39817514
    978028 9g9c:G (2.72) BS02 rna N/A N/A E6LHV4 39817514
    978029 9g9c:H (2.72) BS01 rna N/A N/A E6LHV3 39817514
    978030 9g9c:H (2.72) BS02 rna N/A N/A E6LHV3 39817514
    978031 9g9d:A (2.9) BS01 rna N/A N/A E6LHV7 39817514
    978032 9g9d:A (2.9) BS02 rna N/A N/A E6LHV7 39817514
    978033 9g9d:B (2.9) BS01 rna N/A N/A E6LHV6 39817514
    978034 9g9d:C (2.9) BS01 rna N/A N/A E6LHV6 39817514
    978035 9g9d:D (2.9) BS01 rna N/A N/A E6LHV5 39817514
    978036 9g9d:D (2.9) BS02 rna N/A N/A E6LHV5 39817514
    978037 9g9d:E (2.9) BS01 rna N/A N/A E6LHV5 39817514
    978038 9g9d:E (2.9) BS02 rna N/A N/A E6LHV5 39817514
    978039 9g9d:F (2.9) BS01 rna N/A N/A E6LHV5 39817514
    978040 9g9d:F (2.9) BS02 rna N/A N/A E6LHV5 39817514
    978041 9g9d:G (2.9) BS01 rna N/A N/A E6LHV4 39817514
    978042 9g9d:G (2.9) BS02 rna N/A N/A E6LHV4 39817514
    978043 9g9d:H (2.9) BS01 rna N/A N/A E6LHV3 39817514
    978044 9g9d:H (2.9) BS02 rna N/A N/A E6LHV3 39817514
    978045 9g9d:I (2.9) BS01 rna N/A N/A E6LHV5 39817514
    978046 9g9d:I (2.9) BS02 rna N/A N/A E6LHV5 39817514
    978047 9g9d:J (2.9) BS01 rna N/A N/A E6LHV6 39817514
    978048 9g9e:A (2.87) BS01 ZAN N/A N/A E6LHV7 39817514
    978049 9g9e:A (2.87) BS02 ZAN N/A N/A E6LHV7 39817514
    978050 9g9e:A (2.87) BS03 MG N/A N/A E6LHV7 39817514
    978051 9g9e:A (2.87) BS04 MG N/A N/A E6LHV7 39817514
    978052 9g9e:D (2.87) BS01 rna N/A N/A E6LHV5 39817514
    978053 9g9e:E (2.87) BS01 rna N/A N/A E6LHV5 39817514
    978054 9g9e:F (2.87) BS01 rna N/A N/A E6LHV5 39817514
    978055 9g9e:G (2.87) BS01 rna N/A N/A E6LHV4 39817514
    978056 9g9e:G (2.87) BS02 ZAN N/A N/A E6LHV4 39817514
    978057 9g9e:H (2.87) BS01 rna N/A N/A E6LHV3 39817514
    978058 9g9f:A (2.93) BS01 rna N/A N/A E6LHV7 39817514
    978059 9g9f:A (2.93) BS02 ZAN N/A N/A E6LHV7 39817514
    978060 9g9f:A (2.93) BS03 ZAN N/A N/A E6LHV7 39817514
    978061 9g9f:A (2.93) BS04 MG N/A N/A E6LHV7 39817514
    978062 9g9f:B (2.93) BS01 rna N/A N/A E6LHV6 39817514
    978063 9g9f:C (2.93) BS01 rna N/A N/A E6LHV6 39817514
    978064 9g9f:D (2.93) BS01 rna N/A N/A E6LHV5 39817514
    978065 9g9f:D (2.93) BS02 rna N/A N/A E6LHV5 39817514
    978066 9g9f:E (2.93) BS01 rna N/A N/A E6LHV5 39817514
    978067 9g9f:E (2.93) BS02 rna N/A N/A E6LHV5 39817514
    978068 9g9f:F (2.93) BS01 rna N/A N/A E6LHV5 39817514
    978069 9g9f:F (2.93) BS02 rna N/A N/A E6LHV5 39817514
    978070 9g9f:G (2.93) BS01 rna N/A N/A E6LHV4 39817514
    978071 9g9f:G (2.93) BS02 rna N/A N/A E6LHV4 39817514
    978072 9g9f:H (2.93) BS01 rna N/A N/A E6LHV3 39817514
    978073 9g9f:H (2.93) BS02 rna N/A N/A E6LHV3 39817514
    978074 9g9g:A (3.38) BS01 rna N/A N/A E6LHV7 39817514
    978075 9g9g:A (3.38) BS02 rna N/A N/A E6LHV7 39817514
    978076 9g9g:A (3.38) BS03 ZAN N/A N/A E6LHV7 39817514
    978077 9g9g:A (3.38) BS04 ZAN N/A N/A E6LHV7 39817514
    978078 9g9g:A (3.38) BS05 MG N/A N/A E6LHV7 39817514
    978079 9g9g:A (3.38) BS06 MG N/A N/A E6LHV7 39817514
    978080 9g9g:B (3.38) BS01 rna N/A N/A E6LHV6 39817514
    978081 9g9g:C (3.38) BS01 rna N/A N/A E6LHV6 39817514
    978082 9g9g:D (3.38) BS01 rna N/A N/A E6LHV5 39817514
    978083 9g9g:D (3.38) BS02 rna N/A N/A E6LHV5 39817514
    978084 9g9g:E (3.38) BS01 rna N/A N/A E6LHV5 39817514
    978085 9g9g:E (3.38) BS02 rna N/A N/A E6LHV5 39817514
    978086 9g9g:F (3.38) BS01 rna N/A N/A E6LHV5 39817514
    978087 9g9g:F (3.38) BS02 rna N/A N/A E6LHV5 39817514
    978088 9g9g:G (3.38) BS01 rna N/A N/A E6LHV4 39817514
    978089 9g9g:G (3.38) BS02 rna N/A N/A E6LHV4 39817514
    978090 9g9g:H (3.38) BS01 rna N/A N/A E6LHV3 39817514
    978091 9g9g:H (3.38) BS02 rna N/A N/A E6LHV3 39817514
    978092 9g9g:I (3.38) BS01 rna N/A N/A E6LHV5 39817514
    978093 9g9g:I (3.38) BS02 rna N/A N/A E6LHV5 39817514
    978094 9g9g:J (3.38) BS01 rna N/A N/A E6LHV6 39817514
    978095 9g9h:A (2.99) BS01 rna N/A N/A E6LHV7 39817514
    978096 9g9h:A (2.99) BS02 rna N/A N/A E6LHV7 39817514
    978097 9g9h:A (2.99) BS03 A1II9 N/A N/A E6LHV7 39817514
    978098 9g9h:A (2.99) BS04 ANP N/A N/A E6LHV7 39817514
    978099 9g9h:B (2.99) BS01 rna N/A N/A E6LHV6 39817514
    978100 9g9h:C (2.99) BS01 rna N/A N/A E6LHV6 39817514
    978101 9g9h:D (2.99) BS01 rna N/A N/A E6LHV5 39817514
    978102 9g9h:D (2.99) BS02 rna N/A N/A E6LHV5 39817514
    978103 9g9h:E (2.99) BS01 rna N/A N/A E6LHV5 39817514
    978104 9g9h:E (2.99) BS02 rna N/A N/A E6LHV5 39817514
    978105 9g9h:F (2.99) BS01 rna N/A N/A E6LHV5 39817514
    978106 9g9h:F (2.99) BS02 rna N/A N/A E6LHV5 39817514
    978107 9g9h:G (2.99) BS01 rna N/A N/A E6LHV4 39817514
    978108 9g9h:G (2.99) BS02 rna N/A N/A E6LHV4 39817514
    978109 9g9h:H (2.99) BS01 rna N/A N/A E6LHV3 39817514
    978110 9g9h:H (2.99) BS02 rna N/A N/A E6LHV3 39817514
    978111 9g9i:A (3.31) BS01 rna N/A N/A E6LHV7 39817514
    978112 9g9i:A (3.31) BS02 rna N/A N/A E6LHV7 39817514
    978113 9g9i:A (3.31) BS03 A1II9 N/A N/A E6LHV7 39817514
    978114 9g9i:A (3.31) BS04 ANP N/A N/A E6LHV7 39817514
    978115 9g9i:A (3.31) BS05 MG N/A N/A E6LHV7 39817514
    978116 9g9i:D (3.31) BS01 rna N/A N/A E6LHV5 39817514
    978117 9g9i:D (3.31) BS02 rna N/A N/A E6LHV5 39817514
    978118 9g9i:E (3.31) BS01 rna N/A N/A E6LHV5 39817514
    978119 9g9i:E (3.31) BS02 rna N/A N/A E6LHV5 39817514
    978120 9g9i:F (3.31) BS01 rna N/A N/A E6LHV5 39817514
    978121 9g9i:F (3.31) BS02 rna N/A N/A E6LHV5 39817514
    978122 9g9i:G (3.31) BS01 rna N/A N/A E6LHV4 39817514
    978123 9g9i:G (3.31) BS02 rna N/A N/A E6LHV4 39817514
    978124 9g9i:G (3.31) BS03 A1II9 N/A N/A E6LHV4 39817514
    978125 9g9i:H (3.31) BS01 rna N/A N/A E6LHV3 39817514
    978126 9g9j:A (3.05) BS01 A1II9 N/A N/A E6LHV7 39817514
    978127 9g9j:A (3.05) BS02 ANP N/A N/A E6LHV7 39817514
    978128 9g9j:A (3.05) BS03 MN N/A N/A E6LHV7 39817514
    978129 9g9j:A (3.05) BS04 MN N/A N/A E6LHV7 39817514
    978130 9g9j:D (3.05) BS01 rna N/A N/A E6LHV5 39817514
    978131 9g9j:E (3.05) BS01 rna N/A N/A E6LHV5 39817514
    978132 9g9j:F (3.05) BS01 rna N/A N/A E6LHV5 39817514
    978133 9g9j:G (3.05) BS01 rna N/A N/A E6LHV4 39817514
    978134 9g9j:G (3.05) BS02 A1II9 N/A N/A E6LHV4 39817514
    978135 9g9j:H (3.05) BS01 rna N/A N/A E6LHV3 39817514
    978136 9g9k:A (3.34) BS01 rna N/A N/A E6LHV7 39817514
    978137 9g9k:A (3.34) BS02 rna N/A N/A E6LHV7 39817514
    978138 9g9k:A (3.34) BS03 ZAN N/A N/A E6LHV7 39817514
    978139 9g9k:A (3.34) BS04 ZAN N/A N/A E6LHV7 39817514
    978140 9g9k:A (3.34) BS05 MG N/A N/A E6LHV7 39817514
    978141 9g9k:C (3.34) BS01 rna N/A N/A E6LHV6 39817514
    978142 9g9k:D (3.34) BS01 rna N/A N/A E6LHV5 39817514
    978143 9g9k:D (3.34) BS02 rna N/A N/A E6LHV5 39817514
    978144 9g9k:E (3.34) BS01 rna N/A N/A E6LHV5 39817514
    978145 9g9k:E (3.34) BS02 rna N/A N/A E6LHV5 39817514
    978146 9g9k:F (3.34) BS01 rna N/A N/A E6LHV5 39817514
    978147 9g9k:F (3.34) BS02 rna N/A N/A E6LHV5 39817514
    978148 9g9k:G (3.34) BS01 rna N/A N/A E6LHV4 39817514
    978149 9g9k:G (3.34) BS02 rna N/A N/A E6LHV4 39817514
    978150 9g9k:H (3.34) BS01 rna N/A N/A E6LHV3 39817514
    978151 9g9k:I (3.34) BS01 rna N/A N/A E6LHV5 39817514
    978152 9g9k:I (3.34) BS02 rna N/A N/A E6LHV5 39817514
    978153 9g9l:A (4.63) BS01 dna N/A GO:0000460 ... P78527 40328761
    978154 9g9l:B (4.63) BS01 peptide N/A GO:0000723 ... P12956 40328761
    978155 9g9l:B (4.63) BS02 dna N/A GO:0000723 ... P12956 40328761
    978156 9g9l:C (4.63) BS01 dna N/A GO:0000723 ... P13010 40328761
    978157 9g9l:C (4.63) BS02 dna N/A GO:0000723 ... P13010 40328761
    978158 9g9q:A (2.03) BS01 HEM N/A GO:0004497 ... Q0SCI3 39307304
    978159 9g9q:A (2.03) BS02 ANN N/A GO:0004497 ... Q0SCI3 39307304
    978160 9g9q:B (2.03) BS01 HEM N/A GO:0004497 ... Q0SCI3 39307304
    978161 9g9q:B (2.03) BS02 ANN N/A GO:0004497 ... Q0SCI3 39307304
    978162 9g9r:A (1.65) BS01 HEM N/A GO:0004497 ... Q0SCI3 39307304
    978163 9g9r:A (1.65) BS02 EGM N/A GO:0004497 ... Q0SCI3 39307304
    978164 9g9r:B (1.65) BS01 HEM N/A GO:0004497 ... Q0SCI3 39307304
    978165 9g9r:B (1.65) BS02 EGM N/A GO:0004497 ... Q0SCI3 39307304
    978166 9g9s:A (1.85) BS01 HEM N/A GO:0004497 ... Q0SCI3 39307304
    978167 9g9s:A (1.85) BS02 TWO N/A GO:0004497 ... Q0SCI3 39307304
    978168 9g9s:B (1.85) BS01 HEM N/A GO:0004497 ... Q0SCI3 39307304
    978169 9g9s:B (1.85) BS02 TWO N/A GO:0004497 ... Q0SCI3 39307304
    978170 9g9t:A (1.8) BS01 A1IJD N/A GO:0005743 ... S8EQL3 40389671
    978171 9g9t:A (1.8) BS02 A1IJD N/A GO:0005743 ... S8EQL3 40389671
    978172 9g9t:A (1.8) BS03 HEM N/A GO:0005743 ... S8EQL3 40389671
    978173 9g9t:A (1.8) BS04 HEM N/A GO:0005743 ... S8EQL3 40389671
    978174 9g9t:A (1.8) BS05 MG N/A GO:0005743 ... S8EQL3 40389671
    978175 9g9t:B (1.8) BS01 HEC N/A GO:0005743 ... A0A125YTU2 40389671
    978176 9g9t:D (1.8) BS01 ZN N/A GO:0004222 ... A0A125YS93 40389671
    978177 9g9t:a (1.8) BS01 A1IJD N/A GO:0005743 ... S8EQL3 40389671
    978178 9g9t:a (1.8) BS02 A1IJD N/A GO:0005743 ... S8EQL3 40389671
    978179 9g9t:a (1.8) BS03 HEM N/A GO:0005743 ... S8EQL3 40389671
    978180 9g9t:a (1.8) BS04 HEM N/A GO:0005743 ... S8EQL3 40389671
    978181 9g9t:a (1.8) BS05 MG N/A GO:0005743 ... S8EQL3 40389671
    978182 9g9t:b (1.8) BS01 HEC N/A GO:0005743 ... A0A125YTU2 40389671
    978183 9g9t:d (1.8) BS01 ZN N/A GO:0004222 ... A0A125YS93 40389671
    978184 9g9u:A (1.9) BS01 ZN N/A N/A N/A N/A
    978185 9g9u:B (1.9) BS01 ZN N/A N/A N/A N/A
    978186 9g9v:A (3.32) BS01 Y01 N/A GO:0005267 ... Q9NPC2 39637865
    978187 9g9v:B (3.32) BS01 Y01 N/A GO:0005267 ... Q9NPC2 39637865
    978188 9g9w:A (2.48) BS01 Y01 N/A GO:0005267 ... Q9NPC2 39637865
    978189 9g9w:A (2.48) BS02 Y01 N/A GO:0005267 ... Q9NPC2 39637865
    978190 9g9w:A (2.48) BS03 Y01 N/A GO:0005267 ... Q9NPC2 39637865
    978191 9g9w:B (2.48) BS01 Y01 N/A GO:0005267 ... Q9NPC2 39637865
    978192 9g9w:B (2.48) BS02 Y01 N/A GO:0005267 ... Q9NPC2 39637865
    978193 9g9w:B (2.48) BS03 Y01 N/A GO:0005267 ... Q9NPC2 39637865
    978194 9g9x:A (3.13) BS01 Y01 N/A GO:0005252 ... O14649 39637865
    978195 9g9x:A (3.13) BS02 Y01 N/A GO:0005252 ... O14649 39637865
    978196 9g9x:A (3.13) BS03 Y01 N/A GO:0005252 ... O14649 39637865
    978197 9g9x:B (3.13) BS01 Y01 N/A GO:0005252 ... O14649 39637865
    978198 9g9x:B (3.13) BS02 Y01 N/A GO:0005252 ... O14649 39637865
    978199 9g9x:B (3.13) BS03 Y01 N/A GO:0005252 ... O14649 39637865
    978200 9g9y:B (4.91) BS01 SF4 N/A GO:0005506 ... A1B497 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).