SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    978201 9g9y:B (4.91) BS02 U10 N/A GO:0005506 ... A1B497 N/A
    978202 9g9y:B1 (4.91) BS01 SF4 N/A GO:0005506 ... A1B497 N/A
    978203 9g9y:B1 (4.91) BS02 U10 N/A GO:0005506 ... A1B497 N/A
    978204 9g9y:D (4.91) BS01 SF4 N/A GO:0005886 ... A1B495 N/A
    978205 9g9y:D (4.91) BS02 CA N/A GO:0005886 ... A1B495 N/A
    978206 9g9y:D1 (4.91) BS01 SF4 N/A GO:0005886 ... A1B495 N/A
    978207 9g9y:D1 (4.91) BS02 CA N/A GO:0005886 ... A1B495 N/A
    978208 9g9y:E (4.91) BS01 FES N/A GO:0003954 ... A1B494 N/A
    978209 9g9y:E1 (4.91) BS01 FES N/A GO:0003954 ... A1B494 N/A
    978210 9g9y:F (4.91) BS01 SF4 N/A GO:0005737 ... A1B491 N/A
    978211 9g9y:F (4.91) BS02 FMN N/A GO:0005737 ... A1B491 N/A
    978212 9g9y:F1 (4.91) BS01 FMN N/A GO:0005737 ... A1B491 N/A
    978213 9g9y:F1 (4.91) BS02 SF4 N/A GO:0005737 ... A1B491 N/A
    978214 9g9y:G (4.91) BS01 SF4 N/A GO:0008137 ... A1B489 N/A
    978215 9g9y:G (4.91) BS02 SF4 N/A GO:0008137 ... A1B489 N/A
    978216 9g9y:G (4.91) BS03 FES N/A GO:0008137 ... A1B489 N/A
    978217 9g9y:G1 (4.91) BS01 FES N/A GO:0008137 ... A1B489 N/A
    978218 9g9y:G1 (4.91) BS02 SF4 N/A GO:0008137 ... A1B489 N/A
    978219 9g9y:G1 (4.91) BS03 SF4 N/A GO:0008137 ... A1B489 N/A
    978220 9g9y:H (4.91) BS01 U10 N/A GO:0003954 ... A1B487 N/A
    978221 9g9y:H1 (4.91) BS01 U10 N/A GO:0003954 ... A1B487 N/A
    978222 9g9y:I (4.91) BS01 SF4 N/A GO:0003954 ... A1B486 N/A
    978223 9g9y:I (4.91) BS02 SF4 N/A GO:0003954 ... A1B486 N/A
    978224 9g9y:I1 (4.91) BS01 SF4 N/A GO:0003954 ... A1B486 N/A
    978225 9g9y:I1 (4.91) BS02 SF4 N/A GO:0003954 ... A1B486 N/A
    978226 9g9y:L (4.91) BS01 P5S N/A GO:0003954 ... A1B481 N/A
    978227 9g9y:L1 (4.91) BS01 P5S N/A GO:0003954 ... A1B481 N/A
    978228 9g9y:R (4.91) BS01 ZN N/A N/A A1B357 N/A
    978229 9g9y:R1 (4.91) BS01 ZN N/A N/A A1B357 N/A
    978230 9g9y:a (4.91) BS01 HEM N/A GO:0005886 ... A1B4F3 N/A
    978231 9g9y:a (4.91) BS02 U10 N/A GO:0005886 ... A1B4F3 N/A
    978232 9g9y:a (4.91) BS03 HEM N/A GO:0005886 ... A1B4F3 N/A
    978233 9g9y:a (4.91) BS04 U10 N/A GO:0005886 ... A1B4F3 N/A
    978234 9g9y:b (4.91) BS01 CA N/A N/A A1B4F4 N/A
    978235 9g9y:b (4.91) BS02 HEC N/A N/A A1B4F4 N/A
    978236 9g9y:c (4.91) BS01 DU0 N/A GO:0005886 ... A1B4F2 N/A
    978237 9g9y:c (4.91) BS02 FES N/A GO:0005886 ... A1B4F2 N/A
    978238 9g9y:d (4.91) BS01 U10 N/A GO:0005886 ... A1B4F3 N/A
    978239 9g9y:d (4.91) BS02 U10 N/A GO:0005886 ... A1B4F3 N/A
    978240 9g9y:d (4.91) BS03 HEM N/A GO:0005886 ... A1B4F3 N/A
    978241 9g9y:d (4.91) BS04 U10 N/A GO:0005886 ... A1B4F3 N/A
    978242 9g9y:d (4.91) BS05 HEM N/A GO:0005886 ... A1B4F3 N/A
    978243 9g9y:e (4.91) BS01 CA N/A N/A A1B4F4 N/A
    978244 9g9y:e (4.91) BS02 HEC N/A N/A A1B4F4 N/A
    978245 9g9y:f (4.91) BS01 DU0 N/A GO:0005886 ... A1B4F2 N/A
    978246 9g9y:f (4.91) BS02 FES N/A GO:0005886 ... A1B4F2 N/A
    978247 9g9y:g (4.91) BS01 HEA N/A GO:0004129 ... A1B3D7 N/A
    978248 9g9y:g (4.91) BS02 CU N/A GO:0004129 ... A1B3D7 N/A
    978249 9g9y:g (4.91) BS03 CA N/A GO:0004129 ... A1B3D7 N/A
    978250 9g9y:g (4.91) BS04 HEA N/A GO:0004129 ... A1B3D7 N/A
    978251 9g9y:g (4.91) BS05 MN N/A GO:0004129 ... A1B3D7 N/A
    978252 9g9y:h (4.91) BS01 CUA N/A N/A A1BA41 N/A
    978253 9g9y:i (4.91) BS01 ZN N/A GO:0004129 ... A1BA37 N/A
    978254 9g9y:k (4.91) BS01 CA N/A GO:0004129 ... A1B3D7 N/A
    978255 9g9y:k (4.91) BS02 HEA N/A GO:0004129 ... A1B3D7 N/A
    978256 9g9y:k (4.91) BS03 CU N/A GO:0004129 ... A1B3D7 N/A
    978257 9g9y:k (4.91) BS04 HEA N/A GO:0004129 ... A1B3D7 N/A
    978258 9g9y:k (4.91) BS05 MN N/A GO:0004129 ... A1B3D7 N/A
    978259 9g9y:l (4.91) BS01 CUA N/A N/A A1BA41 N/A
    978260 9g9y:m (4.91) BS01 ZN N/A GO:0004129 ... A1BA37 N/A
    978261 9g9z:A (4.03) BS01 DU0 N/A GO:0005886 ... A1B498 N/A
    978262 9g9z:A (4.03) BS02 U10 N/A GO:0005886 ... A1B498 N/A
    978263 9g9z:B (4.03) BS01 SF4 N/A GO:0005506 ... A1B497 N/A
    978264 9g9z:B (4.03) BS02 U10 N/A GO:0005506 ... A1B497 N/A
    978265 9g9z:D (4.03) BS01 SF4 N/A GO:0005886 ... A1B495 N/A
    978266 9g9z:D (4.03) BS02 CA N/A GO:0005886 ... A1B495 N/A
    978267 9g9z:E (4.03) BS01 FES N/A GO:0003954 ... A1B494 N/A
    978268 9g9z:F (4.03) BS01 SF4 N/A GO:0005737 ... A1B491 N/A
    978269 9g9z:F (4.03) BS02 FMN N/A GO:0005737 ... A1B491 N/A
    978270 9g9z:G (4.03) BS01 FES N/A GO:0008137 ... A1B489 N/A
    978271 9g9z:G (4.03) BS02 SF4 N/A GO:0008137 ... A1B489 N/A
    978272 9g9z:G (4.03) BS03 SF4 N/A GO:0008137 ... A1B489 N/A
    978273 9g9z:H (4.03) BS01 U10 N/A GO:0003954 ... A1B487 N/A
    978274 9g9z:H (4.03) BS02 DU0 N/A GO:0003954 ... A1B487 N/A
    978275 9g9z:H (4.03) BS03 T7X N/A GO:0003954 ... A1B487 N/A
    978276 9g9z:I (4.03) BS01 SF4 N/A GO:0003954 ... A1B486 N/A
    978277 9g9z:I (4.03) BS02 SF4 N/A GO:0003954 ... A1B486 N/A
    978278 9g9z:J (4.03) BS01 DU0 N/A GO:0005886 ... A1B483 N/A
    978279 9g9z:J (4.03) BS02 T7X N/A GO:0005886 ... A1B483 N/A
    978280 9g9z:L (4.03) BS01 P5S N/A GO:0003954 ... A1B481 N/A
    978281 9g9z:M (4.03) BS01 DU0 N/A GO:0003954 ... A1B480 N/A
    978282 9g9z:M (4.03) BS02 DU0 N/A GO:0003954 ... A1B480 N/A
    978283 9g9z:R (4.03) BS01 ZN N/A N/A A1B357 N/A
    978284 9g9z:a (4.03) BS01 HEM N/A GO:0005886 ... A1B4F3 N/A
    978285 9g9z:a (4.03) BS02 U10 N/A GO:0005886 ... A1B4F3 N/A
    978286 9g9z:a (4.03) BS03 HEM N/A GO:0005886 ... A1B4F3 N/A
    978287 9g9z:a (4.03) BS04 U10 N/A GO:0005886 ... A1B4F3 N/A
    978288 9g9z:b (4.03) BS01 HEC N/A N/A A1B4F4 N/A
    978289 9g9z:b (4.03) BS02 CA N/A N/A A1B4F4 N/A
    978290 9g9z:c (4.03) BS01 DU0 N/A GO:0005886 ... A1B4F2 N/A
    978291 9g9z:c (4.03) BS02 FES N/A GO:0005886 ... A1B4F2 N/A
    978292 9g9z:c (4.03) BS03 DU0 N/A GO:0005886 ... A1B4F2 N/A
    978293 9g9z:d (4.03) BS01 HEM N/A GO:0005886 ... A1B4F3 N/A
    978294 9g9z:d (4.03) BS02 HEM N/A GO:0005886 ... A1B4F3 N/A
    978295 9g9z:d (4.03) BS03 U10 N/A GO:0005886 ... A1B4F3 N/A
    978296 9g9z:d (4.03) BS04 U10 N/A GO:0005886 ... A1B4F3 N/A
    978297 9g9z:e (4.03) BS01 CA N/A N/A A1B4F4 N/A
    978298 9g9z:e (4.03) BS02 HEC N/A N/A A1B4F4 N/A
    978299 9g9z:f (4.03) BS01 FES N/A GO:0005886 ... A1B4F2 N/A
    978300 9g9z:g (4.03) BS01 HEA N/A GO:0004129 ... A1B3D7 N/A
    978301 9g9z:g (4.03) BS02 CU N/A GO:0004129 ... A1B3D7 N/A
    978302 9g9z:g (4.03) BS03 CA N/A GO:0004129 ... A1B3D7 N/A
    978303 9g9z:g (4.03) BS04 HEA N/A GO:0004129 ... A1B3D7 N/A
    978304 9g9z:g (4.03) BS05 MN N/A GO:0004129 ... A1B3D7 N/A
    978305 9g9z:h (4.03) BS01 CUA N/A N/A A1BA41 N/A
    978306 9g9z:i (4.03) BS01 ZN N/A GO:0004129 ... A1BA37 N/A
    978307 9g9z:i (4.03) BS02 DU0 N/A GO:0004129 ... A1BA37 N/A
    978308 9ga1:A (2.8) BS01 BGC N/A N/A Q6MQN4 40617869
    978309 9ga1:A (2.8) BS02 OC9 N/A N/A Q6MQN4 40617869
    978310 9ga1:B (2.8) BS01 BGC N/A N/A Q6MQN4 40617869
    978311 9ga1:C (2.8) BS01 BGC N/A N/A Q6MQN4 40617869
    978312 9ga1:C (2.8) BS02 OC9 N/A N/A Q6MQN4 40617869
    978313 9ga1:D (2.8) BS01 OC9 N/A N/A Q6MQN4 40617869
    978314 9ga1:D (2.8) BS02 BGC N/A N/A Q6MQN4 40617869
    978315 9ga1:E (2.8) BS01 BGC N/A N/A Q6MQN4 40617869
    978316 9ga1:E (2.8) BS02 OC9 N/A N/A Q6MQN4 40617869
    978317 9ga1:E (2.8) BS03 BGC N/A N/A Q6MQN4 40617869
    978318 9ga2:A (4.9) BS01 ZN N/A GO:0003677 ... P63381 40210888
    978319 9ga2:B (4.9) BS01 ZN N/A GO:0003677 ... P63381 40210888
    978320 9ga2:B (4.9) BS02 ZN N/A GO:0003677 ... P63381 40210888
    978321 9ga3:A (4.3) BS01 dna N/A GO:0003677 ... P9WQK7 40210888
    978322 9ga3:A (4.3) BS02 dna N/A GO:0003677 ... P9WQK7 40210888
    978323 9ga3:A (4.3) BS03 ZN N/A GO:0003677 ... P9WQK7 40210888
    978324 9ga3:A (4.3) BS04 ZN N/A GO:0003677 ... P9WQK7 40210888
    978325 9ga3:A (4.3) BS05 ADP N/A GO:0003677 ... P9WQK7 40210888
    978326 9ga3:B (4.3) BS01 dna N/A GO:0003677 ... P9WQK7 40210888
    978327 9ga3:B (4.3) BS02 ZN N/A GO:0003677 ... P9WQK7 40210888
    978328 9ga3:B (4.3) BS03 ZN N/A GO:0003677 ... P9WQK7 40210888
    978329 9ga3:B (4.3) BS04 ZN N/A GO:0003677 ... P9WQK7 40210888
    978330 9ga3:B (4.3) BS05 ADP N/A GO:0003677 ... P9WQK7 40210888
    978331 9ga3:E (4.3) BS01 dna N/A GO:0000715 ... P9WFC7 40210888
    978332 9ga4:A (3.7) BS01 dna N/A GO:0003677 ... P9WQK7 40210888
    978333 9ga4:A (3.7) BS02 dna N/A GO:0003677 ... P9WQK7 40210888
    978334 9ga4:A (3.7) BS03 ZN N/A GO:0003677 ... P9WQK7 40210888
    978335 9ga4:A (3.7) BS04 ZN N/A GO:0003677 ... P9WQK7 40210888
    978336 9ga4:B (3.7) BS01 dna N/A GO:0003677 ... P9WQK7 40210888
    978337 9ga4:B (3.7) BS02 dna N/A GO:0003677 ... P9WQK7 40210888
    978338 9ga4:B (3.7) BS03 ZN N/A GO:0003677 ... P9WQK7 40210888
    978339 9ga4:B (3.7) BS04 ZN N/A GO:0003677 ... P9WQK7 40210888
    978340 9ga4:C (3.7) BS01 dna N/A GO:0000715 ... P9WFC7 40210888
    978341 9ga4:D (3.7) BS01 dna N/A GO:0000715 ... P9WFC7 40210888
    978342 9ga5:A (3.2) BS01 dna N/A GO:0003677 ... P9WQK7 40210888
    978343 9ga5:A (3.2) BS02 dna N/A GO:0003677 ... P9WQK7 40210888
    978344 9ga5:A (3.2) BS03 ZN N/A GO:0003677 ... P9WQK7 40210888
    978345 9ga5:A (3.2) BS04 ZN N/A GO:0003677 ... P9WQK7 40210888
    978346 9ga5:A (3.2) BS05 ADP N/A GO:0003677 ... P9WQK7 40210888
    978347 9ga5:B (3.2) BS01 dna N/A GO:0003677 ... P9WQK7 40210888
    978348 9ga5:B (3.2) BS02 dna N/A GO:0003677 ... P9WQK7 40210888
    978349 9ga5:B (3.2) BS03 ZN N/A GO:0003677 ... P9WQK7 40210888
    978350 9ga5:B (3.2) BS04 ZN N/A GO:0003677 ... P9WQK7 40210888
    978351 9ga5:B (3.2) BS05 ADP N/A GO:0003677 ... P9WQK7 40210888
    978352 9ga6:A (1.27) BS01 CA N/A GO:0000122 ... P09525 40157693
    978353 9ga6:A (1.27) BS02 CA N/A GO:0000122 ... P09525 40157693
    978354 9ga6:A (1.27) BS03 CA N/A GO:0000122 ... P09525 40157693
    978355 9ga7:A (1.446) BS01 CA N/A GO:0000122 ... P09525 40157693
    978356 9ga8:A (1.5) BS01 CA N/A GO:0000122 ... P09525 40157693
    978357 9ga8:A (1.5) BS02 CA N/A GO:0000122 ... P09525 40157693
    978358 9ga8:A (1.5) BS03 CA N/A GO:0000122 ... P09525 40157693
    978359 9gab:A (1.65) BS01 A1IJB N/A N/A A5I3U9 40650973
    978360 9gab:A (1.65) BS02 A1IJB N/A N/A A5I3U9 40650973
    978361 9gab:B (1.65) BS01 A1IJB N/A N/A A5I3U9 40650973
    978362 9gab:B (1.65) BS02 A1IJB N/A N/A A5I3U9 40650973
    978363 9gab:C (1.65) BS01 A1IJB N/A N/A A5I3U9 40650973
    978364 9gab:C (1.65) BS02 A1IJB N/A N/A A5I3U9 40650973
    978365 9gab:D (1.65) BS01 A1IJB N/A N/A A5I3U9 40650973
    978366 9gab:D (1.65) BS02 A1IJB N/A N/A A5I3U9 40650973
    978367 9gab:E (1.65) BS01 A1IJB N/A N/A A5I3U9 40650973
    978368 9gab:E (1.65) BS02 A1IJB N/A N/A A5I3U9 40650973
    978369 9gab:F (1.65) BS01 A1IJB N/A N/A A5I3U9 40650973
    978370 9gab:F (1.65) BS02 A1IJB N/A N/A A5I3U9 40650973
    978371 9gac:A (1.9) BS01 GLY 3.5.1.26 GO:0003948 ... Q47898 10490104
    978372 9gac:C (1.9) BS01 GLY 3.5.1.26 GO:0003948 ... Q47898 10490104
    978373 9gae:A (3.0) BS01 DU0 N/A GO:0005886 ... A1B498 N/A
    978374 9gae:B (3.0) BS01 SF4 N/A GO:0005506 ... A1B497 N/A
    978375 9gae:B (3.0) BS02 U10 N/A GO:0005506 ... A1B497 N/A
    978376 9gae:D (3.0) BS01 SF4 N/A GO:0005886 ... A1B495 N/A
    978377 9gae:D (3.0) BS02 CA N/A GO:0005886 ... A1B495 N/A
    978378 9gae:E (3.0) BS01 FES N/A GO:0003954 ... A1B494 N/A
    978379 9gae:F (3.0) BS01 SF4 N/A GO:0005737 ... A1B491 N/A
    978380 9gae:F (3.0) BS02 FMN N/A GO:0005737 ... A1B491 N/A
    978381 9gae:G (3.0) BS01 FES N/A GO:0008137 ... A1B489 N/A
    978382 9gae:G (3.0) BS02 SF4 N/A GO:0008137 ... A1B489 N/A
    978383 9gae:G (3.0) BS03 SF4 N/A GO:0008137 ... A1B489 N/A
    978384 9gae:H (3.0) BS01 U10 N/A GO:0003954 ... A1B487 N/A
    978385 9gae:H (3.0) BS02 DU0 N/A GO:0003954 ... A1B487 N/A
    978386 9gae:H (3.0) BS03 P5S N/A GO:0003954 ... A1B487 N/A
    978387 9gae:I (3.0) BS01 SF4 N/A GO:0003954 ... A1B486 N/A
    978388 9gae:I (3.0) BS02 SF4 N/A GO:0003954 ... A1B486 N/A
    978389 9gae:J (3.0) BS01 DU0 N/A GO:0005886 ... A1B483 N/A
    978390 9gae:J (3.0) BS02 T7X N/A GO:0005886 ... A1B483 N/A
    978391 9gae:L (3.0) BS01 P5S N/A GO:0003954 ... A1B481 N/A
    978392 9gae:M (3.0) BS01 DU0 N/A GO:0003954 ... A1B480 N/A
    978393 9gae:R (3.0) BS01 ZN N/A N/A A1B357 N/A
    978394 9gae:a (3.0) BS01 HEM N/A GO:0005886 ... A1B4F3 N/A
    978395 9gae:a (3.0) BS02 U10 N/A GO:0005886 ... A1B4F3 N/A
    978396 9gae:a (3.0) BS03 U10 N/A GO:0005886 ... A1B4F3 N/A
    978397 9gae:a (3.0) BS04 P5S N/A GO:0005886 ... A1B4F3 N/A
    978398 9gae:a (3.0) BS05 HEM N/A GO:0005886 ... A1B4F3 N/A
    978399 9gae:a (3.0) BS06 DU0 N/A GO:0005886 ... A1B4F3 N/A
    978400 9gae:a (3.0) BS07 U10 N/A GO:0005886 ... A1B4F3 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).