SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    978401 9gae:b (3.0) BS01 HEC N/A N/A A1B4F4 N/A
    978402 9gae:b (3.0) BS02 CA N/A N/A A1B4F4 N/A
    978403 9gae:c (3.0) BS01 DU0 N/A GO:0005886 ... A1B4F2 N/A
    978404 9gae:c (3.0) BS02 FES N/A GO:0005886 ... A1B4F2 N/A
    978405 9gae:c (3.0) BS03 DU0 N/A GO:0005886 ... A1B4F2 N/A
    978406 9gae:d (3.0) BS01 U10 N/A GO:0005886 ... A1B4F3 N/A
    978407 9gae:d (3.0) BS02 U10 N/A GO:0005886 ... A1B4F3 N/A
    978408 9gae:d (3.0) BS03 HEM N/A GO:0005886 ... A1B4F3 N/A
    978409 9gae:d (3.0) BS04 HEM N/A GO:0005886 ... A1B4F3 N/A
    978410 9gae:e (3.0) BS01 CA N/A N/A A1B4F4 N/A
    978411 9gae:e (3.0) BS02 HEC N/A N/A A1B4F4 N/A
    978412 9gae:f (3.0) BS01 DU0 N/A GO:0005886 ... A1B4F2 N/A
    978413 9gae:f (3.0) BS02 FES N/A GO:0005886 ... A1B4F2 N/A
    978414 9gae:g (3.0) BS01 DU0 N/A GO:0004129 ... A1B3D7 N/A
    978415 9gae:g (3.0) BS02 DU0 N/A GO:0004129 ... A1B3D7 N/A
    978416 9gae:g (3.0) BS03 HEA N/A GO:0004129 ... A1B3D7 N/A
    978417 9gae:g (3.0) BS04 CA N/A GO:0004129 ... A1B3D7 N/A
    978418 9gae:g (3.0) BS05 CU N/A GO:0004129 ... A1B3D7 N/A
    978419 9gae:g (3.0) BS06 HEA N/A GO:0004129 ... A1B3D7 N/A
    978420 9gae:g (3.0) BS07 MN N/A GO:0004129 ... A1B3D7 N/A
    978421 9gae:g (3.0) BS08 DU0 N/A GO:0004129 ... A1B3D7 N/A
    978422 9gae:g (3.0) BS09 DU0 N/A GO:0004129 ... A1B3D7 N/A
    978423 9gae:h (3.0) BS01 T7X N/A N/A A1BA41 N/A
    978424 9gae:h (3.0) BS02 DU0 N/A N/A A1BA41 N/A
    978425 9gae:h (3.0) BS03 DU0 N/A N/A A1BA41 N/A
    978426 9gae:h (3.0) BS04 CUA N/A N/A A1BA41 N/A
    978427 9gae:i (3.0) BS01 DU0 N/A GO:0004129 ... A1BA37 N/A
    978428 9gae:i (3.0) BS02 ZN N/A GO:0004129 ... A1BA37 N/A
    978429 9gae:i (3.0) BS03 DU0 N/A GO:0004129 ... A1BA37 N/A
    978430 9gae:j (3.0) BS01 DU0 N/A N/A A1AZ52 N/A
    978431 9gae:j (3.0) BS02 DU0 N/A N/A A1AZ52 N/A
    978432 9gae:k (3.0) BS01 CA N/A GO:0004129 ... A1B3D7 N/A
    978433 9gae:k (3.0) BS02 HEA N/A GO:0004129 ... A1B3D7 N/A
    978434 9gae:k (3.0) BS03 HEA N/A GO:0004129 ... A1B3D7 N/A
    978435 9gae:k (3.0) BS04 CU N/A GO:0004129 ... A1B3D7 N/A
    978436 9gae:k (3.0) BS05 MN N/A GO:0004129 ... A1B3D7 N/A
    978437 9gae:l (3.0) BS01 CUA N/A N/A A1BA41 N/A
    978438 9gae:m (3.0) BS01 DU0 N/A GO:0004129 ... A1BA37 N/A
    978439 9gae:m (3.0) BS02 ZN N/A GO:0004129 ... A1BA37 N/A
    978440 9gaf:A (1.9) BS01 GLY 3.5.1.26 GO:0003948 ... Q47898 10490104
    978441 9gaf:C (1.9) BS01 GLY 3.5.1.26 GO:0003948 ... Q47898 10490104
    978442 9gag:A (-1.00) BS01 peptide N/A N/A P50542 N/A
    978443 9gai:A (1.9) BS01 SF4 N/A N/A N/A N/A
    978444 9gai:B (1.9) BS01 SF4 N/A N/A N/A N/A
    978445 9gai:B (1.9) BS02 MG N/A N/A N/A N/A
    978446 9gai:C (1.9) BS01 ATP N/A N/A N/A N/A
    978447 9gai:C (1.9) BS02 SF4 N/A N/A N/A N/A
    978448 9gai:D (1.9) BS01 SF4 N/A N/A N/A N/A
    978449 9gai:D (1.9) BS02 ADP N/A N/A N/A N/A
    978450 9gai:E (1.9) BS01 SF4 N/A N/A N/A N/A
    978451 9gai:E (1.9) BS02 MG N/A N/A N/A N/A
    978452 9gai:F (1.9) BS01 SF4 N/A N/A N/A N/A
    978453 9gai:F (1.9) BS02 MG N/A N/A N/A N/A
    978454 9gai:G (1.9) BS01 ATP N/A N/A N/A N/A
    978455 9gai:G (1.9) BS02 SF4 N/A N/A N/A N/A
    978456 9gai:H (1.9) BS01 SF4 N/A N/A N/A N/A
    978457 9gai:H (1.9) BS02 ADP N/A N/A N/A N/A
    978458 9gai:I (1.9) BS01 SF4 N/A N/A N/A N/A
    978459 9gai:J (1.9) BS01 SF4 N/A N/A N/A N/A
    978460 9gai:K (1.9) BS01 ATP N/A N/A N/A N/A
    978461 9gai:K (1.9) BS02 SF4 N/A N/A N/A N/A
    978462 9gai:L (1.9) BS01 SF4 N/A N/A N/A N/A
    978463 9gai:L (1.9) BS02 ADP N/A N/A N/A N/A
    978464 9gai:M (1.9) BS01 SF4 N/A N/A N/A N/A
    978465 9gai:N (1.9) BS01 SF4 N/A N/A N/A N/A
    978466 9gai:N (1.9) BS02 MG N/A N/A N/A N/A
    978467 9gai:O (1.9) BS01 ATP N/A N/A N/A N/A
    978468 9gai:O (1.9) BS02 SF4 N/A N/A N/A N/A
    978469 9gai:P (1.9) BS01 SF4 N/A N/A N/A N/A
    978470 9gai:P (1.9) BS02 ADP N/A N/A N/A N/A
    978471 9gaj:A (1.64) BS01 peptide N/A GO:0004064 ... P00918 N/A
    978472 9gaj:A (1.64) BS02 ZN N/A GO:0004064 ... P00918 N/A
    978473 9gak:A (2.11) BS01 peptide N/A GO:0004064 ... P00918 N/A
    978474 9gak:A (2.11) BS02 ZN N/A GO:0004064 ... P00918 N/A
    978475 9gal:A (2.15) BS01 SF4 N/A N/A N/A N/A
    978476 9gal:B (2.15) BS01 SF4 N/A N/A N/A N/A
    978477 9gal:C (2.15) BS01 ATP N/A N/A N/A N/A
    978478 9gal:C (2.15) BS02 SF4 N/A N/A N/A N/A
    978479 9gal:D (2.15) BS01 SF4 N/A N/A N/A N/A
    978480 9gal:D (2.15) BS02 ADP N/A N/A N/A N/A
    978481 9gal:E (2.15) BS01 SF4 N/A N/A N/A N/A
    978482 9gal:F (2.15) BS01 SF4 N/A N/A N/A N/A
    978483 9gal:G (2.15) BS01 ATP N/A N/A N/A N/A
    978484 9gal:G (2.15) BS02 SF4 N/A N/A N/A N/A
    978485 9gal:H (2.15) BS01 SF4 N/A N/A N/A N/A
    978486 9gal:H (2.15) BS02 ADP N/A N/A N/A N/A
    978487 9gal:I (2.15) BS01 SF4 N/A N/A N/A N/A
    978488 9gal:J (2.15) BS01 SF4 N/A N/A N/A N/A
    978489 9gal:K (2.15) BS01 ATP N/A N/A N/A N/A
    978490 9gal:K (2.15) BS02 SF4 N/A N/A N/A N/A
    978491 9gal:L (2.15) BS01 SF4 N/A N/A N/A N/A
    978492 9gal:L (2.15) BS02 ADP N/A N/A N/A N/A
    978493 9gal:M (2.15) BS01 SF4 N/A N/A N/A N/A
    978494 9gal:N (2.15) BS01 SF4 N/A N/A N/A N/A
    978495 9gal:O (2.15) BS01 ATP N/A N/A N/A N/A
    978496 9gal:O (2.15) BS02 SF4 N/A N/A N/A N/A
    978497 9gal:P (2.15) BS01 SF4 N/A N/A N/A N/A
    978498 9gal:P (2.15) BS02 ADP N/A N/A N/A N/A
    978499 9gam:A (1.4) BS01 peptide N/A GO:0004064 ... P00918 N/A
    978500 9gam:A (1.4) BS02 ZN N/A GO:0004064 ... P00918 N/A
    978501 9gan:A (3.32) BS01 rna N/A GO:0003723 ... A0A516TQ93 39673795
    978502 9gan:A (3.32) BS02 rna N/A GO:0003723 ... A0A516TQ93 39673795
    978503 9gan:A (3.32) BS03 peptide N/A GO:0003723 ... A0A516TQ93 39673795
    978504 9gan:A (3.32) BS04 A1IJK N/A GO:0003723 ... A0A516TQ93 39673795
    978505 9gao:A (1.95) BS01 A1IJM N/A N/A Q96SW2 39406745
    978506 9gao:A (1.95) BS02 ZN N/A N/A Q96SW2 39406745
    978507 9gao:C (1.95) BS01 A1IJM N/A N/A Q96SW2 39406745
    978508 9gao:C (1.95) BS02 ZN N/A N/A Q96SW2 39406745
    978509 9gap:A (4.0) BS01 rna N/A GO:0003723 ... A0A516TQ93 39673795
    978510 9gap:A (4.0) BS02 rna N/A GO:0003723 ... A0A516TQ93 39673795
    978511 9gap:A (4.0) BS03 peptide N/A GO:0003723 ... A0A516TQ93 39673795
    978512 9gap:A (4.0) BS04 A1IJK N/A GO:0003723 ... A0A516TQ93 39673795
    978513 9gaq:A (3.6) BS01 rna N/A GO:0003723 ... P15682 39673795
    978514 9gaq:A (3.6) BS02 rna N/A GO:0003723 ... P15682 39673795
    978515 9gaq:A (3.6) BS03 peptide N/A GO:0003723 ... P15682 39673795
    978516 9gas:A (3.08) BS01 rna N/A GO:0003723 ... A0A516TQ93 39673795
    978517 9gas:A (3.08) BS02 rna N/A GO:0003723 ... A0A516TQ93 39673795
    978518 9gas:A (3.08) BS03 peptide N/A GO:0003723 ... A0A516TQ93 39673795
    978519 9gat:A (3.2) BS01 rna N/A GO:0003723 ... A0A516TQ93 39673795
    978520 9gat:A (3.2) BS02 rna N/A GO:0003723 ... A0A516TQ93 39673795
    978521 9gat:A (3.2) BS03 A1IJK N/A GO:0003723 ... A0A516TQ93 39673795
    978522 9gat:B (3.2) BS01 rna N/A GO:0003723 ... A0A516TQ93 39673795
    978523 9gat:B (3.2) BS02 rna N/A GO:0003723 ... A0A516TQ93 39673795
    978524 9gat:B (3.2) BS03 A1IJK N/A GO:0003723 ... A0A516TQ93 39673795
    978525 9gat:C (3.2) BS01 rna N/A GO:0003723 ... A0A516TQ93 39673795
    978526 9gat:C (3.2) BS02 rna N/A GO:0003723 ... A0A516TQ93 39673795
    978527 9gat:C (3.2) BS03 peptide N/A GO:0003723 ... A0A516TQ93 39673795
    978528 9gat:C (3.2) BS04 A1IJK N/A GO:0003723 ... A0A516TQ93 39673795
    978529 9gat:I (3.2) BS01 rna N/A GO:0003723 ... A0A516TQ93 39673795
    978530 9gat:I (3.2) BS02 rna N/A GO:0003723 ... A0A516TQ93 39673795
    978531 9gat:I (3.2) BS03 A1IJK N/A GO:0003723 ... A0A516TQ93 39673795
    978532 9gat:J (3.2) BS01 rna N/A GO:0003723 ... A0A516TQ93 39673795
    978533 9gat:J (3.2) BS02 rna N/A GO:0003723 ... A0A516TQ93 39673795
    978534 9gat:J (3.2) BS03 A1IJK N/A GO:0003723 ... A0A516TQ93 39673795
    978535 9gat:K (3.2) BS01 peptide N/A GO:0003723 ... A0A516TQ93 39673795
    978536 9gat:K (3.2) BS02 rna N/A GO:0003723 ... A0A516TQ93 39673795
    978537 9gat:K (3.2) BS03 rna N/A GO:0003723 ... A0A516TQ93 39673795
    978538 9gat:K (3.2) BS04 A1IJK N/A GO:0003723 ... A0A516TQ93 39673795
    978539 9gav:A (3.04) BS01 rna N/A GO:0003723 ... A0A516TQ93 39673795
    978540 9gav:A (3.04) BS02 rna N/A GO:0003723 ... A0A516TQ93 39673795
    978541 9gav:A (3.04) BS03 A1IJK N/A GO:0003723 ... A0A516TQ93 39673795
    978542 9gav:B (3.04) BS01 peptide N/A GO:0003723 ... A0A516TQ93 39673795
    978543 9gav:B (3.04) BS02 rna N/A GO:0003723 ... A0A516TQ93 39673795
    978544 9gav:B (3.04) BS03 rna N/A GO:0003723 ... A0A516TQ93 39673795
    978545 9gav:B (3.04) BS04 A1IJK N/A GO:0003723 ... A0A516TQ93 39673795
    978546 9gaw:C (2.9) BS01 ZN N/A GO:0000278 ... Q9NYG5 39567505
    978547 9gaw:C (2.9) BS02 ZN N/A GO:0000278 ... Q9NYG5 39567505
    978548 9gaw:C (2.9) BS03 ZN N/A GO:0000278 ... Q9NYG5 39567505
    978549 9gaw:K (2.9) BS01 peptide N/A GO:0005515 ... Q13042 39567505
    978550 9gaw:N (2.9) BS01 ZN N/A GO:0005515 ... Q9UJX6 39567505
    978551 9gaw:Q (2.9) BS01 peptide N/A GO:0005515 ... Q13042 39567505
    978552 9gaw:S (2.9) BS01 ZN N/A GO:0005515 ... Q9UKT4 39567505
    978553 9gaw:S (2.9) BS02 ZN N/A GO:0005515 ... Q9UKT4 39567505
    978554 9gax:A (1.93) BS01 A1IJL N/A N/A P28347 39704449
    978555 9gax:B (1.93) BS01 A1IJL N/A N/A P28347 39704449
    978556 9gba:A (3.0) BS01 SF4 N/A N/A N/A N/A
    978557 9gba:B (3.0) BS01 SF4 N/A N/A N/A N/A
    978558 9gba:C (3.0) BS01 ATP N/A N/A N/A N/A
    978559 9gba:C (3.0) BS02 SF4 N/A N/A N/A N/A
    978560 9gba:D (3.0) BS01 SF4 N/A N/A N/A N/A
    978561 9gba:D (3.0) BS02 ANP N/A N/A N/A N/A
    978562 9gba:E (3.0) BS01 SF4 N/A N/A N/A N/A
    978563 9gba:F (3.0) BS01 SF4 N/A N/A N/A N/A
    978564 9gba:G (3.0) BS01 ATP N/A N/A N/A N/A
    978565 9gba:G (3.0) BS02 SF4 N/A N/A N/A N/A
    978566 9gba:H (3.0) BS01 SF4 N/A N/A N/A N/A
    978567 9gba:H (3.0) BS02 ANP N/A N/A N/A N/A
    978568 9gbb:A (2.6) BS01 C8E N/A N/A Q9I2J4 N/A
    978569 9gbb:A (2.6) BS02 A1IJR N/A N/A Q9I2J4 N/A
    978570 9gbb:B (2.6) BS01 A1IJR N/A N/A Q9I2J4 N/A
    978571 9gbb:B (2.6) BS02 C8E N/A N/A Q9I2J4 N/A
    978572 9gbb:B (2.6) BS03 C8E N/A N/A Q9I2J4 N/A
    978573 9gbe:A (1.58) BS01 A1IJ8 N/A GO:0004672 ... Q9UM73 39269178
    978574 9gbf:A (1.76) BS01 ZN N/A N/A O96028 39656918
    978575 9gbf:A (1.76) BS02 ZN N/A N/A O96028 39656918
    978576 9gbf:A (1.76) BS03 ZN N/A N/A O96028 39656918
    978577 9gbf:A (1.76) BS04 ZN N/A N/A O96028 39656918
    978578 9gbf:B (1.76) BS01 ZN N/A N/A O96028 39656918
    978579 9gbf:B (1.76) BS02 ZN N/A N/A O96028 39656918
    978580 9gbf:B (1.76) BS03 ZN N/A N/A O96028 39656918
    978581 9gbf:B (1.76) BS04 ZN N/A N/A O96028 39656918
    978582 9gbh:AAA (2.375) BS01 A1IJV N/A GO:0002003 ... P23946 39541507
    978583 9gbh:AAA (2.375) BS02 ZN N/A GO:0002003 ... P23946 39541507
    978584 9gbi:1 (3.13) BS01 CHL N/A GO:0009765 ... Q01667 40955088
    978585 9gbi:1 (3.13) BS02 CLA N/A GO:0009765 ... Q01667 40955088
    978586 9gbi:1 (3.13) BS03 CLA N/A GO:0009765 ... Q01667 40955088
    978587 9gbi:1 (3.13) BS04 CLA N/A GO:0009765 ... Q01667 40955088
    978588 9gbi:1 (3.13) BS05 CLA N/A GO:0009765 ... Q01667 40955088
    978589 9gbi:1 (3.13) BS06 CHL N/A GO:0009765 ... Q01667 40955088
    978590 9gbi:1 (3.13) BS07 CLA N/A GO:0009765 ... Q01667 40955088
    978591 9gbi:1 (3.13) BS08 CLA N/A GO:0009765 ... Q01667 40955088
    978592 9gbi:1 (3.13) BS09 CLA N/A GO:0009765 ... Q01667 40955088
    978593 9gbi:1 (3.13) BS10 CLA N/A GO:0009765 ... Q01667 40955088
    978594 9gbi:1 (3.13) BS11 CLA N/A GO:0009765 ... Q01667 40955088
    978595 9gbi:1 (3.13) BS12 CLA N/A GO:0009765 ... Q01667 40955088
    978596 9gbi:1 (3.13) BS13 CLA N/A GO:0009765 ... Q01667 40955088
    978597 9gbi:1 (3.13) BS14 CLA N/A GO:0009765 ... Q01667 40955088
    978598 9gbi:1 (3.13) BS15 XAT N/A GO:0009765 ... Q01667 40955088
    978599 9gbi:2 (3.13) BS01 CHL N/A GO:0009765 ... Q9SYW8 40955088
    978600 9gbi:2 (3.13) BS02 CLA N/A GO:0009765 ... Q9SYW8 40955088

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).